ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd22k01 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_477056.1| Oryza sativa (japonica cultivar-group), mRNA Length = 690 Score = 107 bits (54), Expect = 4e-20 Identities = 95/108 (87%), Gaps = 3/108 (2%) Strand = Plus / Minus Query: 447 cgccgacgaggaacacgcagacggtggccgccgcc---accccgaacgagcaaagcgccc 503 ||||||||||||| |||||||||||||| || || || ||||||||||| ||||||| Sbjct: 499 cgccgacgaggaagacgcagacggtggcggcggcggcgacgccgaacgagcacagcgccc 440 Query: 504 cgaccgcgttcacgcgcagcttccccacgctgaacaccacgcactccg 551 ||| | ||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 439 cgatcccgttcacccgcagcttccccaccctgaacaccacgcactccg 392 Score = 105 bits (53), Expect = 2e-19 Identities = 110/129 (85%) Strand = Plus / Minus Query: 254 aagccgtcgtagaagccaccgaacgatatgttggcccttgtggacgcgcctgcccccatc 313 ||||| || ||| ||||||| ||||||||||| ||||| || || | || | |||||| Sbjct: 686 aagccctcatagtagccaccaaacgatatgtttgccctagttgagccaccccctcccatc 627 Query: 314 atagatgacatggcctggttcagcctcgatgtctgctgcaccacctgctgaattctctta 373 | ||||||||| |||||||||||||| |||||||||||||| |||||||| |||||||| Sbjct: 626 acagatgacattgcctggttcagccttgatgtctgctgcacaacctgctgcattctcttg 567 Query: 374 tcatcgcca 382 ||||||||| Sbjct: 566 tcatcgcca 558
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 107 bits (54), Expect = 4e-20 Identities = 95/108 (87%), Gaps = 3/108 (2%) Strand = Plus / Minus Query: 447 cgccgacgaggaacacgcagacggtggccgccgcc---accccgaacgagcaaagcgccc 503 ||||||||||||| |||||||||||||| || || || ||||||||||| ||||||| Sbjct: 5631611 cgccgacgaggaagacgcagacggtggcggcggcggcgacgccgaacgagcacagcgccc 5631552 Query: 504 cgaccgcgttcacgcgcagcttccccacgctgaacaccacgcactccg 551 ||| | ||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 5631551 cgatcccgttcacccgcagcttccccaccctgaacaccacgcactccg 5631504 Score = 95.6 bits (48), Expect = 2e-16 Identities = 105/124 (84%) Strand = Plus / Minus Query: 248 gatcagaagccgtcgtagaagccaccgaacgatatgttggcccttgtggacgcgcctgcc 307 ||||| ||||| || ||| ||||||| ||||||||||| ||||| || || | || | Sbjct: 5632576 gatcaaaagccctcatagtagccaccaaacgatatgtttgccctagttgagccaccccct 5632517 Query: 308 cccatcatagatgacatggcctggttcagcctcgatgtctgctgcaccacctgctgaatt 367 ||||||| ||||||||| |||||||||||||| |||||||||||||| |||||||| ||| Sbjct: 5632516 cccatcacagatgacattgcctggttcagccttgatgtctgctgcacaacctgctgcatt 5632457 Query: 368 ctct 371 |||| Sbjct: 5632456 ctct 5632453
>dbj|AP004273.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0431A02 Length = 165038 Score = 107 bits (54), Expect = 4e-20 Identities = 95/108 (87%), Gaps = 3/108 (2%) Strand = Plus / Minus Query: 447 cgccgacgaggaacacgcagacggtggccgccgcc---accccgaacgagcaaagcgccc 503 ||||||||||||| |||||||||||||| || || || ||||||||||| ||||||| Sbjct: 93303 cgccgacgaggaagacgcagacggtggcggcggcggcgacgccgaacgagcacagcgccc 93244 Query: 504 cgaccgcgttcacgcgcagcttccccacgctgaacaccacgcactccg 551 ||| | ||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 93243 cgatcccgttcacccgcagcttccccaccctgaacaccacgcactccg 93196 Score = 95.6 bits (48), Expect = 2e-16 Identities = 105/124 (84%) Strand = Plus / Minus Query: 248 gatcagaagccgtcgtagaagccaccgaacgatatgttggcccttgtggacgcgcctgcc 307 ||||| ||||| || ||| ||||||| ||||||||||| ||||| || || | || | Sbjct: 94268 gatcaaaagccctcatagtagccaccaaacgatatgtttgccctagttgagccaccccct 94209 Query: 308 cccatcatagatgacatggcctggttcagcctcgatgtctgctgcaccacctgctgaatt 367 ||||||| ||||||||| |||||||||||||| |||||||||||||| |||||||| ||| Sbjct: 94208 cccatcacagatgacattgcctggttcagccttgatgtctgctgcacaacctgctgcatt 94149 Query: 368 ctct 371 |||| Sbjct: 94148 ctct 94145
>gb|AY022756.1| Oryza sativa microsatellite MRG5081 containing (CCT)X9, closest to marker R3113, genomic sequence Length = 227 Score = 93.7 bits (47), Expect = 7e-16 Identities = 62/67 (92%) Strand = Plus / Plus Query: 485 ccgaacgagcaaagcgccccgaccgcgttcacgcgcagcttccccacgctgaacaccacg 544 ||||||||||| |||||||||| | ||||||| |||||||||||||| |||||||||||| Sbjct: 19 ccgaacgagcacagcgccccgatcccgttcacccgcagcttccccaccctgaacaccacg 78 Query: 545 cactccg 551 ||||||| Sbjct: 79 cactccg 85
>gb|AC160016.2| Mus musculus BAC clone RP24-421D3 from chromosome 9, complete sequence Length = 186944 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 563 tcctcctccttcttgccctcttcctcctct 592 |||||||||||||| ||||||||||||||| Sbjct: 16430 tcctcctccttcttcccctcttcctcctct 16459
>emb|CT009708.6| Mouse DNA sequence from clone RP23-82F10 on chromosome 9, complete sequence Length = 247670 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 563 tcctcctccttcttgccctcttcctcctct 592 |||||||||||||| ||||||||||||||| Sbjct: 41922 tcctcctccttcttcccctcttcctcctct 41893
>gb|AC119202.6| Mus musculus chromosome 8, clone RP24-185N3, complete sequence Length = 159765 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 563 tcctcctccttcttgccctcttcctcctc 591 ||||||||||||||| ||||||||||||| Sbjct: 72522 tcctcctccttcttgtcctcttcctcctc 72494
>gb|AF049850.1|MMHC438N12 Mus musculus major histocompatibility locus class III region: complement C4 (C4) and cytochrome P450 hydroxylase A (CYP21OH-A) genes, complete cds; slp pseudogene, complete sequence; NG6, SKI, and complement factor B (Bf) genes, complete cds; and complement factor C2 (C2) gene, partial cds Length = 149886 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 565 ctcctccttcttgccctcttcctcctc 591 |||||||| |||||||||||||||||| Sbjct: 92778 ctcctcctccttgccctcttcctcctc 92752 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 563 tcctcctccttcttgccctcttcctcct 590 |||||||||| ||| ||||||||||||| Sbjct: 12904 tcctcctcctccttcccctcttcctcct 12877
>emb|AL773533.12| Mouse DNA sequence from clone RP23-159H12 on chromosome 2, complete sequence Length = 137804 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 561 cgtcctcctccttcttgccctcttcctcctc 591 |||||||||||| ||||||||| |||||||| Sbjct: 69000 cgtcctcctcctccttgccctcctcctcctc 69030
>emb|CT025759.14| Mouse DNA sequence from clone RP24-317H19 on chromosome 17, complete sequence Length = 171682 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 565 ctcctccttcttgccctcttcctcctc 591 |||||||| |||||||||||||||||| Sbjct: 46306 ctcctcctccttgccctcttcctcctc 46280
>emb|AL591127.12| Mouse DNA sequence from clone RP23-370H21 on chromosome 2, complete sequence Length = 125816 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 566 tcctccttcttgccctcttcctcctct 592 ||||||||||| ||||||||||||||| Sbjct: 38141 tcctccttctttccctcttcctcctct 38115
