>gb|AC153626.5| Mus musculus 6 BAC RP23-245J24 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 190365

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 82    acatcaacttccagatgaacaaaatg 107
             |||||||||||||||||||| |||||
Sbjct: 93861 acatcaacttccagatgaactaaatg 93836

>gb|AC012560.5| Homo sapiens chromosome 10 clone RP11-397I15, complete sequence
          Length = 170917

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 80     taacatcaacttccagatgaa 100
              |||||||||||||||||||||
Sbjct: 169390 taacatcaacttccagatgaa 169370

>ref|NM_165878.1| Drosophila melanogaster CG30046-RB (CG30046), mRNA
          Length = 2642

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 432  ctcccatgaaacccatggcca 452
            |||||||||||||||||||||
Sbjct: 1226 ctcccatgaaacccatggcca 1246

>gb|AC010163.8| Homo sapiens chromosome 10 clone RP11-90J7, complete sequence
          Length = 157069

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 80     taacatcaacttccagatgaa 100
              |||||||||||||||||||||
Sbjct: 106123 taacatcaacttccagatgaa 106143

>gb|AY070714.1| Drosophila melanogaster SD07907 full length cDNA
          Length = 2861

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 432  ctcccatgaaacccatggcca 452
            |||||||||||||||||||||
Sbjct: 1249 ctcccatgaaacccatggcca 1269

>gb|AC021233.9| Homo sapiens chromosome 11, clone RP11-215H22, complete sequence
          Length = 159641

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 42    aaatattatgaaaaagcccaa 62
             |||||||||||||||||||||
Sbjct: 65741 aaatattatgaaaaagcccaa 65721

>gb|AC007476.5|AC007476 Drosophila melanogaster, chromosome 2R, region 49A-49B, BAC clone
            BACR37P06, complete sequence
          Length = 171705

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 432  ctcccatgaaacccatggcca 452
            |||||||||||||||||||||
Sbjct: 4067 ctcccatgaaacccatggcca 4087

>gb|AC007440.6|AC007440 Drosophila melanogaster, chromosome 2R, region 49A-49B, BAC clone
              BACR37I09, complete sequence
          Length = 184621

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 432    ctcccatgaaacccatggcca 452
              |||||||||||||||||||||
Sbjct: 158702 ctcccatgaaacccatggcca 158722

>emb|BX822540.1|CNS0A70Q Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB47ZE02 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1797

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 190 atcgggagaagaagaagaggt 210
           |||||||||||||||||||||
Sbjct: 113 atcgggagaagaagaagaggt 93

>gb|AE003822.3| Drosophila melanogaster chromosome 2R, section 28 of 73 of the complete
             sequence
          Length = 233148

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 432   ctcccatgaaacccatggcca 452
             |||||||||||||||||||||
Sbjct: 27193 ctcccatgaaacccatggcca 27213

>ref|XM_476285.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2406

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 196 agaagaagaagaggttgttg 215
           ||||||||||||||||||||
Sbjct: 159 agaagaagaagaggttgttg 178

>gb|AE014840.1| Plasmodium falciparum 3D7 chromosome 11 section 5 of 8 of the complete
              sequence
          Length = 249995

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 37     gtacaaaatattatgaaaaa 56
              ||||||||||||||||||||
Sbjct: 215356 gtacaaaatattatgaaaaa 215375

>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 87      aacttccagatgaacaaaat 106
               ||||||||||||||||||||
Sbjct: 3319217 aacttccagatgaacaaaat 3319236

>gb|AY647955.1| Arabidopsis lyrata subsp. petraea AT4G28750 gene, partial cds
          Length = 756

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 112 aaccatgttatgaacaaaag 131
           ||||||||||||||||||||
Sbjct: 390 aaccatgttatgaacaaaag 371

>gb|AC116412.19| Mus musculus chromosome 5, clone RP24-82A20, complete sequence
          Length = 191823

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 524   ggagaggaaccagtgggttt 543
             ||||||||||||||||||||
Sbjct: 25286 ggagaggaaccagtgggttt 25305

>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence
          Length = 6365727

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 423    gccaaacacctcccatgaaaccca 446
              |||||||||||||||| |||||||
Sbjct: 311840 gccaaacacctcccatcaaaccca 311863

>gb|AC137749.11| Mus musculus chromosome 6, clone RP23-69C16, complete sequence
          Length = 293695

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 193   gggagaagaagaagaggttg 212
             ||||||||||||||||||||
Sbjct: 77043 gggagaagaagaagaggttg 77062

>gb|AC122723.6| Medicago truncatula clone mth2-5i15, complete sequence
          Length = 105353

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 253   gtcgatgatggtggtggcga 272
             ||||||||||||||||||||
Sbjct: 35755 gtcgatgatggtggtggcga 35736

>emb|AL133330.14| Human DNA sequence from clone RP1-68D18 on chromosome 11p12-13 Contains
             part of the SLC1A2 gene for three variants of solute
             carrier family 1 (glial high affinity glutamate
             transporter) member 2 and part of the CD44 gene for CD44
             antigen (homing function and Indian blood group system)
             with five variants, complete sequence
          Length = 183682

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 113   accatgttatgaacaaaagc 132
             ||||||||||||||||||||
Sbjct: 82387 accatgttatgaacaaaagc 82368

>emb|AL162408.8| Human DNA sequence from clone RP11-397O4 on chromosome 10 Contains
           a novel gene, the 5' end of a novel gene and a CpG
           island, complete sequence
          Length = 28205

