ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd22k16
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|U30323.1|TAU30323 Triticum aestivum beta 1,3-glucanase (Glc1)... 605 e-170
2gb|BT018818.1| Zea mays clone EL01N0532A09.d mRNA sequence 125 2e-25
3gb|AY105098.1| Zea mays PCO087970 mRNA sequence 109 1e-20
4dbj|AK100931.1| Oryza sativa (japonica cultivar-group) cDNA clon... 92 2e-15
5dbj|AK059271.1| Oryza sativa (japonica cultivar-group) cDNA clon... 92 2e-15
6dbj|AK102883.1| Oryza sativa (japonica cultivar-group) cDNA clon... 90 9e-15
7gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome... 54 5e-04
8gb|AC134045.2| Oryza sativa (japonica cultivar-group) chromosome... 54 5e-04
9dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 54 5e-04
10gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 54 5e-04
11gb|AC122697.2| Homo sapiens chromosome 5 clone CTD-2282K12, comp... 44 0.48
12gb|AC109480.3| Homo sapiens chromosome 5 clone RP11-455B3, compl... 44 0.48
13gb|AC006494.13| Drosophila melanogaster clone BACR48C17, complet... 42 1.9
14gb|AC131113.4| Mus musculus BAC clone RP24-155C13 from chromosom... 42 1.9
15emb|AL591065.17| Mouse DNA sequence from clone RP23-199H17 on ch... 42 1.9
16ref|NM_176539.1| Drosophila melanogaster CG33110-RA (CG33110), mRNA 42 1.9
17gb|AC008197.3|AC008197 Drosophila melanogaster, chromosome 3R, r... 42 1.9
18gb|AF466200.2| Sorghum bicolor putative protein kinase gene, par... 42 1.9
19gb|AY555142.1| Zea mays BAC clone c573F08, complete sequence 42 1.9
20emb|BX321877.7| Zebrafish DNA sequence from clone DKEYP-27B10 in... 42 1.9
21gb|AE003739.3| Drosophila melanogaster chromosome 3R, section 77... 42 1.9
22emb|AL132711.5|CNS01DTC Human chromosome 14 DNA sequence BAC R-5... 42 1.9
23dbj|AP005240.2| Homo sapiens genomic DNA, chromosome 18 clone:RP... 42 1.9
24emb|AL163974.7|CNS05TBT Human chromosome 14 DNA sequence Partial... 42 1.9
25gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence 40 7.6
26gb|AY596296.1| Haloarcula marismortui ATCC 43049 plasmid pNG700,... 40 7.6
27gb|AY238342.1| Rattus norvegicus erythroid spectrin alpha mRNA, ... 40 7.6
28ref|XM_752307.1| Ustilago maydis 521 hypothetical protein (UM012... 40 7.6
29gb|AC124441.5| Mus musculus BAC clone RP24-176L17 from chromosom... 40 7.6
30gb|AC121908.3| Mus musculus BAC clone RP24-176J10 from chromosom... 40 7.6
31gb|AC122031.2| Mus musculus BAC clone RP24-401P10 from 6, comple... 40 7.6
32ref|XM_735478.1| Plasmodium chabaudi chabaudi hypothetical prote... 40 7.6
33gb|AC140722.11| Medicago truncatula clone mth2-14e20, complete s... 40 7.6
34emb|AL445216.6| Human DNA sequence from clone RP11-204N9 on chro... 40 7.6
35emb|CR382121.1| Kluyveromyces lactis strain NRRL Y-1140 chromoso... 40 7.6
36gb|AF478427.1| Drosophila polychaeta cytochrome oxidase subunit ... 40 7.6
37dbj|AB228383.1| Aspergillus oryzae cDNA, contig sequence: AoEST5256 40 7.6
38gb|AC007537.3| Homo sapiens 12 BAC RPCI11-267J23 (Roswell Park C... 40 7.6
39dbj|AP007154.1| Aspergillus oryzae RIB40 genomic DNA, SC001 40 7.6
40dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005 40 7.6
41gb|CP000232.1| Moorella thermoacetica ATCC 39073, complete genome 40 7.6
42gb|DQ350725.1| Ajellomyces capsulatus nitrosative stress induced... 40 7.6
43gb|AC005991.1| Aspergillus parasiticus clone ap0, complete sequence 40 7.6
44gb|AE014847.1| Plasmodium falciparum 3D7 chromosome 12, section ... 40 7.6
45emb|BX255909.5| Zebrafish DNA sequence from clone CH211-235O3 in... 40 7.6
46gb|AC145419.3| Dasypus novemcinctus clone VMRC5-468K1, complete ... 40 7.6
47ref|NM_001011908.1| Rattus norvegicus spectrin alpha 1 (Spna1), ... 40 7.6
48emb|Z77656.1|CEF07B10 Caenorhabditis elegans Cosmid F07B10, comp... 40 7.6
49emb|Z74043.1|CET19B10 Caenorhabditis elegans Cosmid T19B10, comp... 40 7.6 
>gb|U30323.1|TAU30323 Triticum aestivum beta 1,3-glucanase (Glc1) mRNA, complete cds
          Length = 2072