>gb|M64933.1|MUSSLPSEXB Mouse nonfunctional sex-limited protein, and cytochrome P-450 (Cyp21) genes, complete cds Length = 26307 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 565 ctcctccttcttgccctcttcctcctc 591 |||||||| |||||||||||||||||| Sbjct: 9123 ctcctcctccttgccctcttcctcctc 9149
>gb|AC118472.8| Mus musculus chromosome 19, clone RP23-187N14, complete sequence Length = 222869 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Minus Query: 563 tcctcctccttcttgccctcttcctcctct 592 ||||||||||||| | |||||||||||||| Sbjct: 29064 tcctcctccttctagtcctcttcctcctct 29035
>gb|AC147222.4| Mus musculus BAC clone RP23-69L20 from chromosome 6, complete sequence Length = 182525 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 562 gtcctcctccttcttgccctcttcctcctc 591 |||||||||||||||| |||| |||||||| Sbjct: 20822 gtcctcctccttcttgtcctcctcctcctc 20851
>ref|XM_875638.1| PREDICTED: Bos taurus similar to paired box gene 7, transcript variant 10 (LOC536229), mRNA Length = 1548 Score = 44.1 bits (22), Expect = 0.55 Identities = 31/34 (91%) Strand = Plus / Minus Query: 558 cgccgtcctcctccttcttgccctcttcctcctc 591 |||||||||||||||||||| || |||| ||||| Sbjct: 571 cgccgtcctcctccttcttgtccgcttcgtcctc 538
>ref|XM_875566.1| PREDICTED: Bos taurus similar to paired box gene 7, transcript variant 9 (LOC536229), mRNA Length = 1527 Score = 44.1 bits (22), Expect = 0.55 Identities = 31/34 (91%) Strand = Plus / Minus Query: 558 cgccgtcctcctccttcttgccctcttcctcctc 591 |||||||||||||||||||| || |||| ||||| Sbjct: 550 cgccgtcctcctccttcttgtccgcttcgtcctc 517
>ref|XM_616352.2| PREDICTED: Bos taurus similar to paired box gene 7, transcript variant 1 (LOC536229), mRNA Length = 1512 Score = 44.1 bits (22), Expect = 0.55 Identities = 31/34 (91%) Strand = Plus / Minus Query: 558 cgccgtcctcctccttcttgccctcttcctcctc 591 |||||||||||||||||||| || |||| ||||| Sbjct: 535 cgccgtcctcctccttcttgtccgcttcgtcctc 502
>ref|XM_875421.1| PREDICTED: Bos taurus similar to paired box gene 7, transcript variant 8 (LOC536229), mRNA Length = 1578 Score = 44.1 bits (22), Expect = 0.55 Identities = 31/34 (91%) Strand = Plus / Minus Query: 558 cgccgtcctcctccttcttgccctcttcctcctc 591 |||||||||||||||||||| || |||| ||||| Sbjct: 535 cgccgtcctcctccttcttgtccgcttcgtcctc 502
>ref|XM_875345.1| PREDICTED: Bos taurus similar to paired box gene 7, transcript variant 7 (LOC536229), mRNA Length = 1566 Score = 44.1 bits (22), Expect = 0.55 Identities = 31/34 (91%) Strand = Plus / Minus Query: 558 cgccgtcctcctccttcttgccctcttcctcctc 591 |||||||||||||||||||| || |||| ||||| Sbjct: 589 cgccgtcctcctccttcttgtccgcttcgtcctc 556
>ref|XM_875270.1| PREDICTED: Bos taurus similar to paired box gene 7, transcript variant 6 (LOC536229), mRNA Length = 1524 Score = 44.1 bits (22), Expect = 0.55 Identities = 31/34 (91%) Strand = Plus / Minus Query: 558 cgccgtcctcctccttcttgccctcttcctcctc 591 |||||||||||||||||||| || |||| ||||| Sbjct: 547 cgccgtcctcctccttcttgtccgcttcgtcctc 514
>ref|XM_875206.1| PREDICTED: Bos taurus similar to paired box gene 7, transcript variant 5 (LOC536229), mRNA Length = 1563 Score = 44.1 bits (22), Expect = 0.55 Identities = 31/34 (91%) Strand = Plus / Minus Query: 558 cgccgtcctcctccttcttgccctcttcctcctc 591 |||||||||||||||||||| || |||| ||||| Sbjct: 586 cgccgtcctcctccttcttgtccgcttcgtcctc 553
>ref|XM_875138.1| PREDICTED: Bos taurus similar to paired box gene 7, transcript variant 4 (LOC536229), mRNA Length = 1533 Score = 44.1 bits (22), Expect = 0.55 Identities = 31/34 (91%) Strand = Plus / Minus Query: 558 cgccgtcctcctccttcttgccctcttcctcctc 591 |||||||||||||||||||| || |||| ||||| Sbjct: 550 cgccgtcctcctccttcttgtccgcttcgtcctc 517
>ref|XM_875057.1| PREDICTED: Bos taurus similar to paired box gene 7, transcript variant 3 (LOC536229), mRNA Length = 1557 Score = 44.1 bits (22), Expect = 0.55 Identities = 31/34 (91%) Strand = Plus / Minus Query: 558 cgccgtcctcctccttcttgccctcttcctcctc 591 |||||||||||||||||||| || |||| ||||| Sbjct: 574 cgccgtcctcctccttcttgtccgcttcgtcctc 541
>gb|AC183432.1| Ornithorhynchus anatinus BAC clone OABb-35B8 from chromosome unknown, complete sequence Length = 142253 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 567 cctccttcttgccctcttcctc 588 |||||||||||||||||||||| Sbjct: 82327 cctccttcttgccctcttcctc 82348
>gb|AY914946.1| Schistosoma japonicum SJCHGC01384 protein mRNA, partial cds Length = 1406 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 81 gtgcattatgtacaaacacgac 102 |||||||||||||||||||||| Sbjct: 1345 gtgcattatgtacaaacacgac 1324
>gb|AY815775.1| Schistosoma japonicum SJCHGC04359 protein mRNA, complete cds Length = 878 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 81 gtgcattatgtacaaacacgac 102 |||||||||||||||||||||| Sbjct: 754 gtgcattatgtacaaacacgac 775
>gb|AY810143.1| Schistosoma japonicum SJCHGC01383 protein mRNA, partial cds Length = 942 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 81 gtgcattatgtacaaacacgac 102 |||||||||||||||||||||| Sbjct: 870 gtgcattatgtacaaacacgac 849
>gb|AC126547.4| Mus musculus BAC clone RP24-180F1 from chromosome 13, complete sequence Length = 181823 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 563 tcctcctccttcttgccctcttcctc 588 |||||||||||||| ||||||||||| Sbjct: 142452 tcctcctccttcttcccctcttcctc 142427
>ref|XM_544533.2| PREDICTED: Canis familiaris similar to paired box gene 7 isoform 2 (LOC487408), mRNA Length = 1860 Score = 44.1 bits (22), Expect = 0.55 Identities = 31/34 (91%) Strand = Plus / Minus Query: 558 cgccgtcctcctccttcttgccctcttcctcctc 591 |||||||||||||||||||| || |||| ||||| Sbjct: 928 cgccgtcctcctccttcttgtccgcttcgtcctc 895
>emb|AL445470.5| Human DNA sequence from clone RP11-421L10 on chromosome 1 Contains a novel gene, complete sequence Length = 86332 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 562 gtcctcctccttcttgccctcttcctcctc 591 ||||||||||||||| ||||||||||||| Sbjct: 1999 gtcctcctccttcttctcctcttcctcctc 2028
>gb|AC158934.4| Mus musculus chromosome 3, clone RP23-218L17, complete sequence Length = 194631 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 563 tcctcctccttcttgccctcttcctcctct 592 |||||||||||||| |||||||||||||| Sbjct: 128805 tcctcctccttcttttcctcttcctcctct 128834
>emb|AL645747.11| Mouse DNA sequence from clone RP23-436D9 on chromosome 11 Contains a novel gene and a signal transducing adaptor molecule (SH3 domain and ITAM motif) 1 (Stam) pseudogene, complete sequence Length = 172052 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Minus Query: 563 tcctcctccttcttgccctcttcctcctct 592 |||||||||| ||| ||||||||||||||| Sbjct: 115894 tcctcctcctccttcccctcttcctcctct 115865
