ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd23a03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY103875.1| Zea mays PCO081819 mRNA sequence 202 1e-48
2ref|XM_475842.1| Oryza sativa (japonica cultivar-group), predic... 180 4e-42
3dbj|AK103211.1| Oryza sativa (japonica cultivar-group) cDNA clon... 180 4e-42
4dbj|AK072302.1| Oryza sativa (japonica cultivar-group) cDNA clon... 180 4e-42
5gb|AC130725.2| Oryza sativa (japonica cultivar-group) chromosome... 157 5e-35
6gb|AC136492.3| Oryza sativa (japonica cultivar-group) chromosome... 157 5e-35
7dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 157 5e-35
8ref|NM_192176.1| Oryza sativa (japonica cultivar-group), predic... 127 5e-26
9dbj|AK063321.1| Oryza sativa (japonica cultivar-group) cDNA clon... 127 5e-26
10dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 123 7e-25
11dbj|AP003248.4| Oryza sativa (japonica cultivar-group) genomic D... 123 7e-25
12ref|NM_122911.3| Arabidopsis thaliana binding AT5G35200 mRNA, co... 46 0.13
13gb|BT000375.1| Arabidopsis thaliana unknown protein (At5g35200) ... 46 0.13
14gb|AY081284.1| Arabidopsis thaliana unknown protein (At5g35200) ... 46 0.13
15emb|BX830221.1|CNS09YUS Arabidopsis thaliana Full-length cDNA Co... 46 0.13
16gb|AC090597.9| Homo sapiens chromosome 11, clone RP11-541L7, com... 44 0.53
17gb|AC105282.5| Homo sapiens chromosome 18, clone RP11-452F20, co... 44 0.53
18gb|AC108922.2| Homo sapiens chromosome 11, clone RP11-352L10, co... 44 0.53
19gb|AC104607.15| Drosophila melanogaster X BAC RP98-19G9 (Roswell... 44 0.53
20gb|AC130390.4| Drosophila melanogaster X BAC RP98-21O19 (Roswell... 44 0.53
21dbj|AP002031.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 44 0.53
22gb|AE003448.4| Drosophila melanogaster chromosome X, section 32 ... 44 0.53
23gb|AF080121.1|T25C13 Arabidopsis thaliana BAC T25C13 44 0.53
24dbj|AB055862.1| Procambarus clarkii mRNA for Kettin, complete cds 44 0.53
25dbj|AB055861.1| Procambarus clarkii I-con mRNA for I-connectin, ... 44 0.53
26gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome 42 2.1
27emb|AL162719.18| Human DNA sequence from clone RP11-461D23 on ch... 42 2.1
28emb|BX572603.1| Rhodopseudomonas palustris CGA009 complete genom... 42 2.1
29emb|BX640408.8| Zebrafish DNA sequence from clone CH211-262L3 in... 42 2.1
30emb|BX928755.10| Zebrafish DNA sequence from clone DKEY-199C16 i... 42 2.1
31gb|AC144908.17| Mus musculus chromosome 5, clone RP23-102O19, co... 42 2.1
32dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 42 2.1
33emb|AL645647.8| Mouse DNA sequence from clone RP23-332L17 on chr... 42 2.1
34gb|CP000013.1| Borrelia garinii PBi, complete genome 40 8.3
35gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome 40 8.3
36gb|AC158976.14| Mus musculus chromosome 15, clone RP24-71M3, com... 40 8.3
37gb|AC094668.10| Rattus norvegicus BAC CH230-5F18 (Children's Ho... 40 8.3
38ref|XM_323041.1| Neurospora crassa OR74A hypothetical protein ( ... 40 8.3
39ref|XM_956423.1| Neurospora crassa OR74A hypothetical protein ( ... 40 8.3
40ref|NM_024124.2| Mus musculus histone deacetylase 9 (Hdac9), mRNA 40 8.3
41ref|XM_590962.2| PREDICTED: Bos taurus similar to polyhomeotic 1... 40 8.3
42gb|AC137512.2| Mus musculus chromosome 12 clone RP24-323C12, com... 40 8.3
43emb|AM113990.1| Drosophila ananassae mRNA for core alpha 1,3-fuc... 40 8.3
44emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ... 40 8.3
45gb|AC124741.5| Mus musculus BAC clone RP23-357D17 from chromosom... 40 8.3
46gb|AE016795.2| Vibrio vulnificus CMCP6 chromosome I complete seq... 40 8.3
47gb|AC122091.6| Rattus norvegicus 9 BAC CH230-375L16 (Children's ... 40 8.3
48emb|AL135839.15| Human DNA sequence from clone RP1-188K17 on chr... 40 8.3
49gb|AC103419.6| Rattus norvegicus 9 BAC CH230-145A24 (Children's ... 40 8.3
50emb|CR352223.11| Zebrafish DNA sequence from clone CH211-124N19 ... 40 8.3
51gb|BC098187.1| Mus musculus histone deacetylase 9, mRNA (cDNA cl... 40 8.3
52gb|AC148605.5| Gasterosteus aculeatus clone uogacrs-8c7-1, compl... 40 8.3
53gb|AC148777.1| Gasterosteus aculeatus clone uogacrs-2c11-1, comp... 40 8.3
54dbj|BA000037.2| Vibrio vulnificus YJ016 DNA, chromosome I, compl... 40 8.3
55dbj|AK133334.1| Mus musculus adult male testis cDNA, RIKEN full-... 40 8.3
56gb|AF279371.1| Mus musculus histone deacetylase-related protein ... 40 8.3
57gb|AC022598.10| Homo sapiens chromosome 8, clone RP11-119K7, com... 40 8.3
58gb|AC156033.6| Mus musculus BAC clone RP23-377G8 from chromosome... 40 8.3
59dbj|AK087563.1| Mus musculus 2 days pregnant adult female oviduc... 40 8.3
60gb|AF235053.1|AF235053 Mus musculus histone deacetylase-related ... 40 8.3
61gb|AF324492.1|AF324492 Mus musculus MEF2-interacting transcripti... 40 8.3
62gb|AE000783.1| Borrelia burgdorferi B31, complete genome 40 8.3
63ref|XM_318468.2| Anopheles gambiae str. PEST ENSANGP00000014329 ... 40 8.3
64gb|CP000004.1| Gluconobacter oxydans 621H plasmid pGOX1, complet... 40 8.3
65gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 8.3
66gb|L32861.1|BORPLSCTOP Borrelia burgdorferi 1-acyl-sn-glycerol-3... 40 8.3
67emb|AL513467.1|NC17E5 Neurospora crassa DNA linkage group V Cosm... 40 8.3
68gb|AC146300.4| Mus musculus BAC clone RP23-38L11 from 3, complet... 40 8.3
69gb|AC122240.4| Mus musculus BAC clone RP23-145L9 from 6, complet... 40 8.3
70gb|AC140929.4| Mus musculus BAC clone RP23-258I3 from 8, complet... 40 8.3
71emb|CR391940.14| Zebrafish DNA sequence from clone DKEYP-106C5 i... 40 8.3
72gb|AC165378.3| Colobus guereza clone CH272-371N6, complete sequence 40 8.3
73emb|AL928992.7| Mouse DNA sequence from clone RP23-208O9 on chro... 40 8.3
74emb|AL805958.8| Mouse DNA sequence from clone RP23-179F9 on chro... 40 8.3 
>gb|AY103875.1| Zea mays PCO081819 mRNA sequence
          Length = 1327

