Clone Name | rbasd23a04 |
---|---|
Clone Library Name | barley_pub |
>THIJ_ECOLI (Q46948) Protein thiJ| Length = 196 Score = 63.9 bits (154), Expect = 5e-10 Identities = 35/83 (42%), Positives = 48/83 (57%), Gaps = 2/83 (2%) Frame = -1 Query: 710 AICASPAHVLEPHGLLKGKKATAFPPMAHLLTDQSLCENRVVIDGN--LITSRAPGTATE 537 AICA+PA VL PH + T FP + + + + RVV D L+TS+ PGTA + Sbjct: 104 AICAAPATVLVPHDIFPIGNMTGFPTLKDKIPAEQWLDKRVVWDARVKLLTSQGPGTAID 163 Query: 536 FALAIVEKLFGREKAVGIAKEFV 468 F L I++ L GREKA +A + V Sbjct: 164 FGLKIIDLLVGREKAHEVASQLV 186
>THIJ_SALTY (P55880) Protein thiJ| Length = 196 Score = 60.5 bits (145), Expect = 5e-09 Identities = 34/83 (40%), Positives = 47/83 (56%), Gaps = 2/83 (2%) Frame = -1 Query: 710 AICASPAHVLEPHGLLKGKKATAFPPMAHLLTDQSLCENRVVIDGN--LITSRAPGTATE 537 AICA+ A VL PH + T FP + + + + RVV D L+TS+ PGTA + Sbjct: 104 AICAAAATVLVPHDIFPIGNMTGFPALKDKIPAEQWLDKRVVWDARVKLLTSQGPGTAID 163 Query: 536 FALAIVEKLFGREKAVGIAKEFV 468 F L I++ L GREKA +A + V Sbjct: 164 FGLKIIDLLAGREKAHEVASQLV 186
>PARK7_HUMAN (Q99497) Protein DJ-1 (Oncogene DJ1)| Length = 189 Score = 55.1 bits (131), Expect = 2e-07 Identities = 36/84 (42%), Positives = 46/84 (54%), Gaps = 3/84 (3%) Frame = -1 Query: 710 AICASPAHVLEPHGLLKGKKATAFPPMAHLLTD---QSLCENRVVIDGNLITSRAPGTAT 540 AICA P +L H + G K T P + + + ENRV DG ++TSR PGT+ Sbjct: 104 AICAGPTALLA-HEIGFGSKVTTHPLAKDKMMNGGHYTYSENRVEKDGLILTSRGPGTSF 162 Query: 539 EFALAIVEKLFGREKAVGIAKEFV 468 EFALAIVE L G+E A + V Sbjct: 163 EFALAIVEALNGKEVAAQVKAPLV 186
>PARK7_RAT (O88767) Protein DJ-1 (Contraception-associated protein 1) (CAP1| protein) (Fertility protein SP22) Length = 189 Score = 52.0 bits (123), Expect = 2e-06 Identities = 34/76 (44%), Positives = 45/76 (59%), Gaps = 3/76 (3%) Frame = -1 Query: 710 AICASPAHVLEPHGLLKGKKATAFPPMAHLLTD---QSLCENRVVIDGNLITSRAPGTAT 540 AICA P +L H + G K T+ P + + S E+RV DG ++TSR PGT+ Sbjct: 104 AICAGPTALLA-HEVGFGCKVTSHPLAKDKMMNGSHYSYSESRVEKDGLILTSRGPGTSF 162 Query: 539 EFALAIVEKLFGREKA 492 EFALAIVE L G++ A Sbjct: 163 EFALAIVEALSGKDMA 178
>PARK7_MOUSE (Q99LX0) Protein DJ-1| Length = 189 Score = 52.0 bits (123), Expect = 2e-06 Identities = 34/76 (44%), Positives = 44/76 (57%), Gaps = 3/76 (3%) Frame = -1 Query: 710 AICASPAHVLEPHGLLKGKKATAFPPMAHLLTD---QSLCENRVVIDGNLITSRAPGTAT 540 AICA P +L H + G K T P + + S E+RV DG ++TSR PGT+ Sbjct: 104 AICAGPTALLA-HEVGFGCKVTTHPLAKDKMMNGSHYSYSESRVEKDGLILTSRGPGTSF 162 Query: 539 EFALAIVEKLFGREKA 492 EFALAIVE L G++ A Sbjct: 163 EFALAIVEALVGKDMA 178
