Clone Name
rbasd22j12
Clone Library Name
barley_pub
No.
Definition
Score (bits)
E Value
1 gb|AY754697.1| Zea mays immunophilin mRNA, complete cds
287
2e-74
2 gb|AY103897.1| Zea mays PCO108516 mRNA sequence
287
2e-74
3 ref|XM_467909.1| Oryza sativa (japonica cultivar-group), mRNA
246
6e-62
4 ref|XM_506987.1| PREDICTED Oryza sativa (japonica cultivar-group...
246
6e-62
5 dbj|AK121481.1| Oryza sativa (japonica cultivar-group) cDNA clon...
246
6e-62
6 dbj|AK063850.1| Oryza sativa (japonica cultivar-group) cDNA clon...
246
6e-62
7 gb|BT016383.1| Zea mays clone Contig216 mRNA sequence
242
1e-60
8 dbj|AK100511.1| Oryza sativa (japonica cultivar-group) cDNA clon...
125
2e-25
9 dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D...
119
1e-23
10 dbj|AP004159.3| Oryza sativa (japonica cultivar-group) genomic D...
119
1e-23
11 gb|DQ428233.1| Sorghum propinquum locus PRC0268 genomic sequence
117
4e-23
12 gb|DQ428232.1| Sorghum bicolor voucher PI585454 locus PRC0268 ge...
117
4e-23
13 gb|DQ428231.1| Sorghum bicolor voucher PI267539 locus PRC0268 ge...
117
4e-23
14 gb|DQ428230.1| Sorghum bicolor voucher PI267408 locus PRC0268 ge...
117
4e-23
15 gb|DQ428229.1| Sorghum bicolor voucher PI221607 locus PRC0268 ge...
117
4e-23
16 gb|DQ428228.1| Sorghum bicolor voucher PI152702 locus PRC0268 ge...
117
4e-23
17 gb|DQ428227.1| Sorghum bicolor voucher NSL92371 locus PRC0268 ge...
117
4e-23
18 gb|DQ428226.1| Sorghum bicolor voucher NSL87902 locus PRC0268 ge...
117
4e-23
19 gb|DQ428225.1| Sorghum bicolor voucher NSL87666 locus PRC0268 ge...
117
4e-23
20 gb|DQ428224.1| Sorghum bicolor voucher NSL77217 locus PRC0268 ge...
117
4e-23
21 gb|DQ428223.1| Sorghum bicolor voucher NSL77034 locus PRC0268 ge...
117
4e-23
22 gb|DQ428222.1| Sorghum bicolor voucher NSL56174 locus PRC0268 ge...
117
4e-23
23 gb|DQ428221.1| Sorghum bicolor voucher NSL56003 locus PRC0268 ge...
117
4e-23
24 gb|DQ428220.1| Sorghum bicolor voucher NSL55243 locus PRC0268 ge...
117
4e-23
25 gb|DQ428219.1| Sorghum bicolor voucher NSL51365 locus PRC0268 ge...
117
4e-23
26 gb|DQ428218.1| Sorghum bicolor voucher NSL51030 locus PRC0268 ge...
117
4e-23
27 gb|DQ428217.1| Sorghum bicolor voucher NSL50875 locus PRC0268 ge...
117
4e-23
28 gb|U96925.1|VFU96925 Vicia faba immunophilin (FKBP12) mRNA, comp...
96
1e-16
29 gb|AY490245.1| Lycopersicon esculentum CONSTANS interacting prot...
84
5e-13
30 ref|NM_125831.2| Arabidopsis thaliana FKBP12; FK506 binding / pe...
56
1e-04
31 gb|AY081564.1| Arabidopsis thaliana immunophilin (At5g64350) mRN...
56
1e-04
32 gb|AY059928.1| Arabidopsis thaliana immunophilin (At5g64350; MSJ...
56
1e-04
33 gb|U96924.1|ATU96924 Arabidopsis thaliana immunophilin (FKBP12) ...
56
1e-04
34 gb|AY084289.1| Arabidopsis thaliana clone 10243 mRNA, complete s...
56
1e-04
35 dbj|AP007284.1| Lotus japonicus genomic DNA, chromosome 6, clone...
48
0.030
36 emb|AJ495769.1|HVU495769 Hordeum vulgare mRNA for putative immun...
42
1.8
37 gb|DQ271487.1| Mustela vison clone IX2M19 microsatellite sequence
42
1.8
38 gb|AF165999.1|AF165999 Drosophila melanogaster sodium-dependent ...
42
1.8
39 gb|M92297.2|STMBMANASE Streptomyces lividans mannanase (manA) ge...
42
1.8
40 dbj|AB027469.1| Drosophila melanogaster gene for glutamate trans...
42
1.8
41 ref|XM_636926.1| Dictyostelium discoideum hypothetical protein (...
40
7.3
42 gb|AC126538.1| Homo sapiens chromosome 16 clone CTD-3225F13, com...
40
7.3
43 gb|AC133065.3| Homo sapiens chromosome 16 clone RP11-876N24, com...
40
7.3
44 emb|AL670597.18| Mouse DNA sequence from clone RP23-235P16 on ch...
40
7.3
45 emb|AL954741.9| Zebrafish DNA sequence from clone CH211-255F4 in...
40
7.3
46 gb|AY105607.1| Zea mays PCO107138 mRNA sequence
40
7.3
47 gb|AC007014.1|AC007014 Homo sapiens chromosome 16 clone 66H6, co...
40
7.3
48 dbj|AP000781.6| Homo sapiens genomic DNA, chromosome 11 clone:RP...
