Clone Name | rbasd22k16 |
---|---|
Clone Library Name | barley_pub |
>E13B_WHEAT (P52409) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39)| ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) Length = 461 Score = 153 bits (387), Expect = 3e-37 Identities = 69/73 (94%), Positives = 71/73 (97%) Frame = -2 Query: 557 LQNNINYACGFVDCKAIQSGGACFSPNSLQSHASYVMNAYYQANGHTDSACDFKGTGVVT 378 LQNNINYACGFVDCK IQSGGACFSPNSLQ+HASYVMNAYYQANGHTD ACDFKGTG+VT Sbjct: 389 LQNNINYACGFVDCKPIQSGGACFSPNSLQAHASYVMNAYYQANGHTDLACDFKGTGIVT 448 Query: 377 SSDPSYGGCKYVS 339 SSDPSYGGCKYVS Sbjct: 449 SSDPSYGGCKYVS 461
>E131_ARATH (O65399) Putative glucan endo-1,3-beta-glucosidase 1 precursor (EC| 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (Beta-1,3-glucanase) Length = 402 Score = 77.4 bits (189), Expect = 3e-14 Identities = 31/71 (43%), Positives = 48/71 (67%), Gaps = 2/71 (2%) Frame = -2 Query: 557 LQNNINYACG--FVDCKAIQSGGACFSPNSLQSHASYVMNAYYQANGHTDSACDFKGTGV 384 LQ +++ACG +C IQ G +C+ PN+++ HAS+ N+YYQ G +CDFKG + Sbjct: 284 LQAALDWACGPGRSNCSEIQPGESCYQPNNVKGHASFAFNSYYQKEGRASGSCDFKGVAM 343 Query: 383 VTSSDPSYGGC 351 +T++DPS+G C Sbjct: 344 ITTTDPSHGSC 354
>E133_ARATH (Q9ZU91) Putative glucan endo-1,3-beta-glucosidase 3 precursor (EC| 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (Beta-1,3-glucanase) Length = 501 Score = 75.5 bits (184), Expect = 1e-13 Identities = 32/73 (43%), Positives = 47/73 (64%), Gaps = 2/73 (2%) Frame = -2 Query: 557 LQNNINYACG--FVDCKAIQSGGACFSPNSLQSHASYVMNAYYQANGHTDSACDFKGTGV 384 LQ +++ACG VDC A+ G +C+ P+ + +H++Y NAYYQ G +CDFKG Sbjct: 372 LQAALDWACGPGKVDCSALMQGESCYEPDDVVAHSTYAFNAYYQKMGKASGSCDFKGVAT 431 Query: 383 VTSSDPSYGGCKY 345 VT++DPS G C + Sbjct: 432 VTTTDPSRGTCVF 444
>E134_ARATH (Q94CD8) Putative glucan endo-1,3-beta-glucosidase 4 precursor (EC| 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (Beta-1,3-glucanase) Length = 505 Score = 73.2 bits (178), Expect = 5e-13 Identities = 33/73 (45%), Positives = 43/73 (58%), Gaps = 2/73 (2%) Frame = -2 Query: 557 LQNNINYACGF--VDCKAIQSGGACFSPNSLQSHASYVMNAYYQANGHTDSACDFKGTGV 384 L + +N+ACG +C AIQ G C+ PN ++SHAS+ N YYQ CDF GT + Sbjct: 374 LVDGLNWACGQGRANCAAIQPGQPCYLPNDVKSHASFAFNDYYQKMKSAGGTCDFDGTAI 433 Query: 383 VTSSDPSYGGCKY 345 T+ DPSY C Y Sbjct: 434 TTTRDPSYRTCAY 446
>E135_ARATH (Q9M088) Putative glucan endo-1,3-beta-glucosidase 5 precursor (EC| 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (Beta-1,3-glucanase) Length = 484 Score = 66.6 bits (161), Expect = 4e-11 Identities = 28/68 (41%), Positives = 42/68 (61%) Frame = -2 Query: 548 NINYACGFVDCKAIQSGGACFSPNSLQSHASYVMNAYYQANGHTDSACDFKGTGVVTSSD 369 +++YAC DC ++ G +C + N L + SY N+YYQ + DSAC F G +V++ D Sbjct: 382 SVSYACDHADCTSLGYGSSCGNLN-LAQNVSYAFNSYYQVSNQLDSACKFPGLSIVSTRD 440 Query: 368 PSYGGCKY 345 PS G CK+ Sbjct: 441 PSVGSCKF 448
>E136_ARATH (Q93Z08) Putative glucan endo-1,3-beta-glucosidase 6 precursor (EC| 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (Beta-1,3-glucanase) Length = 477 Score = 56.2 bits (134), Expect = 6e-08 Identities = 25/67 (37%), Positives = 38/67 (56%) Frame = -2 Query: 545 INYACGFVDCKAIQSGGACFSPNSLQSHASYVMNAYYQANGHTDSACDFKGTGVVTSSDP 366 ++YAC DC ++ G +C + + Q+ SY N+YYQ D+AC F VT +DP Sbjct: 380 VSYACSLGDCTSLGVGTSCANLDGKQN-ISYAFNSYYQIQDQLDTACKFPNISEVTKTDP 438 Query: 365 SYGGCKY 345 S G C++ Sbjct: 439 STGTCRF 445