>Y967_METJA (Q58377) Hypothetical protein MJ0967| Length = 205 Score = 48.5 bits (114), Expect = 2e-05 Identities = 30/71 (42%), Positives = 45/71 (63%), Gaps = 4/71 (5%) Frame = -1 Query: 710 AICASPAHVLEPHGLLKGKKATAFPP---MAHLLTDQSLCENR-VVIDGNLITSRAPGTA 543 AIC SP VL G+LKGKKAT +P + L ++ E+R VV+DGN+IT+++P A Sbjct: 131 AICLSPV-VLARAGILKGKKATVYPAPEAIEELKKAGAIYEDRGVVVDGNVITAKSPDYA 189 Query: 542 TEFALAIVEKL 510 F L +++ + Sbjct: 190 RLFGLEVLKAI 200
>PFPI_PYRAB (Q9V1F8) Intracellular protease 1 (EC 3.2.-.-) (Intracellular| protease I) Length = 166 Score = 38.1 bits (87), Expect = 0.027 Identities = 19/59 (32%), Positives = 35/59 (59%), Gaps = 2/59 (3%) Frame = -1 Query: 719 PYGAICASPAHVLEPHGLLKGKKATAFPPMAHLLTDQSL--CENRVVIDGNLITSRAPG 549 P +IC P +L G+L+G++ T++P + + + + + VV+DGN ++SR PG Sbjct: 95 PVASICHGP-QILISAGVLRGRRGTSYPGIKDDMINAGVDWVDAEVVVDGNWVSSRVPG 152
>Y029_MYCGE (P47275) Hypothetical protein MG029| Length = 186 Score = 37.4 bits (85), Expect = 0.047 Identities = 22/64 (34%), Positives = 36/64 (56%) Frame = -1 Query: 710 AICASPAHVLEPHGLLKGKKATAFPPMAHLLTDQSLCENRVVIDGNLITSRAPGTATEFA 531 AIC +P +VL HG++ + + P +L+ ++ +V + LIT+R+ G A EFA Sbjct: 100 AICDTP-NVLFKHGIITKDEIYSSFPNPNLVMSENRSTAKVTVANKLITARSAGCALEFA 158 Query: 530 LAIV 519 IV Sbjct: 159 TVIV 162
>PFPI_PYRHO (O59413) Intracellular protease 1 (EC 3.2.-.-) (Intracellular| protease I) Length = 166 Score = 37.0 bits (84), Expect = 0.061 Identities = 19/58 (32%), Positives = 34/58 (58%), Gaps = 2/58 (3%) Frame = -1 Query: 719 PYGAICASPAHVLEPHGLLKGKKATAFPPMAHLLTDQSL--CENRVVIDGNLITSRAP 552 P +IC P +L G+L+G+K T++P + + + + + VV+DGN ++SR P Sbjct: 95 PVASICHGP-QILISAGVLRGRKGTSYPGIKDDMINAGVEWVDAEVVVDGNWVSSRVP 151
>YDB3_SCHPO (Q10356) Hypothetical protein C22E12.03c in chromosome I| Length = 191 Score = 36.2 bits (82), Expect = 0.10 Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 2/65 (3%) Frame = -1 Query: 665 LKGKKATAFPPMAHLLTD--QSLCENRVVIDGNLITSRAPGTATEFALAIVEKLFGREKA 492 L K+ T P + L + + VV++ NLITS+ PGTA F L ++E++ ++K Sbjct: 122 LPNKQITGHPSVRGQLEEGGYKYLDQPVVLEENLITSQGPGTAMLFGLKLLEQVASKDKY 181 Query: 491 VGIAK 477 + K Sbjct: 182 NAVYK 186
>PFPI_PYRFU (Q51732) Intracellular protease 1 (EC 3.2.-.-) (Intracellular| protease I) Length = 166 Score = 36.2 bits (82), Expect = 0.10 Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 2/59 (3%) Frame = -1 Query: 719 PYGAICASPAHVLEPHGLLKGKKATAFPPMAHLLTDQSL--CENRVVIDGNLITSRAPG 549 P IC P +L G+LKG+K T++ + + + + + VV+DGN ++SR PG Sbjct: 95 PVATICHGP-QILISAGVLKGRKGTSYIGIRDDMINAGVEWIDREVVVDGNWVSSRHPG 152
>Y1560_STAES (Q8CRV8) Hypothetical protein SE_1560| Length = 172 Score = 34.7 bits (78), Expect = 0.30 Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 2/72 (2%) Frame = -1 Query: 719 PYGAICASPAHVLEPHGLLKGKKATAFPPMAHLLTDQ--SLCENRVVIDGNLITSRAPGT 546 P AIC P +++ L KG+ T + L++ ++ + VV+D N++TSR P Sbjct: 100 PTFAICHGPLVLVDTDDL-KGRTITGVINVRKDLSNAGANVVDESVVVDNNIVTSRVPDD 158 Query: 545 ATEFALAIVEKL 510 +F IV+KL Sbjct: 159 LDDFNREIVKKL 170