40
7.3
>gb| AY754697.1 | Zea mays immunophilin mRNA, complete cds
Length = 761
Score = 287 bits (145), Expect = 2e-74
Identities = 253/289 (87%)
Strand = Plus / Minus
Query: 181 gagtttggttgaattccccaggctggagagccaccagatccataagcgtagtctggggtg 240
|||||||||||||||||||||||||| | || || | ||||||||| || || || |||
Sbjct: 411 gagtttggttgaattccccaggctgggaacccgccggctccataagcataatcaggcgtg 352
Query: 241 cacttaagacgggcgacttcacccaattgcatgtccataactccctcatcccatcctttg 300
|||| | ||| || |||||||||| ||||||| |||||||||||| ||||||||||||
Sbjct: 351 cactggatacgagcaacttcacccacttgcatggtcataactccctcgtcccatcctttg 292
Query: 301 atcactgaacccaggccaatgttgaaagcgaatggctgctgcccaggatccttggtactc 360
|||||||||||| | |||||| ||||| |||||||||||||||||| |||||||| |||
Sbjct: 291 atcactgaaccctgaccaatgctgaaactgaatggctgctgcccagggtccttggtgctc 232
Query: 361 caaaacttcttggacagatcaccgtccttgccgtagccggtgcagtggacggtgaccttc 420
||||| |||||||||||||||| ||||| ||||||||||||||||| ||||||||||||
Sbjct: 231 caaaatttcttggacagatcacgatccttcccgtagccggtgcagtgaacggtgaccttc 172
Query: 421 tggcccttgacgggcttggggccggtgccggctctcaggatctccttct 469
|||||||| | ||||||||||||||||||| ||||||||||| |||||
Sbjct: 171 tggccctttatcggcttggggccggtgccggatctcaggatctgcttct 123
>gb| AY103897.1 | Zea mays PCO108516 mRNA sequence
Length = 797
Score = 287 bits (145), Expect = 2e-74
Identities = 253/289 (87%)
Strand = Plus / Minus
Query: 181 gagtttggttgaattccccaggctggagagccaccagatccataagcgtagtctggggtg 240
|||||||||||||||||||||||||| | || || | ||||||||| || || || |||
Sbjct: 411 gagtttggttgaattccccaggctgggaacccgccggctccataagcataatcaggcgtg 352
Query: 241 cacttaagacgggcgacttcacccaattgcatgtccataactccctcatcccatcctttg 300
|||| | ||| || |||||||||| ||||||| |||||||||||| ||||||||||||
Sbjct: 351 cactggatacgagcaacttcacccacttgcatggtcataactccctcgtcccatcctttg 292
Query: 301 atcactgaacccaggccaatgttgaaagcgaatggctgctgcccaggatccttggtactc 360
|||||||||||| | |||||| ||||| |||||||||||||||||| |||||||| |||
Sbjct: 291 atcactgaaccctgaccaatgctgaaactgaatggctgctgcccagggtccttggtgctc 232
Query: 361 caaaacttcttggacagatcaccgtccttgccgtagccggtgcagtggacggtgaccttc 420
||||| |||||||||||||||| ||||| ||||||||||||||||| ||||||||||||
Sbjct: 231 caaaatttcttggacagatcacgatccttcccgtagccggtgcagtgaacggtgaccttc 172
Query: 421 tggcccttgacgggcttggggccggtgccggctctcaggatctccttct 469
|||||||| | ||||||||||||||||||| ||||||||||| |||||
Sbjct: 171 tggccctttatcggcttggggccggtgccggatctcaggatctgcttct 123
>ref| XM_467909.1 | Oryza sativa (japonica cultivar-group), mRNA
Length = 620
Score = 246 bits (124), Expect = 6e-62
Identities = 268/316 (84%)
Strand = Plus / Minus
Query: 147 ggcgctaagaacttcgatctcgaatatcagctcggagtttggttgaattccccaggctgg 206
|||||||||||| || |||||||| | |||| | ||||||||| ||||||||||||| ||
Sbjct: 434 ggcgctaagaacctcaatctcgaacaccagcactgagtttggtcgaattccccaggccgg 375
Query: 207 agagccaccagatccataagcgtagtctggggtgcacttaagacgggcgacttcacccaa 266
| | |||| || |||||| || || || |||||||||| || ||| || ||||||||||
Sbjct: 374 aaacccactagctccatacgcataatccggggtgcactgaatacgagcaacttcacccac 315
Query: 267 ttgcatgtccataactccctcatcccatcctttgatcactgaacccaggccaatgttgaa 326
||||||| |||||||||||| ||||||||||||||||| |||||| |||| || |||||
Sbjct: 314 ttgcatggtcataactccctcgtcccatcctttgatcaccgaaccctggcctatattgaa 255
Query: 327 agcgaatggctgctgcccaggatccttggtactccaaaacttcttggacagatcaccgtc 386
| |||||||| ||| || | ||||| || |||||||||||||| | |||||| ||
Sbjct: 254 actgaatggctcctggcctgcgtcctttgtgctccaaaacttcttagcgagatcattatc 195
Query: 387 cttgccgtagccggtgcagtggacggtgaccttctggcccttgacgggcttggggccggt 446
|| ||| |||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 194 tttcccgaagccggtgcagtggacggtgaccttctggcccttgacgggcttgggaccggt 135
Query: 447 gccggctctcaggatc 462
||||||| ||||||||
Sbjct: 134 gccggctttcaggatc 119
>ref| XM_506987.1 | PREDICTED Oryza sativa (japonica cultivar-group), OJ1175_B01.15
mRNA
Length = 630
Score = 246 bits (124), Expect = 6e-62
Identities = 268/316 (84%)
Strand = Plus / Minus
Query: 147 ggcgctaagaacttcgatctcgaatatcagctcggagtttggttgaattccccaggctgg 206
|||||||||||| || |||||||| | |||| | ||||||||| ||||||||||||| ||
Sbjct: 433 ggcgctaagaacctcaatctcgaacaccagcactgagtttggtcgaattccccaggccgg 374
Query: 207 agagccaccagatccataagcgtagtctggggtgcacttaagacgggcgacttcacccaa 266
| | |||| || |||||| || || || |||||||||| || ||| || ||||||||||
Sbjct: 373 aaacccactagctccatacgcataatccggggtgcactgaatacgagcaacttcacccac 314
Query: 267 ttgcatgtccataactccctcatcccatcctttgatcactgaacccaggccaatgttgaa 326
||||||| |||||||||||| ||||||||||||||||| |||||| |||| || |||||
Sbjct: 313 ttgcatggtcataactccctcgtcccatcctttgatcaccgaaccctggcctatattgaa 254
Query: 327 agcgaatggctgctgcccaggatccttggtactccaaaacttcttggacagatcaccgtc 386
| |||||||| ||| || | ||||| || |||||||||||||| | |||||| ||
Sbjct: 253 actgaatggctcctggcctgcgtcctttgtgctccaaaacttcttagcgagatcattatc 194
Query: 387 cttgccgtagccggtgcagtggacggtgaccttctggcccttgacgggcttggggccggt 446
|| ||| |||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 193 tttcccgaagccggtgcagtggacggtgaccttctggcccttgacgggcttgggaccggt 134
Query: 447 gccggctctcaggatc 462
||||||| ||||||||
Sbjct: 133 gccggctttcaggatc 118
>dbj| AK121481.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J023149K16, full
insert sequence
Length = 620
Score = 246 bits (124), Expect = 6e-62
Identities = 268/316 (84%)
Strand = Plus / Minus
