ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd22k16
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1E13B_WHEAT (P52409) Glucan endo-1,3-beta-glucosidase precursor (... 153 3e-37
2E131_ARATH (O65399) Putative glucan endo-1,3-beta-glucosidase 1 ... 77 3e-14
3E133_ARATH (Q9ZU91) Putative glucan endo-1,3-beta-glucosidase 3 ... 75 1e-13
4E134_ARATH (Q94CD8) Putative glucan endo-1,3-beta-glucosidase 4 ... 73 5e-13
5E135_ARATH (Q9M088) Putative glucan endo-1,3-beta-glucosidase 5 ... 67 4e-11
6E136_ARATH (Q93Z08) Putative glucan endo-1,3-beta-glucosidase 6 ... 56 6e-08
7PHR1_CANAL (P43076) pH-responsive protein 1 precursor (pH-regula... 53 5e-07
8PHR2_CANAL (O13318) pH-responsive protein 2 precursor (pH-regula... 48 2e-05
9EPD1_CANMA (P56092) Protein EPD1 precursor (Essential for pseudo... 46 6e-05
10EA6_ARATH (Q06915) Probable glucan endo-1,3-beta-glucosidase A6 ... 46 6e-05
11EPD2_CANMA (O74137) Protein EPD2 precursor (Essential for pseudo... 41 0.003
12GAS1_YEAST (P22146) Glycolipid-anchored surface protein 1 precur... 40 0.004
13YLM2_SCHPO (Q9P378) Hypothetical protein C19B12.02c precursor 39 0.013
14PSTA_DICDI (P11976) Prestalk protein precursor 31 2.1
15TRPG_CAEEL (Q93971) Transient receptor potential channel (Abnorm... 31 2.7
16DYR1A_RAT (Q63470) Dual specificity tyrosine-phosphorylation-reg... 30 6.0
17DYR1A_MOUSE (Q61214) Dual specificity tyrosine-phosphorylation-r... 30 6.0
18NOTC3_RAT (Q9R172) Neurogenic locus notch homolog protein 3 prec... 30 6.0

>E13B_WHEAT (P52409) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39)|
           ((1->3)-beta-glucan endohydrolase)
           ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase)
          Length = 461

 Score =  153 bits (387), Expect = 3e-37
 Identities = 69/73 (94%), Positives = 71/73 (97%)
 Frame = -2

Query: 557 LQNNINYACGFVDCKAIQSGGACFSPNSLQSHASYVMNAYYQANGHTDSACDFKGTGVVT 378
           LQNNINYACGFVDCK IQSGGACFSPNSLQ+HASYVMNAYYQANGHTD ACDFKGTG+VT
Sbjct: 389 LQNNINYACGFVDCKPIQSGGACFSPNSLQAHASYVMNAYYQANGHTDLACDFKGTGIVT 448

Query: 377 SSDPSYGGCKYVS 339
           SSDPSYGGCKYVS
Sbjct: 449 SSDPSYGGCKYVS 461



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>E131_ARATH (O65399) Putative glucan endo-1,3-beta-glucosidase 1 precursor (EC|
           3.2.1.39) ((1->3)-beta-glucan endohydrolase)
           ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase)
           (Beta-1,3-glucanase)
          Length = 402

 Score = 77.4 bits (189), Expect = 3e-14
 Identities = 31/71 (43%), Positives = 48/71 (67%), Gaps = 2/71 (2%)
 Frame = -2

Query: 557 LQNNINYACG--FVDCKAIQSGGACFSPNSLQSHASYVMNAYYQANGHTDSACDFKGTGV 384
           LQ  +++ACG    +C  IQ G +C+ PN+++ HAS+  N+YYQ  G    +CDFKG  +
Sbjct: 284 LQAALDWACGPGRSNCSEIQPGESCYQPNNVKGHASFAFNSYYQKEGRASGSCDFKGVAM 343

Query: 383 VTSSDPSYGGC 351
           +T++DPS+G C
Sbjct: 344 ITTTDPSHGSC 354



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>E133_ARATH (Q9ZU91) Putative glucan endo-1,3-beta-glucosidase 3 precursor (EC|
           3.2.1.39) ((1->3)-beta-glucan endohydrolase)
           ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase)
           (Beta-1,3-glucanase)
          Length = 501

