>emb|AL139214.20| Human DNA sequence from clone RP11-166A4 on chromosome 1q31.1-31.3
             Contains the 3' end of a novel gene, complete sequence
          Length = 142555

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                      
Query: 41    acatacatggactattaatattttt 65
             |||||||||||||||||||||||||
Sbjct: 93916 acatacatggactattaatattttt 93940

>emb|Z84538.1|H1374YRCX H.vulgare BARE-1 long terminal repeat DNA; ID 1374YRCX
          Length = 239

 Score = 48.1 bits (24), Expect = 0.036
 Identities = 33/35 (94%), Gaps = 1/35 (2%)
 Strand = Plus / Minus

                                              
Query: 3   atttattattgcctttngg-catatttccaacata 36
           |||||||||||||||| || |||||||||||||||
Sbjct: 139 atttattattgcctttaggacatatttccaacata 105

>gb|AY643844.1|AY643842S3 Hordeum vulgare subsp. vulgare clones BAC 799C8 and 122A5 hardness
             locus region
          Length = 160897

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 31/33 (93%), Gaps = 1/33 (3%)
 Strand = Plus / Plus

                                              
Query: 3     atttattattgccttt-nggcatatttccaaca 34
             ||||||||||||||||  |||||||||||||||
Sbjct: 23306 atttattattgcctttagggcatatttccaaca 23338

>emb|CR626934.1| Triticum aestivum
          Length = 94398

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 31/33 (93%), Gaps = 1/33 (3%)
 Strand = Plus / Plus

                                              
Query: 3     atttattattgccttt-nggcatatttccaaca 34
             ||||||||||||||||  |||||||||||||||
Sbjct: 77870 atttattattgcctttagggcatatttccaaca 77902

>gb|AY943294.1| Hordeum vulgare subsp. vulgare clone BAC 673I14, complete sequence
          Length = 108608

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 31/33 (93%), Gaps = 1/33 (3%)
 Strand = Plus / Minus

                                              
Query: 4     tttattattgcctttngg-catatttccaacat 35
             ||||||||||||||| || ||||||||||||||
Sbjct: 20697 tttattattgcctttagggcatatttccaacat 20665

>emb|AL133474.9| Human DNA sequence from clone RP1-239I6 on chromosome 6, complete
             sequence
          Length = 102142

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 224   gcataggtaagaggaataatt 244
             |||||||||||||||||||||
Sbjct: 19084 gcataggtaagaggaataatt 19064

>emb|BX323828.7| Zebrafish DNA sequence from clone DKEY-102M7 in linkage group 14,
              complete sequence
          Length = 206011

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 182    tattcaaattacatgccacca 202
              |||||||||||||||||||||
Sbjct: 174104 tattcaaattacatgccacca 174084

>gb|AC022346.4| Drosophila melanogaster clone BACR22I24, complete sequence
          Length = 181052

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 47    atggactattaatatttttt 66
             ||||||||||||||||||||
Sbjct: 36883 atggactattaatatttttt 36864

>gb|AY534123.1|SEG_AY534122S2 Aegilops tauschii transposons Caspar, XJ, Angela, and XJ, complete
            sequence; LRR protein WM1.7 (WM1.7) and LRR protein
            WM1.12 (WM1.12) genes, complete cds; transposons
            Ophelia2, Angela3s, and XJ3, complete sequence; LRR
            protein WM1.3 (WM1.3) gene, complete cds; Stowaway MITE,
            transposons XJ1, Jody, Angela, and XJ and Stowaway MITE,
            complete sequence; LRR protein WM1.2 (WM1.2) and LLR
            protein WM1.1 (WM1.1) genes, complete cds; transposons
            XJ, XA, Angela, and Fred and WM1.11 gene, complete
            sequence; RPM1-like sequence and LRR protein WM1.10
            (WM1.10) genes, complete cds; and transposon XJ, complete
            sequence
          Length = 198649

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 32/35 (91%), Gaps = 1/35 (2%)
 Strand = Plus / Minus

                                               
Query: 3    atttattattgcctttngg-catatttccaacata 36
            |||||||||||||| | || |||||||||||||||
Sbjct: 3664 atttattattgcctctagggcatatttccaacata 3630

>gb|AC009911.11| Drosophila melanogaster clone BACR01N17, complete sequence
          Length = 170190

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 51   actattaatattttttcgag 70
            ||||||||||||||||||||
Sbjct: 3085 actattaatattttttcgag 3066