 Score =  202 bits (102), Expect = 1e-48
 Identities = 186/214 (86%)
 Strand = Plus / Minus

                                                                        
Query: 369  atcatcgttgggatctgctgctgctgctgagacatggcagccatttgaactgacgacgga 428
            |||||||||||||| ||||| |||||||||||||||||||||||||||||||| |  |||
Sbjct: 1016 atcatcgttgggatttgctgatgctgctgagacatggcagccatttgaactgatggtgga 957

                                                                        
Query: 429  gcggcgacgtgattcgacatcgcgaaaggatcgtttgtcatgaatgggttgggagctgat 488
            |  || || || |||||||||||||||||||| |||| ||||||||| || ||||||| |
Sbjct: 956  ggagcaacttggttcgacatcgcgaaaggatcatttgccatgaatggattaggagctgct 897

                                                                        
Query: 489  gaaccgtacagctgctgttgttgtgactgcctgtaggctccctcgtcataaaggctgtca 548
            ||||| |||||||| ||||||||   |||||||||||| || || ||||||||||| || 
Sbjct: 896  gaaccatacagctgttgttgttgcctctgcctgtaggccccatcatcataaaggctctcc 837

                                              
Query: 549  aggatgagcttgtcaagtccaccacccaattgac 582
            |  ||||||||||| |||||||||||||||||||
Sbjct: 836  aaaatgagcttgtcgagtccaccacccaattgac 803
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>ref|XM_475842.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1704

 Score =  180 bits (91), Expect = 4e-42
 Identities = 232/279 (83%)
 Strand = Plus / Minus

                                                                        
Query: 329  atgctgcggctgaattggtggcccgaagggattctgatgtatcatcgttgggatctgctg 388
            ||||||||| || |||||||| || |||||||||   || ||||| ||||| ||||| ||
Sbjct: 1590 atgctgcggttgcattggtggtccaaagggattcgcttgcatcatagttggtatctgttg 1531

                                                                        
Query: 389  ctgctgctgagacatggcagccatttgaactgacgacggagcggcgacgtgattcgacat 448
             ||||||||||||||||||||||||||||| || |  ||||  || || || ||||||||
Sbjct: 1530 atgctgctgagacatggcagccatttgaaccgatggtggaggagcaacttggttcgacat 1471

                                                                        
Query: 449  cgcgaaaggatcgtttgtcatgaatgggttgggagctgatgaaccgtacagctgctgttg 508
              |||||||||| |||| |||||| |||||||||||||| ||||| || | |||||||||
Sbjct: 1470 tacgaaaggatcatttgacatgaacgggttgggagctgaagaaccatataactgctgttg 1411

                                                                        
Query: 509  ttgtgactgcctgtaggctccctcgtcataaaggctgtcaaggatgagcttgtcaagtcc 568
             |||  |||||||||| | |||| |||||| ||||| || | ||||||||||||||  ||
Sbjct: 1410 ctgtctctgcctgtagtccccctggtcatataggctttccaagatgagcttgtcaaaccc 1351

                                                   
Query: 569  accacccaattgactatctgtaacagacgaatttgtgtt 607
            |||||||| ||||||||||| | |||| ||||| |||||
Sbjct: 1350 accacccagttgactatctgcagcagatgaattcgtgtt 1312



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 228  ccaccaaatgggttggcttgctg 250
            |||||||||||||||||||||||
Sbjct: 1688 ccaccaaatgggttggcttgctg 1666
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>dbj|AK103211.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033122M01, full
            insert sequence
          Length = 2166

 Score =  180 bits (91), Expect = 4e-42
 Identities = 232/279 (83%)
 Strand = Plus / Minus

                                                                        
Query: 329  atgctgcggctgaattggtggcccgaagggattctgatgtatcatcgttgggatctgctg 388
            ||||||||| || |||||||| || |||||||||   || ||||| ||||| ||||| ||
Sbjct: 1699 atgctgcggttgcattggtggtccaaagggattcgcttgcatcatagttggtatctgttg 1640

                                                                        
Query: 389  ctgctgctgagacatggcagccatttgaactgacgacggagcggcgacgtgattcgacat 448
             ||||||||||||||||||||||||||||| || |  ||||  || || || ||||||||
Sbjct: 1639 atgctgctgagacatggcagccatttgaaccgatggtggaggagcaacttggttcgacat 1580

                                                                        
Query: 449  cgcgaaaggatcgtttgtcatgaatgggttgggagctgatgaaccgtacagctgctgttg 508
              |||||||||| |||| |||||| |||||||||||||| ||||| || | |||||||||
Sbjct: 1579 tacgaaaggatcatttgacatgaacgggttgggagctgaagaaccatataactgctgttg 1520

                                                                        
Query: 509  ttgtgactgcctgtaggctccctcgtcataaaggctgtcaaggatgagcttgtcaagtcc 568
             |||  |||||||||| | |||| |||||| ||||| || | ||||||||||||||  ||
Sbjct: 1519 ctgtctctgcctgtagtccccctggtcatataggctttccaagatgagcttgtcaaaccc 1460