 Score =  605 bits (305), Expect = e-170
 Identities = 358/376 (95%)
 Strand = Plus / Minus

                                                                        
Query: 183  ggctgtcagacacgagtatagaagaacatggcgcaagcccggcagtatcagcagtcctcc 242
            |||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||
Sbjct: 1574 ggctgtcagacacgagtatagaagaatatggcgcaagcccggcagtatgagcagtcctcc 1515

                                                                        
Query: 243  gtcgctgccgccaccgcggctccgagatggagatggtagtgggctgaaggctggcgcccc 302
            |||||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||
Sbjct: 1514 gtcgctgccgccaccgcggctccgagctggagatggtagtgggctggaggctggcccccc 1455

                                                                        
Query: 303  cgccctcgtactgccgtagcttgctgcgtaccgtcaggagacgtacttgcaacccccgta 362
             |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1454 tgccctcgtactgccgtggcttgctgcgtaccgtcaggagacgtacttgcaacccccgta 1395

                                                                        
Query: 363  actggggtcgctggacgtgacgacgccggtgcccttgaagtcgcacgccgagtcggtgtg 422
            ||||||||||||||| ||||||| ||||||||||||||||||||||||  ||||||||||
Sbjct: 1394 actggggtcgctggaggtgacgatgccggtgcccttgaagtcgcacgctaagtcggtgtg 1335

                                                                        
Query: 423  gccgttggcctggtagtaggcgttcatcacgtacgacgcatgagactgcaagctgttggg 482
            |||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||||
Sbjct: 1334 gccgttggcctggtagtaggcgttcatcacgtacgacgcatgggcctgcaggctgttggg 1275

                                                                        
Query: 483  gctgaagcaggcgccgccgctctgtatcgccttgcagtctacgaagccgcangcgtagtt 542
            ||||||||| ||||||||||||||||| | ||||||||||||||||||||| ||||||||
Sbjct: 1274 gctgaagcacgcgccgccgctctgtatgggcttgcagtctacgaagccgcaggcgtagtt 1215

                            
Query: 543  gatgttgttctgcagg 558
            ||||||||||||||||
Sbjct: 1214 gatgttgttctgcagg 1199
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>gb|BT018818.1| Zea mays clone EL01N0532A09.d mRNA sequence
          Length = 1682

 Score =  125 bits (63), Expect = 2e-25
 Identities = 167/202 (82%)
 Strand = Plus / Minus

                                                                        
Query: 357  cccgtaactggggtcgctggacgtgacgacgccggtgcccttgaagtcgcacgccgagtc 416
            ||||||||||||||| ||||| ||||| |||||||||||||||||||||||  |  ||||
Sbjct: 1278 cccgtaactggggtcactggaggtgaccacgccggtgcccttgaagtcgcagtcatagtc 1219

                                                                        
Query: 417  ggtgtggccgttggcctggtagtaggcgttcatcacgtacgacgcatgagactgcaagct 476
            |     ||| |||||||||||||| |||||||| |||||||| ||||| || || | | |
Sbjct: 1218 gtgcatgccattggcctggtagtacgcgttcatgacgtacgaggcatgtgagtggatgtt 1159

                                                                        
Query: 477  gttggggctgaagcaggcgccgccgctctgtatcgccttgcagtctacgaagccgcangc 536
            |||||||   ||||| |||||||||||||| |||| | | ||||| ||| || | || ||
Sbjct: 1158 gttggggtccaagcacgcgccgccgctctggatcggcctacagtcgacgtaggcacaggc 1099