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 421 cagccaaacacctcccatga 440
           ||||||||||||||||||||
Sbjct: 202 cagccaaacacctcccatga 221

>emb|AL139243.11| Human DNA sequence from clone RP11-439D8 on chromosome 10 Contains a
             novel gene, the HPS1 gene for Hermansky-Pudlak syndrome 1,
             the 3' end of the HPSE2 gene for heparanase 2 and a CpG
             island, complete sequence
          Length = 143463

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 86    caacttccagatgaacaaaa 105
             ||||||||||||||||||||
Sbjct: 98982 caacttccagatgaacaaaa 99001

>emb|AL136369.7| Human DNA sequence from clone RP1-251M9 on chromosome 10 Contains three
              novel genes, complete sequence
          Length = 110952

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 421    cagccaaacacctcccatga 440
              ||||||||||||||||||||
Sbjct: 109125 cagccaaacacctcccatga 109144

>emb|AL031965.8|HS355N11 Human DNA sequence from clone RP3-355N11 on chromosome 1q24.1-24.3
             Contains the 5' end of a novel gene (FLJ23550), complete
             sequence
          Length = 78336

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 481   aaatatgctccatgaacaaa 500
             ||||||||||||||||||||
Sbjct: 21591 aaatatgctccatgaacaaa 21572

>emb|AL034491.1|SPCC1620 S.pombe chromosome III cosmid c1620
          Length = 30198

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 189   catcgggagaagaagaagag 208
             ||||||||||||||||||||
Sbjct: 12664 catcgggagaagaagaagag 12683

>emb|AL928592.13| Mouse DNA sequence from clone RP24-168J7 on chromosome 4 Contains a
             novel pseudogene and a novel gene, complete sequence
          Length = 126611

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 523   gggagaggaaccagtgggtt 542
             ||||||||||||||||||||
Sbjct: 54889 gggagaggaaccagtgggtt 54870

>gb|AC116316.4| Homo sapiens BAC clone RP11-1258N14 from 4, complete sequence
          Length = 130364

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 250   gatgtcgatgatggtggtgg 269
             ||||||||||||||||||||
Sbjct: 14332 gatgtcgatgatggtggtgg 14351

>gb|AF314199.1|AF314199S1 Homo sapiens neuroplastoma apoptosis-related RNA-binding protein
             (CUGBP2) gene, exons 1a and 1b
          Length = 59000

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 421   cagccaaacacctcccatga 440
             ||||||||||||||||||||
Sbjct: 20977 cagccaaacacctcccatga 20996

>ref|NM_001023456.1| Schizosaccharomyces pombe 972h- hypothetical protein
           (SPCC1620.07c), partial mRNA
          Length = 1005

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 189 catcgggagaagaagaagag 208
           ||||||||||||||||||||
Sbjct: 928 catcgggagaagaagaagag 909

>gb|AC025262.27|AC025262 Homo sapiens 12 BAC RP11-629N8 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 167276

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 38    tacaaaatattatgaaaaag 57
             ||||||||||||||||||||
Sbjct: 11478 tacaaaatattatgaaaaag 11459

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
              complete sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 196    agaagaagaagaggttgttg 215
              ||||||||||||||||||||
Sbjct: 265913 agaagaagaagaggttgttg 265932

>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 248    gcgatgtcgatgatggtggt 267
              ||||||||||||||||||||
Sbjct: 350218 gcgatgtcgatgatggtggt 350199

>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome
          Length = 6413771

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 423     gccaaacacctcccatgaaaccca 446
               |||||||||||||||| |||||||
Sbjct: 2923412 gccaaacacctcccatcaaaccca 2923435

>dbj|AP002842.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0075G19
          Length = 163558

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 196    agaagaagaagaggttgttg 215
              ||||||||||||||||||||
Sbjct: 130809 agaagaagaagaggttgttg 130828

>dbj|AK067892.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013123L02, full
           insert sequence
          Length = 2506

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 196 agaagaagaagaggttgttg 215
           ||||||||||||||||||||
Sbjct: 233 agaagaagaagaggttgttg 252

>gb|AC154230.2| Mus musculus BAC clone RP24-156E24 from 16, complete sequence
          Length = 136341

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 519   atcagggagaggaaccagtg 538
             ||||||||||||||||||||
Sbjct: 83998 atcagggagaggaaccagtg 84017

>gb|AC007786.1|AC007786 Homo sapiens chromosome 19, BAC 41855 (CIT-B-32o4), complete sequence
          Length = 229061

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 41    aaaatattatgaaaaagccc 60
             ||||||||||||||||||||
Sbjct: 46489 aaaatattatgaaaaagccc 46470

>gb|AC127328.6| Mus musculus BAC clone RP23-259B8 from 6, complete sequence
          Length = 186950

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 193    gggagaagaagaagaggttg 212
              ||||||||||||||||||||
Sbjct: 133347 gggagaagaagaagaggttg 133366

>gb|AC171205.1| Mus musculus BAC clone RP23-441H20 from chromosome 16, complete sequence
          Length = 212822

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 519    atcagggagaggaaccagtg 538
              ||||||||||||||||||||
Sbjct: 211696 atcagggagaggaaccagtg 211677


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,936,825
Number of Sequences: 3902068
Number of extensions: 5936825
Number of successful extensions: 139885
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 139654
Number of HSP's gapped (non-prelim): 231
length of query: 562
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 539
effective length of database: 17,143,297,704
effective search space: 9240237462456
effective search space used: 9240237462456
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)