ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd23a04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1THIJ_ECOLI (Q46948) Protein thiJ 64 5e-10
2THIJ_SALTY (P55880) Protein thiJ 60 5e-09
3PARK7_HUMAN (Q99497) Protein DJ-1 (Oncogene DJ1) 55 2e-07
4PARK7_RAT (O88767) Protein DJ-1 (Contraception-associated protei... 52 2e-06
5PARK7_MOUSE (Q99LX0) Protein DJ-1 52 2e-06
6Y967_METJA (Q58377) Hypothetical protein MJ0967 49 2e-05
7PFPI_PYRAB (Q9V1F8) Intracellular protease 1 (EC 3.2.-.-) (Intra... 38 0.027
8Y029_MYCGE (P47275) Hypothetical protein MG029 37 0.047
9PFPI_PYRHO (O59413) Intracellular protease 1 (EC 3.2.-.-) (Intra... 37 0.061
10YDB3_SCHPO (Q10356) Hypothetical protein C22E12.03c in chromosome I 36 0.10
11PFPI_PYRFU (Q51732) Intracellular protease 1 (EC 3.2.-.-) (Intra... 36 0.10
12Y1560_STAES (Q8CRV8) Hypothetical protein SE_1560 35 0.30
13Y1413_STAEQ (Q5HN59) Hypothetical protein SERP1413 35 0.30
14YORF1_STAAU (P0A0K3) Hypothetical protein (ORF1) 35 0.30
15Y1965_STAAR (Q6GFI2) Hypothetical protein SAR1965 35 0.30
16Y1933_STAAC (Q5HEP9) Hypothetical protein SACOL1933 35 0.30
17Y1875_STAAM (P0A0K0) Hypothetical protein SAV1875 35 0.30
18Y1815_STAAW (P0A0K2) Hypothetical protein MW1815 35 0.30
19Y1797_STAAS (Q6G859) Hypothetical protein SAS1797 35 0.30
20Y1692_STAAN (P0A0K1) Hypothetical protein SA1692 35 0.30
21Y1625_STAS1 (Q49WT1) Hypothetical protein SSP1625 34 0.40
22Y1281_ARCFU (O28987) Hypothetical protein AF1281 34 0.52
23PFPI_PYRKO (Q5JGM7) Intracellular protease 1 (EC 3.2.-.-) (Intra... 33 0.67
24VG24_ICHV1 (Q00123) Hypothetical gene 24 protein 33 1.2
25Y1084_STAHJ (Q4L7I2) Hypothetical protein SH1084 32 1.5
26Y918_STAS1 (Q49YS0) Hypothetical protein SSP0918 31 3.3
27MDR20_ARATH (Q9LSJ5) Putative multidrug resistance protein 20 (P... 30 7.5
28GASA1_ARATH (P46689) Gibberellin-regulated protein 1 precursor 30 7.5
29YRAA_BACSU (O06006) Hypothetical protein yraA 30 9.7

>THIJ_ECOLI (Q46948) Protein thiJ|
          Length = 196

 Score = 63.9 bits (154), Expect = 5e-10
 Identities = 35/83 (42%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
 Frame = -1

Query: 710 AICASPAHVLEPHGLLKGKKATAFPPMAHLLTDQSLCENRVVIDGN--LITSRAPGTATE 537
           AICA+PA VL PH +      T FP +   +  +   + RVV D    L+TS+ PGTA +
Sbjct: 104 AICAAPATVLVPHDIFPIGNMTGFPTLKDKIPAEQWLDKRVVWDARVKLLTSQGPGTAID 163

Query: 536 FALAIVEKLFGREKAVGIAKEFV 468
           F L I++ L GREKA  +A + V
Sbjct: 164 FGLKIIDLLVGREKAHEVASQLV 186



to top

>THIJ_SALTY (P55880) Protein thiJ|
          Length = 196

 Score = 60.5 bits (145), Expect = 5e-09
 Identities = 34/83 (40%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
 Frame = -1

Query: 710 AICASPAHVLEPHGLLKGKKATAFPPMAHLLTDQSLCENRVVIDGN--LITSRAPGTATE 537
           AICA+ A VL PH +      T FP +   +  +   + RVV D    L+TS+ PGTA +
Sbjct: 104 AICAAAATVLVPHDIFPIGNMTGFPALKDKIPAEQWLDKRVVWDARVKLLTSQGPGTAID 163