                                  
Query: 537  gtagttgatgttgttctgcagg 558
            |||||| |||||||||||||||
Sbjct: 1098 gtagttaatgttgttctgcagg 1077



 Score = 48.1 bits (24), Expect = 0.031
 Identities = 45/52 (86%)
 Strand = Plus / Minus

                                                                
Query: 174  aagaagcatggctgtcagacacgagtatagaagaacatggcgcaagcccggc 225
            ||||||||||| ||| ||||| ||||||| ||| |  |||||||||||||||
Sbjct: 1470 aagaagcatgggtgtgagacatgagtatacaagtatgtggcgcaagcccggc 1419
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>gb|AY105098.1| Zea mays PCO087970 mRNA sequence
          Length = 926

 Score =  109 bits (55), Expect = 1e-20
 Identities = 165/202 (81%)
 Strand = Plus / Minus

                                                                       
Query: 357 cccgtaactggggtcgctggacgtgacgacgccggtgcccttgaagtcgcacgccgagtc 416
           ||||||||||||||| ||||| ||||| || ||||||||||||||||||||  |  ||||
Sbjct: 537 cccgtaactggggtcactggaggtgaccacaccggtgcccttgaagtcgcagtcatagtc 478

                                                                       
Query: 417 ggtgtggccgttggcctggtagtaggcgttcatcacgtacgacgcatgagactgcaagct 476
           |     ||| |||||||||||||| |||||||| |||||||| ||||| || || | | |
Sbjct: 477 gtgcatgccattggcctggtagtacgcgttcatgacgtacgaggcatgtgagtggatgtt 418

                                                                       
Query: 477 gttggggctgaagcaggcgccgccgctctgtatcgccttgcagtctacgaagccgcangc 536
           |||||||   ||||| |||||||||||||| |||| | | ||||| ||| || | || ||
Sbjct: 417 gttggggtccaagcacgcgccgccgctctggatcggcctacagtcgacgtaggcacaggc 358

                                 
Query: 537 gtagttgatgttgttctgcagg 558
           |||||| ||||| |||||||||
Sbjct: 357 gtagttaatgttattctgcagg 336



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                               
Query: 174 aagaagcatggctgtcagacacgagtatagaagaacatggcgcaagcccggc 225
           ||||| ||||| ||| ||||| ||||||| ||| |  |||||||||||||||
Sbjct: 730 aagaaacatgggtgtgagacatgagtatacaagtatgtggcgcaagcccggc 679
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>dbj|AK100931.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023135K21, full
            insert sequence
          Length = 1663

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 195/245 (79%)
 Strand = Plus / Minus

                                                                        
Query: 312  actgccgtagcttgctgcgtaccgtcaggagacgtacttgcaacccccgtaactggggtc 371
            |||||| | ||||||||||| ||||||||||||||| ||||| | |||||| || |||||
Sbjct: 1348 actgccatggcttgctgcgtcccgtcaggagacgtatttgcagctcccgtagctagggtc 1289

                                                                        
Query: 372  gctggacgtgacgacgccggtgcccttgaagtcgcacgccgagtcggtgtggccgttggc 431
              |||| |||||  ||||||||||||||||||||||  |  |||||    | ||||||||
Sbjct: 1288 attggaggtgaccgcgccggtgcccttgaagtcgcaatcgtagtcgtgccgcccgttggc 1229

                                                                        
Query: 432  ctggtagtaggcgttcatcacgtacgacgcatgagactgcaagctgttggggctgaagca 491
            ||||||| |||| ||||||||  | |  ||||| ||||||| | |||| ||    |||||
Sbjct: 1228 ctggtagaaggcattcatcacaaatgcagcatgggactgcacgttgttcggatcaaagca 1169

                                                                        
Query: 492  ggcgccgccgctctgtatcgccttgcagtctacgaagccgcangcgtagttgatgttgtt 551
             ||||| || || ||||||| ||| ||||| ||  |||| || || ||||| ||||||||
Sbjct: 1168 tgcgccaccactttgtatcggcttacagtccacatagccacaggcatagttaatgttgtt 1109

                 
Query: 552  ctgca 556
            |||||
Sbjct: 1108 ctgca 1104
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>dbj|AK059271.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-B11, full
            insert sequence
          Length = 1704

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 195/245 (79%)
 Strand = Plus / Minus