                                                   
Query: 569  accacccaattgactatctgtaacagacgaatttgtgtt 607
            |||||||| ||||||||||| | |||| ||||| |||||
Sbjct: 1459 accacccagttgactatctgcagcagatgaattcgtgtt 1421



 Score = 48.1 bits (24), Expect = 0.034
 Identities = 52/60 (86%), Gaps = 1/60 (1%)
 Strand = Plus / Minus

                                                                        
Query: 116  gacatacatgaatggccaggcagaatgcatattacagtcacacgaaaaatcgcatttgct 175
            |||||||| | | ||||||||| |||||||| || | ||||||| |||||||||||||||
Sbjct: 1902 gacatacaagtaaggccaggcacaatgcataatataatcacacg-aaaatcgcatttgct 1844



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 228  ccaccaaatgggttggcttgctg 250
            |||||||||||||||||||||||
Sbjct: 1797 ccaccaaatgggttggcttgctg 1775
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>dbj|AK072302.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023023B03, full
            insert sequence
          Length = 1993

 Score =  180 bits (91), Expect = 4e-42
 Identities = 232/279 (83%)
 Strand = Plus / Minus

                                                                        
Query: 329  atgctgcggctgaattggtggcccgaagggattctgatgtatcatcgttgggatctgctg 388
            ||||||||| || |||||||| || |||||||||   || ||||| ||||| ||||| ||
Sbjct: 1664 atgctgcggttgcattggtggtccaaagggattcgcttgcatcatagttggtatctgttg 1605

                                                                        
Query: 389  ctgctgctgagacatggcagccatttgaactgacgacggagcggcgacgtgattcgacat 448
             ||||||||||||||||||||||||||||| || |  ||||  || || || ||||||||
Sbjct: 1604 atgctgctgagacatggcagccatttgaaccgatggtggaggagcaacttggttcgacat 1545

                                                                        
Query: 449  cgcgaaaggatcgtttgtcatgaatgggttgggagctgatgaaccgtacagctgctgttg 508
              |||||||||| |||| |||||| |||||||||||||| ||||| || | |||||||||
Sbjct: 1544 tacgaaaggatcatttgacatgaacgggttgggagctgaagaaccatataactgctgttg 1485

                                                                        
Query: 509  ttgtgactgcctgtaggctccctcgtcataaaggctgtcaaggatgagcttgtcaagtcc 568
             |||  |||||||||| | |||| |||||| ||||| || | ||||||||||||||  ||
Sbjct: 1484 ctgtctctgcctgtagtccccctggtcatataggctttccaagatgagcttgtcaaaccc 1425

                                                   
Query: 569  accacccaattgactatctgtaacagacgaatttgtgtt 607
            |||||||| ||||||||||| | |||| ||||| |||||
Sbjct: 1424 accacccagttgactatctgcagcagatgaattcgtgtt 1386



 Score = 48.1 bits (24), Expect = 0.034
 Identities = 52/60 (86%), Gaps = 1/60 (1%)
 Strand = Plus / Minus

                                                                        
Query: 116  gacatacatgaatggccaggcagaatgcatattacagtcacacgaaaaatcgcatttgct 175
            |||||||| | | ||||||||| |||||||| || | ||||||| |||||||||||||||
Sbjct: 1867 gacatacaagtaaggccaggcacaatgcataatataatcacacg-aaaatcgcatttgct 1809



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 228  ccaccaaatgggttggcttgctg 250
            |||||||||||||||||||||||
Sbjct: 1762 ccaccaaatgggttggcttgctg 1740
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>gb|AC130725.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0494H05,
             complete sequence
          Length = 141715

 Score =  157 bits (79), Expect = 5e-35
 Identities = 205/247 (82%)
 Strand = Plus / Plus

                                                                         
Query: 329   atgctgcggctgaattggtggcccgaagggattctgatgtatcatcgttgggatctgctg 388
             ||||||||| || |||||||| || |||||||||   || ||||| ||||| ||||| ||
Sbjct: 22042 atgctgcggttgcattggtggtccaaagggattcgcttgcatcatagttggtatctgttg 22101

                                                                         
Query: 389   ctgctgctgagacatggcagccatttgaactgacgacggagcggcgacgtgattcgacat 448
              ||||||||||||||||||||||||||||| || |  ||||  || || || ||||||||
Sbjct: 22102 atgctgctgagacatggcagccatttgaaccgatggtggaggagcaacttggttcgacat 22161

                                                                         
Query: 449   cgcgaaaggatcgtttgtcatgaatgggttgggagctgatgaaccgtacagctgctgttg 508
               |||||||||| |||| |||||| |||||||||||||| ||||| || | |||||||||
Sbjct: 22162 tacgaaaggatcatttgacatgaacgggttgggagctgaagaaccatataactgctgttg 22221

                                                                         
Query: 509   ttgtgactgcctgtaggctccctcgtcataaaggctgtcaaggatgagcttgtcaagtcc 568
              |||  |||||||||| | |||| |||||| ||||| || | ||||||||||||||  ||
Sbjct: 22222 ctgtctctgcctgtagtccccctggtcatataggctttccaagatgagcttgtcaaaccc 22281

                    
Query: 569   accaccc 575
             |||||||
Sbjct: 22282 accaccc 22288



 Score = 48.1 bits (24), Expect = 0.034
 Identities = 52/60 (86%), Gaps = 1/60 (1%)
 Strand = Plus / Plus

                                                                         
Query: 116   gacatacatgaatggccaggcagaatgcatattacagtcacacgaaaaatcgcatttgct 175
             |||||||| | | ||||||||| |||||||| || | ||||||||| |||||||||||||
Sbjct: 21839 gacatacaagtaaggccaggcacaatgcataatataatcacacgaa-aatcgcatttgct 21897



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 228   ccaccaaatgggttggcttgctg 250
             |||||||||||||||||||||||
Sbjct: 21944 ccaccaaatgggttggcttgctg 21966
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>gb|AC136492.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0554F08,
             complete sequence
          Length = 166218

 Score =  157 bits (79), Expect = 5e-35
 Identities = 205/247 (82%)
 Strand = Plus / Plus