Query: 147 ggcgctaagaacttcgatctcgaatatcagctcggagtttggttgaattccccaggctgg 206
|||||||||||| || |||||||| | |||| | ||||||||| ||||||||||||| ||
Sbjct: 434 ggcgctaagaacctcaatctcgaacaccagcactgagtttggtcgaattccccaggccgg 375
Query: 207 agagccaccagatccataagcgtagtctggggtgcacttaagacgggcgacttcacccaa 266
| | |||| || |||||| || || || |||||||||| || ||| || ||||||||||
Sbjct: 374 aaacccactagctccatacgcataatccggggtgcactgaatacgagcaacttcacccac 315
Query: 267 ttgcatgtccataactccctcatcccatcctttgatcactgaacccaggccaatgttgaa 326
||||||| |||||||||||| ||||||||||||||||| |||||| |||| || |||||
Sbjct: 314 ttgcatggtcataactccctcgtcccatcctttgatcaccgaaccctggcctatattgaa 255
Query: 327 agcgaatggctgctgcccaggatccttggtactccaaaacttcttggacagatcaccgtc 386
| |||||||| ||| || | ||||| || |||||||||||||| | |||||| ||
Sbjct: 254 actgaatggctcctggcctgcgtcctttgtgctccaaaacttcttagcgagatcattatc 195
Query: 387 cttgccgtagccggtgcagtggacggtgaccttctggcccttgacgggcttggggccggt 446
|| ||| |||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 194 tttcccgaagccggtgcagtggacggtgaccttctggcccttgacgggcttgggaccggt 135
Query: 447 gccggctctcaggatc 462
||||||| ||||||||
Sbjct: 134 gccggctttcaggatc 119
>dbj| AK063850.1 | Oryza sativa (japonica cultivar-group) cDNA clone:001-122-C11, full
insert sequence
Length = 630
Score = 246 bits (124), Expect = 6e-62
Identities = 268/316 (84%)
Strand = Plus / Minus
Query: 147 ggcgctaagaacttcgatctcgaatatcagctcggagtttggttgaattccccaggctgg 206
|||||||||||| || |||||||| | |||| | ||||||||| ||||||||||||| ||
Sbjct: 433 ggcgctaagaacctcaatctcgaacaccagcactgagtttggtcgaattccccaggccgg 374
Query: 207 agagccaccagatccataagcgtagtctggggtgcacttaagacgggcgacttcacccaa 266
| | |||| || |||||| || || || |||||||||| || ||| || ||||||||||
Sbjct: 373 aaacccactagctccatacgcataatccggggtgcactgaatacgagcaacttcacccac 314
Query: 267 ttgcatgtccataactccctcatcccatcctttgatcactgaacccaggccaatgttgaa 326
||||||| |||||||||||| ||||||||||||||||| |||||| |||| || |||||
Sbjct: 313 ttgcatggtcataactccctcgtcccatcctttgatcaccgaaccctggcctatattgaa 254
Query: 327 agcgaatggctgctgcccaggatccttggtactccaaaacttcttggacagatcaccgtc 386
| |||||||| ||| || | ||||| || |||||||||||||| | |||||| ||
Sbjct: 253 actgaatggctcctggcctgcgtcctttgtgctccaaaacttcttagcgagatcattatc 194
Query: 387 cttgccgtagccggtgcagtggacggtgaccttctggcccttgacgggcttggggccggt 446
|| ||| |||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 193 tttcccgaagccggtgcagtggacggtgaccttctggcccttgacgggcttgggaccggt 134
Query: 447 gccggctctcaggatc 462
||||||| ||||||||
Sbjct: 133 gccggctttcaggatc 118
>gb| BT016383.1 | Zea mays clone Contig216 mRNA sequence
Length = 995
Score = 242 bits (122), Expect = 1e-60
Identities = 191/214 (89%)
Strand = Plus / Minus
Query: 256 acttcacccaattgcatgtccataactccctcatcccatcctttgatcactgaacccagg 315
|||||||||| ||||||| |||||||||||| |||||||||||||||||||||||| |
Sbjct: 338 acttcacccacttgcatggtcataactccctcgtcccatcctttgatcactgaaccctga 279
Query: 316 ccaatgttgaaagcgaatggctgctgcccaggatccttggtactccaaaacttcttggac 375
|||||| ||||| |||||||||||||||||| |||||||| |||||||| |||||||||
Sbjct: 278 ccaatgctgaaactgaatggctgctgcccagggtccttggtgctccaaaatttcttggac 219
Query: 376 agatcaccgtccttgccgtagccggtgcagtggacggtgaccttctggcccttgacgggc 435
||||||| ||||| ||||||||||||||||| |||||||||||| | ||||| | |||
Sbjct: 218 agatcacgatccttcccgtagccggtgcagtgaacggtgaccttccgcccctttatcggc 159
Query: 436 ttggggccggtgccggctctcaggatctccttct 469
|||||||||||||||| ||||||||||| |||||
Sbjct: 158 ttggggccggtgccggatctcaggatctgcttct 125
Score = 52.0 bits (26), Expect = 0.002
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 181 gagtttggttgaattccccaggctgg 206
||||||||||||||||||||||||||
Sbjct: 677 gagtttggttgaattccccaggctgg 652
>dbj| AK100511.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J023099N19, full
insert sequence
Length = 1896
Score = 125 bits (63), Expect = 2e-25
Identities = 102/115 (88%)
Strand = Plus / Minus
Query: 348 atccttggtactccaaaacttcttggacagatcaccgtccttgccgtagccggtgcagtg 407
|||||| || |||||||||||||| | |||||| || || ||| |||||||||||||
Sbjct: 230 atcctttgtgctccaaaacttcttagcgagatcattatctttcccgaagccggtgcagtg 171
Query: 408 gacggtgaccttctggcccttgacgggcttggggccggtgccggctctcaggatc 462
||||||||||||||||||||||||||||||||| |||||||||||| ||||||||
Sbjct: 170 gacggtgaccttctggcccttgacgggcttgggaccggtgccggctttcaggatc 116
>dbj| AP008208.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
sequence
Length = 35954743
Score = 119 bits (60), Expect = 1e-23
Identities = 66/68 (97%)
Strand = Plus / Plus
Query: 395 agccggtgcagtggacggtgaccttctggcccttgacgggcttggggccggtgccggctc 454
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 32038147 agccggtgcagtggacggtgaccttctggcccttgacgggcttgggaccggtgccggctt 32038206
Query: 455 tcaggatc 462
||||||||
Sbjct: 32038207 tcaggatc 32038214
Score = 67.9 bits (34), Expect = 3e-08
Identities = 82/98 (83%)
Strand = Plus / Plus
Query: 147 ggcgctaagaacttcgatctcgaatatcagctcggagtttggttgaattccccaggctgg 206
|||||||||||| || |||||||| | |||| | ||||||||| ||||||||||||| ||
Sbjct: 32036451 ggcgctaagaacctcaatctcgaacaccagcactgagtttggtcgaattccccaggccgg 32036510
Query: 207 agagccaccagatccataagcgtagtctggggtgcact 244
| | |||| || |||||| || || || ||||||||||
Sbjct: 32036511 aaacccactagctccatacgcataatccggggtgcact 32036548
Score = 52.0 bits (26), Expect = 0.002
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 256 acttcacccaattgcatgtccataactccctcatcccatcct 297