                                                                        
Query: 312  actgccgtagcttgctgcgtaccgtcaggagacgtacttgcaacccccgtaactggggtc 371
            |||||| | ||||||||||| ||||||||||||||| ||||| | |||||| || |||||
Sbjct: 1475 actgccatggcttgctgcgtcccgtcaggagacgtatttgcagctcccgtagctagggtc 1416

                                                                        
Query: 372  gctggacgtgacgacgccggtgcccttgaagtcgcacgccgagtcggtgtggccgttggc 431
              |||| |||||  ||||||||||||||||||||||  |  |||||    | ||||||||
Sbjct: 1415 attggaggtgaccgcgccggtgcccttgaagtcgcaatcgtagtcgtgccgcccgttggc 1356

                                                                        
Query: 432  ctggtagtaggcgttcatcacgtacgacgcatgagactgcaagctgttggggctgaagca 491
            ||||||| |||| ||||||||  | |  ||||| ||||||| | |||| ||    |||||
Sbjct: 1355 ctggtagaaggcattcatcacaaatgcagcatgggactgcacgttgttcggatcaaagca 1296

                                                                        
Query: 492  ggcgccgccgctctgtatcgccttgcagtctacgaagccgcangcgtagttgatgttgtt 551
             ||||| || || ||||||| ||| ||||| ||  |||| || || ||||| ||||||||
Sbjct: 1295 tgcgccaccactttgtatcggcttacagtccacatagccacaggcatagttaatgttgtt 1236

                 
Query: 552  ctgca 556
            |||||
Sbjct: 1235 ctgca 1231
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>dbj|AK102883.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033112J01, full
            insert sequence
          Length = 1876

 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 117/141 (82%)
 Strand = Plus / Minus

                                                                        
Query: 312  actgccgtagcttgctgcgtaccgtcaggagacgtacttgcaacccccgtaactggggtc 371
            |||||| | ||||||||||| ||||||||||||||| ||||| | |||||| || |||||
Sbjct: 1592 actgccatggcttgctgcgtcccgtcaggagacgtatttgcagctcccgtagctagggtc 1533

                                                                        
Query: 372  gctggacgtgacgacgccggtgcccttgaagtcgcacgccgagtcggtgtggccgttggc 431
              |||| |||||  ||||||||||||||||||||||  |  |||||    | ||||||||
Sbjct: 1532 attggaggtgaccgcgccggtgcccttgaagtcgcaatcgtagtcgtgccgcccgttggc 1473

                                 
Query: 432  ctggtagtaggcgttcatcac 452
            ||||||| |||| ||||||||
Sbjct: 1472 ctggtagaaggcattcatcac 1452
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>gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0003C04 map S10003, complete sequence
          Length = 119238

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                                
Query: 312   actgccgtagcttgctgcgtaccgtcaggagacgtacttgcaacccccgta 362
             |||||| | ||||||||||| ||||||||||||||| ||||| | ||||||
Sbjct: 13187 actgccatggcttgctgcgtcccgtcaggagacgtatttgcagctcccgta 13237



 Score = 48.1 bits (24), Expect = 0.031
 Identities = 134/171 (78%)
 Strand = Plus / Plus

                                                                         
Query: 386   cgccggtgcccttgaagtcgcacgccgagtcggtgtggccgttggcctggtagtaggcgt 445
             ||||||||||||||||||||||  |  |||||    | ||||||||||||||| |||| |
Sbjct: 13422 cgccggtgcccttgaagtcgcaatcgtagtcgtgccgcccgttggcctggtagaaggcat 13481

                                                                         
Query: 446   tcatcacgtacgacgcatgagactgcaagctgttggggctgaagcaggcgccgccgctct 505
             |||||||  | |  ||||| ||||||| | |||| ||    ||||| ||||| || || |
Sbjct: 13482 tcatcacaaatgcagcatgggactgcacgttgttcggatcaaagcatgcgccaccacttt 13541

                                                                
Query: 506   gtatcgccttgcagtctacgaagccgcangcgtagttgatgttgttctgca 556
             |||||| ||| ||||| ||  |||| || || ||||| |||||||||||||
Sbjct: 13542 gtatcggcttacagtccacatagccacaggcatagttaatgttgttctgca 13592
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>gb|AC134045.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0022E16
              map C481S, complete sequence
          Length = 179668