                                                                         
Query: 329   atgctgcggctgaattggtggcccgaagggattctgatgtatcatcgttgggatctgctg 388
             ||||||||| || |||||||| || |||||||||   || ||||| ||||| ||||| ||
Sbjct: 47883 atgctgcggttgcattggtggtccaaagggattcgcttgcatcatagttggtatctgttg 47942

                                                                         
Query: 389   ctgctgctgagacatggcagccatttgaactgacgacggagcggcgacgtgattcgacat 448
              ||||||||||||||||||||||||||||| || |  ||||  || || || ||||||||
Sbjct: 47943 atgctgctgagacatggcagccatttgaaccgatggtggaggagcaacttggttcgacat 48002

                                                                         
Query: 449   cgcgaaaggatcgtttgtcatgaatgggttgggagctgatgaaccgtacagctgctgttg 508
               |||||||||| |||| |||||| |||||||||||||| ||||| || | |||||||||
Sbjct: 48003 tacgaaaggatcatttgacatgaacgggttgggagctgaagaaccatataactgctgttg 48062

                                                                         
Query: 509   ttgtgactgcctgtaggctccctcgtcataaaggctgtcaaggatgagcttgtcaagtcc 568
              |||  |||||||||| | |||| |||||| ||||| || | ||||||||||||||  ||
Sbjct: 48063 ctgtctctgcctgtagtccccctggtcatataggctttccaagatgagcttgtcaaaccc 48122

                    
Query: 569   accaccc 575
             |||||||
Sbjct: 48123 accaccc 48129



 Score = 48.1 bits (24), Expect = 0.034
 Identities = 52/60 (86%), Gaps = 1/60 (1%)
 Strand = Plus / Plus

                                                                         
Query: 116   gacatacatgaatggccaggcagaatgcatattacagtcacacgaaaaatcgcatttgct 175
             |||||||| | | ||||||||| |||||||| || | |||||||| ||||||||||||||
Sbjct: 47680 gacatacaagtaaggccaggcacaatgcataatataatcacacga-aaatcgcatttgct 47738



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 228   ccaccaaatgggttggcttgctg 250
             |||||||||||||||||||||||
Sbjct: 47785 ccaccaaatgggttggcttgctg 47807
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  157 bits (79), Expect = 5e-35
 Identities = 205/247 (82%)
 Strand = Plus / Plus

                                                                            
Query: 329      atgctgcggctgaattggtggcccgaagggattctgatgtatcatcgttgggatctgctg 388
                ||||||||| || |||||||| || |||||||||   || ||||| ||||| ||||| ||
Sbjct: 27015460 atgctgcggttgcattggtggtccaaagggattcgcttgcatcatagttggtatctgttg 27015519

                                                                            
Query: 389      ctgctgctgagacatggcagccatttgaactgacgacggagcggcgacgtgattcgacat 448
                 ||||||||||||||||||||||||||||| || |  ||||  || || || ||||||||
Sbjct: 27015520 atgctgctgagacatggcagccatttgaaccgatggtggaggagcaacttggttcgacat 27015579

                                                                            
Query: 449      cgcgaaaggatcgtttgtcatgaatgggttgggagctgatgaaccgtacagctgctgttg 508
                  |||||||||| |||| |||||| |||||||||||||| ||||| || | |||||||||
Sbjct: 27015580 tacgaaaggatcatttgacatgaacgggttgggagctgaagaaccatataactgctgttg 27015639

                                                                            
Query: 509      ttgtgactgcctgtaggctccctcgtcataaaggctgtcaaggatgagcttgtcaagtcc 568
                 |||  |||||||||| | |||| |||||| ||||| || | ||||||||||||||  ||
Sbjct: 27015640 ctgtctctgcctgtagtccccctggtcatataggctttccaagatgagcttgtcaaaccc 27015699

                       
Query: 569      accaccc 575
                |||||||
Sbjct: 27015700 accaccc 27015706



 Score = 48.1 bits (24), Expect = 0.034
 Identities = 52/60 (86%), Gaps = 1/60 (1%)
 Strand = Plus / Plus

                                                                            
Query: 116      gacatacatgaatggccaggcagaatgcatattacagtcacacgaaaaatcgcatttgct 175
                |||||||| | | ||||||||| |||||||| || | ||||||| |||||||||||||||
Sbjct: 27015257 gacatacaagtaaggccaggcacaatgcataatataatcacacg-aaaatcgcatttgct 27015315



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 228      ccaccaaatgggttggcttgctg 250
                |||||||||||||||||||||||
Sbjct: 27015362 ccaccaaatgggttggcttgctg 27015384
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>ref|NM_192176.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1626

 Score =  127 bits (64), Expect = 5e-26
 Identities = 207/253 (81%), Gaps = 5/253 (1%)
 Strand = Plus / Minus

                                                                        
Query: 329  atgctgcggctgaattggtggcccgaagggattctgatgtatcatcgttgggatctgctg 388
            |||||||||||| | ||||||||||||||||||  | || |||||| | || ||||||||
Sbjct: 1512 atgctgcggctgtagtggtggcccgaagggatttggctgcatcatcataggcatctgctg 1453

                                                                        
Query: 389  ctgctgctgagacatggcagccatttgaactgacgacggagcggcgacgtgattcgacat 448
              ||||||||| ||||  ||||||||||||||| |  || |  || || |||||||||||
Sbjct: 1452 gggctgctgagtcatgctagccatttgaactgatggtgggggagctacttgattcgacat 1393

                                                                        
Query: 449  cgcgaaaggatcgtttgtcatgaatgggttgggagctgatgaaccgtacagctgctgttg 508
             |||||||||||  | | |||||| |||||||| || | |||||| ||||||||||| ||
Sbjct: 1392 agcgaaaggatcactcgccatgaaagggttgggggcagctgaaccatacagctgctgctg 1333

                                                                        
Query: 509  ttg----tgactgcctgtaggctccctcgtcataaaggctgtcaaggatgagcttgtcaa 564
             ||    || ||||||||||| ||||||||| || |||||||| || ||||| |||||||
Sbjct: 1332 ctgcatctg-ctgcctgtaggttccctcgtcgtataggctgtccagaatgagtttgtcaa 1274

                         
Query: 565  gtccaccacccaa 577
             ||||||||||||
Sbjct: 1273 atccaccacccaa 1261
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>dbj|AK063321.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-113-H02, full
            insert sequence
          Length = 2221