>Y1413_STAEQ (Q5HN59) Hypothetical protein SERP1413| Length = 172 Score = 34.7 bits (78), Expect = 0.30 Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 2/72 (2%) Frame = -1 Query: 719 PYGAICASPAHVLEPHGLLKGKKATAFPPMAHLLTDQ--SLCENRVVIDGNLITSRAPGT 546 P AIC P +++ L KG+ T + L++ ++ + VV+D N++TSR P Sbjct: 100 PTFAICHGPLVLVDTDDL-KGRTITGVINVRKDLSNAGANVVDESVVVDNNIVTSRVPDD 158 Query: 545 ATEFALAIVEKL 510 +F IV+KL Sbjct: 159 LDDFNREIVKKL 170
>YORF1_STAAU (P0A0K3) Hypothetical protein (ORF1)| Length = 171 Score = 34.7 bits (78), Expect = 0.30 Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 2/72 (2%) Frame = -1 Query: 719 PYGAICASPAHVLEPHGLLKGKKATAFPPMAHLLTDQS--LCENRVVIDGNLITSRAPGT 546 P AIC P +++ L KG+ TA + L++ + + VV+D N++TSR P Sbjct: 100 PTFAICHGPQILIDTDDL-KGRTLTAVLNVRKDLSNAGAHVVDESVVVDNNIVTSRVPDD 158 Query: 545 ATEFALAIVEKL 510 +F IV++L Sbjct: 159 LDDFNREIVKQL 170
>Y1965_STAAR (Q6GFI2) Hypothetical protein SAR1965| Length = 171 Score = 34.7 bits (78), Expect = 0.30 Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 2/72 (2%) Frame = -1 Query: 719 PYGAICASPAHVLEPHGLLKGKKATAFPPMAHLLTDQS--LCENRVVIDGNLITSRAPGT 546 P AIC P +++ L KG+ TA + L++ + + VV+D N++TSR P Sbjct: 100 PTFAICHGPQILIDTDDL-KGRTLTAVLNVRKDLSNAGAHVVDESVVVDNNIVTSRVPDD 158 Query: 545 ATEFALAIVEKL 510 +F IV++L Sbjct: 159 LDDFNREIVKQL 170
>Y1933_STAAC (Q5HEP9) Hypothetical protein SACOL1933| Length = 171 Score = 34.7 bits (78), Expect = 0.30 Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 2/72 (2%) Frame = -1 Query: 719 PYGAICASPAHVLEPHGLLKGKKATAFPPMAHLLTDQS--LCENRVVIDGNLITSRAPGT 546 P AIC P +++ L KG+ TA + L++ + + VV+D N++TSR P Sbjct: 100 PTFAICHGPQILIDTDDL-KGRTLTAVLNVRKDLSNAGAHVVDESVVVDNNIVTSRVPDD 158 Query: 545 ATEFALAIVEKL 510 +F IV++L Sbjct: 159 LDDFNREIVKQL 170
>Y1875_STAAM (P0A0K0) Hypothetical protein SAV1875| Length = 171 Score = 34.7 bits (78), Expect = 0.30 Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 2/72 (2%) Frame = -1 Query: 719 PYGAICASPAHVLEPHGLLKGKKATAFPPMAHLLTDQS--LCENRVVIDGNLITSRAPGT 546 P AIC P +++ L KG+ TA + L++ + + VV+D N++TSR P Sbjct: 100 PTFAICHGPQILIDTDDL-KGRTLTAVLNVRKDLSNAGAHVVDESVVVDNNIVTSRVPDD 158 Query: 545 ATEFALAIVEKL 510 +F IV++L Sbjct: 159 LDDFNREIVKQL 170
>Y1815_STAAW (P0A0K2) Hypothetical protein MW1815| Length = 171 Score = 34.7 bits (78), Expect = 0.30 Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 2/72 (2%) Frame = -1 Query: 719 PYGAICASPAHVLEPHGLLKGKKATAFPPMAHLLTDQS--LCENRVVIDGNLITSRAPGT 546 P AIC P +++ L KG+ TA + L++ + + VV+D N++TSR P Sbjct: 100 PTFAICHGPQILIDTDDL-KGRTLTAVLNVRKDLSNAGAHVVDESVVVDNNIVTSRVPDD 158 Query: 545 ATEFALAIVEKL 510 +F IV++L Sbjct: 159 LDDFNREIVKQL 170
