>RNS2_ARATH (P42814) Ribonuclease 2 precursor (EC 3.1.27.1)|
          Length = 259

 Score = 99.8 bits (247), Expect = 5e-21
 Identities = 42/105 (40%), Positives = 71/105 (67%)
 Frame = -1

Query: 592 EELQYFSTALDLYFKYNVTEMLATGDILVSNGKEYALSDVIDTIKHAFGGSPQIICKKGS 413
           +E  YF T L+LY K+NVT++L     + SN ++Y L  ++  I++AF  +P+++CK+ +
Sbjct: 143 DEYNYFLTTLNLYLKHNVTDVLYQAGYVASNSEKYPLGGIVTAIQNAFHITPEVVCKRDA 202

Query: 412 VQELRLCFTKDLKPRDCLTTSAMYKNLSKSKHCPRKISLPTYDPI 278
           + E+R+CF KD KPRDC+ +    ++L+  K CP+ +SLP Y P+
Sbjct: 203 IDEIRICFYKDFKPRDCVGS----QDLTSRKSCPKYVSLPEYTPL 243

>RNDI_DICDI (Q7M438) Ribonuclease DdI precursor (EC 3.1.27.1) (RNase DdI)|
          Length = 223

 Score = 50.4 bits (119), Expect = 4e-06
 Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
 Frame = -1

Query: 580 YFSTALDLYFKYNVTEMLATGDILVSNGKEYALSDVIDTIKHAFGGSPQIICKKGSVQEL 401
           YF+T + LY ++N+T  L + +I  S+   Y   D+ + I   FGG P I C  G +  +
Sbjct: 132 YFATGIKLYTEFNITAALESENIYPSDSNTYKPVDITNAITTHFGGKPGIQCSSGQLSTV 191

Query: 400 RLCFTKD-LKPRDC 362
            +C  K+ L   DC
Sbjct: 192 AVCIDKNSLSIMDC 205

>RNPB_PHYPO (P81477) Ribonuclease Phyb (EC 3.1.27.-) (RNase Phyb)|
          Length = 180

 Score = 47.4 bits (111), Expect = 3e-05
 Identities = 32/97 (32%), Positives = 45/97 (46%), Gaps = 1/97 (1%)
 Frame = -1

Query: 589 ELQYFSTALDLYFKYNVTEMLATGDILVSNGKEYALSD-VIDTIKHAFGGSPQIICKKGS 413
           E  +F+T L LY +Y+V   L  G I    G     SD +I  I    GG P + C+  +
Sbjct: 87  EHDFFATVLSLYDQYDVKSALDNGGI--EPGSSSVSSDSLISVITDNIGGVPVLNCEGST 144

Query: 412 VQELRLCFTKDLKPRDCLTTSAMYKNLSKSKHCPRKI 302
              + LC TK+L+ RDC        N+     CP K+
Sbjct: 145 FASVGLCITKNLELRDC------PDNMGSFWDCPAKV 175

>RNOY_CRAGI (Q7M456) Ribonuclease Oy (EC 3.1.27.-) (RNase Oy)|
          Length = 213

 Score = 45.8 bits (107), Expect = 9e-05
 Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 7/102 (6%)
 Frame = -1

Query: 589 ELQYFSTALDLYFKYNVTEMLATGDILVSNGKEYALSDVIDTIKHAFGGSPQIIC----- 425
           EL+YF   L L+ KYN++ +L    IL S    Y +++    +K   G    I C     
Sbjct: 106 ELKYFGMGLKLHAKYNISRILVNQGILPSKTAGYMINETEAAVKRELGVDAVIECVYDKE 165

Query: 424 --KKGSVQELRLCFTKDLKPRDCLTTSAMYKNLSKSKHCPRK 305
             KK  + E+ +C TK+ +   C       K +S++  CPRK
Sbjct: 166 KTKKQLLYEISICLTKEFELISC-----NKKEVSETT-CPRK 201

>RNS7_NICAL (Q40381) Ribonuclease S-7 precursor (EC 3.1.27.1) (Stylar|
           glycoprotein 7) (S7-RNase)
          Length = 218