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                                 
Query: 312    actgccgtagcttgctgcgtaccgtcaggagacgtacttgcaacccccgta 362
              |||||| | ||||||||||| ||||||||||||||| ||||| | ||||||
Sbjct: 166622 actgccatggcttgctgcgtcccgtcaggagacgtatttgcagctcccgta 166672



 Score = 48.1 bits (24), Expect = 0.031
 Identities = 134/171 (78%)
 Strand = Plus / Plus

                                                                          
Query: 386    cgccggtgcccttgaagtcgcacgccgagtcggtgtggccgttggcctggtagtaggcgt 445
              ||||||||||||||||||||||  |  |||||    | ||||||||||||||| |||| |
Sbjct: 166857 cgccggtgcccttgaagtcgcaatcgtagtcgtgccgcccgttggcctggtagaaggcat 166916

                                                                          
Query: 446    tcatcacgtacgacgcatgagactgcaagctgttggggctgaagcaggcgccgccgctct 505
              |||||||  | |  ||||| ||||||| | |||| ||    ||||| ||||| || || |
Sbjct: 166917 tcatcacaaatgcagcatgggactgcacgttgttcggatcaaagcatgcgccaccacttt 166976

                                                                 
Query: 506    gtatcgccttgcagtctacgaagccgcangcgtagttgatgttgttctgca 556
              |||||| ||| ||||| ||  |||| || || ||||| |||||||||||||
Sbjct: 166977 gtatcggcttacagtccacatagccacaggcatagttaatgttgttctgca 167027
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                                   
Query: 312      actgccgtagcttgctgcgtaccgtcaggagacgtacttgcaacccccgta 362
                |||||| | ||||||||||| ||||||||||||||| ||||| | ||||||
Sbjct: 28208086 actgccatggcttgctgcgtcccgtcaggagacgtatttgcagctcccgta 28208136



 Score = 48.1 bits (24), Expect = 0.031
 Identities = 134/171 (78%)
 Strand = Plus / Plus

                                                                            
Query: 386      cgccggtgcccttgaagtcgcacgccgagtcggtgtggccgttggcctggtagtaggcgt 445
                ||||||||||||||||||||||  |  |||||    | ||||||||||||||| |||| |
Sbjct: 28208321 cgccggtgcccttgaagtcgcaatcgtagtcgtgccgcccgttggcctggtagaaggcat 28208380

                                                                            
Query: 446      tcatcacgtacgacgcatgagactgcaagctgttggggctgaagcaggcgccgccgctct 505
                |||||||  | |  ||||| ||||||| | |||| ||    ||||| ||||| || || |
Sbjct: 28208381 tcatcacaaatgcagcatgggactgcacgttgttcggatcaaagcatgcgccaccacttt 28208440

                                                                   
Query: 506      gtatcgccttgcagtctacgaagccgcangcgtagttgatgttgttctgca 556
                |||||| ||| ||||| ||  |||| || || ||||| |||||||||||||
Sbjct: 28208441 gtatcggcttacagtccacatagccacaggcatagttaatgttgttctgca 28208491
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                                   
Query: 312      actgccgtagcttgctgcgtaccgtcaggagacgtacttgcaacccccgta 362
                |||||| | ||||||||||| ||||||||||||||| ||||| | ||||||
Sbjct: 28192964 actgccatggcttgctgcgtcccgtcaggagacgtatttgcagctcccgta 28193014



 Score = 48.1 bits (24), Expect = 0.031
 Identities = 134/171 (78%)
 Strand = Plus / Plus

                                                                            
Query: 386      cgccggtgcccttgaagtcgcacgccgagtcggtgtggccgttggcctggtagtaggcgt 445
                ||||||||||||||||||||||  |  |||||    | ||||||||||||||| |||| |
Sbjct: 28193199 cgccggtgcccttgaagtcgcaatcgtagtcgtgccgcccgttggcctggtagaaggcat 28193258

                                                                            
Query: 446      tcatcacgtacgacgcatgagactgcaagctgttggggctgaagcaggcgccgccgctct 505
                |||||||  | |  ||||| ||||||| | |||| ||    ||||| ||||| || || |
Sbjct: 28193259 tcatcacaaatgcagcatgggactgcacgttgttcggatcaaagcatgcgccaccacttt 28193318