>gb|AC092445.4| Homo sapiens BAC clone RP11-676H8 from 4, complete sequence Length = 173840 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 563 tcctcctccttcttgccctcttcctcctct 592 |||||||||||||| || |||||||||||| Sbjct: 166855 tcctcctccttcttcccttcttcctcctct 166884
>gb|AC010647.5| Homo sapiens chromosome 19 clone LLNLR-279F8, complete sequence Length = 40102 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 563 tcctcctccttcttgccctcttcctcctct 592 ||||||| |||||| ||||||||||||||| Sbjct: 26186 tcctccttcttcttcccctcttcctcctct 26215
>gb|AC008860.7| Homo sapiens chromosome 5 clone CTD-2185A1, complete sequence Length = 105885 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Minus Query: 563 tcctcctccttcttgccctcttcctcctct 592 |||||| |||||||| |||||||||||||| Sbjct: 100329 tcctcccccttcttggcctcttcctcctct 100300
>gb|AC157655.2| Mus musculus BAC clone RP23-462E18 from chromosome 8, complete sequence Length = 170167 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Minus Query: 563 tcctcctccttcttgccctcttcctcctct 592 ||||| ||||||||| |||||||||||||| Sbjct: 114376 tcctcttccttcttgtcctcttcctcctct 114347
>gb|AC122297.4| Mus musculus BAC clone RP23-266D1 from chromosome 6, complete sequence Length = 170005 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Minus Query: 562 gtcctcctccttcttgccctcttcctcctc 591 |||||||||||||||| |||| |||||||| Sbjct: 6509 gtcctcctccttcttgtcctcctcctcctc 6480
>gb|AC112204.2| Homo sapiens chromosome 5 clone RP11-79C6, complete sequence Length = 165304 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 563 tcctcctccttcttgccctcttcctcctct 592 |||||| |||||||| |||||||||||||| Sbjct: 90282 tcctcccccttcttggcctcttcctcctct 90311
>gb|AC102844.11| Mus musculus chromosome 3, clone RP24-389H4, complete sequence Length = 199088 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Minus Query: 563 tcctcctccttcttgccctcttcctcctct 592 |||||||||||||| |||||||||||||| Sbjct: 6280 tcctcctccttcttttcctcttcctcctct 6251
>gb|AC152941.2| Ornithorhynchus anatinus chromosome UNK clone OABb-24M14, complete sequence Length = 145914 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 563 tcctcctccttcttgccctcttcctcctct 592 |||||||||| |||| |||||||||||||| Sbjct: 38290 tcctcctcctccttgtcctcttcctcctct 38319
>emb|CT025675.12| Mouse DNA sequence from clone RP24-289M11 on chromosome 14, complete sequence Length = 147656 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 563 tcctcctccttcttgccctcttcctcctct 592 |||||||||| |||| |||||||||||||| Sbjct: 107836 tcctcctcctccttgtcctcttcctcctct 107865
>gb|AC118214.13| Mus musculus chromosome 5, clone RP24-334D6, complete sequence Length = 204792 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Minus Query: 562 gtcctcctccttcttgccctcttcctcctc 591 ||||||||||| ||||||||| |||||||| Sbjct: 75433 gtcctcctcctccttgccctcctcctcctc 75404
>gb|AC131231.10| Mus musculus chromosome 19, clone RP24-395L19, complete sequence Length = 181700 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Minus Query: 563 tcctcctccttcttgccctcttcctcctct 592 ||||||||||||| | |||||||||||||| Sbjct: 178237 tcctcctccttctagtcctcttcctcctct 178208
>gb|AC126801.5| Mus musculus BAC clone RP24-511J6 from 8, complete sequence Length = 157089 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Minus Query: 563 tcctcctccttcttgccctcttcctcctct 592 ||||| ||||||||| |||||||||||||| Sbjct: 60887 tcctcttccttcttgtcctcttcctcctct 60858
>gb|AC132393.4| Mus musculus BAC clone RP23-386K20 from 1, complete sequence Length = 220050 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Plus Query: 566 tcctccttcttgccctcttcctcctc 591 ||||||||||| |||||||||||||| Sbjct: 75059 tcctccttctttccctcttcctcctc 75084
>gb|AC164586.7| Mus musculus chromosome 8, clone RP24-258B3, complete sequence Length = 105452 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Minus Query: 562 gtcctcctccttcttgccctcttcctcctc 591 ||||||||||| ||||||||| |||||||| Sbjct: 92412 gtcctcctcctccttgccctcctcctcctc 92383
>gb|AC159998.6| Mus musculus BAC clone RP24-576J22 from chromosome 10, complete sequence Length = 166313 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 566 tcctccttcttgccctcttcctcct 590 ||||||||||| ||||||||||||| Sbjct: 164031 tcctccttctttccctcttcctcct 164055
>ref|XM_470024.1| Oryza sativa (japonica cultivar-group), mRNA Length = 912 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 347 tgctgcaccacctgctgaattctct 371 |||||||| |||||||||||||||| Sbjct: 674 tgctgcacaacctgctgaattctct 650
>gb|AC117643.15| Mus musculus chromosome 8, clone RP23-237I20, complete sequence Length = 186799 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 563 tcctcctccttcttgccctcttcctcctc 591 |||||||||| ||| |||||||||||||| Sbjct: 127121 tcctcctcctccttcccctcttcctcctc 127093
>gb|AC163489.5| Mus musculus chromosome 8, clone RP24-354I15, complete sequence Length = 157478 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 563 tcctcctccttcttgccctcttcctcctc 591 |||||||||| ||| |||||||||||||| Sbjct: 149333 tcctcctcctccttcccctcttcctcctc 149361
>gb|AC111030.11| Mus musculus chromosome 5, clone RP23-415E17, complete sequence Length = 229028 Score = 42.1 bits (21), Expect = 2.2 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Minus Query: 563 tcctcctccttcttgccctcttcctcctc 591 |||||||||||||| |||||||||||||| Sbjct: 95668 tcctcctccttctt-ccctcttcctcctc 95641
>gb|AC165240.6| Mus musculus chromosome 5, clone RP24-174P7, complete sequence Length = 196437 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 563 tcctcctccttcttgccctcttcctcctc 591 ||||||||||||| |||||||||||||| Sbjct: 12083 tcctcctccttctctccctcttcctcctc 12111
>gb|AC123048.4| Mus musculus BAC clone RP24-394D5 from chromosome 18, complete sequence Length = 148673 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 567 cctccttcttgccctcttcct 587 ||||||||||||||||||||| Sbjct: 2623 cctccttcttgccctcttcct 2603
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 347 tgctgcaccacctgctgaattctct 371 |||||||| |||||||||||||||| Sbjct: 33394235 tgctgcacaacctgctgaattctct 33394211
>gb|AC158614.5| Mus musculus 10 BAC RP23-76C5 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 223468 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 563 tcctcctccttcttgccctcttcctcctc 591 ||||||||||||| |||||||||||||| Sbjct: 111142 tcctcctccttctccccctcttcctcctc 111114
>gb|AC165346.4| Mus musculus BAC clone RP23-354N5 from chromosome 13, complete sequence Length = 233740 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 563 tcctcctccttcttgccctcttcctcctc 591 |||||||||||||| ||||||||||||| Sbjct: 7910 tcctcctccttcttctcctcttcctcctc 7882