|||||||||| ||||||| |||||||||||| |||||||||
Sbjct: 32036880 acttcacccacttgcatggtcataactccctcgtcccatcct 32036921
>dbj| AP004159.3 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OJ1175_B01
Length = 96191
Score = 119 bits (60), Expect = 1e-23
Identities = 66/68 (97%)
Strand = Plus / Plus
Query: 395 agccggtgcagtggacggtgaccttctggcccttgacgggcttggggccggtgccggctc 454
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 58522 agccggtgcagtggacggtgaccttctggcccttgacgggcttgggaccggtgccggctt 58581
Query: 455 tcaggatc 462
||||||||
Sbjct: 58582 tcaggatc 58589
Score = 67.9 bits (34), Expect = 3e-08
Identities = 82/98 (83%)
Strand = Plus / Plus
Query: 147 ggcgctaagaacttcgatctcgaatatcagctcggagtttggttgaattccccaggctgg 206
|||||||||||| || |||||||| | |||| | ||||||||| ||||||||||||| ||
Sbjct: 56826 ggcgctaagaacctcaatctcgaacaccagcactgagtttggtcgaattccccaggccgg 56885
Query: 207 agagccaccagatccataagcgtagtctggggtgcact 244
| | |||| || |||||| || || || ||||||||||
Sbjct: 56886 aaacccactagctccatacgcataatccggggtgcact 56923
Score = 52.0 bits (26), Expect = 0.002
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 256 acttcacccaattgcatgtccataactccctcatcccatcct 297
|||||||||| ||||||| |||||||||||| |||||||||
Sbjct: 57255 acttcacccacttgcatggtcataactccctcgtcccatcct 57296
>gb| DQ428233.1 | Sorghum propinquum locus PRC0268 genomic sequence
Length = 798
Score = 117 bits (59), Expect = 4e-23
Identities = 74/79 (93%)
Strand = Plus / Minus
Query: 391 ccgtagccggtgcagtggacggtgaccttctggcccttgacgggcttggggccggtgccg 450
|||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||
Sbjct: 110 ccgtagccggtgcagtggacggtgaccttctggccctttaccggcttggggccggtcccg 51
Query: 451 gctctcaggatctccttct 469
||||||| ||||| |||||
Sbjct: 50 gctctcaagatctgcttct 32
Score = 91.7 bits (46), Expect = 2e-15
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 295 cctttgatcactgaacccaggccaatgttgaaagcgaatggctgctgcccaggatccttg 354
|||||||||||||||||||| |||||||||||| |||||||||||||||||| ||||||
Sbjct: 652 cctttgatcactgaacccagaccaatgttgaaactgaatggctgctgcccagggtccttg 593
Query: 355 gt 356
||
Sbjct: 592 gt 591
>gb| DQ428232.1 | Sorghum bicolor voucher PI585454 locus PRC0268 genomic sequence
Length = 801
Score = 117 bits (59), Expect = 4e-23
Identities = 74/79 (93%)
Strand = Plus / Minus
Query: 391 ccgtagccggtgcagtggacggtgaccttctggcccttgacgggcttggggccggtgccg 450
|||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||
Sbjct: 113 ccgtagccggtgcagtggacggtgaccttctggccctttaccggcttggggccggtcccg 54
Query: 451 gctctcaggatctccttct 469
||||||| ||||| |||||
Sbjct: 53 gctctcaagatctgcttct 35
Score = 91.7 bits (46), Expect = 2e-15
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 295 cctttgatcactgaacccaggccaatgttgaaagcgaatggctgctgcccaggatccttg 354
|||||||||||||||||||| |||||||||||| |||||||||||||||||| ||||||
Sbjct: 655 cctttgatcactgaacccagaccaatgttgaaactgaatggctgctgcccagggtccttg 596
Query: 355 gt 356
||
Sbjct: 595 gt 594
>gb| DQ428231.1 | Sorghum bicolor voucher PI267539 locus PRC0268 genomic sequence
Length = 801
Score = 117 bits (59), Expect = 4e-23
Identities = 74/79 (93%)
Strand = Plus / Minus
Query: 391 ccgtagccggtgcagtggacggtgaccttctggcccttgacgggcttggggccggtgccg 450
|||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||
Sbjct: 113 ccgtagccggtgcagtggacggtgaccttctggccctttaccggcttggggccggtcccg 54
Query: 451 gctctcaggatctccttct 469
||||||| ||||| |||||
Sbjct: 53 gctctcaagatctgcttct 35
Score = 91.7 bits (46), Expect = 2e-15
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 295 cctttgatcactgaacccaggccaatgttgaaagcgaatggctgctgcccaggatccttg 354
|||||||||||||||||||| |||||||||||| |||||||||||||||||| ||||||
Sbjct: 655 cctttgatcactgaacccagaccaatgttgaaactgaatggctgctgcccagggtccttg 596
Query: 355 gt 356
||
Sbjct: 595 gt 594
>gb| DQ428230.1 | Sorghum bicolor voucher PI267408 locus PRC0268 genomic sequence
Length = 801
Score = 117 bits (59), Expect = 4e-23
Identities = 74/79 (93%)
Strand = Plus / Minus
Query: 391 ccgtagccggtgcagtggacggtgaccttctggcccttgacgggcttggggccggtgccg 450
|||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||
Sbjct: 113 ccgtagccggtgcagtggacggtgaccttctggccctttaccggcttggggccggtcccg 54
Query: 451 gctctcaggatctccttct 469
||||||| ||||| |||||
Sbjct: 53 gctctcaagatctgcttct 35
Score = 91.7 bits (46), Expect = 2e-15
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 295 cctttgatcactgaacccaggccaatgttgaaagcgaatggctgctgcccaggatccttg 354
|||||||||||||||||||| |||||||||||| |||||||||||||||||| ||||||
Sbjct: 655 cctttgatcactgaacccagaccaatgttgaaactgaatggctgctgcccagggtccttg 596
Query: 355 gt 356
||
Sbjct: 595 gt 594
>gb| DQ428229.1 | Sorghum bicolor voucher PI221607 locus PRC0268 genomic sequence
Length = 801
Score = 117 bits (59), Expect = 4e-23
Identities = 74/79 (93%)
Strand = Plus / Minus
Query: 391 ccgtagccggtgcagtggacggtgaccttctggcccttgacgggcttggggccggtgccg 450
|||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||
Sbjct: 113 ccgtagccggtgcagtggacggtgaccttctggccctttaccggcttggggccggtcccg 54
Query: 451 gctctcaggatctccttct 469
||||||| ||||| |||||
Sbjct: 53 gctctcaagatctgcttct 35
Score = 91.7 bits (46), Expect = 2e-15
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 295 cctttgatcactgaacccaggccaatgttgaaagcgaatggctgctgcccaggatccttg 354