>gb|AC129021.4| Mus musculus BAC clone RP23-312H15 from 16, complete sequence
          Length = 184961

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 184  ttcaaattacatgccaccat 203
            ||||||||||||||||||||
Sbjct: 6132 ttcaaattacatgccaccat 6113

>gb|AC087900.19| Mus musculus strain C57BL/6J clone rp23-171i6 map 19, complete sequence
          Length = 195066

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 184    ttcaaattacatgccaccat 203
              ||||||||||||||||||||
Sbjct: 108192 ttcaaattacatgccaccat 108173

>gb|AY013246.1| Hordeum vulgare chromosome 5 BAC 635P2, complete sequence
          Length = 102433

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 32/35 (91%), Gaps = 1/35 (2%)
 Strand = Plus / Minus

                                                
Query: 1     ctatttattattgcctttngg-catatttccaaca 34
             |||||||| ||||||||| || |||||||||||||
Sbjct: 50324 ctatttatcattgcctttagggcatatttccaaca 50290

>gb|AC021486.10| Homo sapiens chromosome , clone RP11-73I6, complete sequence
          Length = 144356

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 309  tccaactcgaacaaaccactttct 332
            ||||||| ||||||||||||||||
Sbjct: 4014 tccaactagaacaaaccactttct 3991

>gb|AC005719.2|AC005719 Drosophila melanogaster, chromosome 2L, region 38A5-38B4, BAC clone
              BACR48M05, complete sequence
          Length = 188341

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 51     actattaatattttttcgag 70
              ||||||||||||||||||||
Sbjct: 177144 actattaatattttttcgag 177125

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 32       acatatactacatacatgga 51
                ||||||||||||||||||||
Sbjct: 23407586 acatatactacatacatgga 23407605

>dbj|AP003333.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1103C09
          Length = 163996

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 32     acatatactacatacatgga 51
              ||||||||||||||||||||
Sbjct: 133284 acatatactacatacatgga 133303

>ref|XM_315654.2| Anopheles gambiae str. PEST ENSANGP00000007280
           (ENSANGG00000005495), partial mRNA
          Length = 3861

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 455 cgtgagccctgggacgtaca 474
           ||||||||||||||||||||
Sbjct: 717 cgtgagccctgggacgtaca 736

>ref|XM_306785.2| Anopheles gambiae str. PEST ENSANGP00000013701
           (ENSANGG00000011212), partial mRNA
          Length = 1998

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 455 cgtgagccctgggacgtaca 474
           ||||||||||||||||||||
Sbjct: 717 cgtgagccctgggacgtaca 736

>gb|AE003664.3| Drosophila melanogaster chromosome 2L, section 73 of 83 of the complete
             sequence
          Length = 266287

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 51    actattaatattttttcgag 70
             ||||||||||||||||||||
Sbjct: 33363 actattaatattttttcgag 33382

>gb|AE003496.4| Drosophila melanogaster chromosome X, section 48 of 74 of the complete
              sequence
          Length = 299868

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 47     atggactattaatatttttt 66
              ||||||||||||||||||||
Sbjct: 171026 atggactattaatatttttt 171045

>gb|AC132334.3| Mus musculus BAC clone RP24-228N8 from 6, complete sequence
          Length = 150109

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 255    gcttttatgtttcaaagaac 274
              ||||||||||||||||||||
Sbjct: 126029 gcttttatgtttcaaagaac 126048

>gb|AC123548.4| Mus musculus BAC clone RP23-441J16 from 6, complete sequence
          Length = 178488

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 255   gcttttatgtttcaaagaac 274
             ||||||||||||||||||||
Sbjct: 29310 gcttttatgtttcaaagaac 29329

>dbj|AP006675.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT04L10, TM0370,
             complete sequence
          Length = 97544

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 53    tattaatattttttcgaggggata 76
             |||||||||||||| |||||||||
Sbjct: 73576 tattaatattttttagaggggata 73599

>gb|AC132241.3| Mus musculus BAC clone RP24-413I2 from chromosome 1, complete sequence
          Length = 138670

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 85    tcaaattgaccaagcatggt 104
             ||||||||||||||||||||
Sbjct: 43135 tcaaattgaccaagcatggt 43154


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,134,120
Number of Sequences: 3902068
Number of extensions: 5134120
Number of successful extensions: 91060
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 90954
Number of HSP's gapped (non-prelim): 102
length of query: 635
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 612
effective length of database: 17,143,297,704
effective search space: 10491698194848
effective search space used: 10491698194848
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)