 Score =  127 bits (64), Expect = 5e-26
 Identities = 207/253 (81%), Gaps = 5/253 (1%)
 Strand = Plus / Minus

                                                                        
Query: 329  atgctgcggctgaattggtggcccgaagggattctgatgtatcatcgttgggatctgctg 388
            |||||||||||| | ||||||||||||||||||  | || |||||| | || ||||||||
Sbjct: 1739 atgctgcggctgtagtggtggcccgaagggatttggctgcatcatcataggcatctgctg 1680

                                                                        
Query: 389  ctgctgctgagacatggcagccatttgaactgacgacggagcggcgacgtgattcgacat 448
              ||||||||| ||||  ||||||||||||||| |  || |  || || |||||||||||
Sbjct: 1679 gggctgctgagtcatgctagccatttgaactgatggtgggggagctacttgattcgacat 1620

                                                                        
Query: 449  cgcgaaaggatcgtttgtcatgaatgggttgggagctgatgaaccgtacagctgctgttg 508
             |||||||||||  | | |||||| |||||||| || | |||||| ||||||||||| ||
Sbjct: 1619 agcgaaaggatcactcgccatgaaagggttgggggcagctgaaccatacagctgctgctg 1560

                                                                        
Query: 509  ttg----tgactgcctgtaggctccctcgtcataaaggctgtcaaggatgagcttgtcaa 564
             ||    || ||||||||||| ||||||||| || |||||||| || ||||| |||||||
Sbjct: 1559 ctgcatctg-ctgcctgtaggttccctcgtcgtataggctgtccagaatgagtttgtcaa 1501

                         
Query: 565  gtccaccacccaa 577
             ||||||||||||
Sbjct: 1500 atccaccacccaa 1488
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  123 bits (62), Expect = 7e-25
 Identities = 205/251 (81%), Gaps = 5/251 (1%)
 Strand = Plus / Minus

                                                                            
Query: 329      atgctgcggctgaattggtggcccgaagggattctgatgtatcatcgttgggatctgctg 388
                |||||||||||| | ||||||||||||||||||  | || |||||| | || ||||||||
Sbjct: 28727817 atgctgcggctgtagtggtggcccgaagggatttggctgcatcatcataggcatctgctg 28727758

                                                                            
Query: 389      ctgctgctgagacatggcagccatttgaactgacgacggagcggcgacgtgattcgacat 448
                  ||||||||| ||||  ||||||||||||||| |  || |  || || |||||||||||
Sbjct: 28727757 gggctgctgagtcatgctagccatttgaactgatggtgggggagctacttgattcgacat 28727698

                                                                            
Query: 449      cgcgaaaggatcgtttgtcatgaatgggttgggagctgatgaaccgtacagctgctgttg 508
                 |||||||||||  | | |||||| |||||||| || | |||||| ||||||||||| ||
Sbjct: 28727697 agcgaaaggatcactcgccatgaaagggttgggggcagctgaaccatacagctgctgctg 28727638

                                                                            
Query: 509      ttg----tgactgcctgtaggctccctcgtcataaaggctgtcaaggatgagcttgtcaa 564
                 ||    || ||||||||||| ||||||||| || |||||||| || ||||| |||||||
Sbjct: 28727637 ctgcatctg-ctgcctgtaggttccctcgtcgtataggctgtccagaatgagtttgtcaa 28727579

                           
Query: 565      gtccaccaccc 575
                 ||||||||||
Sbjct: 28727578 atccaccaccc 28727568
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>dbj|AP003248.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0431H09
          Length = 166886

 Score =  123 bits (62), Expect = 7e-25
 Identities = 205/251 (81%), Gaps = 5/251 (1%)
 Strand = Plus / Minus

                                                                          
Query: 329    atgctgcggctgaattggtggcccgaagggattctgatgtatcatcgttgggatctgctg 388
              |||||||||||| | ||||||||||||||||||  | || |||||| | || ||||||||
Sbjct: 110891 atgctgcggctgtagtggtggcccgaagggatttggctgcatcatcataggcatctgctg 110832

                                                                          
Query: 389    ctgctgctgagacatggcagccatttgaactgacgacggagcggcgacgtgattcgacat 448
                ||||||||| ||||  ||||||||||||||| |  || |  || || |||||||||||
Sbjct: 110831 gggctgctgagtcatgctagccatttgaactgatggtgggggagctacttgattcgacat 110772

                                                                          
Query: 449    cgcgaaaggatcgtttgtcatgaatgggttgggagctgatgaaccgtacagctgctgttg 508
               |||||||||||  | | |||||| |||||||| || | |||||| ||||||||||| ||
Sbjct: 110771 agcgaaaggatcactcgccatgaaagggttgggggcagctgaaccatacagctgctgctg 110712

                                                                          
Query: 509    ttg----tgactgcctgtaggctccctcgtcataaaggctgtcaaggatgagcttgtcaa 564
               ||    || ||||||||||| ||||||||| || |||||||| || ||||| |||||||
Sbjct: 110711 ctgcatctg-ctgcctgtaggttccctcgtcgtataggctgtccagaatgagtttgtcaa 110653

                         
Query: 565    gtccaccaccc 575
               ||||||||||
Sbjct: 110652 atccaccaccc 110642
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>ref|NM_122911.3| Arabidopsis thaliana binding AT5G35200 mRNA, complete cds
          Length = 2149

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 47/55 (85%)
 Strand = Plus / Minus

                                                                   
Query: 534  tcataaaggctgtcaaggatgagcttgtcaagtccaccacccaattgactatctg 588
            ||||| |||||||||||  |||||||||| ||||||||  ||||||  |||||||
Sbjct: 1529 tcatataggctgtcaagtgtgagcttgtccagtccacccgccaatttgctatctg 1475
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>gb|BT000375.1| Arabidopsis thaliana unknown protein (At5g35200) mRNA, complete cds
          Length = 1715

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 47/55 (85%)
 Strand = Plus / Minus

                                                                   
Query: 534  tcataaaggctgtcaaggatgagcttgtcaagtccaccacccaattgactatctg 588
            ||||| |||||||||||  |||||||||| ||||||||  ||||||  |||||||
Sbjct: 1316 tcatataggctgtcaagtgtgagcttgtccagtccacccgccaatttgctatctg 1262
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>gb|AY081284.1| Arabidopsis thaliana unknown protein (At5g35200) mRNA, complete cds
          Length = 2081