|||||||||||||||||||| |||||||||||| |||||||||||||||||| ||||||
Sbjct: 655 cctttgatcactgaacccagaccaatgttgaaactgaatggctgctgcccagggtccttg 596
Query: 355 gt 356
||
Sbjct: 595 gt 594
>gb| DQ428228.1 | Sorghum bicolor voucher PI152702 locus PRC0268 genomic sequence
Length = 801
Score = 117 bits (59), Expect = 4e-23
Identities = 74/79 (93%)
Strand = Plus / Minus
Query: 391 ccgtagccggtgcagtggacggtgaccttctggcccttgacgggcttggggccggtgccg 450
|||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||
Sbjct: 113 ccgtagccggtgcagtggacggtgaccttctggccctttaccggcttggggccggtcccg 54
Query: 451 gctctcaggatctccttct 469
||||||| ||||| |||||
Sbjct: 53 gctctcaagatctgcttct 35
Score = 91.7 bits (46), Expect = 2e-15
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 295 cctttgatcactgaacccaggccaatgttgaaagcgaatggctgctgcccaggatccttg 354
|||||||||||||||||||| |||||||||||| |||||||||||||||||| ||||||
Sbjct: 655 cctttgatcactgaacccagaccaatgttgaaactgaatggctgctgcccagggtccttg 596
Query: 355 gt 356
||
Sbjct: 595 gt 594
>gb| DQ428227.1 | Sorghum bicolor voucher NSL92371 locus PRC0268 genomic sequence
Length = 801
Score = 117 bits (59), Expect = 4e-23
Identities = 74/79 (93%)
Strand = Plus / Minus
Query: 391 ccgtagccggtgcagtggacggtgaccttctggcccttgacgggcttggggccggtgccg 450
|||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||
Sbjct: 113 ccgtagccggtgcagtggacggtgaccttctggccctttaccggcttggggccggtcccg 54
Query: 451 gctctcaggatctccttct 469
||||||| ||||| |||||
Sbjct: 53 gctctcaagatctgcttct 35
Score = 91.7 bits (46), Expect = 2e-15
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 295 cctttgatcactgaacccaggccaatgttgaaagcgaatggctgctgcccaggatccttg 354
|||||||||||||||||||| |||||||||||| |||||||||||||||||| ||||||
Sbjct: 655 cctttgatcactgaacccagaccaatgttgaaactgaatggctgctgcccagggtccttg 596
Query: 355 gt 356
||
Sbjct: 595 gt 594
>gb| DQ428226.1 | Sorghum bicolor voucher NSL87902 locus PRC0268 genomic sequence
Length = 801
Score = 117 bits (59), Expect = 4e-23
Identities = 74/79 (93%)
Strand = Plus / Minus
Query: 391 ccgtagccggtgcagtggacggtgaccttctggcccttgacgggcttggggccggtgccg 450
|||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||
Sbjct: 113 ccgtagccggtgcagtggacggtgaccttctggccctttaccggcttggggccggtcccg 54
Query: 451 gctctcaggatctccttct 469
||||||| ||||| |||||
Sbjct: 53 gctctcaagatctgcttct 35
Score = 91.7 bits (46), Expect = 2e-15
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 295 cctttgatcactgaacccaggccaatgttgaaagcgaatggctgctgcccaggatccttg 354
|||||||||||||||||||| |||||||||||| |||||||||||||||||| ||||||
Sbjct: 655 cctttgatcactgaacccagaccaatgttgaaactgaatggctgctgcccagggtccttg 596
Query: 355 gt 356
||
Sbjct: 595 gt 594
>gb| DQ428225.1 | Sorghum bicolor voucher NSL87666 locus PRC0268 genomic sequence
Length = 801
Score = 117 bits (59), Expect = 4e-23
Identities = 74/79 (93%)
Strand = Plus / Minus
Query: 391 ccgtagccggtgcagtggacggtgaccttctggcccttgacgggcttggggccggtgccg 450
|||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||
Sbjct: 113 ccgtagccggtgcagtggacggtgaccttctggccctttaccggcttggggccggtcccg 54
Query: 451 gctctcaggatctccttct 469
||||||| ||||| |||||
Sbjct: 53 gctctcaagatctgcttct 35
Score = 91.7 bits (46), Expect = 2e-15
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 295 cctttgatcactgaacccaggccaatgttgaaagcgaatggctgctgcccaggatccttg 354
|||||||||||||||||||| |||||||||||| |||||||||||||||||| ||||||
Sbjct: 655 cctttgatcactgaacccagaccaatgttgaaactgaatggctgctgcccagggtccttg 596
Query: 355 gt 356
||
Sbjct: 595 gt 594
>gb| DQ428224.1 | Sorghum bicolor voucher NSL77217 locus PRC0268 genomic sequence
Length = 801
Score = 117 bits (59), Expect = 4e-23
Identities = 74/79 (93%)
Strand = Plus / Minus
Query: 391 ccgtagccggtgcagtggacggtgaccttctggcccttgacgggcttggggccggtgccg 450
|||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||
Sbjct: 113 ccgtagccggtgcagtggacggtgaccttctggccctttaccggcttggggccggtcccg 54
Query: 451 gctctcaggatctccttct 469
||||||| ||||| |||||
Sbjct: 53 gctctcaagatctgcttct 35
Score = 91.7 bits (46), Expect = 2e-15
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 295 cctttgatcactgaacccaggccaatgttgaaagcgaatggctgctgcccaggatccttg 354
|||||||||||||||||||| |||||||||||| |||||||||||||||||| ||||||
Sbjct: 655 cctttgatcactgaacccagaccaatgttgaaactgaatggctgctgcccagggtccttg 596
Query: 355 gt 356
||
Sbjct: 595 gt 594
>gb| DQ428223.1 | Sorghum bicolor voucher NSL77034 locus PRC0268 genomic sequence
Length = 801
Score = 117 bits (59), Expect = 4e-23
Identities = 74/79 (93%)
Strand = Plus / Minus
Query: 391 ccgtagccggtgcagtggacggtgaccttctggcccttgacgggcttggggccggtgccg 450
|||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||
Sbjct: 113 ccgtagccggtgcagtggacggtgaccttctggccctttaccggcttggggccggtcccg 54
Query: 451 gctctcaggatctccttct 469
||||||| ||||| |||||
Sbjct: 53 gctctcaagatctgcttct 35
Score = 91.7 bits (46), Expect = 2e-15
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 295 cctttgatcactgaacccaggccaatgttgaaagcgaatggctgctgcccaggatccttg 354
|||||||||||||||||||| |||||||||||| |||||||||||||||||| ||||||
Sbjct: 655 cctttgatcactgaacccagaccaatgttgaaactgaatggctgctgcccagggtccttg 596
Query: 355 gt 356
||
Sbjct: 595 gt 594
>gb| DQ428222.1 | Sorghum bicolor voucher NSL56174 locus PRC0268 genomic sequence
Length = 801
Score = 117 bits (59), Expect = 4e-23
Identities = 74/79 (93%)
Strand = Plus / Minus