>gb|AC137108.12| Mus musculus chromosome 9, clone RP23-277J20, complete sequence Length = 204108 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 563 tcctcctccttcttgccctcttcctcctc 591 |||||||||||||| ||||||||||||| Sbjct: 56877 tcctcctccttcttttcctcttcctcctc 56905
>gb|AC120558.12| Mus musculus chromosome 18, clone RP24-494K12, complete sequence Length = 216435 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 563 tcctcctccttcttgccctcttcctcctc 591 |||||||||||||| ||||| |||||||| Sbjct: 54738 tcctcctccttctttccctcctcctcctc 54710
>gb|AC129080.6| Mus musculus BAC clone RP24-226L20 from chromosome 5, complete sequence Length = 156781 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 563 tcctcctccttcttgccctcttcctcctc 591 |||||||| |||||| ||||||||||||| Sbjct: 41618 tcctcctctttcttgtcctcttcctcctc 41590
>gb|AC123848.4| Mus musculus BAC clone RP23-459I1 from chromosome 5, complete sequence Length = 184292 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 563 tcctcctccttcttgccctcttcctcctc 591 |||||||||||||| ||||||||||||| Sbjct: 153362 tcctcctccttcttctcctcttcctcctc 153334
>gb|AC131118.4| Mus musculus BAC clone RP24-386M5 from chromosome 19, complete sequence Length = 116409 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 563 tcctcctccttcttgccctcttcctcctc 591 |||||||||||||| ||||| |||||||| Sbjct: 62686 tcctcctccttcttcccctcctcctcctc 62658
>gb|AC132085.3| Mus musculus BAC clone RP24-550M24 from chromosome 13, complete sequence Length = 150362 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 563 tcctcctccttcttgccctcttcctcctc 591 |||||||||||||| ||||||||||||| Sbjct: 96536 tcctcctccttcttctcctcttcctcctc 96508
>gb|AC121595.3| Mus musculus BAC clone RP23-299A12 from chromosome X, complete sequence Length = 214297 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 160 acacatgagctagctttttct 180 ||||||||||||||||||||| Sbjct: 134211 acacatgagctagctttttct 134231
>gb|AC123795.4| Mus musculus BAC clone RP24-317K11 from chromosome 5, complete sequence Length = 188616 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 563 tcctcctccttcttgccctcttcctcctc 591 |||||||||||||| ||||||||||||| Sbjct: 22689 tcctcctccttcttctcctcttcctcctc 22661
>gb|AC114652.7| Mus musculus chromosome 18, clone RP24-156O17, complete sequence Length = 148737 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 567 cctccttcttgccctcttcct 587 ||||||||||||||||||||| Sbjct: 25771 cctccttcttgccctcttcct 25791
>gb|AC101659.12| Mus musculus chromosome 7, clone RP23-202M11, complete sequence Length = 244819 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 564 cctcctccttcttgccctcttcctc 588 ||||||||||||| ||||||||||| Sbjct: 102344 cctcctccttcttcccctcttcctc 102320
>gb|AC153656.4| Mus musculus BAC clone RP23-428O19 from chromosome 1, complete sequence Length = 196584 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 563 tcctcctccttcttgccctcttcctcctc 591 |||||||||||||| ||||||||||||| Sbjct: 59677 tcctcctccttcttctcctcttcctcctc 59649
>ref|XM_505473.1| Yarrowia lipolytica CLIB122, YALI0F15873g predicted mRNA Length = 1485 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 564 cctcctccttcttgccctcttcctc 588 |||||||||||||| |||||||||| Sbjct: 1378 cctcctccttcttggcctcttcctc 1354
>gb|AC158762.4| Mus musculus chromosome 1, clone RP24-255O19, complete sequence Length = 176468 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 563 tcctcctccttcttgccctcttcctcctc 591 |||||||||||||| ||||||||||||| Sbjct: 93223 tcctcctccttcttctcctcttcctcctc 93251
>ref|XM_782748.1| PREDICTED: Strongylocentrotus purpuratus similar to nuclear transcription factor, X-box binding 1 (LOC582810), mRNA Length = 3190 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 568 ctccttcttgccctcttcctcctct 592 |||| |||||||||||||||||||| Sbjct: 1227 ctccatcttgccctcttcctcctct 1203
>gb|AC122210.5| Mus musculus BAC clone RP23-96G7 from chromosome 10, complete sequence Length = 231988 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 566 tcctccttcttgccctcttcctcct 590 ||||||||||| ||||||||||||| Sbjct: 48465 tcctccttctttccctcttcctcct 48489
>gb|AC009785.8| Homo sapiens chromosome 7 clone RP11-198E23, complete sequence Length = 179145 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 562 gtcctcctccttcttgccctcttcctcct 590 |||||||||||||||| |||| ||||||| Sbjct: 114550 gtcctcctccttcttgtcctcctcctcct 114578
>gb|AC153852.9| Mus musculus 10 BAC RP23-136F8 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 222518 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 563 tcctcctccttcttgccctcttcctcctc 591 |||||||||||||| ||||||||||||| Sbjct: 77543 tcctcctccttcttctcctcttcctcctc 77515
>gb|AC005342.1| Homo sapiens 12p13.3 PAC RPCI5-1096D14 (Roswell Park Cancer Institute Human PAC Library) complete sequence Length = 220257 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 563 tcctcctccttcttgccctcttcctcctc 591 ||||||||||||| |||||||||||||| Sbjct: 54387 tcctcctccttctccccctcttcctcctc 54359
>gb|AC018612.7| Homo sapiens chromosome 8, clone RP11-34K13, complete sequence Length = 178525 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 569 tccttcttgccctcttcctcc 589 ||||||||||||||||||||| Sbjct: 178046 tccttcttgccctcttcctcc 178026
>gb|AC011853.7| Homo sapiens chromosome 8, clone RP11-403D15, complete sequence Length = 171541 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 569 tccttcttgccctcttcctcc 589 ||||||||||||||||||||| Sbjct: 85289 tccttcttgccctcttcctcc 85269
>gb|AC135958.2| Oryza sativa chromosome 3 BAC OSJNBa0059E14 genomic sequence, complete sequence Length = 154555 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 347 tgctgcaccacctgctgaattctct 371 |||||||| |||||||||||||||| Sbjct: 103876 tgctgcacaacctgctgaattctct 103900
>gb|AC153887.6| Mus musculus 10 BAC RP23-473N3 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 165306 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 563 tcctcctccttcttgccctcttcctcctc 591 |||||||||||||| ||||| |||||||| Sbjct: 85379 tcctcctccttcttcccctcctcctcctc 85351
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 347 tgctgcaccacctgctgaattctct 371 |||||||| |||||||||||||||| Sbjct: 33484745 tgctgcacaacctgctgaattctct 33484721
>gb|AC118019.11| Mus musculus chromosome 8, clone RP23-458N4, complete sequence Length = 185749 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 563 tcctcctccttcttgccctcttcctcctc 591 |||||||||||||| ||||||||||||| Sbjct: 59969 tcctcctccttcttctcctcttcctcctc 59941