Query: 536 FALAIVEKLFGREKAVGIAKEFV 468
           F L I++ L GREKA  +A + V
Sbjct: 164 FGLKIIDLLAGREKAHEVASQLV 186



to top

>PARK7_HUMAN (Q99497) Protein DJ-1 (Oncogene DJ1)|
          Length = 189

 Score = 55.1 bits (131), Expect = 2e-07
 Identities = 36/84 (42%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
 Frame = -1

Query: 710 AICASPAHVLEPHGLLKGKKATAFPPMAHLLTD---QSLCENRVVIDGNLITSRAPGTAT 540
           AICA P  +L  H +  G K T  P     + +    +  ENRV  DG ++TSR PGT+ 
Sbjct: 104 AICAGPTALLA-HEIGFGSKVTTHPLAKDKMMNGGHYTYSENRVEKDGLILTSRGPGTSF 162

Query: 539 EFALAIVEKLFGREKAVGIAKEFV 468
           EFALAIVE L G+E A  +    V
Sbjct: 163 EFALAIVEALNGKEVAAQVKAPLV 186



to top

>PARK7_RAT (O88767) Protein DJ-1 (Contraception-associated protein 1) (CAP1|
           protein) (Fertility protein SP22)
          Length = 189

 Score = 52.0 bits (123), Expect = 2e-06
 Identities = 34/76 (44%), Positives = 45/76 (59%), Gaps = 3/76 (3%)
 Frame = -1

Query: 710 AICASPAHVLEPHGLLKGKKATAFPPMAHLLTD---QSLCENRVVIDGNLITSRAPGTAT 540
           AICA P  +L  H +  G K T+ P     + +    S  E+RV  DG ++TSR PGT+ 
Sbjct: 104 AICAGPTALLA-HEVGFGCKVTSHPLAKDKMMNGSHYSYSESRVEKDGLILTSRGPGTSF 162

Query: 539 EFALAIVEKLFGREKA 492
           EFALAIVE L G++ A
Sbjct: 163 EFALAIVEALSGKDMA 178



to top

>PARK7_MOUSE (Q99LX0) Protein DJ-1|
          Length = 189

 Score = 52.0 bits (123), Expect = 2e-06
 Identities = 34/76 (44%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
 Frame = -1

Query: 710 AICASPAHVLEPHGLLKGKKATAFPPMAHLLTD---QSLCENRVVIDGNLITSRAPGTAT 540
           AICA P  +L  H +  G K T  P     + +    S  E+RV  DG ++TSR PGT+ 
Sbjct: 104 AICAGPTALLA-HEVGFGCKVTTHPLAKDKMMNGSHYSYSESRVEKDGLILTSRGPGTSF 162

Query: 539 EFALAIVEKLFGREKA 492
           EFALAIVE L G++ A
Sbjct: 163 EFALAIVEALVGKDMA 178



to top

>Y967_METJA (Q58377) Hypothetical protein MJ0967|
          Length = 205

 Score = 48.5 bits (114), Expect = 2e-05
 Identities = 30/71 (42%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
 Frame = -1

Query: 710 AICASPAHVLEPHGLLKGKKATAFPP---MAHLLTDQSLCENR-VVIDGNLITSRAPGTA 543
           AIC SP  VL   G+LKGKKAT +P    +  L    ++ E+R VV+DGN+IT+++P  A
Sbjct: 131 AICLSPV-VLARAGILKGKKATVYPAPEAIEELKKAGAIYEDRGVVVDGNVITAKSPDYA 189

Query: 542 TEFALAIVEKL 510
             F L +++ +
Sbjct: 190 RLFGLEVLKAI 200



to top

>PFPI_PYRAB (Q9V1F8) Intracellular protease 1 (EC 3.2.-.-) (Intracellular|
           protease I)
          Length = 166

 Score = 38.1 bits (87), Expect = 0.027
 Identities = 19/59 (32%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
 Frame = -1