Query: 391 ccgtagccggtgcagtggacggtgaccttctggcccttgacgggcttggggccggtgccg 450
|||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||
Sbjct: 113 ccgtagccggtgcagtggacggtgaccttctggccctttaccggcttggggccggtcccg 54
Query: 451 gctctcaggatctccttct 469
||||||| ||||| |||||
Sbjct: 53 gctctcaagatctgcttct 35
Score = 91.7 bits (46), Expect = 2e-15
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 295 cctttgatcactgaacccaggccaatgttgaaagcgaatggctgctgcccaggatccttg 354
|||||||||||||||||||| |||||||||||| |||||||||||||||||| ||||||
Sbjct: 655 cctttgatcactgaacccagaccaatgttgaaactgaatggctgctgcccagggtccttg 596
Query: 355 gt 356
||
Sbjct: 595 gt 594
>gb| DQ428221.1 | Sorghum bicolor voucher NSL56003 locus PRC0268 genomic sequence
Length = 801
Score = 117 bits (59), Expect = 4e-23
Identities = 74/79 (93%)
Strand = Plus / Minus
Query: 391 ccgtagccggtgcagtggacggtgaccttctggcccttgacgggcttggggccggtgccg 450
|||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||
Sbjct: 113 ccgtagccggtgcagtggacggtgaccttctggccctttaccggcttggggccggtcccg 54
Query: 451 gctctcaggatctccttct 469
||||||| ||||| |||||
Sbjct: 53 gctctcaagatctgcttct 35
Score = 91.7 bits (46), Expect = 2e-15
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 295 cctttgatcactgaacccaggccaatgttgaaagcgaatggctgctgcccaggatccttg 354
|||||||||||||||||||| |||||||||||| |||||||||||||||||| ||||||
Sbjct: 655 cctttgatcactgaacccagaccaatgttgaaactgaatggctgctgcccagggtccttg 596
Query: 355 gt 356
||
Sbjct: 595 gt 594
>gb| DQ428220.1 | Sorghum bicolor voucher NSL55243 locus PRC0268 genomic sequence
Length = 801
Score = 117 bits (59), Expect = 4e-23
Identities = 74/79 (93%)
Strand = Plus / Minus
Query: 391 ccgtagccggtgcagtggacggtgaccttctggcccttgacgggcttggggccggtgccg 450
|||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||
Sbjct: 113 ccgtagccggtgcagtggacggtgaccttctggccctttaccggcttggggccggtcccg 54
Query: 451 gctctcaggatctccttct 469
||||||| ||||| |||||
Sbjct: 53 gctctcaagatctgcttct 35
Score = 91.7 bits (46), Expect = 2e-15
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 295 cctttgatcactgaacccaggccaatgttgaaagcgaatggctgctgcccaggatccttg 354
|||||||||||||||||||| |||||||||||| |||||||||||||||||| ||||||
Sbjct: 655 cctttgatcactgaacccagaccaatgttgaaactgaatggctgctgcccagggtccttg 596
Query: 355 gt 356
||
Sbjct: 595 gt 594
>gb| DQ428219.1 | Sorghum bicolor voucher NSL51365 locus PRC0268 genomic sequence
Length = 801
Score = 117 bits (59), Expect = 4e-23
Identities = 74/79 (93%)
Strand = Plus / Minus
Query: 391 ccgtagccggtgcagtggacggtgaccttctggcccttgacgggcttggggccggtgccg 450
|||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||
Sbjct: 113 ccgtagccggtgcagtggacggtgaccttctggccctttaccggcttggggccggtcccg 54
Query: 451 gctctcaggatctccttct 469
||||||| ||||| |||||
Sbjct: 53 gctctcaagatctgcttct 35
Score = 91.7 bits (46), Expect = 2e-15
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 295 cctttgatcactgaacccaggccaatgttgaaagcgaatggctgctgcccaggatccttg 354
|||||||||||||||||||| |||||||||||| |||||||||||||||||| ||||||
Sbjct: 655 cctttgatcactgaacccagaccaatgttgaaactgaatggctgctgcccagggtccttg 596
Query: 355 gt 356
||
Sbjct: 595 gt 594
>gb| DQ428218.1 | Sorghum bicolor voucher NSL51030 locus PRC0268 genomic sequence
Length = 801
Score = 117 bits (59), Expect = 4e-23
Identities = 74/79 (93%)
Strand = Plus / Minus
Query: 391 ccgtagccggtgcagtggacggtgaccttctggcccttgacgggcttggggccggtgccg 450
|||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||
Sbjct: 113 ccgtagccggtgcagtggacggtgaccttctggccctttaccggcttggggccggtcccg 54
Query: 451 gctctcaggatctccttct 469
||||||| ||||| |||||
Sbjct: 53 gctctcaagatctgcttct 35
Score = 91.7 bits (46), Expect = 2e-15
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 295 cctttgatcactgaacccaggccaatgttgaaagcgaatggctgctgcccaggatccttg 354
|||||||||||||||||||| |||||||||||| |||||||||||||||||| ||||||
Sbjct: 655 cctttgatcactgaacccagaccaatgttgaaactgaatggctgctgcccagggtccttg 596
Query: 355 gt 356
||
Sbjct: 595 gt 594
>gb| DQ428217.1 | Sorghum bicolor voucher NSL50875 locus PRC0268 genomic sequence
Length = 801
Score = 117 bits (59), Expect = 4e-23
Identities = 74/79 (93%)
Strand = Plus / Minus
Query: 391 ccgtagccggtgcagtggacggtgaccttctggcccttgacgggcttggggccggtgccg 450
|||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||
Sbjct: 113 ccgtagccggtgcagtggacggtgaccttctggccctttaccggcttggggccggtcccg 54
Query: 451 gctctcaggatctccttct 469
||||||| ||||| |||||
Sbjct: 53 gctctcaagatctgcttct 35
Score = 91.7 bits (46), Expect = 2e-15
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 295 cctttgatcactgaacccaggccaatgttgaaagcgaatggctgctgcccaggatccttg 354
|||||||||||||||||||| |||||||||||| |||||||||||||||||| ||||||
Sbjct: 655 cctttgatcactgaacccagaccaatgttgaaactgaatggctgctgcccagggtccttg 596
Query: 355 gt 356
||
Sbjct: 595 gt 594
>gb| U96925.1 |VFU96925 Vicia faba immunophilin (FKBP12) mRNA, complete cds
Length = 574
Score = 95.6 bits (48), Expect = 1e-16
Identities = 117/140 (83%)
Strand = Plus / Minus
Query: 286 tcatcccatcctttgatcactgaacccaggccaatgttgaaagcgaatggctgctgccca 345
||||||||||||||||| || ||||| |||| || ||||||| |||||| | ||| |||
Sbjct: 221 tcatcccatcctttgatgacagaaccttggccgattttgaaagtgaatggattctggcca 162
Query: 346 ggatccttggtactccaaaacttcttggacagatcaccgtccttgccgtagccggtgcag 405