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 9/88 (10%)
 Frame = -1

Query: 583 QYFSTALDLYFKYNVTEMLATGDILVSNGKEYALSDVIDTIKHAFGGSPQIICKKGSVQ- 407
           QYF  A+ L  K+++   L    I+   G +Y +  +  TIK    G P + C KG ++ 
Sbjct: 125 QYFDLAMALKDKFDLLSSLRNHGIIPGRGMKYTVQKINSTIKKITQGYPNLSCTKGIMEL 184

Query: 406 -ELRLCFTKDLK-------PRDCLTTSA 347
            E+ +CF   +K       P+ C  T +
Sbjct: 185 VEIGICFDSMVKNVINCPHPKTCKPTGS 212

>RNT2_MOUSE (Q9CQ01) Ribonuclease T2 precursor (EC 3.1.27.-) (Ribonuclease 6)|
          Length = 259

 Score = 38.5 bits (88), Expect = 0.015
 Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 8/84 (9%)
 Frame = -1

Query: 589 ELQYFSTALDLYFKYNVTEMLATGDILVSNGKEYALSDVIDTIKHAFGGSPQIIC---KK 419
           E +YF  +LDLY + ++  +L    I  S    Y L+D  D +   +G  P+I C   ++
Sbjct: 135 EKKYFGKSLDLYKQIDLNSVLQKFGIKPSI-NYYQLADFKDALTRIYGVVPKIQCLMPEQ 193

Query: 418 G----SVQELRLCFTK-DLKPRDC 362
           G    +V ++ LCFTK DL  R+C
Sbjct: 194 GESVQTVGQIELCFTKEDLHLRNC 217

>RNRH_RHINI (P08056) Ribonuclease Rh precursor (EC 3.1.27.1) (RNase Rh)|
          Length = 238

 Score = 37.7 bits (86), Expect = 0.025
 Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
 Frame = -1

Query: 595 GEEL-QYFSTALDLYFKYNVTEMLATGDILVSNGKEYALSDVIDTIKHAFGGSPQIICKK 419
           GE++  YF  A+DL  +YNV +  ++  I  + G  Y  +++   I+  FG   +I C  
Sbjct: 143 GEDIVDYFQKAMDLRSQYNVYKAFSSNGI--TPGGTYTATEMQSAIESYFGAKAKIDCSS 200

Query: 418 GSVQELRLCF 389
           G++ ++ L F
Sbjct: 201 GTLSDVALYF 210

>RNS1_ARATH (P42813) Ribonuclease 1 precursor (EC 3.1.27.1)|
          Length = 230

 Score = 37.7 bits (86), Expect = 0.025
 Identities = 20/58 (34%), Positives = 33/58 (56%)
 Frame = -1

Query: 592 EELQYFSTALDLYFKYNVTEMLATGDILVSNGKEYALSDVIDTIKHAFGGSPQIICKK 419
           ++ +YF TAL+L  K N+   L    I   +GK Y+L  + D+IK + G +P + C +
Sbjct: 132 DQHEYFQTALNLKQKTNLLGALTKAGIN-PDGKSYSLESIRDSIKESIGFTPWVECNR 188

>RNS6_NICAL (Q40379) Ribonuclease S-6 precursor (EC 3.1.27.1) (Stylar|
           glycoprotein 6) (S6-RNase)
          Length = 215

 Score = 36.6 bits (83), Expect = 0.056
 Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 10/90 (11%)
 Frame = -1

Query: 589 ELQYFSTALDLYFKYNVTEMLATGDILVSNGKEYALSDVIDTIKHAFGGSPQIICKKGSV 410
           ++QYF  A+ L  K+++   L    I+   G +Y +  + +TIK    G P + C KG  
Sbjct: 123 QVQYFRLAMALKDKFDLLTSLKNHGII--RGYKYTVQKINNTIKTVTKGYPNLSCTKG-- 178

Query: 409 QEL---RLCFTKDLK-------PRDCLTTS 350
           QEL    +CF    K       P+ C T S
Sbjct: 179 QELWFVGICFDSTAKNVIDCPNPKTCKTAS 208

>RNY1_CANGA (Q6FP42) Ribonuclease T2-like precursor (EC 3.1.27.1) (RNase|
           T2-like)
          Length = 433