>gb|AC020612.40| Homo sapiens 12 BAC RP11-133N21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 188928 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 565 ctcctccttcttgccctcttcctcc 589 ||||||||||||| ||||||||||| Sbjct: 134022 ctcctccttcttgtcctcttcctcc 134046
>gb|AY180177.1| Mus musculus KIS kinase (Kis) gene, exons 1 through 8 and complete cds Length = 100207 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 324 tggcctggttcagcctcgatg 344 ||||||||||||||||||||| Sbjct: 16270 tggcctggttcagcctcgatg 16290
>emb|AL672215.11| Mouse DNA sequence from clone RP23-162B19 on chromosome X, complete sequence Length = 196276 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 563 tcctcctccttcttgccctcttcctcctc 591 |||||||||||||| ||||||||||||| Sbjct: 8723 tcctcctccttcttctcctcttcctcctc 8695
>dbj|AK057909.1| Homo sapiens cDNA FLJ25180 fis, clone CBR09247 Length = 2289 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 563 tcctcctccttcttgccctcttcctcctc 591 ||||||||||||| |||||||||||||| Sbjct: 1441 tcctcctccttctccccctcttcctcctc 1469
>gb|AF193089.1|AF193089 Mus musculus clone VST18034U1 somatically acquired provirus flanking sequence and LTR Length = 656 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 564 cctcctccttcttgccctcttcctc 588 ||||||||||||| ||||||||||| Sbjct: 602 cctcctccttcttcccctcttcctc 626
>gb|AC155726.4| Mus musculus 6 BAC RP24-180C9 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 187560 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 563 tcctcctccttcttgccctcttcctcctc 591 ||||||||||||||| |||| |||||||| Sbjct: 74451 tcctcctccttcttgtcctcctcctcctc 74479
>dbj|AK070959.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023067J19, full insert sequence Length = 888 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 347 tgctgcaccacctgctgaattctct 371 |||||||| |||||||||||||||| Sbjct: 605 tgctgcacaacctgctgaattctct 581
>gb|AC126275.3| Mus musculus BAC clone RP23-111N17 from 14, complete sequence Length = 211542 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 563 tcctcctccttcttgccctcttcctcctc 591 ||||||||||||| |||||||||||||| Sbjct: 99435 tcctcctccttctccccctcttcctcctc 99407 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 563 tcctcctccttcttgccctcttcctcctc 591 ||||||||||||| |||||||||||||| Sbjct: 99321 tcctcctccttctccccctcttcctcctc 99293
>gb|AC110042.12| Mus musculus chromosome 1, clone RP23-278C6, complete sequence Length = 170602 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 563 tcctcctccttcttgccctcttcctcctc 591 |||||||||||||| ||||||||||||| Sbjct: 142526 tcctcctccttcttctcctcttcctcctc 142554
>dbj|AP006289.2| Homo sapiens genomic DNA, chromosome 11 clone:RP11-466C23, complete sequence Length = 166042 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 563 tcctcctccttcttgccctcttcct 587 |||||||||||||||||||| |||| Sbjct: 50393 tcctcctccttcttgccctcctcct 50369
>gb|AC114624.24| Mus musculus chromosome 5, clone RP24-106K21, complete sequence Length = 197077 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 563 tcctcctccttcttgccctcttcctcctc 591 ||||||||||||| |||||||||||||| Sbjct: 118192 tcctcctccttctctccctcttcctcctc 118164
>gb|AC110730.10| Mus musculus chromosome 18, clone RP23-315I21, complete sequence Length = 223107 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 563 tcctcctccttcttgccctcttcctcctc 591 |||||||||||||| ||||| |||||||| Sbjct: 65807 tcctcctccttctttccctcctcctcctc 65835
>gb|AC118202.8| Mus musculus chromosome 10, clone RP23-378J3, complete sequence Length = 213862 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 563 tcctcctccttcttgccctcttcctcctc 591 |||||||||||||| ||||||||||||| Sbjct: 2548 tcctcctccttcttctcctcttcctcctc 2520
>gb|AC147556.3| Mus musculus BAC clone RP23-480N14 from 1, complete sequence Length = 175641 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 563 tcctcctccttcttgccctcttcctcctc 591 |||||||||||||| ||||||||||||| Sbjct: 108 tcctcctccttcttctcctcttcctcctc 80
>gb|AC132224.3| Mus musculus BAC clone RP24-554P12 from 1, complete sequence Length = 154996 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 563 tcctcctccttcttgccctcttcctcctc 591 |||||||||||||| ||||||||||||| Sbjct: 22135 tcctcctccttcttctcctcttcctcctc 22163
>gb|AC139382.3| Mus musculus BAC clone RP23-30B24 from 12, complete sequence Length = 180698 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 566 tcctccttcttgccctcttcctcct 590 ||||||| ||||||||||||||||| Sbjct: 114696 tcctcctccttgccctcttcctcct 114672
>gb|AC145559.4| Mus musculus BAC clone RP23-371A1 from 5, complete sequence Length = 203726 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 563 tcctcctccttcttgccctcttcctcctc 591 |||||||| |||||| ||||||||||||| Sbjct: 194516 tcctcctctttcttgtcctcttcctcctc 194488
>emb|BX005240.7| Mouse DNA sequence from clone RP23-185M16 on chromosome X, complete sequence Length = 197310 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 160 acacatgagctagctttttct 180 ||||||||||||||||||||| Sbjct: 194464 acacatgagctagctttttct 194444
>emb|AL627228.31| Mouse DNA sequence from clone RP23-137L22 on chromosome 4, complete sequence Length = 193813 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 563 tcctcctccttcttgccctcttcctcctc 591 |||||||||||||| ||||||||||||| Sbjct: 30288 tcctcctccttcttctcctcttcctcctc 30260
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 564 cctcctccttcttgccctcttcctc 588 |||||||||||||| |||||||||| Sbjct: 2139642 cctcctccttcttggcctcttcctc 2139666
>dbj|AP000633.4| Homo sapiens genomic DNA, chromosome 11 clone:CMB9-7G15, complete sequence Length = 110892 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 563 tcctcctccttcttgccctcttcct 587 |||||||||||||||||||| |||| Sbjct: 57867 tcctcctccttcttgccctcctcct 57843
>gb|AC162449.4| Mus musculus chromosome 1, clone RP23-424E19, complete sequence Length = 184609 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 563 tcctcctccttcttgccctcttcctcctc 591 |||||||||||||| ||||||||||||| Sbjct: 172378 tcctcctccttcttctcctcttcctcctc 172350
>emb|AL626774.23| Mouse DNA sequence from clone RP23-198O15 on chromosome 4, complete sequence Length = 181545 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 563 tcctcctccttcttgccctcttcctcctc 591 |||||||||||||| |||| ||||||||| Sbjct: 173828 tcctcctccttcttccccttttcctcctc 173800
>emb|AL603826.18| Mouse DNA sequence from clone RP23-206P11 on chromosome 11, complete sequence Length = 145299 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 563 tcctcctccttcttgccctcttcctcctc 591 |||||||||| ||||||||||||||||| Sbjct: 99522 tcctcctcctctttgccctcttcctcctc 99550