Query: 719 PYGAICASPAHVLEPHGLLKGKKATAFPPMAHLLTDQSL--CENRVVIDGNLITSRAPG 549
           P  +IC  P  +L   G+L+G++ T++P +   + +  +   +  VV+DGN ++SR PG
Sbjct: 95  PVASICHGP-QILISAGVLRGRRGTSYPGIKDDMINAGVDWVDAEVVVDGNWVSSRVPG 152



to top

>Y029_MYCGE (P47275) Hypothetical protein MG029|
          Length = 186

 Score = 37.4 bits (85), Expect = 0.047
 Identities = 22/64 (34%), Positives = 36/64 (56%)
 Frame = -1

Query: 710 AICASPAHVLEPHGLLKGKKATAFPPMAHLLTDQSLCENRVVIDGNLITSRAPGTATEFA 531
           AIC +P +VL  HG++   +  +  P  +L+  ++    +V +   LIT+R+ G A EFA
Sbjct: 100 AICDTP-NVLFKHGIITKDEIYSSFPNPNLVMSENRSTAKVTVANKLITARSAGCALEFA 158

Query: 530 LAIV 519
             IV
Sbjct: 159 TVIV 162



to top

>PFPI_PYRHO (O59413) Intracellular protease 1 (EC 3.2.-.-) (Intracellular|
           protease I)
          Length = 166

 Score = 37.0 bits (84), Expect = 0.061
 Identities = 19/58 (32%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
 Frame = -1

Query: 719 PYGAICASPAHVLEPHGLLKGKKATAFPPMAHLLTDQSL--CENRVVIDGNLITSRAP 552
           P  +IC  P  +L   G+L+G+K T++P +   + +  +   +  VV+DGN ++SR P
Sbjct: 95  PVASICHGP-QILISAGVLRGRKGTSYPGIKDDMINAGVEWVDAEVVVDGNWVSSRVP 151



to top

>YDB3_SCHPO (Q10356) Hypothetical protein C22E12.03c in chromosome I|
          Length = 191

 Score = 36.2 bits (82), Expect = 0.10
 Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
 Frame = -1

Query: 665 LKGKKATAFPPMAHLLTD--QSLCENRVVIDGNLITSRAPGTATEFALAIVEKLFGREKA 492
           L  K+ T  P +   L +      +  VV++ NLITS+ PGTA  F L ++E++  ++K 
Sbjct: 122 LPNKQITGHPSVRGQLEEGGYKYLDQPVVLEENLITSQGPGTAMLFGLKLLEQVASKDKY 181

Query: 491 VGIAK 477
             + K
Sbjct: 182 NAVYK 186



to top

>PFPI_PYRFU (Q51732) Intracellular protease 1 (EC 3.2.-.-) (Intracellular|
           protease I)
          Length = 166

 Score = 36.2 bits (82), Expect = 0.10
 Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
 Frame = -1

Query: 719 PYGAICASPAHVLEPHGLLKGKKATAFPPMAHLLTDQSL--CENRVVIDGNLITSRAPG 549
           P   IC  P  +L   G+LKG+K T++  +   + +  +   +  VV+DGN ++SR PG
Sbjct: 95  PVATICHGP-QILISAGVLKGRKGTSYIGIRDDMINAGVEWIDREVVVDGNWVSSRHPG 152



to top

>Y1560_STAES (Q8CRV8) Hypothetical protein SE_1560|
          Length = 172

 Score = 34.7 bits (78), Expect = 0.30
 Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
 Frame = -1

Query: 719 PYGAICASPAHVLEPHGLLKGKKATAFPPMAHLLTDQ--SLCENRVVIDGNLITSRAPGT 546
           P  AIC  P  +++   L KG+  T    +   L++   ++ +  VV+D N++TSR P  
Sbjct: 100 PTFAICHGPLVLVDTDDL-KGRTITGVINVRKDLSNAGANVVDESVVVDNNIVTSRVPDD 158

Query: 545 ATEFALAIVEKL 510
             +F   IV+KL
Sbjct: 159 LDDFNREIVKKL 170



to top

>Y1413_STAEQ (Q5HN59) Hypothetical protein SERP1413|
          Length = 172

 Score = 34.7 bits (78), Expect = 0.30
 Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
 Frame = -1

