Clone Name | rbasd22j05 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | TM9S3_HUMAN (Q9HD45) Transmembrane 9 superfamily protein member ... | 32 | 1.2 | 2 | TM9S3_MOUSE (Q9ET30) Transmembrane 9 superfamily protein member ... | 32 | 1.2 | 3 | FBX5_HUMAN (Q9UKT4) F-box only protein 5 (Early mitotic inhibito... | 29 | 7.8 | 4 | ARFR_ARATH (Q9C5W9) Auxin response factor 18 | 29 | 7.8 |
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>TM9S3_HUMAN (Q9HD45) Transmembrane 9 superfamily protein member 3 precursor| (SM-11044-binding protein) (EP70-P-iso) Length = 589 Score = 31.6 bits (70), Expect = 1.2 Identities = 14/36 (38%), Positives = 20/36 (55%) Frame = -3 Query: 492 GYTLMFXXXXXXXXXXXGYVGSTLFVRRIYRNIKCD 385 GY +F GY+G++ FVR+IY N+K D Sbjct: 554 GYMAVFSTALGIMCGAIGYMGTSAFVRKIYTNVKID 589
>TM9S3_MOUSE (Q9ET30) Transmembrane 9 superfamily protein member 3 precursor| Length = 587 Score = 31.6 bits (70), Expect = 1.2 Identities = 14/36 (38%), Positives = 20/36 (55%) Frame = -3 Query: 492 GYTLMFXXXXXXXXXXXGYVGSTLFVRRIYRNIKCD 385 GY +F GY+G++ FVR+IY N+K D Sbjct: 552 GYMAVFSTALGIMCGAIGYMGTSAFVRKIYTNVKID 587
>FBX5_HUMAN (Q9UKT4) F-box only protein 5 (Early mitotic inhibitor 1)| Length = 447 Score = 28.9 bits (63), Expect = 7.8 Identities = 16/41 (39%), Positives = 21/41 (51%) Frame = +1 Query: 112 KETKKNKNLHQALVLNS*ATTDVYTMRAAPGNK*VCKKKGC 234 K KKN++L + NS A D Y RA CK++GC Sbjct: 367 KTLKKNESLKACIRCNSPAKYDCYLQRA------TCKREGC 401
>ARFR_ARATH (Q9C5W9) Auxin response factor 18| Length = 602 Score = 28.9 bits (63), Expect = 7.8 Identities = 13/35 (37%), Positives = 20/35 (57%) Frame = +1 Query: 310 FQSNGTYMISSDTAPPPPHICSRKLITFDVSVDSP 414 + SN ++ PPPP CS +L FD++ +SP Sbjct: 421 YSSNNSF---KPETPPPPTNCSYRLFGFDLTSNSP 452 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 68,050,637 Number of Sequences: 219361 Number of extensions: 1262182 Number of successful extensions: 2947 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 2868 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2946 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3465624120 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)