>gb|AC105976.13| Mus musculus chromosome 5, clone RP24-315H14, complete sequence Length = 188130 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 564 cctcctccttcttgccctcttcctcctc 591 |||||||||||| |||||||||||||| Sbjct: 105487 cctcctccttctctccctcttcctcctc 105460
>gb|AC166776.6| Mus musculus chromosome 5, clone RP23-24K16, complete sequence Length = 216652 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 564 cctcctccttcttgccctcttcctcctc 591 ||||||||| || ||||||||||||||| Sbjct: 9066 cctcctcctcctcgccctcttcctcctc 9093
>ref|NM_194414.1| Danio rerio matrix metalloproteinase 14 (membrane-inserted) beta (mmp14b), mRNA Length = 4342 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 565 ctcctccttcttgccctcttcctc 588 ||||||||| |||||||||||||| Sbjct: 2059 ctcctcctttttgccctcttcctc 2036
>gb|AC120539.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0063D09 map S1559, complete sequence Length = 190721 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 547 ctccggcggcgcgccgtcctcctccttc 574 |||||||| | ||||||||||||||||| Sbjct: 60400 ctccggcgtcccgccgtcctcctccttc 60427
>gb|AC116781.9| Mus musculus chromosome 16, clone RP24-134G20, complete sequence Length = 166568 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 563 tcctcctccttcttgccctcttcctcct 590 |||||||||| ||| ||||||||||||| Sbjct: 131003 tcctcctcctcctttccctcttcctcct 130976
>gb|AC161050.2| Mus musculus BAC clone RP23-477C12 from chromosome 12, complete sequence Length = 197084 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 563 tcctcctccttcttgccctcttcctcct 590 |||||||||||||| ||||| ||||||| Sbjct: 156259 tcctcctccttctttccctcctcctcct 156286
>ref|NM_001003870.1| Danio rerio zgc:110448 (zgc:110448), mRNA Length = 3322 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 569 tccttcttgccctcttcctcctct 592 ||||||||||||||| |||||||| Sbjct: 1080 tccttcttgccctctccctcctct 1057
>gb|AC137978.8| Mus musculus chromosome 1, clone RP24-468M12, complete sequence Length = 181633 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 563 tcctcctccttcttgccctcttcctcct 590 |||||||||| || |||||||||||||| Sbjct: 149631 tcctcctcctcctcgccctcttcctcct 149658
>gb|AY648792.1| Danio rerio myosin-binding subunit of myosin phosphatase mRNA, complete cds Length = 3322 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 569 tccttcttgccctcttcctcctct 592 ||||||||||||||| |||||||| Sbjct: 1080 tccttcttgccctctccctcctct 1057
>gb|U12386.1|ACU12386 Acanthamoeba castellanii mitochondrion, complete genome Length = 41591 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 146 gctgatttgctataacacat 165 |||||||||||||||||||| Sbjct: 2631 gctgatttgctataacacat 2612
>ref|XM_364430.1| Magnaporthe grisea 70-15 hypothetical protein (MG09275.4) partial mRNA Length = 4653 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 564 cctcctccttcttgccctcttcctcctc 591 |||||| ||||||| ||||||||||||| Sbjct: 2950 cctccttcttcttggcctcttcctcctc 2923
>ref|XM_873506.1| PREDICTED: Bos taurus similar to cerebral cavernous malformation 2 isoform 2, transcript variant 3 (LOC506450), mRNA Length = 983 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 570 ccttcttgccctcttcctcc 589 |||||||||||||||||||| Sbjct: 106 ccttcttgccctcttcctcc 87
>ref|XM_873401.1| PREDICTED: Bos taurus similar to cerebral cavernous malformation 2 isoform 2, transcript variant 2 (LOC506450), mRNA Length = 2484 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 570 ccttcttgccctcttcctcc 589 |||||||||||||||||||| Sbjct: 106 ccttcttgccctcttcctcc 87
>gb|AC147160.2| Mus musculus BAC clone RP24-336A22 from chromosome 15, complete sequence Length = 205374 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 564 cctcctccttcttgccctcttcctcctc 591 ||||||||| ||| |||||||||||||| Sbjct: 94649 cctcctcctccttcccctcttcctcctc 94622
>gb|AC135240.2| Mus musculus BAC clone RP24-63O24 from chromosome 5, complete sequence Length = 196371 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 568 ctccttcttgccctcttcctcctc 591 ||||||||| |||||||||||||| Sbjct: 26630 ctccttcttcccctcttcctcctc 26653
>gb|AC140420.4| Mus musculus BAC clone RP24-440F22 from chromosome 5, complete sequence Length = 157377 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 568 ctccttcttgccctcttcctcctc 591 ||||||||| |||||||||||||| Sbjct: 44909 ctccttcttcccctcttcctcctc 44886
>gb|AC147234.3| Mus musculus BAC clone RP24-500F11 from chromosome 18, complete sequence Length = 189846 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 564 cctcctccttcttgccctcttcctcctc 591 ||||||||||||| ||||||||||||| Sbjct: 18857 cctcctccttcttctcctcttcctcctc 18830
>gb|AC157903.3| Mus musculus chromosome 18, clone RP23-341E18, complete sequence Length = 198984 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 564 cctcctccttcttgccctcttcctcctc 591 |||||||||||| |||||||||||||| Sbjct: 74168 cctcctccttctctccctcttcctcctc 74141
>gb|AC099934.14| Mus musculus chromosome 12, clone RP23-17K9, complete sequence Length = 234795 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 564 cctcctccttcttgccctcttcctcctc 591 ||||||||||| | |||||||||||||| Sbjct: 147776 cctcctccttcctcccctcttcctcctc 147749
>gb|AC133607.3| Mus musculus BAC clone RP23-153N7 from chromosome 18, complete sequence Length = 223708 Score = 40.1 bits (20), Expect = 8.5 Identities = 29/31 (93%), Gaps = 2/31 (6%) Strand = Plus / Plus Query: 562 gtcctcctccttcttgccctcttcctcctct 592 ||||||||||||||| |||||||||||||| Sbjct: 64476 gtcctcctccttctt--cctcttcctcctct 64504
>gb|AC122211.4| Mus musculus BAC clone RP23-97F18 from chromosome 18, complete sequence Length = 186451 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 564 cctcctccttcttgccctcttcctcctc 591 ||||||||||||| ||||||||||||| Sbjct: 98600 cctcctccttcttctcctcttcctcctc 98627
>ref|XM_811045.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053506999.120) partial mRNA Length = 1509 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 563 tcctcctccttcttgccctcttcctcct 590 |||||||||||||| |||| |||||||| Sbjct: 731 tcctcctccttctttccctgttcctcct 704
>ref|XM_650793.1| Entamoeba histolytica HM-1:IMSS epsilon-adaptin (21.t00044) partial mRNA Length = 2304 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 tttcttcatcagatgtacgt 195 |||||||||||||||||||| Sbjct: 169 tttcttcatcagatgtacgt 150
