>XERC_AGRT5 (Q8UC70) Tyrosine recombinase xerC|
          Length = 315

 Score = 28.9 bits (63), Expect = 5.2
 Identities = 13/27 (48%), Positives = 14/27 (51%)
 Frame = -1

Query: 383 GARQEPQQRVPHVLRHRAARHRWEGGG 303
           GA   P+   PH LRH  A H   GGG
Sbjct: 250 GAFGLPENATPHALRHSFATHLLAGGG 276

>ENV_SRV2R (P51520) Env polyprotein (Coat polyprotein) [Contains: Coat protein|
           GP70; Coat protein GP20]
          Length = 574

 Score = 28.9 bits (63), Expect = 5.2
 Identities = 12/26 (46%), Positives = 19/26 (73%)
 Frame = +2

Query: 233 LLPALELVDAEGDEPIPVPALEQHPH 310
           LLP +++V   GD P+PVPA++ + H
Sbjct: 355 LLPDIDIVP--GDAPVPVPAIDHYLH 378

>ENV_SRV2 (P51515) Env polyprotein (Coat polyprotein) [Contains: Coat protein|
           GP70; Coat protein GP20]
          Length = 574

 Score = 28.9 bits (63), Expect = 5.2
 Identities = 12/26 (46%), Positives = 19/26 (73%)
 Frame = +2

Query: 233 LLPALELVDAEGDEPIPVPALEQHPH 310
           LLP +++V   GD P+PVPA++ + H
Sbjct: 355 LLPDIDIVP--GDAPVPVPAIDHYLH 378

>ENV_BAEVM (P10269) Env polyprotein precursor (Coat polyprotein) [Contains:|
           Outer membrane protein GP70; Transmembrane protein p20E]
          Length = 563

 Score = 28.9 bits (63), Expect = 5.2
 Identities = 11/28 (39%), Positives = 20/28 (71%)
 Frame = +2

Query: 233 LLPALELVDAEGDEPIPVPALEQHPHLP 316
           LLP ++++   GDEP+P+PA++   + P
Sbjct: 349 LLPDIDIIP--GDEPVPIPAIDHFIYRP 374


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,086,472
Number of Sequences: 219361
Number of extensions: 619920
Number of successful extensions: 2166
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2112
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2162
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2286875994
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)