>PHR1_CANAL (P43076) pH-responsive protein 1 precursor (pH-regulated protein 1)| Length = 548 Score = 53.1 bits (126), Expect = 5e-07 Identities = 28/70 (40%), Positives = 37/70 (52%), Gaps = 5/70 (7%) Frame = -2 Query: 533 CGFVDCKAIQSGGA-----CFSPNSLQSHASYVMNAYYQANGHTDSACDFKGTGVVTSSD 369 CG++DC AI + G+ S S + SYV+N YY SACDFKG+ + S Sbjct: 409 CGYIDCSAISADGSKGEYGVASFCSDKDRLSYVLNQYYLDQDKKSSACDFKGSASINSKA 468 Query: 368 PSYGGCKYVS 339 + G CK VS Sbjct: 469 SASGSCKAVS 478
>PHR2_CANAL (O13318) pH-responsive protein 2 precursor (pH-regulated protein 2)| Length = 546 Score = 48.1 bits (113), Expect = 2e-05 Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 5/73 (6%) Frame = -2 Query: 542 NYACGFVDCKAIQSGGA-----CFSPNSLQSHASYVMNAYYQANGHTDSACDFKGTGVVT 378 +Y C +DC I + G +SP + S+VMN YY+ N + SACDF G+ + Sbjct: 396 SYICAKIDCDGINANGTTGEYGAYSPCHSKDKLSFVMNLYYEQNKESKSACDFGGSASLQ 455 Query: 377 SSDPSYGGCKYVS 339 S+ + Y+S Sbjct: 456 SAKTASSCSAYLS 468
>EPD1_CANMA (P56092) Protein EPD1 precursor (Essential for pseudohyphal| development 1) Length = 549 Score = 46.2 bits (108), Expect = 6e-05 Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 5/73 (6%) Frame = -2 Query: 542 NYACGFVDCKAIQSGGA-----CFSPNSLQSHASYVMNAYYQANGHTDSACDFKGTGVVT 378 +Y C +DC I + +SP + S+V+N YY+ + SACDF G+ + Sbjct: 394 DYVCAKIDCSGINANATTGDYGAYSPCGAKDKLSFVLNLYYEEQNESKSACDFSGSASLQ 453 Query: 377 SSDPSYGGCKYVS 339 S+ + Y+S Sbjct: 454 SASTASSCAAYLS 466
>EA6_ARATH (Q06915) Probable glucan endo-1,3-beta-glucosidase A6 precursor (EC| 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (Anther-specific protein A6) Length = 478 Score = 46.2 bits (108), Expect = 6e-05 Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 2/75 (2%) Frame = -2 Query: 557 LQNNINYACGFVD--CKAIQSGGACFSPNSLQSHASYVMNAYYQANGHTDSACDFKGTGV 384 L+ + AC + C A+ G C+ P S+ HASY +N+Y+ + C F G Sbjct: 401 LEETLRMACAQSNTTCAALAPGRECYEPVSIYWHASYALNSYWAQFRNQSIQCFFNGLAH 460 Query: 383 VTSSDPSYGGCKYVS 339 T+++P CK+ S Sbjct: 461 ETTTNPGNDRCKFPS 475
>EPD2_CANMA (O74137) Protein EPD2 precursor (Essential for pseudohyphal| development 2) Length = 549 Score = 40.8 bits (94), Expect = 0.003 Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 5/66 (7%) Frame = -2 Query: 533 CGFVDCKAIQSGGAC-----FSPNSLQSHASYVMNAYYQANGHTDSACDFKGTGVVTSSD 369 CG++DC I + G FS S + SYV+N YY ACDF G+ + + Sbjct: 409 CGYIDCGDISANGNTGEYGGFSFCSDKDRLSYVLNQYYHDQNERADACDFAGSASINDNA 468 Query: 368 PSYGGC 351 + C Sbjct: 469 SASTSC 474
>GAS1_YEAST (P22146) Glycolipid-anchored surface protein 1 precursor| (Glycoprotein GP115) Length = 559 Score = 40.0 bits (92), Expect = 0.004 Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 5/62 (8%) Frame = -2 Query: 542 NYACGFVDCKAIQSGGAC-----FSPNSLQSHASYVMNAYYQANGHTDSACDFKGTGVVT 378 N+ C VDC I + G +S + + S+VMN YY+ +G + S C F G+ + Sbjct: 395 NWICNEVDCSGISANGTAGKYGAYSFCTPKEQLSFVMNLYYEKSGGSKSDCSFSGSATLQ 454 Query: 377 SS 372 ++ Sbjct: 455 TA 456