>gb|AC138174.9| Mus musculus, clone RP24-198I22, complete sequence Length = 177516 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 573 tcttgccctcttcctcctct 592 |||||||||||||||||||| Sbjct: 72746 tcttgccctcttcctcctct 72765 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 573 tcttgccctcttcctcctct 592 |||||||||||||||||||| Sbjct: 72631 tcttgccctcttcctcctct 72650
>gb|AC112406.5| Rattus norvegicus 11 BAC CH230-329D3 (Children's Hospital Oakland Research Institute) complete sequence Length = 182245 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 atgacaaccactaccaaggc 144 |||||||||||||||||||| Sbjct: 153683 atgacaaccactaccaaggc 153664
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 553 cggcgcgccgtcctcctccttctt 576 |||||||| ||||||||||||||| Sbjct: 2079908 cggcgcgctgtcctcctccttctt 2079931
>emb|AL109654.22|HSG278N14 Human DNA sequence from clone GS1-278N14 on chromosome Xq27.3-28, complete sequence Length = 182150 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 573 tcttgccctcttcctcctct 592 |||||||||||||||||||| Sbjct: 181899 tcttgccctcttcctcctct 181918
>gb|AC157794.3| Mus musculus chromosome 1, clone RP24-111L14, complete sequence Length = 157029 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 563 tcctcctccttcttgccctcttcctcct 590 |||||||||| || |||||||||||||| Sbjct: 40574 tcctcctcctcctcgccctcttcctcct 40547
>gb|AY324197.1| Danio rerio membrane-type matrix metalloproteinase 1 beta mRNA, complete cds Length = 4342 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 565 ctcctccttcttgccctcttcctc 588 ||||||||| |||||||||||||| Sbjct: 2059 ctcctcctttttgccctcttcctc 2036
>gb|AC111460.6| Rattus norvegicus BAC CH230-211F21 (Children's Hospital Oakland Research Institute) complete sequence Length = 218573 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 563 tcctcctccttcttgccctc 582 |||||||||||||||||||| Sbjct: 70642 tcctcctccttcttgccctc 70623
>emb|BX640448.1| Bordetella bronchiseptica strain RB50, complete genome; segment 12/16 Length = 347137 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 553 cggcgcgccgtcctcctcct 572 |||||||||||||||||||| Sbjct: 13390 cggcgcgccgtcctcctcct 13371
>gb|AC158566.8| Mus musculus chromosome 8, clone RP24-149I12, complete sequence Length = 156342 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 568 ctccttcttgccctcttcctcctc 591 ||||||||| |||||||||||||| Sbjct: 50377 ctccttctttccctcttcctcctc 50354
>emb|AL596444.10| Mouse DNA sequence from clone RP23-354D12 on chromosome 11 Contains the gene for reversion induced LIM protein (Ril), the Slc22a4 and Slc22a9 genes for solute carrier family 22 (organic cation transporter), members 4 and 9, a Sin3-associated polypeptide 18 (Sap18) pseudogene, a pseudogene similar to part of solute carrier family 22 (organic cation transporter), member 4 Slc22a4 and two CpG islands, complete sequence Length = 171301 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 347 tgctgcaccacctgctgaat 366 |||||||||||||||||||| Sbjct: 102310 tgctgcaccacctgctgaat 102329
>emb|AL669968.10| Mouse DNA sequence from clone RP23-475F22 on chromosome 11 Contains a glyceraldehyde-3-phosphate dehydrogenase (Gapd) pseudogene, complete sequence Length = 167170 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 563 tcctcctccttcttgccctcttcctcct 590 ||||||||||||| ||||||||||||| Sbjct: 87479 tcctcctccttctccccctcttcctcct 87506
>gb|AC123784.2| Homo sapiens chromosome 15, clone RP11-354M13, complete sequence Length = 175493 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 563 tcctcctccttcttgccctcttcctcct 590 |||||||||||||| |||||||||||| Sbjct: 77578 tcctcctccttcttctcctcttcctcct 77551
>gb|AC084388.1| Mus musculus clone RP23-132G6, complete sequence Length = 208754 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 564 cctcctccttcttgccctcttcctcctc 591 ||||||||| ||| |||||||||||||| Sbjct: 19201 cctcctcctccttcccctcttcctcctc 19174
>gb|AC091928.3| Homo sapiens chromosome 5 clone RP11-292F10, complete sequence Length = 200923 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 562 gtcctcctccttcttgccctcttc 585 |||||||||||||| ||||||||| Sbjct: 69843 gtcctcctccttctagccctcttc 69866
>ref|XM_704312.1| PREDICTED: Danio rerio similar to membrane-type matrix metalloproteinase 1 beta, transcript variant 5 (LOC566945), mRNA Length = 3601 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 565 ctcctccttcttgccctcttcctc 588 ||||||||| |||||||||||||| Sbjct: 2101 ctcctcctttttgccctcttcctc 2078
>ref|XM_704311.1| PREDICTED: Danio rerio similar to membrane-type matrix metalloproteinase 1 beta, transcript variant 4 (LOC566945), mRNA Length = 3628 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 565 ctcctccttcttgccctcttcctc 588 ||||||||| |||||||||||||| Sbjct: 2128 ctcctcctttttgccctcttcctc 2105
>ref|XM_685135.1| PREDICTED: Danio rerio similar to membrane-type matrix metalloproteinase 1 beta, transcript variant 1 (LOC566945), mRNA Length = 4460 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 565 ctcctccttcttgccctcttcctc 588 ||||||||| |||||||||||||| Sbjct: 2053 ctcctcctttttgccctcttcctc 2030
>gb|AC136191.5| Rattus norvegicus BAC CH230-52I17 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 221923 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 562 gtcctcctccttcttgccctcttcctcc 589 ||||||||||||||||| |||| ||||| Sbjct: 128398 gtcctcctccttcttgctctctccctcc 128425
>gb|AC159622.2| Mus musculus BAC clone RP24-289D12 from chromosome 12, complete sequence Length = 174662 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 563 tcctcctccttcttgccctcttcctcct 590 |||||||||||||| ||||| ||||||| Sbjct: 123492 tcctcctccttctttccctcctcctcct 123465
>gb|AC154141.7| Mus musculus chromosome 7, clone RP24-343G19, complete sequence Length = 178391 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 568 ctccttcttgccctcttcctcctc 591 ||||| |||||||||||||||||| Sbjct: 90020 ctcctccttgccctcttcctcctc 90043
>gb|AC133897.15| Mus musculus chromosome 5, clone RP24-357G2, complete sequence Length = 177013 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 564 cctcctccttcttgccctcttcctcctc 591 ||||||||| || ||||||||||||||| Sbjct: 23813 cctcctcctcctcgccctcttcctcctc 23786
>gb|AC069476.25| Homo sapiens chromosome 11 clone b430h11 map 11, complete sequence Length = 184824 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 563 tcctcctccttcttgccctcttcctcct 590 ||||| |||||||| ||||||||||||| Sbjct: 168890 tcctcttccttcttcccctcttcctcct 168917
>dbj|AK031417.1| Mus musculus 13 days embryo male testis cDNA, RIKEN full-length enriched library, clone:6030426J21 product:KIAA1199 PROTEIN (FRAGMENT) homolog [Homo sapiens], full insert sequence Length = 3732 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 568 ctccttcttgccctcttcctcctc 591 ||||| |||||||||||||||||| Sbjct: 1962 ctcctccttgccctcttcctcctc 1985