 Score = 35.8 bits (81), Expect = 0.096
 Identities = 17/47 (36%), Positives = 25/47 (53%)
 Frame = -1

Query: 580 YFSTALDLYFKYNVTEMLATGDILVSNGKEYALSDVIDTIKHAFGGS 440
           YF  + DL+ K N  EMLA  +I  SN   Y  S+++  +   F G+
Sbjct: 195 YFRISYDLFQKLNTYEMLAKHNITPSNDTSYTKSEILSALSSEFQGT 241

>RNT2_PIG (Q7M329) Ribonuclease T2 (EC 3.1.27.-)|
          Length = 200

 Score = 35.4 bits (80), Expect = 0.13
 Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 7/81 (8%)
 Frame = -1

Query: 583 QYFSTALDLYFKYNVTEMLATGDILVSNGKEYALSDVIDTIKHAFGGSPQIIC------- 425
           +YF   LDLY +  +   L    I  S    Y +SD+   +   +G  P++ C       
Sbjct: 101 KYFGKTLDLYKELALNSTLQKLGIKPSISY-YQISDIKHALVGVYGVVPKVQCLPPKSGE 159

Query: 424 KKGSVQELRLCFTKDLKPRDC 362
           K  ++ ++ LC T+DL+ +DC
Sbjct: 160 KVQTLGQIELCLTRDLQLQDC 180

>RNLX_LYCES (P80196) Intracellular ribonuclease LX precursor (EC 3.1.27.1)|
           (RNase LX)
          Length = 237

 Score = 33.9 bits (76), Expect = 0.37
 Identities = 19/56 (33%), Positives = 25/56 (44%)
 Frame = -1

Query: 580 YFSTALDLYFKYNVTEMLATGDILVSNGKEYALSDVIDTIKHAFGGSPQIICKKGS 413
           YF TALD   K N+ + L    I   NG  Y +  +   I+   G +P I C   S
Sbjct: 132 YFQTALDFKTKSNLLQNLNNAGIKPRNGDYYGVESIKKAIEKGVGHTPFIECNVDS 187

>RNS3_ARATH (P42815) Ribonuclease 3 precursor (EC 3.1.27.1)|
          Length = 222

 Score = 33.9 bits (76), Expect = 0.37
 Identities = 29/94 (30%), Positives = 41/94 (43%)
 Frame = -1

Query: 592 EELQYFSTALDLYFKYNVTEMLATGDILVSNGKEYALSDVIDTIKHAFGGSPQIICKKGS 413
           ++  YF   L L  K N+   L    I   + K Y + D+ +TIK   G +P I C K S
Sbjct: 124 DQHDYFEAGLKLKQKANLLHALTNAGIKPDD-KFYEMKDIENTIKQVVGFAPGIECNKDS 182

Query: 412 VQELRLCFTKDLKPRDCLTTSAMYKNLSKSKHCP 311
               +L      +   C+ TSA     SK  +CP
Sbjct: 183 SHNSQL-----YQIYLCVDTSA-----SKFINCP 206

>RNS2_ANTHI (Q38716) Ribonuclease S-2 precursor (EC 3.1.27.1) (Stylar|
           glycoprotein 2) (S2-RNase)
          Length = 235

 Score = 33.1 bits (74), Expect = 0.62
 Identities = 21/64 (32%), Positives = 32/64 (50%)
 Frame = -1

Query: 580 YFSTALDLYFKYNVTEMLATGDILVSNGKEYALSDVIDTIKHAFGGSPQIICKKGSVQEL 401
           YF  AL+L  + NV +ML+    L    +   +SDV   I    GG   + C +G + E+
Sbjct: 139 YFVKALELKKRNNVLDMLSRKS-LTPGDQRVDVSDVNGAITKVTGGIAILKCPEGYLTEV 197

Query: 400 RLCF 389
            +CF
Sbjct: 198 IICF 201

>ZNF73_HUMAN (O43830) Zinc finger protein 73 (Zinc finger protein 186) (hZNF2)|
          Length = 326