>Y1797_STAAS (Q6G859) Hypothetical protein SAS1797| Length = 171 Score = 34.7 bits (78), Expect = 0.30 Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 2/72 (2%) Frame = -1 Query: 719 PYGAICASPAHVLEPHGLLKGKKATAFPPMAHLLTDQS--LCENRVVIDGNLITSRAPGT 546 P AIC P +++ L KG+ TA + L++ + + VV+D N++TSR P Sbjct: 100 PTFAICHGPQILIDTDDL-KGRTLTAVLNVRKDLSNAGAHVVDESVVVDNNIVTSRVPDD 158 Query: 545 ATEFALAIVEKL 510 +F IV++L Sbjct: 159 LDDFNREIVKQL 170
>Y1692_STAAN (P0A0K1) Hypothetical protein SA1692| Length = 171 Score = 34.7 bits (78), Expect = 0.30 Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 2/72 (2%) Frame = -1 Query: 719 PYGAICASPAHVLEPHGLLKGKKATAFPPMAHLLTDQS--LCENRVVIDGNLITSRAPGT 546 P AIC P +++ L KG+ TA + L++ + + VV+D N++TSR P Sbjct: 100 PTFAICHGPQILIDTDDL-KGRTLTAVLNVRKDLSNAGAHVVDESVVVDNNIVTSRVPDD 158 Query: 545 ATEFALAIVEKL 510 +F IV++L Sbjct: 159 LDDFNREIVKQL 170
>Y1625_STAS1 (Q49WT1) Hypothetical protein SSP1625| Length = 172 Score = 34.3 bits (77), Expect = 0.40 Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 2/72 (2%) Frame = -1 Query: 719 PYGAICASPAHVLEPHGLLKGKKATAFPPMAHLLTDQS--LCENRVVIDGNLITSRAPGT 546 P AIC P +++ L KG+ T + L++ + + VVID N++TSR P Sbjct: 100 PTFAICHGPLLLVDTDDL-KGRTITGVINVRKDLSNAGAHVVDESVVIDNNIVTSRVPDD 158 Query: 545 ATEFALAIVEKL 510 +F I++KL Sbjct: 159 LDDFNREIIKKL 170
>Y1281_ARCFU (O28987) Hypothetical protein AF1281| Length = 168 Score = 33.9 bits (76), Expect = 0.52 Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 2/72 (2%) Frame = -1 Query: 719 PYGAICASPAHVLEPHGLLKGKKATAFPPMAH-LLTDQSLCENR-VVIDGNLITSRAPGT 546 P AIC P ++ + KG++ T++ + L+ +L E+R VV+DGN+ITSR P Sbjct: 95 PVAAICHGPQLLISAMAV-KGRRMTSWIGIRDDLIAAGALYEDRPVVVDGNVITSRMPDD 153 Query: 545 ATEFALAIVEKL 510 F +++ L Sbjct: 154 LPYFCGELIKIL 165
>PFPI_PYRKO (Q5JGM7) Intracellular protease 1 (EC 3.2.-.-) (Intracellular| protease I) Length = 166 Score = 33.5 bits (75), Expect = 0.67 Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 2/59 (3%) Frame = -1 Query: 719 PYGAICASPAHVLEPHGLLKGKKATAFPPMAHLLTDQSL--CENRVVIDGNLITSRAPG 549 P +IC P +L G+LKG+K T+ + + + + VV+DGN ++SR PG Sbjct: 95 PVASICHGP-QILISAGVLKGRKGTSTVTIRDDVKNAGAEWIDAEVVVDGNWVSSRHPG 152
>VG24_ICHV1 (Q00123) Hypothetical gene 24 protein| Length = 333 Score = 32.7 bits (73), Expect = 1.2 Identities = 19/59 (32%), Positives = 30/59 (50%) Frame = +1 Query: 289 AHGKYVVHSL*TCLRYASVVPVNAHTVLTSAGMMYTEFWLSTQFALCTAHSTNSVCYHM 465 A+GK + L T +R V P +TVL SA ++ W QF++ T H + C+ + Sbjct: 153 AYGKCQKNILDTYVRGGVVTP-EFYTVLFSASAIFPVGWFDRQFSVSTGHDLDYFCWKL 210