|||||||| || ||||| ||||||| || || ||||||| || ||||| |||||||||
Sbjct: 161 ggatccttcgtgctccagaacttctgagaaaggtcaccgtttttaccgtaaccggtgcag 102
Query: 406 tggacggtgaccttctggcc 425
|| |||||||| ||||||||
Sbjct: 101 tgaacggtgacgttctggcc 82
>gb| AY490245.1 | Lycopersicon esculentum CONSTANS interacting protein 3 (CIP3) mRNA,
complete cds
Length = 617
Score = 83.8 bits (42), Expect = 5e-13
Identities = 153/190 (80%)
Strand = Plus / Minus
Query: 181 gagtttggttgaattccccaggctggagagccaccagatccataagcgtagtctggggtg 240
||||| || ||||| ||||| |||||| | ||||||| |||||||| || || ||||||
Sbjct: 314 gagttgggctgaataccccatgctggaaatccaccagcaccataagcataatcaggggtg 255
Query: 241 cacttaagacgggcgacttcacccaattgcatgtccataactccctcatcccatcctttg 300
||| | | || || ||||| |||||||||||| ||| ||||| |||||||||||||||
Sbjct: 254 cacgttaatcgagcaacttctcccaattgcatgcccagtactccttcatcccatcctttg 195
Query: 301 atcactgaacccaggccaatgttgaaagcgaatggctgctgcccaggatccttggtactc 360
|| ||| || |||| || ||||||| ||| |||||||| || |||||||| || |||
Sbjct: 194 ataactttgccttggccgatcttgaaagagaaaggctgctggcctggatccttagtgctc 135
Query: 361 caaaacttct 370
|| |||||||
Sbjct: 134 cagaacttct 125
>ref| NM_125831.2 | Arabidopsis thaliana FKBP12; FK506 binding / peptidyl-prolyl
cis-trans isomerase AT5G64350 (FKBP12) mRNA, complete
cds
Length = 632
Score = 56.0 bits (28), Expect = 1e-04
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 349 tccttggtactccaaaacttcttggacagatcaccgtccttgccgtagccggtgcagtgg 408
||||| |||||||| ||||||| ||| |||||||| || || ||| | |||||||| |||
Sbjct: 212 tcctttgtactccagaacttctgggatagatcaccatctttcccgaatccggtgcaatgg 153
Query: 409 acggtgac 416
||||||||
Sbjct: 152 acggtgac 145
Score = 42.1 bits (21), Expect = 1.8
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 277 ataactccctcatcccatcctttgatcac 305
||||| || ||||||||||||||||||||
Sbjct: 284 ataacgccttcatcccatcctttgatcac 256
>gb| AY081564.1 | Arabidopsis thaliana immunophilin (At5g64350) mRNA, complete cds
Length = 510
Score = 56.0 bits (28), Expect = 1e-04
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 349 tccttggtactccaaaacttcttggacagatcaccgtccttgccgtagccggtgcagtgg 408
||||| |||||||| ||||||| ||| |||||||| || || ||| | |||||||| |||
Sbjct: 131 tcctttgtactccagaacttctgggatagatcaccatctttcccgaatccggtgcaatgg 72
Query: 409 acggtgac 416
||||||||
Sbjct: 71 acggtgac 64
Score = 42.1 bits (21), Expect = 1.8
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 277 ataactccctcatcccatcctttgatcac 305
||||| || ||||||||||||||||||||
Sbjct: 203 ataacgccttcatcccatcctttgatcac 175
>gb| AY059928.1 | Arabidopsis thaliana immunophilin (At5g64350; MSJ1.19) mRNA,
complete cds
Length = 590
Score = 56.0 bits (28), Expect = 1e-04
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 349 tccttggtactccaaaacttcttggacagatcaccgtccttgccgtagccggtgcagtgg 408
||||| |||||||| ||||||| ||| |||||||| || || ||| | |||||||| |||
Sbjct: 189 tcctttgtactccagaacttctgggatagatcaccatctttcccgaatccggtgcaatgg 130
Query: 409 acggtgac 416
||||||||
Sbjct: 129 acggtgac 122
Score = 42.1 bits (21), Expect = 1.8
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 277 ataactccctcatcccatcctttgatcac 305
||||| || ||||||||||||||||||||
Sbjct: 261 ataacgccttcatcccatcctttgatcac 233
>gb| U96924.1 |ATU96924 Arabidopsis thaliana immunophilin (FKBP12) mRNA, complete cds
Length = 617
Score = 56.0 bits (28), Expect = 1e-04
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 349 tccttggtactccaaaacttcttggacagatcaccgtccttgccgtagccggtgcagtgg 408
||||| |||||||| ||||||| ||| |||||||| || || ||| | |||||||| |||
Sbjct: 166 tcctttgtactccagaacttctgggatagatcaccatctttcccgaatccggtgcaatgg 107
Query: 409 acggtgac 416
||||||||
Sbjct: 106 acggtgac 99
Score = 42.1 bits (21), Expect = 1.8
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 277 ataactccctcatcccatcctttgatcac 305
||||| || ||||||||||||||||||||
Sbjct: 238 ataacgccttcatcccatcctttgatcac 210
>gb| AY084289.1 | Arabidopsis thaliana clone 10243 mRNA, complete sequence
Length = 582
Score = 56.0 bits (28), Expect = 1e-04
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 349 tccttggtactccaaaacttcttggacagatcaccgtccttgccgtagccggtgcagtgg 408
||||| |||||||| ||||||| ||| |||||||| || || ||| | |||||||| |||
Sbjct: 212 tcctttgtactccagaacttctgggatagatcaccatctttcccgaatccggtgcaatgg 153
Query: 409 acggtgac 416
||||||||
Sbjct: 152 acggtgac 145
Score = 42.1 bits (21), Expect = 1.8
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 277 ataactccctcatcccatcctttgatcac 305
||||| || ||||||||||||||||||||
Sbjct: 284 ataacgccttcatcccatcctttgatcac 256
>dbj| AP007284.1 | Lotus japonicus genomic DNA, chromosome 6, clone:LjT23F02, TM0183,
complete sequence
Length = 70173
Score = 48.1 bits (24), Expect = 0.030
Identities = 54/64 (84%)
Strand = Plus / Minus
Query: 181 gagtttggttgaattccccaggctggagagccaccagatccataagcgtagtctggggtg 240
||||||||||| |||||||| || ||| ||||||||| |||||||| || || |||| |
Sbjct: 48445 gagtttggttgtattccccaagcaggaaagccaccagcaccataagcataatcaggggag 48386
Query: 241 cact 244
||||
Sbjct: 48385 cact 48382
Score = 42.1 bits (21), Expect = 1.8
Identities = 60/73 (82%)
Strand = Plus / Minus
Query: 295 cctttgatcactgaacccaggccaatgttgaaagcgaatggctgctgcccaggatccttg 354
|||||||| || ||||| |||| || ||||||| ||| || | ||| |||||||||||
Sbjct: 47727 cctttgataacagaaccttggccgattttgaaagtgaaaggtttctggccaggatccttt 47668
