ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd23a05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1IBB_PHAAT (P83311) Bowman-Birk type proteinase inhibitor (TBPI-B) 32 0.42
2IBB1_PHAAN (P01058) Bowman-Birk type proteinase inhibitor 30 1.2
3IBB4_DOLAX (P01059) Bowman-Birk type proteinase inhibitor DE-4 30 1.2
4IBB2_PHAVU (P01060) Bowman-Birk type proteinase inhibitor 2 (Bow... 29 2.7
5LCE1F_HUMAN (Q5T754) Late cornified envelope protein 1F (Late en... 29 2.7
6LCE1E_HUMAN (Q5T753) Late cornified envelope protein 1E (Late en... 29 2.7
7LCE1C_HUMAN (Q5T751) Late cornified envelope protein 1C (Late en... 29 2.7
8LCE1A_HUMAN (Q5T7P2) Late cornified envelope protein 1A (Late en... 29 2.7
9IBB_DOLBI (Q9S9E3) Horsegram inhibitor 1 (Horsegram inhibitor I)... 29 2.7
10IBBC2_SOYBN (P01063) Bowman-Birk type proteinase inhibitor C-II ... 29 3.6
11DB118_MACMU (Q95LI0) Beta-defensin 118 precursor (Defensin, beta... 29 3.6
12IBB2_PHAAN (P01061) Bowman-Birk type proteinase inhibitors I-A, ... 29 3.6
13DLLA_BRARE (Q6DI48) Delta-like protein A precursor (DeltaA protein) 28 4.7
14IBB_VIGUN (P17734) Bowman-Birk type seed trypsin and chymotrypsi... 28 6.1
15IBB_PHALU (P01056) Bowman-Birk type proteinase inhibitor 28 6.1
16IBB_MEDSC (P80321) Bowman-Birk type proteinase inhibitor (MSTI) 28 6.1
17HYPD_RHOCA (P26411) Hydrogenase expression/formation protein hypD 28 6.1
18IBB3_DOLAX (P01057) Bowman-Birk type proteinase inhibitor DE-3 28 6.1
19MAK5_SCHPO (O74393) ATP-dependent RNA helicase mak5 (EC 3.6.1.-) 28 8.0
20HIS3_NITEU (Q82WM6) Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.... 28 8.0

>IBB_PHAAT (P83311) Bowman-Birk type proteinase inhibitor (TBPI-B)|
          Length = 80

 Score = 32.0 bits (71), Expect = 0.42
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = -2

Query: 169 NEAAMETRQSHRACCSMKRCSSSLPPRCGAPLPL 68
           ++++ E  +S +ACC    C+ S+PP+C   L L
Sbjct: 6   HDSSDEPSESSKACCDHCACTKSIPPQCRCALRL 39



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>IBB1_PHAAN (P01058) Bowman-Birk type proteinase inhibitor|
          Length = 82

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -2

Query: 169 NEAAMETRQSHRACCSMKRCSSSLPPRC 86
           +E   E  +S + CC    C+ S+PP+C
Sbjct: 5   DETTDEPSESSKPCCDQCSCTKSMPPKC 32



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>IBB4_DOLAX (P01059) Bowman-Birk type proteinase inhibitor DE-4|
          Length = 76

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = -2

Query: 154 ETRQSHRACCSMKRCSSSLPPRC 86
           E+ +S + CC +  C+ S+PP+C
Sbjct: 7   ESSESSKPCCDLCTCTKSIPPQC 29



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>IBB2_PHAVU (P01060) Bowman-Birk type proteinase inhibitor 2 (Bowman-Birk type|
           proteinase inhibitor II)
          Length = 79

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 8/28 (28%), Positives = 19/28 (67%)
 Frame = -2

Query: 169 NEAAMETRQSHRACCSMKRCSSSLPPRC 86
           ++++ +  +S   CC +  C++S+PP+C
Sbjct: 4   BBSSZZPSZSSPPCCBICVCTASIPPQC 31



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>LCE1F_HUMAN (Q5T754) Late cornified envelope protein 1F (Late envelope protein|
           6)
          Length = 118

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = -2

Query: 157 METRQSHRACCSMKRCSSSLPPRCGAPLPLINFPPLC 47
           M  +QS + C    +C+   PP+C  P      PP C
Sbjct: 1   MSCQQSQQQCQPPPKCTPKCPPKCPTPKCPPKCPPKC 37



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>LCE1E_HUMAN (Q5T753) Late cornified envelope protein 1E (Late envelope protein|
           5)
          Length = 118

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = -2

Query: 157 METRQSHRACCSMKRCSSSLPPRCGAPLPLINFPPLC 47
           M  +QS + C    +C+   PP+C  P      PP C
Sbjct: 1   MSCQQSQQQCQPPPKCTPKCPPKCPTPKCPPKCPPKC 37



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>LCE1C_HUMAN (Q5T751) Late cornified envelope protein 1C (Late envelope protein|
           3)
          Length = 118

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = -2

Query: 157 METRQSHRACCSMKRCSSSLPPRCGAPLPLINFPPLC 47
           M  +QS + C    +C+   PP+C  P      PP C
Sbjct: 1   MSCQQSQQQCQPPPKCTPKCPPKCPTPKCPPKCPPKC 37



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>LCE1A_HUMAN (Q5T7P2) Late cornified envelope protein 1A (Late envelope protein|
           1)
          Length = 110