 Score = 75.5 bits (184), Expect = 1e-13
 Identities = 32/73 (43%), Positives = 47/73 (64%), Gaps = 2/73 (2%)
 Frame = -2

Query: 557 LQNNINYACG--FVDCKAIQSGGACFSPNSLQSHASYVMNAYYQANGHTDSACDFKGTGV 384
           LQ  +++ACG   VDC A+  G +C+ P+ + +H++Y  NAYYQ  G    +CDFKG   
Sbjct: 372 LQAALDWACGPGKVDCSALMQGESCYEPDDVVAHSTYAFNAYYQKMGKASGSCDFKGVAT 431

Query: 383 VTSSDPSYGGCKY 345
           VT++DPS G C +
Sbjct: 432 VTTTDPSRGTCVF 444



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>E134_ARATH (Q94CD8) Putative glucan endo-1,3-beta-glucosidase 4 precursor (EC|
           3.2.1.39) ((1->3)-beta-glucan endohydrolase)
           ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase)
           (Beta-1,3-glucanase)
          Length = 505

 Score = 73.2 bits (178), Expect = 5e-13
 Identities = 33/73 (45%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
 Frame = -2

Query: 557 LQNNINYACGF--VDCKAIQSGGACFSPNSLQSHASYVMNAYYQANGHTDSACDFKGTGV 384
           L + +N+ACG    +C AIQ G  C+ PN ++SHAS+  N YYQ        CDF GT +
Sbjct: 374 LVDGLNWACGQGRANCAAIQPGQPCYLPNDVKSHASFAFNDYYQKMKSAGGTCDFDGTAI 433

Query: 383 VTSSDPSYGGCKY 345
            T+ DPSY  C Y
Sbjct: 434 TTTRDPSYRTCAY 446



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>E135_ARATH (Q9M088) Putative glucan endo-1,3-beta-glucosidase 5 precursor (EC|
           3.2.1.39) ((1->3)-beta-glucan endohydrolase)
           ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase)
           (Beta-1,3-glucanase)
          Length = 484

 Score = 66.6 bits (161), Expect = 4e-11
 Identities = 28/68 (41%), Positives = 42/68 (61%)
 Frame = -2

Query: 548 NINYACGFVDCKAIQSGGACFSPNSLQSHASYVMNAYYQANGHTDSACDFKGTGVVTSSD 369
           +++YAC   DC ++  G +C + N L  + SY  N+YYQ +   DSAC F G  +V++ D
Sbjct: 382 SVSYACDHADCTSLGYGSSCGNLN-LAQNVSYAFNSYYQVSNQLDSACKFPGLSIVSTRD 440

Query: 368 PSYGGCKY 345
           PS G CK+
Sbjct: 441 PSVGSCKF 448



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>E136_ARATH (Q93Z08) Putative glucan endo-1,3-beta-glucosidase 6 precursor (EC|
           3.2.1.39) ((1->3)-beta-glucan endohydrolase)
           ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase)
           (Beta-1,3-glucanase)
          Length = 477

 Score = 56.2 bits (134), Expect = 6e-08
 Identities = 25/67 (37%), Positives = 38/67 (56%)
 Frame = -2

Query: 545 INYACGFVDCKAIQSGGACFSPNSLQSHASYVMNAYYQANGHTDSACDFKGTGVVTSSDP 366
           ++YAC   DC ++  G +C + +  Q+  SY  N+YYQ     D+AC F     VT +DP
Sbjct: 380 VSYACSLGDCTSLGVGTSCANLDGKQN-ISYAFNSYYQIQDQLDTACKFPNISEVTKTDP 438

Query: 365 SYGGCKY 345
           S G C++
Sbjct: 439 STGTCRF 445



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>PHR1_CANAL (P43076) pH-responsive protein 1 precursor (pH-regulated protein 1)|
          Length = 548

 Score = 53.1 bits (126), Expect = 5e-07
 Identities = 28/70 (40%), Positives = 37/70 (52%), Gaps = 5/70 (7%)
 Frame = -2