Query: 719 PYGAICASPAHVLEPHGLLKGKKATAFPPMAHLLTDQ--SLCENRVVIDGNLITSRAPGT 546
           P  AIC  P  +++   L KG+  T    +   L++   ++ +  VV+D N++TSR P  
Sbjct: 100 PTFAICHGPLVLVDTDDL-KGRTITGVINVRKDLSNAGANVVDESVVVDNNIVTSRVPDD 158

Query: 545 ATEFALAIVEKL 510
             +F   IV+KL
Sbjct: 159 LDDFNREIVKKL 170



to top

>YORF1_STAAU (P0A0K3) Hypothetical protein (ORF1)|
          Length = 171

 Score = 34.7 bits (78), Expect = 0.30
 Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
 Frame = -1

Query: 719 PYGAICASPAHVLEPHGLLKGKKATAFPPMAHLLTDQS--LCENRVVIDGNLITSRAPGT 546
           P  AIC  P  +++   L KG+  TA   +   L++    + +  VV+D N++TSR P  
Sbjct: 100 PTFAICHGPQILIDTDDL-KGRTLTAVLNVRKDLSNAGAHVVDESVVVDNNIVTSRVPDD 158

Query: 545 ATEFALAIVEKL 510
             +F   IV++L
Sbjct: 159 LDDFNREIVKQL 170



to top

>Y1965_STAAR (Q6GFI2) Hypothetical protein SAR1965|
          Length = 171

 Score = 34.7 bits (78), Expect = 0.30
 Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
 Frame = -1

Query: 719 PYGAICASPAHVLEPHGLLKGKKATAFPPMAHLLTDQS--LCENRVVIDGNLITSRAPGT 546
           P  AIC  P  +++   L KG+  TA   +   L++    + +  VV+D N++TSR P  
Sbjct: 100 PTFAICHGPQILIDTDDL-KGRTLTAVLNVRKDLSNAGAHVVDESVVVDNNIVTSRVPDD 158

Query: 545 ATEFALAIVEKL 510
             +F   IV++L
Sbjct: 159 LDDFNREIVKQL 170



to top

>Y1933_STAAC (Q5HEP9) Hypothetical protein SACOL1933|
          Length = 171

 Score = 34.7 bits (78), Expect = 0.30
 Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
 Frame = -1

Query: 719 PYGAICASPAHVLEPHGLLKGKKATAFPPMAHLLTDQS--LCENRVVIDGNLITSRAPGT 546
           P  AIC  P  +++   L KG+  TA   +   L++    + +  VV+D N++TSR P  
Sbjct: 100 PTFAICHGPQILIDTDDL-KGRTLTAVLNVRKDLSNAGAHVVDESVVVDNNIVTSRVPDD 158

Query: 545 ATEFALAIVEKL 510
             +F   IV++L
Sbjct: 159 LDDFNREIVKQL 170



to top

>Y1875_STAAM (P0A0K0) Hypothetical protein SAV1875|
          Length = 171

 Score = 34.7 bits (78), Expect = 0.30
 Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
 Frame = -1

Query: 719 PYGAICASPAHVLEPHGLLKGKKATAFPPMAHLLTDQS--LCENRVVIDGNLITSRAPGT 546
           P  AIC  P  +++   L KG+  TA   +   L++    + +  VV+D N++TSR P  
Sbjct: 100 PTFAICHGPQILIDTDDL-KGRTLTAVLNVRKDLSNAGAHVVDESVVVDNNIVTSRVPDD 158

Query: 545 ATEFALAIVEKL 510
             +F   IV++L
Sbjct: 159 LDDFNREIVKQL 170



to top

>Y1815_STAAW (P0A0K2) Hypothetical protein MW1815|
          Length = 171

 Score = 34.7 bits (78), Expect = 0.30
 Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
 Frame = -1

Query: 719 PYGAICASPAHVLEPHGLLKGKKATAFPPMAHLLTDQS--LCENRVVIDGNLITSRAPGT 546
           P  AIC  P  +++   L KG+  TA   +   L++    + +  VV+D N++TSR P  
Sbjct: 100 PTFAICHGPQILIDTDDL-KGRTLTAVLNVRKDLSNAGAHVVDESVVVDNNIVTSRVPDD 158