                                                                   
Query: 506      gtatcgccttgcagtctacgaagccgcangcgtagttgatgttgttctgca 556
                |||||| ||| ||||| ||  |||| || || ||||| |||||||||||||
Sbjct: 28193319 gtatcggcttacagtccacatagccacaggcatagttaatgttgttctgca 28193369
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>gb|AC122697.2| Homo sapiens chromosome 5 clone CTD-2282K12, complete sequence
          Length = 91822

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 48    cagaagagaacgaaaaataaattaat 73
             ||||||||| ||||||||||||||||
Sbjct: 26760 cagaagagaccgaaaaataaattaat 26785
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>gb|AC109480.3| Homo sapiens chromosome 5 clone RP11-455B3, complete sequence
          Length = 191923

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 48     cagaagagaacgaaaaataaattaat 73
              ||||||||| ||||||||||||||||
Sbjct: 168176 cagaagagaccgaaaaataaattaat 168201
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>gb|AC006494.13| Drosophila melanogaster clone BACR48C17, complete sequence
          Length = 164501

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 41     acaaccacagaagagaacgaa 61
              |||||||||||||||||||||
Sbjct: 156014 acaaccacagaagagaacgaa 156034
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>gb|AC131113.4| Mus musculus BAC clone RP24-155C13 from chromosome 3, complete sequence
          Length = 173268

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 155    tttatgactagaaaggaagaa 175
              |||||||||||||||||||||
Sbjct: 126236 tttatgactagaaaggaagaa 126256
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>emb|AL591065.17| Mouse DNA sequence from clone RP23-199H17 on chromosome 11 Contains the
              Myo18a gene for myosin XVIIIa, the Pipox gene for pipecolic
              acid oxidase, a novel gene (LOC327969), the 5' end of the
              Sez6 gene for seizure related gene 6 and two CpG islands,
              complete sequence
          Length = 220176

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 12     ttattgtattttctacatgaa 32
              |||||||||||||||||||||
Sbjct: 160625 ttattgtattttctacatgaa 160645
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>ref|NM_176539.1| Drosophila melanogaster CG33110-RA (CG33110), mRNA
          Length = 2010

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 41   acaaccacagaagagaacgaa 61
            |||||||||||||||||||||
Sbjct: 1521 acaaccacagaagagaacgaa 1541
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>gb|AC008197.3|AC008197 Drosophila melanogaster, chromosome 3R, region 94B-94C, BAC clone
             BACR02L12, complete sequence
          Length = 178931

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 41    acaaccacagaagagaacgaa 61
             |||||||||||||||||||||
Sbjct: 25331 acaaccacagaagagaacgaa 25351
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>gb|AF466200.2| Sorghum bicolor putative protein kinase gene, partial cds; putative Cf-2,
              fertilization-independent endosperm proteins, hypothetical
              protein, putative non-LTR retroelement reverse
              transcriptase, OCL5 protein, tryptophan synthase
              beta-subunit, hypothetical proteins, putative AP
              endonuclease, putative RNA polymerase II complex component
              SRB7, putative beta-1,3-glucanase, hypothetical protein,
              TNP2-like protein, hypothetical protein, putative
              phosphate/phosphoenolpyruvate translocator, putative
              protein, hypothetical proteins, putative
              galactosyltransferase family, hypothetical protein,
              putative cytochrome P450 family, putative lipid transfer
              protein, putative photoreceptor-interacting protein, and
              hypothetical protein genes, complete cds; and hypothetical
              protein gene, partial cds
          Length = 202197

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 429    ggcctggtagtaggcgttcat 449
              |||||||||||||||||||||
Sbjct: 111901 ggcctggtagtaggcgttcat 111921
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>gb|AY555142.1| Zea mays BAC clone c573F08, complete sequence
          Length = 181627

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 429    ggcctggtagtaggcgttcat 449
              |||||||||||||||||||||
Sbjct: 145941 ggcctggtagtaggcgttcat 145961
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>emb|BX321877.7| Zebrafish DNA sequence from clone DKEYP-27B10 in linkage group 18,
             complete sequence
          Length = 127643

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 142   attgatatttatatttatgac 162
             |||||||||||||||||||||
Sbjct: 86122 attgatatttatatttatgac 86102
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>gb|AE003739.3| Drosophila melanogaster chromosome 3R, section 77 of 118 of the complete
              sequence
          Length = 224856