Query: 355 gtactccaaaact 367
|| ||||||||||
Sbjct: 47667 gtgctccaaaact 47655
>emb| AJ495769.1 |HVU495769 Hordeum vulgare mRNA for putative immunophilin
Length = 835
Score = 42.1 bits (21), Expect = 1.8
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 282 tccctcatcccatcctttgatcact 306
||||| |||||||||||||||||||
Sbjct: 367 tccctgatcccatcctttgatcact 343
>gb| DQ271487.1 | Mustela vison clone IX2M19 microsatellite sequence
Length = 852
Score = 42.1 bits (21), Expect = 1.8
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 267 ttgcatgtccataactccctc 287
|||||||||||||||||||||
Sbjct: 299 ttgcatgtccataactccctc 319
>gb| AF165999.1 |AF165999 Drosophila melanogaster sodium-dependent excitatory amino acid
transporter 1 mRNA, complete cds
Length = 2704
Score = 42.1 bits (21), Expect = 1.8
Identities = 28/29 (96%), Gaps = 1/29 (3%)
Strand = Plus / Minus
Query: 212 caccagatccataagcgtagtctggggtg 240
|||||||||||||||||| ||||||||||
Sbjct: 564 caccagatccataagcgt-gtctggggtg 537
>gb| M92297.2 |STMBMANASE Streptomyces lividans mannanase (manA) gene, complete cds
Length = 1881
Score = 42.1 bits (21), Expect = 1.8
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 382 ccgtccttgccgtagccggtg 402
|||||||||||||||||||||
Sbjct: 617 ccgtccttgccgtagccggtg 597
>dbj| AB027469.1 | Drosophila melanogaster gene for glutamate transporter DGLT-1,
complete cds
Length = 8035
Score = 42.1 bits (21), Expect = 1.8
Identities = 28/29 (96%), Gaps = 1/29 (3%)
Strand = Plus / Minus
Query: 212 caccagatccataagcgtagtctggggtg 240
|||||||||||||||||| ||||||||||
Sbjct: 5164 caccagatccataagcgt-gtctggggtg 5137
>ref| XM_636926.1 | Dictyostelium discoideum hypothetical protein (DDB0204309), partial
mRNA
Length = 483
Score = 40.1 bits (20), Expect = 7.3
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 283 ccctcatcccatcctttgat 302
||||||||||||||||||||
Sbjct: 341 ccctcatcccatcctttgat 322
>gb| AC126538.1 | Homo sapiens chromosome 16 clone CTD-3225F13, complete sequence
Length = 188015
Score = 40.1 bits (20), Expect = 7.3
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 453 tctcaggatctccttctgga 472
||||||||||||||||||||
Sbjct: 106378 tctcaggatctccttctgga 106397
>gb| AC133065.3 | Homo sapiens chromosome 16 clone RP11-876N24, complete sequence
Length = 142215
Score = 40.1 bits (20), Expect = 7.3
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 453 tctcaggatctccttctgga 472
||||||||||||||||||||
Sbjct: 126098 tctcaggatctccttctgga 126079
>emb| AL670597.18 | Mouse DNA sequence from clone RP23-235P16 on chromosome X, complete
sequence
Length = 186284
Score = 40.1 bits (20), Expect = 7.3
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 287 catcccatcctttgatcactgaacccag 314
|||||| ||||| |||||||||||||||
Sbjct: 100593 catcccctccttggatcactgaacccag 100620
>emb| AL954741.9 | Zebrafish DNA sequence from clone CH211-255F4 in linkage group 22,
complete sequence
Length = 166560
Score = 40.1 bits (20), Expect = 7.3
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 267 ttgcatgtccataactccct 286
||||||||||||||||||||
Sbjct: 5573 ttgcatgtccataactccct 5592
>gb| AY105607.1 | Zea mays PCO107138 mRNA sequence
Length = 808
Score = 40.1 bits (20), Expect = 7.3
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 283 ccctcatcccatcctttgatcact 306
|||| |||||||||||||||||||
Sbjct: 370 ccctgatcccatcctttgatcact 347
>gb| AC007014.1 |AC007014 Homo sapiens chromosome 16 clone 66H6, complete sequence
Length = 167080
Score = 40.1 bits (20), Expect = 7.3
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 453 tctcaggatctccttctgga 472
||||||||||||||||||||
Sbjct: 163560 tctcaggatctccttctgga 163579
>dbj| AP000781.6 | Homo sapiens genomic DNA, chromosome 11 clone:RP11-872D17, complete
sequence
Length = 190251
Score = 40.1 bits (20), Expect = 7.3
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 452 ctctcaggatctccttctgg 471
||||||||||||||||||||
Sbjct: 142089 ctctcaggatctccttctgg 142070
Database: nt
Posted date: May 29, 2006 11:10 AM
Number of letters in database: 3,984,495,279
Number of sequences in database: 917,343
Database: /shigen/export/home/twatanab/db/nt/nt.01
Posted date: May 29, 2006 11:16 AM
Number of letters in database: 3,988,174,986
Number of sequences in database: 835,257
Database: /shigen/export/home/twatanab/db/nt/nt.02
Posted date: May 29, 2006 11:21 AM
Number of letters in database: 3,991,246,324
Number of sequences in database: 771,481
Database: /shigen/export/home/twatanab/db/nt/nt.03
Posted date: May 29, 2006 11:27 AM
Number of letters in database: 3,990,718,311
Number of sequences in database: 977,174
Database: /shigen/export/home/twatanab/db/nt/nt.04
Posted date: May 29, 2006 11:29 AM
Number of letters in database: 1,278,410,368
Number of sequences in database: 400,813
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,815,502
Number of Sequences: 3902068
Number of extensions: 4815502
Number of successful extensions: 83631
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 83504
Number of HSP's gapped (non-prelim): 122
length of query: 537
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 514
effective length of database: 17,143,297,704
effective search space: 8811655019856
effective search space used: 8811655019856
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)