Query: 545 ATEFALAIVEKL 510
             +F   IV++L
Sbjct: 159 LDDFNREIVKQL 170



to top

>Y1797_STAAS (Q6G859) Hypothetical protein SAS1797|
          Length = 171

 Score = 34.7 bits (78), Expect = 0.30
 Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
 Frame = -1

Query: 719 PYGAICASPAHVLEPHGLLKGKKATAFPPMAHLLTDQS--LCENRVVIDGNLITSRAPGT 546
           P  AIC  P  +++   L KG+  TA   +   L++    + +  VV+D N++TSR P  
Sbjct: 100 PTFAICHGPQILIDTDDL-KGRTLTAVLNVRKDLSNAGAHVVDESVVVDNNIVTSRVPDD 158

Query: 545 ATEFALAIVEKL 510
             +F   IV++L
Sbjct: 159 LDDFNREIVKQL 170



to top

>Y1692_STAAN (P0A0K1) Hypothetical protein SA1692|
          Length = 171

 Score = 34.7 bits (78), Expect = 0.30
 Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
 Frame = -1

Query: 719 PYGAICASPAHVLEPHGLLKGKKATAFPPMAHLLTDQS--LCENRVVIDGNLITSRAPGT 546
           P  AIC  P  +++   L KG+  TA   +   L++    + +  VV+D N++TSR P  
Sbjct: 100 PTFAICHGPQILIDTDDL-KGRTLTAVLNVRKDLSNAGAHVVDESVVVDNNIVTSRVPDD 158

Query: 545 ATEFALAIVEKL 510
             +F   IV++L
Sbjct: 159 LDDFNREIVKQL 170



to top

>Y1625_STAS1 (Q49WT1) Hypothetical protein SSP1625|
          Length = 172

 Score = 34.3 bits (77), Expect = 0.40
 Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
 Frame = -1

Query: 719 PYGAICASPAHVLEPHGLLKGKKATAFPPMAHLLTDQS--LCENRVVIDGNLITSRAPGT 546
           P  AIC  P  +++   L KG+  T    +   L++    + +  VVID N++TSR P  
Sbjct: 100 PTFAICHGPLLLVDTDDL-KGRTITGVINVRKDLSNAGAHVVDESVVIDNNIVTSRVPDD 158

Query: 545 ATEFALAIVEKL 510
             +F   I++KL
Sbjct: 159 LDDFNREIIKKL 170



to top

>Y1281_ARCFU (O28987) Hypothetical protein AF1281|
          Length = 168

 Score = 33.9 bits (76), Expect = 0.52
 Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
 Frame = -1

Query: 719 PYGAICASPAHVLEPHGLLKGKKATAFPPMAH-LLTDQSLCENR-VVIDGNLITSRAPGT 546
           P  AIC  P  ++    + KG++ T++  +   L+   +L E+R VV+DGN+ITSR P  
Sbjct: 95  PVAAICHGPQLLISAMAV-KGRRMTSWIGIRDDLIAAGALYEDRPVVVDGNVITSRMPDD 153

Query: 545 ATEFALAIVEKL 510
              F   +++ L
Sbjct: 154 LPYFCGELIKIL 165



to top

>PFPI_PYRKO (Q5JGM7) Intracellular protease 1 (EC 3.2.-.-) (Intracellular|
           protease I)
          Length = 166

 Score = 33.5 bits (75), Expect = 0.67
 Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
 Frame = -1

Query: 719 PYGAICASPAHVLEPHGLLKGKKATAFPPMAHLLTDQSL--CENRVVIDGNLITSRAPG 549
           P  +IC  P  +L   G+LKG+K T+   +   + +      +  VV+DGN ++SR PG
Sbjct: 95  PVASICHGP-QILISAGVLKGRKGTSTVTIRDDVKNAGAEWIDAEVVVDGNWVSSRHPG 152



to top

>VG24_ICHV1 (Q00123) Hypothetical gene 24 protein|
          Length = 333

 Score = 32.7 bits (73), Expect = 1.2
 Identities = 19/59 (32%), Positives = 30/59 (50%)
 Frame = +1