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 41     acaaccacagaagagaacgaa 61
              |||||||||||||||||||||
Sbjct: 158841 acaaccacagaagagaacgaa 158861
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>emb|AL132711.5|CNS01DTC Human chromosome 14 DNA sequence BAC R-566J3 of library RPCI-11 from
            chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 185799

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 468  ctgcaagctgttggggctgaagcaggcgccgcc 500
            |||||||||| ||| ||||||||||| ||||||
Sbjct: 4788 ctgcaagctgctggagctgaagcaggagccgcc 4756
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>dbj|AP005240.2| Homo sapiens genomic DNA, chromosome 18 clone:RP11-14P20, complete
             sequence
          Length = 98739

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 126   aagctaagaggcgatgattgatatt 150
             |||||||||||| ||||||||||||
Sbjct: 10309 aagctaagaggcaatgattgatatt 10333
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>emb|AL163974.7|CNS05TBT Human chromosome 14 DNA sequence Partial sequence from BAC C-2644I21 of
             library CalTech-D from chromosome 14 of Homo sapiens
             (Human), complete sequence
          Length = 73471

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 468   ctgcaagctgttggggctgaagcaggcgccgcc 500
             |||||||||| ||| ||||||||||| ||||||
Sbjct: 64323 ctgcaagctgctggagctgaagcaggagccgcc 64355
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>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 429     ggcctggtagtaggcgttca 448
               ||||||||||||||||||||
Sbjct: 3094774 ggcctggtagtaggcgttca 3094755
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>gb|AY596296.1| Haloarcula marismortui ATCC 43049 plasmid pNG700, complete sequence
          Length = 410554

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 241    ccgtcgctgccgccaccgcggctc 264
              ||||||||||||||||||| ||||
Sbjct: 354930 ccgtcgctgccgccaccgccgctc 354953
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>gb|AY238342.1| Rattus norvegicus erythroid spectrin alpha mRNA, complete cds
          Length = 7842

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 168  aggaagaagaagcatggctg 187
            ||||||||||||||||||||
Sbjct: 5663 aggaagaagaagcatggctg 5682
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>ref|XM_752307.1| Ustilago maydis 521 hypothetical protein (UM01253.1) partial mRNA
          Length = 3597

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 268  gatggagatggtagtgggct 287
            ||||||||||||||||||||
Sbjct: 1706 gatggagatggtagtgggct 1687
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>gb|AC124441.5| Mus musculus BAC clone RP24-176L17 from chromosome 18, complete sequence
          Length = 190119

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 13     tattgtattttctacatgaa 32
              ||||||||||||||||||||
Sbjct: 122788 tattgtattttctacatgaa 122769
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>gb|AC121908.3| Mus musculus BAC clone RP24-176J10 from chromosome 3, complete sequence
          Length = 162777

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 145   gatatttatatttatgacta 164
             ||||||||||||||||||||
Sbjct: 87344 gatatttatatttatgacta 87363
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>gb|AC122031.2| Mus musculus BAC clone RP24-401P10 from 6, complete sequence
          Length = 157782

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 43    aaccacagaagagaacgaaaaata 66
             ||||||||||||||| ||||||||
Sbjct: 46625 aaccacagaagagaaagaaaaata 46648
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>ref|XM_735478.1| Plasmodium chabaudi chabaudi hypothetical protein (PC300801.00.0)
           partial mRNA
          Length = 1452

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 7   ttcgtttattgtattttcta 26
           ||||||||||||||||||||
Sbjct: 783 ttcgtttattgtattttcta 764
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>gb|AC140722.11| Medicago truncatula clone mth2-14e20, complete sequence
          Length = 97982

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 51    aagagaacgaaaaataaatt 70
             ||||||||||||||||||||
Sbjct: 46340 aagagaacgaaaaataaatt 46321
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>emb|AL445216.6| Human DNA sequence from clone RP11-204N9 on chromosome 13 Contains the
             3' end of the PCDH17 gene for protocadherin 17 (PCH68
             PCDH68), complete sequence
          Length = 99292

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 139   atgattgatatttatattta 158
             ||||||||||||||||||||
Sbjct: 60169 atgattgatatttatattta 60188
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>emb|CR382121.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome A of strain NRRL
              Y-1140 of Kluyveromyces lactis
          Length = 1062590