>YLM2_SCHPO (Q9P378) Hypothetical protein C19B12.02c precursor| Length = 542 Score = 38.5 bits (88), Expect = 0.013 Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 6/70 (8%) Frame = -2 Query: 542 NYACGFVDCKAIQSGGA------CFSPNSLQSHASYVMNAYYQANGHTDSACDFKGTGVV 381 +Y C + C I + G +S + YV++AYY A G CDF G+ + Sbjct: 392 SYVCNEISCDGITANGTYPGQYGSYSYCDAKQQLDYVLDAYYSAKGD----CDFSGSATL 447 Query: 380 TSSDPSYGGC 351 S+ + G C Sbjct: 448 VSASSATGTC 457
>PSTA_DICDI (P11976) Prestalk protein precursor| Length = 1046 Score = 31.2 bits (69), Expect = 2.1 Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 2/66 (3%) Frame = -2 Query: 542 NYACGFVDCKAIQSGGACFSPNSLQSHASYVMNAYYQANG--HTDSACDFKGTGVVTSSD 369 N C C S G C +P ++ H + + Q+ G HT ACD K V S Sbjct: 629 NNPCTVDSCS--NSTGCCHTPINVDDHNACTEDKCTQSGGVTHTPIACDDKNACTVDSCS 686 Query: 368 PSYGGC 351 S G C Sbjct: 687 NSTGCC 692
>TRPG_CAEEL (Q93971) Transient receptor potential channel (Abnormal gonad| development protein 2) Length = 2032 Score = 30.8 bits (68), Expect = 2.7 Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 1/50 (2%) Frame = -1 Query: 357 GLQVRLLTVRSKLRQYEGGGASLQPTTISISEPRWRQRRRTAD-TAGLAP 211 GLQ+R + +R G SL P T I + R +RRR+ T G+ P Sbjct: 99 GLQMRTFQPNASIRDENGSMPSLLPRTAPIKKTRKHRRRRSGSFTGGVYP 148
>DYR1A_RAT (Q63470) Dual specificity tyrosine-phosphorylation-regulated kinase| 1A (EC 2.7.12.2) (Protein kinase minibrain homolog) (MNBH) (RP86) (Dual specificity YAK1-related kinase) Length = 763 Score = 29.6 bits (65), Expect = 6.0 Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%) Frame = -3 Query: 361 TGVASTSPDGTQQATAVRGRGRQPSAHYHLHLGAAVAAATE--DC 233 T +++S G T+ GR R H H H G AAA + DC Sbjct: 507 TTSSTSSSSGGSSGTSNSGRARSDPTHQHRHSGGHFAAAVQAMDC 551
>DYR1A_MOUSE (Q61214) Dual specificity tyrosine-phosphorylation-regulated kinase| 1A (EC 2.7.12.1) (Protein kinase minibrain homolog) (MNBH) (MP86) (Dual specificity YAK1-related kinase) Length = 763 Score = 29.6 bits (65), Expect = 6.0 Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%) Frame = -3 Query: 361 TGVASTSPDGTQQATAVRGRGRQPSAHYHLHLGAAVAAATE--DC 233 T +++S G T+ GR R H H H G AAA + DC Sbjct: 507 TTSSTSSSSGGSSGTSNSGRARSDPTHQHRHSGGHFAAAVQAMDC 551
>NOTC3_RAT (Q9R172) Neurogenic locus notch homolog protein 3 precursor (Notch 3)| [Contains: Notch 3 extracellular truncation; Notch 3 intracellular domain] Length = 2319 Score = 29.6 bits (65), Expect = 6.0 Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 4/61 (6%) Frame = +2 Query: 185 LSDTSIEEHGASPAVSAVLRRCRHRGSEMEMVVG*RLAPPPSY----CRSLLRTVRRRTC 352 L + + ++ G P++ + LR C H G+ +++V G R PP Y C + + R TC Sbjct: 1158 LCEINEDDCGPGPSLDSGLR-CLHNGTCVDLVGGFRCNCPPGYTGLHCEADINECRPGTC 1216 Query: 353 N 355 + Sbjct: 1217 H 1217 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 62,673,276 Number of Sequences: 219361 Number of extensions: 1099785 Number of successful extensions: 2953 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 2855 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2947 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4528412720 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)