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 47/55 (85%)
 Strand = Plus / Minus

                                                                   
Query: 534  tcataaaggctgtcaaggatgagcttgtcaagtccaccacccaattgactatctg 588
            ||||| |||||||||||  |||||||||| ||||||||  ||||||  |||||||
Sbjct: 1529 tcatataggctgtcaagtgtgagcttgtccagtccacccgccaatttgctatctg 1475
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>emb|BX830221.1|CNS09YUS Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB67ZA01 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 2003

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 47/55 (85%)
 Strand = Plus / Minus

                                                                   
Query: 534  tcataaaggctgtcaaggatgagcttgtcaagtccaccacccaattgactatctg 588
            ||||| |||||||||||  |||||||||| ||||||||  ||||||  |||||||
Sbjct: 1506 tcatataggctgtcaagtgtgagcttgtccagtccacccgccaatttgctatctg 1452
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>gb|AC090597.9| Homo sapiens chromosome 11, clone RP11-541L7, complete sequence
          Length = 160210

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 54    aacaagggtcacttggcagagt 75
             ||||||||||||||||||||||
Sbjct: 73869 aacaagggtcacttggcagagt 73890
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>gb|AC105282.5| Homo sapiens chromosome 18, clone RP11-452F20, complete sequence
          Length = 167258

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 232   caaatgggttggcttgctgttgttgg 257
             ||||||||||| ||||||||||||||
Sbjct: 71081 caaatgggttgtcttgctgttgttgg 71056
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>gb|AC108922.2| Homo sapiens chromosome 11, clone RP11-352L10, complete sequence
          Length = 147862

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 54     aacaagggtcacttggcagagt 75
              ||||||||||||||||||||||
Sbjct: 139742 aacaagggtcacttggcagagt 139763
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>gb|AC104607.15| Drosophila melanogaster X BAC RP98-19G9 (Roswell Park Cancer
            Institute Drosophila BAC Library) complete sequence
          Length = 137639

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 241  tggcttgctgttgttggttgtt 262
            ||||||||||||||||||||||
Sbjct: 7477 tggcttgctgttgttggttgtt 7498
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>gb|AC130390.4| Drosophila melanogaster X BAC RP98-21O19 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 184175

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 241    tggcttgctgttgttggttgtt 262
              ||||||||||||||||||||||
Sbjct: 121231 tggcttgctgttgttggttgtt 121252
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>dbj|AP002031.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K3D20
          Length = 81208

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                   
Query: 534   tcataaaggctgtcaaggatgagcttgtcaagtccacc 571
             ||||| |||||||||||  |||||||||| ||||||||
Sbjct: 42544 tcatataggctgtcaagtgtgagcttgtccagtccacc 42581
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>gb|AE003448.4| Drosophila melanogaster chromosome X, section 32 of 74 of the complete
              sequence
          Length = 318665

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 241    tggcttgctgttgttggttgtt 262
              ||||||||||||||||||||||
Sbjct: 148120 tggcttgctgttgttggttgtt 148141
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>gb|AF080121.1|T25C13 Arabidopsis thaliana BAC T25C13
          Length = 120067

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                   
Query: 534   tcataaaggctgtcaaggatgagcttgtcaagtccacc 571
             ||||| |||||||||||  |||||||||| ||||||||
Sbjct: 74300 tcatataggctgtcaagtgtgagcttgtccagtccacc 74337
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>dbj|AB055862.1| Procambarus clarkii mRNA for Kettin, complete cds
          Length = 16076

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 384 tgctgctgctgctgagacatgg 405
           ||||||||||||||||||||||
Sbjct: 249 tgctgctgctgctgagacatgg 228
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>dbj|AB055861.1| Procambarus clarkii I-con mRNA for I-connectin, complete cds
          Length = 53424

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 384 tgctgctgctgctgagacatgg 405
           ||||||||||||||||||||||
Sbjct: 249 tgctgctgctgctgagacatgg 228
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>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome
          Length = 3345170

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 315     gggccagcgcccggatgctgc 335
               |||||||||||||||||||||
Sbjct: 3093816 gggccagcgcccggatgctgc 3093836
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>emb|AL162719.18| Human DNA sequence from clone RP11-461D23 on chromosome 6 Contains part
             of a putative novel transcript, complete sequence
          Length = 91219

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 380   gatctgctgctgctgctgaga 400
             |||||||||||||||||||||
Sbjct: 37819 gatctgctgctgctgctgaga 37799
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>emb|BX572603.1| Rhodopseudomonas palustris CGA009 complete genome; segment 11/16
          Length = 349635

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 321    gcgcccggatgctgcggctga 341
              |||||||||||||||||||||
Sbjct: 183862 gcgcccggatgctgcggctga 183882
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>emb|BX640408.8| Zebrafish DNA sequence from clone CH211-262L3 in linkage group 2,
              complete sequence
          Length = 123471

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 90     cgaatacacatatcattacac 110
              |||||||||||||||||||||
Sbjct: 116314 cgaatacacatatcattacac 116334
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>emb|BX928755.10| Zebrafish DNA sequence from clone DKEY-199C16 in linkage group 21,
              complete sequence
          Length = 174423

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 90     cgaatacacatatcattacac 110
              |||||||||||||||||||||
Sbjct: 133786 cgaatacacatatcattacac 133806
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>gb|AC144908.17| Mus musculus chromosome 5, clone RP23-102O19, complete sequence
          Length = 212299

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 377    tgggatctgctgctgctgctg 397
              |||||||||||||||||||||
Sbjct: 119536 tgggatctgctgctgctgctg 119516
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 316     ggccagcgcccggatgctgcg 336
               |||||||||||||||||||||
Sbjct: 1250045 ggccagcgcccggatgctgcg 1250065
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>emb|AL645647.8| Mouse DNA sequence from clone RP23-332L17 on chromosome 11, complete
             sequence
          Length = 147804

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 382   tctgctgctgctgctgagaca 402
             |||||||||||||||||||||
Sbjct: 29141 tctgctgctgctgctgagaca 29161
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>gb|CP000013.1| Borrelia garinii PBi, complete genome
          Length = 904246