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = -2

Query: 157 METRQSHRACCSMKRCSSSLPPRCGAPLPLINFPPLC 47
           M  +QS + C    +C+   PP+C  P      PP C
Sbjct: 1   MSCQQSQQQCQPPPKCTPKCPPKCPTPKCPPKCPPKC 37



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>IBB_DOLBI (Q9S9E3) Horsegram inhibitor 1 (Horsegram inhibitor I) (Bowman-Birk|
           type proteinase inhibitor HGI-I) [Contains: Horsegram
           germinated inhibitor 1 (Horsegram germinated inhibitor
           I) (HGGI-I); Horsegram germinated inhibitor 2 (Horsegram
           germinated
          Length = 76

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = -2

Query: 169 NEAAMETRQSHRACCSMKRCSSSLPPRC 86
           +++  E  +S + CC    C+ S+PP+C
Sbjct: 3   HQSTDEPSESSKPCCDQCTCTKSIPPQC 30



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>IBBC2_SOYBN (P01063) Bowman-Birk type proteinase inhibitor C-II precursor|
          Length = 83

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 8/20 (40%), Positives = 15/20 (75%)
 Frame = -2

Query: 145 QSHRACCSMKRCSSSLPPRC 86
           +S + CC +  C++S+PP+C
Sbjct: 16  ESSKPCCDLCMCTASMPPQC 35



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>DB118_MACMU (Q95LI0) Beta-defensin 118 precursor (Defensin, beta 118)|
           (Epididymal secretory protein 13.6) (ESP13.6)
          Length = 123

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 13/29 (44%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
 Frame = -2

Query: 205 CWEEXXHYL*Q--QNEAAMETRQSHRACC 125
           CW    H   Q    EA  ET ++HRACC
Sbjct: 27  CWNRSGHCRKQCKDGEAVKETCKNHRACC 55



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>IBB2_PHAAN (P01061) Bowman-Birk type proteinase inhibitors I-A, I-B, and I-A'|
          Length = 78

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = -2

Query: 166 EAAMETRQSHRACCSMKRCSSSLPPRC 86
           +++ E  +S   CC +  C+ S+PP+C
Sbjct: 6   DSSDEPSESSHPCCDLCLCTKSIPPQC 32



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>DLLA_BRARE (Q6DI48) Delta-like protein A precursor (DeltaA protein)|
          Length = 772

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +3

Query: 96  GSDDEHRFIEQHARCDCLVSIAASFC 173
           G D+EH F E+   C C V     +C
Sbjct: 231 GCDEEHGFCEKPGECKCRVGFKGRYC 256



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>IBB_VIGUN (P17734) Bowman-Birk type seed trypsin and chymotrypsin inhibitor|
           (BTCI)
          Length = 83

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -2

Query: 154 ETRQSHRACCSMKRCSSSLPPRC 86
           +  +S + CC    C+ S+PP C
Sbjct: 10  ZASZSSKPCCRZCACTKSIPPZC 32



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>IBB_PHALU (P01056) Bowman-Birk type proteinase inhibitor|
          Length = 83

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -2

Query: 154 ETRQSHRACCSMKRCSSSLPPRC 86
           +  +S + CC    C+ S+PP+C
Sbjct: 10  ZPSZSSKPCCBHCACTKSIPPQC 32



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>IBB_MEDSC (P80321) Bowman-Birk type proteinase inhibitor (MSTI)|
          Length = 62

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -2

Query: 151 TRQSHRACCSMKRCSSSLPPRC 86
           T+ +  ACC    C+ S+PP+C
Sbjct: 1   TKSTTTACCDFCPCTRSIPPQC 22



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>HYPD_RHOCA (P26411) Hydrogenase expression/formation protein hypD|
          Length = 377

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 7/35 (20%)
 Frame = +3

Query: 3   HQRHYCVSHTHSLY-------VHNGGKFIRGKGAP 86
           H    C  HTHS++       +H G +FI G G P
Sbjct: 36  HIMEICGGHTHSIFRYGLDKLIHPGIEFIHGPGCP 70



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>IBB3_DOLAX (P01057) Bowman-Birk type proteinase inhibitor DE-3|
          Length = 76

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -2

Query: 154 ETRQSHRACCSMKRCSSSLPPRC 86
           E  +S + CC    C+ S+PP+C
Sbjct: 8   EPSESSKPCCDECACTKSIPPQC 30



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>MAK5_SCHPO (O74393) ATP-dependent RNA helicase mak5 (EC 3.6.1.-)|
          Length = 648

 Score = 27.7 bits (60), Expect = 8.0
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +3

Query: 3   HQRHYCVSHTHSLYVHNGGKFIR 71
           H  HY V HT  +YVH  G+  R
Sbjct: 460 HVIHYHVPHTADMYVHRSGRTAR 482



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>HIS3_NITEU (Q82WM6) Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) (PRA-CH)|
          Length = 129

 Score = 27.7 bits (60), Expect = 8.0
 Identities = 10/39 (25%), Positives = 19/39 (48%)
 Frame = -3

Query: 192 KXIIYSNKMKQQWRRDSHIGHAAR*SGVHHRCRPGVVLL 76
           + + +S   K+ W +    GH  + S +H  C   ++LL
Sbjct: 48  EAVYWSRSRKKLWHKGEESGHTQKISAIHLDCDEDILLL 86


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,841,252
Number of Sequences: 219361
Number of extensions: 617546
Number of successful extensions: 1613
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1576
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1611
length of database: 80,573,946
effective HSP length: 66
effective length of database: 66,096,120
effective search space used: 1586306880
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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