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 547 ctccggcggcgcgccgtcctcctccttc 574 |||||||| | ||||||||||||||||| Sbjct: 3692728 ctccggcgtcccgccgtcctcctccttc 3692755
>emb|BX465202.4| Zebrafish DNA sequence from clone CH211-191G24 in linkage group 2, complete sequence Length = 170771 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 565 ctcctccttcttgccctcttcctc 588 ||||||||| |||||||||||||| Sbjct: 68916 ctcctcctttttgccctcttcctc 68939
>gb|AC102162.6| Mus musculus chromosome 18, clone RP23-419P4, complete sequence Length = 194165 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 564 cctcctccttcttgccctcttcctcctc 591 |||||||||||| |||||||||||||| Sbjct: 112364 cctcctccttctctccctcttcctcctc 112391
>emb|AL929407.16| Mouse DNA sequence from clone RP23-99C16 on chromosome 2, complete sequence Length = 144566 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 557 gcgccgtcctcctccttctt 576 |||||||||||||||||||| Sbjct: 39947 gcgccgtcctcctccttctt 39966
>emb|AL954150.15| Zebrafish DNA sequence from clone CH211-214B16 in linkage group 3, complete sequence Length = 209296 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 569 tccttcttgccctcttcctc 588 |||||||||||||||||||| Sbjct: 18759 tccttcttgccctcttcctc 18778
>emb|AL928674.5| Zebrafish DNA sequence from clone CH211-10E2, complete sequence Length = 205118 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 565 ctcctccttcttgccctcttcctc 588 ||||||||| |||||||||||||| Sbjct: 104397 ctcctcctttttgccctcttcctc 104420
>gb|AC154341.2| Mus musculus BAC clone RP23-240C2 from 16, complete sequence Length = 163871 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 563 tcctcctccttcttgccctcttcctcct 590 ||||||||||||||| |||| ||||||| Sbjct: 116568 tcctcctccttcttgtcctcctcctcct 116595
>gb|M17440.1|MUSMHC4H2S Mus musculus complement component C4A (C4A) gene, complete cds Length = 17522 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 563 tcctcctccttcttgccctcttcctcct 590 |||||||||| ||| ||||||||||||| Sbjct: 6934 tcctcctcctccttcccctcttcctcct 6961
>emb|CT574570.2| Pan troglodytes chromosome X clone CH251-19I14 map Xq28, complete sequence Length = 173906 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 573 tcttgccctcttcctcctct 592 |||||||||||||||||||| Sbjct: 35938 tcttgccctcttcctcctct 35957
>gb|AC115783.11| Mus musculus chromosome 18, clone RP23-168P8, complete sequence Length = 187870 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 563 tcctcctccttcttgccctcttcctcct 590 |||||||||||||| | ||||||||||| Sbjct: 86956 tcctcctccttcttcctctcttcctcct 86929
>gb|AC156624.1| Ornithorhynchus anatinus clone OA_Bb-193E18, complete sequence Length = 162554 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 564 cctcctccttcttgccctcttcct 587 |||||||||||||| ||||||||| Sbjct: 18078 cctcctccttcttgtcctcttcct 18055
>emb|BX293563.9| Mouse DNA sequence from clone RP23-379K6 on chromosome 4, complete sequence Length = 104349 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 573 tcttgccctcttcctcctct 592 |||||||||||||||||||| Sbjct: 19696 tcttgccctcttcctcctct 19677
>gb|AC003024.1|AC003024 Human Chromosome 15q26.1 PAC clone pDJ416i6, complete sequence Length = 116917 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 563 tcctcctccttcttgccctcttcctcct 590 |||||||||||||| |||||||||||| Sbjct: 114418 tcctcctccttcttctcctcttcctcct 114391
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 547 ctccggcggcgcgccgtcctcctccttc 574 |||||||| | ||||||||||||||||| Sbjct: 3701422 ctccggcgtcccgccgtcctcctccttc 3701449
>emb|CT033762.9| Mouse DNA sequence from clone RP24-144L17 on chromosome 14, complete sequence Length = 114799 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 573 tcttgccctcttcctcctct 592 |||||||||||||||||||| Sbjct: 27979 tcttgccctcttcctcctct 27998
>emb|CT573030.2| Mouse DNA sequence from clone RP24-100B3 on chromosome 17, complete sequence Length = 111957 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 563 tcctcctccttcttgccctcttcctcct 590 |||||||||| ||| ||||||||||||| Sbjct: 76383 tcctcctcctccttcccctcttcctcct 76356
>gb|AC002426.1|AC002426 Human Chromosome 15q26 pac pDJ422e7, complete sequence Length = 117852 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 563 tcctcctccttcttgccctcttcctcct 590 |||||||||||||| |||||||||||| Sbjct: 9659 tcctcctccttcttctcctcttcctcct 9632
>emb|AL672244.15| Mouse DNA sequence from clone RP23-43I8 on chromosome 16, complete sequence Length = 243114 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 563 tcctcctccttcttgccctcttcctcct 590 |||||||||| ||| ||||||||||||| Sbjct: 175843 tcctcctcctcctttccctcttcctcct 175870
>emb|AL928634.8| Mouse DNA sequence from clone RP23-363G7 on chromosome 4, complete sequence Length = 156427 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 563 tcctcctccttcttgccctcttcctcct 590 |||||||||||||| ||||| ||||||| Sbjct: 79283 tcctcctccttcttcccctcctcctcct 79310
>gb|AC121107.19| Mus musculus chromosome 1, clone RP24-240P15, complete sequence Length = 155435 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 565 ctcctccttcttgccctcttcctcctct 592 ||||||||||| ||||||||||||||| Sbjct: 103584 ctcctccttctctccctcttcctcctct 103611
>gb|U03732.1|ACU03732 Acanthamoeba castellanii Neff mitochondrion rRNA large subunit gene Length = 7778 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 146 gctgatttgctataacacat 165 |||||||||||||||||||| Sbjct: 3057 gctgatttgctataacacat 3038
>emb|AL645530.11| Mouse DNA sequence from clone RP23-92N10 on chromosome 11, complete sequence Length = 91481 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 563 tcctcctccttcttgccctcttcctcct 590 |||||||||||||| |||||||||||| Sbjct: 37860 tcctcctccttcttttcctcttcctcct 37887 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,457,267 Number of Sequences: 3902068 Number of extensions: 4457267 Number of successful extensions: 122251 Number of sequences better than 10.0: 172 Number of HSP's better than 10.0 without gapping: 170 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 121355 Number of HSP's gapped (non-prelim): 898 length of query: 625 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 602 effective length of database: 17,143,297,704 effective search space: 10320265217808 effective search space used: 10320265217808 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