Query: 533 CGFVDCKAIQSGGA-----CFSPNSLQSHASYVMNAYYQANGHTDSACDFKGTGVVTSSD 369
           CG++DC AI + G+       S  S +   SYV+N YY       SACDFKG+  + S  
Sbjct: 409 CGYIDCSAISADGSKGEYGVASFCSDKDRLSYVLNQYYLDQDKKSSACDFKGSASINSKA 468

Query: 368 PSYGGCKYVS 339
            + G CK VS
Sbjct: 469 SASGSCKAVS 478



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>PHR2_CANAL (O13318) pH-responsive protein 2 precursor (pH-regulated protein 2)|
          Length = 546

 Score = 48.1 bits (113), Expect = 2e-05
 Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 5/73 (6%)
 Frame = -2

Query: 542 NYACGFVDCKAIQSGGA-----CFSPNSLQSHASYVMNAYYQANGHTDSACDFKGTGVVT 378
           +Y C  +DC  I + G       +SP   +   S+VMN YY+ N  + SACDF G+  + 
Sbjct: 396 SYICAKIDCDGINANGTTGEYGAYSPCHSKDKLSFVMNLYYEQNKESKSACDFGGSASLQ 455

Query: 377 SSDPSYGGCKYVS 339
           S+  +     Y+S
Sbjct: 456 SAKTASSCSAYLS 468



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>EPD1_CANMA (P56092) Protein EPD1 precursor (Essential for pseudohyphal|
           development 1)
          Length = 549

 Score = 46.2 bits (108), Expect = 6e-05
 Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
 Frame = -2

Query: 542 NYACGFVDCKAIQSGGA-----CFSPNSLQSHASYVMNAYYQANGHTDSACDFKGTGVVT 378
           +Y C  +DC  I +         +SP   +   S+V+N YY+    + SACDF G+  + 
Sbjct: 394 DYVCAKIDCSGINANATTGDYGAYSPCGAKDKLSFVLNLYYEEQNESKSACDFSGSASLQ 453

Query: 377 SSDPSYGGCKYVS 339
           S+  +     Y+S
Sbjct: 454 SASTASSCAAYLS 466



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>EA6_ARATH (Q06915) Probable glucan endo-1,3-beta-glucosidase A6 precursor (EC|
           3.2.1.39) ((1->3)-beta-glucan endohydrolase)
           ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase)
           (Anther-specific protein A6)
          Length = 478

 Score = 46.2 bits (108), Expect = 6e-05
 Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
 Frame = -2

Query: 557 LQNNINYACGFVD--CKAIQSGGACFSPNSLQSHASYVMNAYYQANGHTDSACDFKGTGV 384
           L+  +  AC   +  C A+  G  C+ P S+  HASY +N+Y+    +    C F G   
Sbjct: 401 LEETLRMACAQSNTTCAALAPGRECYEPVSIYWHASYALNSYWAQFRNQSIQCFFNGLAH 460

Query: 383 VTSSDPSYGGCKYVS 339
            T+++P    CK+ S
Sbjct: 461 ETTTNPGNDRCKFPS 475



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>EPD2_CANMA (O74137) Protein EPD2 precursor (Essential for pseudohyphal|
           development 2)
          Length = 549

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
 Frame = -2

Query: 533 CGFVDCKAIQSGGAC-----FSPNSLQSHASYVMNAYYQANGHTDSACDFKGTGVVTSSD 369
           CG++DC  I + G       FS  S +   SYV+N YY        ACDF G+  +  + 
Sbjct: 409 CGYIDCGDISANGNTGEYGGFSFCSDKDRLSYVLNQYYHDQNERADACDFAGSASINDNA 468

Query: 368 PSYGGC 351
            +   C
Sbjct: 469 SASTSC 474



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>GAS1_YEAST (P22146) Glycolipid-anchored surface protein 1 precursor|
           (Glycoprotein GP115)
          Length = 559

 Score = 40.0 bits (92), Expect = 0.004
 Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
 Frame = -2

Query: 542 NYACGFVDCKAIQSGGAC-----FSPNSLQSHASYVMNAYYQANGHTDSACDFKGTGVVT 378
           N+ C  VDC  I + G       +S  + +   S+VMN YY+ +G + S C F G+  + 
Sbjct: 395 NWICNEVDCSGISANGTAGKYGAYSFCTPKEQLSFVMNLYYEKSGGSKSDCSFSGSATLQ 454