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 380   gatctgctgctgctgctgag 399
             ||||||||||||||||||||
Sbjct: 36045 gatctgctgctgctgctgag 36026
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>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome
          Length = 3730232

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 268    ccgggaacgcgccgaagccg 287
              ||||||||||||||||||||
Sbjct: 955218 ccgggaacgcgccgaagccg 955237
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>gb|AC158976.14| Mus musculus chromosome 15, clone RP24-71M3, complete sequence
          Length = 182465

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 294   aggaaagggtttactgctgc 313
             ||||||||||||||||||||
Sbjct: 49771 aggaaagggtttactgctgc 49752
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>gb|AC094668.10| Rattus norvegicus  BAC CH230-5F18 (Children's Hospital Oakland Research
             Institute Rat (BN/SsNHsd/MCW) BAC library) complete
             sequence
          Length = 212263

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 383   ctgctgctgctgctgagaca 402
             ||||||||||||||||||||
Sbjct: 49541 ctgctgctgctgctgagaca 49522
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>ref|XM_323041.1| Neurospora crassa OR74A hypothetical protein ( (AL513467) conserved
            hypothetical protein [Neurospora crassa OR74A] )
            (NCU03740.1) partial mRNA
          Length = 2826

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 383  ctgctgctgctgctgagaca 402
            ||||||||||||||||||||
Sbjct: 2456 ctgctgctgctgctgagaca 2475
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>ref|XM_956423.1| Neurospora crassa OR74A hypothetical protein ( (AL513467) conserved
            hypothetical protein [Neurospora crassa OR74A] )
            (NCU03740.1) partial mRNA
          Length = 2826

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 383  ctgctgctgctgctgagaca 402
            ||||||||||||||||||||
Sbjct: 2456 ctgctgctgctgctgagaca 2475
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>ref|NM_024124.2| Mus musculus histone deacetylase 9 (Hdac9), mRNA
          Length = 4447

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 379 ggatctgctgctgctgctga 398
           ||||||||||||||||||||
Sbjct: 494 ggatctgctgctgctgctga 475
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>ref|XM_590962.2| PREDICTED: Bos taurus similar to polyhomeotic 1-like (LOC540021),
            mRNA
          Length = 4169

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 379  ggatctgctgctgctgctga 398
            ||||||||||||||||||||
Sbjct: 1519 ggatctgctgctgctgctga 1500
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>gb|AC137512.2| Mus musculus chromosome 12 clone RP24-323C12, complete sequence
          Length = 164776

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 379   ggatctgctgctgctgctga 398
             ||||||||||||||||||||
Sbjct: 13193 ggatctgctgctgctgctga 13212
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>emb|AM113990.1| Drosophila ananassae mRNA for core alpha 1,3-fucosyltransferase
           (fucTA gene)
          Length = 1544

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 384 tgctgctgctgctgagacat 403
           ||||||||||||||||||||
Sbjct: 170 tgctgctgctgctgagacat 151
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>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 307    ctgctgcagggccagcgccc 326
              ||||||||||||||||||||
Sbjct: 359503 ctgctgcagggccagcgccc 359522
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>gb|AC124741.5| Mus musculus BAC clone RP23-357D17 from chromosome 3, complete sequence
          Length = 220887

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 240    ttggcttgctgttgttggtt 259
              ||||||||||||||||||||
Sbjct: 204615 ttggcttgctgttgttggtt 204596
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>gb|AE016795.2| Vibrio vulnificus CMCP6 chromosome I complete sequence
          Length = 3281944

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 249     tgttgttggttgtttgccgc 268
               ||||||||||||||||||||
Sbjct: 2270939 tgttgttggttgtttgccgc 2270958
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>gb|AC122091.6| Rattus norvegicus 9 BAC CH230-375L16 (Children's Hospital Oakland
              Research Institute) complete sequence
          Length = 231967

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 240    ttggcttgctgttgttggtt 259
              ||||||||||||||||||||
Sbjct: 207303 ttggcttgctgttgttggtt 207284
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>emb|AL135839.15| Human DNA sequence from clone RP1-188K17 on chromosome 6q22.22-23.3
             Contains the part of the SGK gene for serum/glucocorticoid
             regulated kinase and a CpG island, complete sequence
          Length = 113673

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 245   ttgctgttgttggttgtttg 264
             ||||||||||||||||||||
Sbjct: 50036 ttgctgttgttggttgtttg 50017
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>gb|AC103419.6| Rattus norvegicus 9 BAC CH230-145A24 (Children's Hospital Oakland
              Research Institute) complete sequence
          Length = 217001

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 240    ttggcttgctgttgttggtt 259
              ||||||||||||||||||||
Sbjct: 115393 ttggcttgctgttgttggtt 115412
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>emb|CR352223.11| Zebrafish DNA sequence from clone CH211-124N19 in linkage group 9,
             complete sequence
          Length = 168212

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 381   atctgctgctgctgctgaga 400
             ||||||||||||||||||||
Sbjct: 79869 atctgctgctgctgctgaga 79888
to top
>gb|BC098187.1| Mus musculus histone deacetylase 9, mRNA (cDNA clone MGC:106408
           IMAGE:5363624), complete cds
          Length = 4447

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 379 ggatctgctgctgctgctga 398
           ||||||||||||||||||||
Sbjct: 494 ggatctgctgctgctgctga 475
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>gb|AC148605.5| Gasterosteus aculeatus clone uogacrs-8c7-1, complete sequence
          Length = 38694

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 381   atctgctgctgctgctgaga 400
             ||||||||||||||||||||
Sbjct: 36071 atctgctgctgctgctgaga 36090
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>gb|AC148777.1| Gasterosteus aculeatus clone uogacrs-2c11-1, complete sequence
          Length = 35576

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 381   atctgctgctgctgctgaga 400
             ||||||||||||||||||||
Sbjct: 21649 atctgctgctgctgctgaga 21668
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>dbj|BA000037.2| Vibrio vulnificus YJ016 DNA, chromosome I, complete sequence
          Length = 3354505

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 249     tgttgttggttgtttgccgc 268
               ||||||||||||||||||||
Sbjct: 2097006 tgttgttggttgtttgccgc 2096987
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>dbj|AK133334.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
           library, clone:4932434O14 product:histone deacetylase 9,
           full insert sequence
          Length = 3446