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 471    caagctgttggggctgaagc 490
              ||||||||||||||||||||
Sbjct: 141973 caagctgttggggctgaagc 141954
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>gb|AF478427.1| Drosophila polychaeta cytochrome oxidase subunit 2 (COII) gene,
           partial cds; mitochondrial gene for mitochondrial
           product
          Length = 688

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 7   ttcgtttattgtattttctacatgaaat 34
           |||||||||||||||| ||| |||||||
Sbjct: 242 ttcgtttattgtatttactagatgaaat 269
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>dbj|AB228383.1| Aspergillus oryzae cDNA, contig sequence: AoEST5256
          Length = 449

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 214 cgcaagcccggcagtatcag 233
           ||||||||||||||||||||
Sbjct: 395 cgcaagcccggcagtatcag 414
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>gb|AC007537.3| Homo sapiens 12 BAC RPCI11-267J23 (Roswell Park Cancer Institute Human
              BAC Library) complete sequence
          Length = 190858

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 160    gactagaaaggaagaagaag 179
              ||||||||||||||||||||
Sbjct: 110319 gactagaaaggaagaagaag 110338
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>dbj|AP007154.1| Aspergillus oryzae RIB40 genomic DNA, SC001
          Length = 2005935

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 394    cccttgaagtcgcacgccga 413
              ||||||||||||||||||||
Sbjct: 195036 cccttgaagtcgcacgccga 195017
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>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005
          Length = 4429080

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 214     cgcaagcccggcagtatcag 233
               ||||||||||||||||||||
Sbjct: 3502192 cgcaagcccggcagtatcag 3502211
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>gb|CP000232.1| Moorella thermoacetica ATCC 39073, complete genome
          Length = 2628784

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 131     aagaggcgatgattgatatt 150
               ||||||||||||||||||||
Sbjct: 1542019 aagaggcgatgattgatatt 1542000
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>gb|DQ350725.1| Ajellomyces capsulatus nitrosative stress induced transcription 71
           (NIT71) gene, partial sequence
          Length = 1402

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 342 gacgtacttgcaacccccgt 361
           ||||||||||||||||||||
Sbjct: 444 gacgtacttgcaacccccgt 425
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>gb|AC005991.1| Aspergillus parasiticus clone ap0, complete sequence
          Length = 37754

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 394   cccttgaagtcgcacgccga 413
             ||||||||||||||||||||
Sbjct: 15737 cccttgaagtcgcacgccga 15756
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>gb|AE014847.1| Plasmodium falciparum 3D7 chromosome 12, section 4 of 9 of the complete
              sequence
          Length = 252650

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 142    attgatatttatatttatga 161
              ||||||||||||||||||||
Sbjct: 135002 attgatatttatatttatga 135021
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>emb|BX255909.5| Zebrafish DNA sequence from clone CH211-235O3 in linkage group 19,
              complete sequence
          Length = 180994

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 11     tttattgtattttctacatg 30
              ||||||||||||||||||||
Sbjct: 127180 tttattgtattttctacatg 127161
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>gb|AC145419.3| Dasypus novemcinctus clone VMRC5-468K1, complete sequence
          Length = 151116

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 16     tgtattttctacatgaaatgcaat 39
              ||||||||||||||| ||||||||
Sbjct: 121104 tgtattttctacatgcaatgcaat 121081
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>ref|NM_001011908.1| Rattus norvegicus spectrin alpha 1 (Spna1), mRNA
          Length = 7842

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 168  aggaagaagaagcatggctg 187
            ||||||||||||||||||||
Sbjct: 5663 aggaagaagaagcatggctg 5682
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>emb|Z77656.1|CEF07B10 Caenorhabditis elegans Cosmid F07B10, complete sequence
          Length = 17602

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 56  aacgaaaaataaattaatgc 75
           ||||||||||||||||||||
Sbjct: 897 aacgaaaaataaattaatgc 878
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>emb|Z74043.1|CET19B10 Caenorhabditis elegans Cosmid T19B10, complete sequence
          Length = 35888

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 56    aacgaaaaataaattaatgc 75
             ||||||||||||||||||||
Sbjct: 34824 aacgaaaaataaattaatgc 34805


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,058,313
Number of Sequences: 3902068
Number of extensions: 5058313
Number of successful extensions: 126574
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 126256
Number of HSP's gapped (non-prelim): 318
length of query: 558
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 535
effective length of database: 17,143,297,704
effective search space: 9171664271640
effective search space used: 9171664271640
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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