Query: 377 SS 372
           ++
Sbjct: 455 TA 456



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>YLM2_SCHPO (Q9P378) Hypothetical protein C19B12.02c precursor|
          Length = 542

 Score = 38.5 bits (88), Expect = 0.013
 Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 6/70 (8%)
 Frame = -2

Query: 542 NYACGFVDCKAIQSGGA------CFSPNSLQSHASYVMNAYYQANGHTDSACDFKGTGVV 381
           +Y C  + C  I + G        +S    +    YV++AYY A G     CDF G+  +
Sbjct: 392 SYVCNEISCDGITANGTYPGQYGSYSYCDAKQQLDYVLDAYYSAKGD----CDFSGSATL 447

Query: 380 TSSDPSYGGC 351
            S+  + G C
Sbjct: 448 VSASSATGTC 457



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>PSTA_DICDI (P11976) Prestalk protein precursor|
          Length = 1046

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 2/66 (3%)
 Frame = -2

Query: 542 NYACGFVDCKAIQSGGACFSPNSLQSHASYVMNAYYQANG--HTDSACDFKGTGVVTSSD 369
           N  C    C    S G C +P ++  H +   +   Q+ G  HT  ACD K    V S  
Sbjct: 629 NNPCTVDSCS--NSTGCCHTPINVDDHNACTEDKCTQSGGVTHTPIACDDKNACTVDSCS 686

Query: 368 PSYGGC 351
            S G C
Sbjct: 687 NSTGCC 692



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>TRPG_CAEEL (Q93971) Transient receptor potential channel (Abnormal gonad|
           development protein 2)
          Length = 2032

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
 Frame = -1

Query: 357 GLQVRLLTVRSKLRQYEGGGASLQPTTISISEPRWRQRRRTAD-TAGLAP 211
           GLQ+R     + +R   G   SL P T  I + R  +RRR+   T G+ P
Sbjct: 99  GLQMRTFQPNASIRDENGSMPSLLPRTAPIKKTRKHRRRRSGSFTGGVYP 148



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>DYR1A_RAT (Q63470) Dual specificity tyrosine-phosphorylation-regulated kinase|
           1A (EC 2.7.12.2) (Protein kinase minibrain homolog)
           (MNBH) (RP86) (Dual specificity YAK1-related kinase)
          Length = 763

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
 Frame = -3

Query: 361 TGVASTSPDGTQQATAVRGRGRQPSAHYHLHLGAAVAAATE--DC 233
           T  +++S  G    T+  GR R    H H H G   AAA +  DC
Sbjct: 507 TTSSTSSSSGGSSGTSNSGRARSDPTHQHRHSGGHFAAAVQAMDC 551



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>DYR1A_MOUSE (Q61214) Dual specificity tyrosine-phosphorylation-regulated kinase|
           1A (EC 2.7.12.1) (Protein kinase minibrain homolog)
           (MNBH) (MP86) (Dual specificity YAK1-related kinase)
          Length = 763

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
 Frame = -3

Query: 361 TGVASTSPDGTQQATAVRGRGRQPSAHYHLHLGAAVAAATE--DC 233
           T  +++S  G    T+  GR R    H H H G   AAA +  DC
Sbjct: 507 TTSSTSSSSGGSSGTSNSGRARSDPTHQHRHSGGHFAAAVQAMDC 551



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>NOTC3_RAT (Q9R172) Neurogenic locus notch homolog protein 3 precursor (Notch 3)|
            [Contains: Notch 3 extracellular truncation; Notch 3
            intracellular domain]
          Length = 2319

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
 Frame = +2

Query: 185  LSDTSIEEHGASPAVSAVLRRCRHRGSEMEMVVG*RLAPPPSY----CRSLLRTVRRRTC 352
            L + + ++ G  P++ + LR C H G+ +++V G R   PP Y    C + +   R  TC
Sbjct: 1158 LCEINEDDCGPGPSLDSGLR-CLHNGTCVDLVGGFRCNCPPGYTGLHCEADINECRPGTC 1216

Query: 353  N 355
            +
Sbjct: 1217 H 1217


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,673,276
Number of Sequences: 219361
Number of extensions: 1099785
Number of successful extensions: 2953
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 2855
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2947
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4528412720
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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