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 379 ggatctgctgctgctgctga 398
           ||||||||||||||||||||
Sbjct: 450 ggatctgctgctgctgctga 431
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>gb|AF279371.1| Mus musculus histone deacetylase-related protein A (Hdrpa) mRNA,
           complete cds, alternatively spliced
          Length = 1635

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 379 ggatctgctgctgctgctga 398
           ||||||||||||||||||||
Sbjct: 178 ggatctgctgctgctgctga 159
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>gb|AC022598.10| Homo sapiens chromosome 8, clone RP11-119K7, complete sequence
          Length = 155323

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 378   gggatctgctgctgctgctg 397
             ||||||||||||||||||||
Sbjct: 74346 gggatctgctgctgctgctg 74327
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>gb|AC156033.6| Mus musculus BAC clone RP23-377G8 from chromosome 12, complete sequence
          Length = 216718

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 383    ctgctgctgctgctgagaca 402
              ||||||||||||||||||||
Sbjct: 132682 ctgctgctgctgctgagaca 132701
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>dbj|AK087563.1| Mus musculus 2 days pregnant adult female oviduct cDNA, RIKEN
           full-length enriched library, clone:E230002J01
           product:MEF2-interacting transcription repressor, full
           insert sequence
          Length = 3709

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 379 ggatctgctgctgctgctga 398
           ||||||||||||||||||||
Sbjct: 799 ggatctgctgctgctgctga 780
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>gb|AF235053.1|AF235053 Mus musculus histone deacetylase-related protein mRNA, complete cds
          Length = 1767

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 379 ggatctgctgctgctgctga 398
           ||||||||||||||||||||
Sbjct: 178 ggatctgctgctgctgctga 159
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>gb|AF324492.1|AF324492 Mus musculus MEF2-interacting transcription repressor MITR (Mitr)
           mRNA, complete cds
          Length = 1800

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 379 ggatctgctgctgctgctga 398
           ||||||||||||||||||||
Sbjct: 178 ggatctgctgctgctgctga 159
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>gb|AE000783.1| Borrelia burgdorferi B31, complete genome
          Length = 910724

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 380   gatctgctgctgctgctgag 399
             ||||||||||||||||||||
Sbjct: 36200 gatctgctgctgctgctgag 36181
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>ref|XM_318468.2| Anopheles gambiae str. PEST ENSANGP00000014329
           (ENSANGG00000011840), partial mRNA
          Length = 684

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 384 tgctgctgctgctgagacat 403
           ||||||||||||||||||||
Sbjct: 668 tgctgctgctgctgagacat 649
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>gb|CP000004.1| Gluconobacter oxydans 621H plasmid pGOX1, complete sequence
          Length = 163186

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 312 gcagggccagcgcccggatg 331
           ||||||||||||||||||||
Sbjct: 913 gcagggccagcgcccggatg 894
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 268     ccgggaacgcgccgaagccg 287
               ||||||||||||||||||||
Sbjct: 3843096 ccgggaacgcgccgaagccg 3843077



 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 268     ccgggaacgcgccgaagccg 287
               ||||||||||||||||||||
Sbjct: 2802764 ccgggaacgcgccgaagccg 2802783
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>gb|L32861.1|BORPLSCTOP Borrelia burgdorferi 1-acyl-sn-glycerol-3-phosphate
           acetyltransferase (plsC) gene, 3' end; topoisomerase IV
           beta-subunit (parE) gene, 5' end
          Length = 677

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 380 gatctgctgctgctgctgag 399
           ||||||||||||||||||||
Sbjct: 65  gatctgctgctgctgctgag 84
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>emb|AL513467.1|NC17E5 Neurospora crassa DNA linkage group V Cosmid contig 17E5
          Length = 130049

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 383   ctgctgctgctgctgagaca 402
             ||||||||||||||||||||
Sbjct: 15776 ctgctgctgctgctgagaca 15757
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>gb|AC146300.4| Mus musculus BAC clone RP23-38L11 from 3, complete sequence
          Length = 261825

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 240    ttggcttgctgttgttggtt 259
              ||||||||||||||||||||
Sbjct: 175541 ttggcttgctgttgttggtt 175560
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>gb|AC122240.4| Mus musculus BAC clone RP23-145L9 from 6, complete sequence
          Length = 211740

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 15     atatatgctggtgttacaca 34
              ||||||||||||||||||||
Sbjct: 129036 atatatgctggtgttacaca 129055
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>gb|AC140929.4| Mus musculus BAC clone RP23-258I3 from 8, complete sequence
          Length = 221905

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 47     tctttacaacaagggtcact 66
              ||||||||||||||||||||
Sbjct: 143863 tctttacaacaagggtcact 143882
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>emb|CR391940.14| Zebrafish DNA sequence from clone DKEYP-106C5 in linkage group 2,
             complete sequence
          Length = 140400

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 383   ctgctgctgctgctgagaca 402
             ||||||||||||||||||||
Sbjct: 37684 ctgctgctgctgctgagaca 37703
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>gb|AC165378.3| Colobus guereza clone CH272-371N6, complete sequence
          Length = 202455

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 103   cattacacaggtagacatac 122
             ||||||||||||||||||||
Sbjct: 76355 cattacacaggtagacatac 76336
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>emb|AL928992.7| Mouse DNA sequence from clone RP23-208O9 on chromosome 2, complete
              sequence
          Length = 136064

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 385    gctgctgctgctgagacatg 404
              ||||||||||||||||||||
Sbjct: 110139 gctgctgctgctgagacatg 110120
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>emb|AL805958.8| Mouse DNA sequence from clone RP23-179F9 on chromosome 2, complete
             sequence
          Length = 198627

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 105   ttacacaggtagacatacatgaat 128
             ||||||||||| ||||||||||||
Sbjct: 73765 ttacacaggtacacatacatgaat 73788


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,484,503
Number of Sequences: 3902068
Number of extensions: 5484503
Number of successful extensions: 308009
Number of sequences better than 10.0: 74
Number of HSP's better than 10.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 307133
Number of HSP's gapped (non-prelim): 864
length of query: 607
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 584
effective length of database: 17,143,297,704
effective search space: 10011685859136
effective search space used: 10011685859136
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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