 Score = 32.7 bits (73), Expect = 0.81
 Identities = 20/86 (23%), Positives = 39/86 (45%), Gaps = 3/86 (3%)
 Frame = -3

Query: 467 HHQACFWG--LTADHLQEGLSSRTKVMLHQRFEAS*LPYYFGNVQEPIEIKALPSKNLPA 294
           HH+   W      DH ++  S ++K+ +HQR      PY +   ++P     +   NL  
Sbjct: 191 HHRTHTWQKPYACDHCEKAFSHKSKLTVHQRTHTGEKPYEYNECRKPF----INKSNLRI 246

Query: 293 NI*SH-RTRQFNTGDCPRSQRQWAVL 219
           +  +H R + +   +C ++  Q + L
Sbjct: 247 HQRTHIREKPYECNECGKTFHQKSFL 272

>NAS19_CAEEL (Q21181) Zinc metalloproteinase nas-19 precursor (EC 3.4.24.21)|
           (Nematode astacin 19)
          Length = 479

 Score = 32.7 bits (73), Expect = 0.81
 Identities = 23/69 (33%), Positives = 30/69 (43%), Gaps = 4/69 (5%)
 Frame = -1

Query: 490 YALSDVIDTIKHAFGGSPQIICKKG-SVQELRLCFTKDLK---PRDCLTTSAMYKNLSKS 323
           Y       TI+    G   +IC  G +V  + + F +D K   P  C T    YKN+ KS
Sbjct: 387 YITGKANSTIEITLEGLQDVICTAGCTVNGVEIKFKEDSKITSPVVCCTDKPPYKNVFKS 446

Query: 322 KHCPRKISL 296
            H P  I L
Sbjct: 447 SHNPTIIEL 455

>RNY1B_CANAL (Q5AKB1) Ribonuclease T2-like 1-B precursor (EC 3.1.27.1) (RNase|
           T2-like B)
          Length = 413

 Score = 32.7 bits (73), Expect = 0.81
 Identities = 16/52 (30%), Positives = 27/52 (51%)
 Frame = -1

Query: 580 YFSTALDLYFKYNVTEMLATGDILVSNGKEYALSDVIDTIKHAFGGSPQIIC 425
           +F  A+ L+ K    + LA   I+ +N K Y+LS++   +   FG +  I C
Sbjct: 176 FFRIAIGLFNKLPTYDWLAEAGIVPTNSKTYSLSEIQSALNDKFGANVFIKC 227

>SBCD_ECOLI (P0AG76) Nuclease sbcCD subunit D|
          Length = 400

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = -1

Query: 466 TIKHAFGGSPQIICKKGSVQELRLCFTKDLKPRDCLTTSAMYKNLSKSKH 317
           T+  + G +PQI+ ++       LC    L+PRD +T+ A    + K +H
Sbjct: 103 TVVASAGHAPQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQH 152

>SBCD_ECO57 (P0AG77) Nuclease sbcCD subunit D|
          Length = 400

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = -1

Query: 466 TIKHAFGGSPQIICKKGSVQELRLCFTKDLKPRDCLTTSAMYKNLSKSKH 317
           T+  + G +PQI+ ++       LC    L+PRD +T+ A    + K +H
Sbjct: 103 TVVASAGHAPQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQH 152

>YBL2_STRCI (P33654) Hypothetical 14.2 kDa protein in blaB 3'region|
          Length = 132

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -1

Query: 406 ELRLCFTKDLKPRDCLTTSAMYKNLSKSKHC 314
           E+R CF+  L+ R C +TSA     S  K C
Sbjct: 3   EVRSCFSSALRRRQCASTSAAVSATSSPKTC 33

>Y1348_ARCFU (O28921) Hypothetical protein AF1348|
          Length = 85

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = -1

Query: 562 DLYFKYNVTEMLATGDILVSNGKEYALSDVIDTIKHAFGG 443
           D  FK+N+  ++A G ++  +GK Y   D +D    A+GG
Sbjct: 49  DFEFKFNLDYLIAEGFVVEKDGKLYLTEDGVDL---AYGG 85


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,105,853
Number of Sequences: 219361
Number of extensions: 1818816
Number of successful extensions: 4892
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 4758
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4889
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5216272880
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)