>Y1084_STAHJ (Q4L7I2) Hypothetical protein SH1084| Length = 172 Score = 32.3 bits (72), Expect = 1.5 Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 2/72 (2%) Frame = -1 Query: 719 PYGAICASPAHVLEPHGLLKGKKATAFPPMAHLLTDQ--SLCENRVVIDGNLITSRAPGT 546 P AIC P +++ L G+ TA + L++ ++ + VV+D N++TSR P Sbjct: 100 PAFAICHGPQILIDTDDL-NGRTLTAVLNVRKDLSNAGANVVDESVVVDKNIVTSRTPDD 158 Query: 545 ATEFALAIVEKL 510 +F IV++L Sbjct: 159 LDDFNREIVKQL 170
>Y918_STAS1 (Q49YS0) Hypothetical protein SSP0918| Length = 172 Score = 31.2 bits (69), Expect = 3.3 Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 2/72 (2%) Frame = -1 Query: 719 PYGAICASPAHVLEPHGLLKGKKATAFPPMAHLLTDQS--LCENRVVIDGNLITSRAPGT 546 P AIC P +++ L G+ TA + L + + + VV+D N++TSR P Sbjct: 100 PAFAICHGPQILIDTDDL-NGRTLTAVLNVRKDLANAGAQVVDESVVVDKNIVTSRTPDD 158 Query: 545 ATEFALAIVEKL 510 +F IV +L Sbjct: 159 LDDFNREIVNQL 170
>MDR20_ARATH (Q9LSJ5) Putative multidrug resistance protein 20 (P-glycoprotein 18)| Length = 1225 Score = 30.0 bits (66), Expect = 7.5 Identities = 23/101 (22%), Positives = 45/101 (44%) Frame = -1 Query: 575 NLITSRAPGTATEFALAIVEKLFGREKAVGIAKEFVFM**QTELVLCAVQSANCVDNQNS 396 + ITS + G T V+ G+++ + IA+ + + VL ++ + +D+Q+ Sbjct: 1101 DFITSLSNGYDTCCGDRGVQLSGGQKQRIAIARAVL----KNPSVLLLDEATSALDSQSE 1156 Query: 395 VYIMPALVRTVCAFTGTTEAYRKHVYSECTTYFPCANGVII 273 + AL R + T A+R +C T NG ++ Sbjct: 1157 SVVQDALERLMVGRTSVVIAHRLSTIQKCDTIAVLENGAVV 1197
>GASA1_ARATH (P46689) Gibberellin-regulated protein 1 precursor| Length = 98 Score = 30.0 bits (66), Expect = 7.5 Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 6/40 (15%) Frame = -3 Query: 444 GAVCSAKCKLCG*PKLCVHHACA----RKNCV--CIYWNY 343 G+ C A+C+L P+LC H AC R NCV Y NY Sbjct: 41 GSACVARCRLSRRPRLC-HRACGTCCYRCNCVPPGTYGNY 79
>YRAA_BACSU (O06006) Hypothetical protein yraA| Length = 169 Score = 29.6 bits (65), Expect = 9.7 Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 2/64 (3%) Frame = -1 Query: 719 PYGAICASPAHVLEPHGLLKGKKATAFPPMAHLLTDQ--SLCENRVVIDGNLITSRAPGT 546 P AIC P VL LLKGK T + + L + + + VV+ N++TSR P Sbjct: 98 PVFAICHGP-QVLIDTDLLKGKDITGYRSIRKDLINAGANYKDAEVVVSHNIVTSRTPDD 156 Query: 545 ATEF 534 F Sbjct: 157 LEAF 160 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 108,285,352 Number of Sequences: 219361 Number of extensions: 2314988 Number of successful extensions: 5885 Number of sequences better than 10.0: 29 Number of HSP's better than 10.0 without gapping: 5659 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5881 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7366267610 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)