Query: 289 AHGKYVVHSL*TCLRYASVVPVNAHTVLTSAGMMYTEFWLSTQFALCTAHSTNSVCYHM 465
           A+GK   + L T +R   V P   +TVL SA  ++   W   QF++ T H  +  C+ +
Sbjct: 153 AYGKCQKNILDTYVRGGVVTP-EFYTVLFSASAIFPVGWFDRQFSVSTGHDLDYFCWKL 210



to top

>Y1084_STAHJ (Q4L7I2) Hypothetical protein SH1084|
          Length = 172

 Score = 32.3 bits (72), Expect = 1.5
 Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
 Frame = -1

Query: 719 PYGAICASPAHVLEPHGLLKGKKATAFPPMAHLLTDQ--SLCENRVVIDGNLITSRAPGT 546
           P  AIC  P  +++   L  G+  TA   +   L++   ++ +  VV+D N++TSR P  
Sbjct: 100 PAFAICHGPQILIDTDDL-NGRTLTAVLNVRKDLSNAGANVVDESVVVDKNIVTSRTPDD 158

Query: 545 ATEFALAIVEKL 510
             +F   IV++L
Sbjct: 159 LDDFNREIVKQL 170



to top

>Y918_STAS1 (Q49YS0) Hypothetical protein SSP0918|
          Length = 172

 Score = 31.2 bits (69), Expect = 3.3
 Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
 Frame = -1

Query: 719 PYGAICASPAHVLEPHGLLKGKKATAFPPMAHLLTDQS--LCENRVVIDGNLITSRAPGT 546
           P  AIC  P  +++   L  G+  TA   +   L +    + +  VV+D N++TSR P  
Sbjct: 100 PAFAICHGPQILIDTDDL-NGRTLTAVLNVRKDLANAGAQVVDESVVVDKNIVTSRTPDD 158

Query: 545 ATEFALAIVEKL 510
             +F   IV +L
Sbjct: 159 LDDFNREIVNQL 170



to top

>MDR20_ARATH (Q9LSJ5) Putative multidrug resistance protein 20 (P-glycoprotein 18)|
          Length = 1225

 Score = 30.0 bits (66), Expect = 7.5
 Identities = 23/101 (22%), Positives = 45/101 (44%)
 Frame = -1

Query: 575  NLITSRAPGTATEFALAIVEKLFGREKAVGIAKEFVFM**QTELVLCAVQSANCVDNQNS 396
            + ITS + G  T      V+   G+++ + IA+  +    +   VL   ++ + +D+Q+ 
Sbjct: 1101 DFITSLSNGYDTCCGDRGVQLSGGQKQRIAIARAVL----KNPSVLLLDEATSALDSQSE 1156

Query: 395  VYIMPALVRTVCAFTGTTEAYRKHVYSECTTYFPCANGVII 273
              +  AL R +   T    A+R     +C T     NG ++
Sbjct: 1157 SVVQDALERLMVGRTSVVIAHRLSTIQKCDTIAVLENGAVV 1197



to top

>GASA1_ARATH (P46689) Gibberellin-regulated protein 1 precursor|
          Length = 98

 Score = 30.0 bits (66), Expect = 7.5
 Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 6/40 (15%)
 Frame = -3

Query: 444 GAVCSAKCKLCG*PKLCVHHACA----RKNCV--CIYWNY 343
           G+ C A+C+L   P+LC H AC     R NCV    Y NY
Sbjct: 41  GSACVARCRLSRRPRLC-HRACGTCCYRCNCVPPGTYGNY 79



to top

>YRAA_BACSU (O06006) Hypothetical protein yraA|
          Length = 169

 Score = 29.6 bits (65), Expect = 9.7
 Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
 Frame = -1

Query: 719 PYGAICASPAHVLEPHGLLKGKKATAFPPMAHLLTDQ--SLCENRVVIDGNLITSRAPGT 546
           P  AIC  P  VL    LLKGK  T +  +   L +   +  +  VV+  N++TSR P  
Sbjct: 98  PVFAICHGP-QVLIDTDLLKGKDITGYRSIRKDLINAGANYKDAEVVVSHNIVTSRTPDD 156

Query: 545 ATEF 534
              F
Sbjct: 157 LEAF 160


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 108,285,352
Number of Sequences: 219361
Number of extensions: 2314988
Number of successful extensions: 5885
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 5659
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5881
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 7366267610
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top