ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd22j04 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009100.1| Triticum aestivum clone wkm2n.pk003.d23:fis, full insert mRNA sequence Length = 635 Score = 305 bits (154), Expect = 9e-80 Identities = 256/288 (88%), Gaps = 4/288 (1%) Strand = Plus / Minus Query: 308 cggcgctggccggcgggacggactagcagggcctcttgcagaagcacttgcgctcgacgt 367 |||||||||||||| || ||| ||||||| |||||||||||||||||||||||||| || Sbjct: 371 cggcgctggccggcagggcgg-ctagcagaccctcttgcagaagcacttgcgctcgaagt 313 Query: 368 gcggcgtgtggcactcgccgccggggaagttttcggtgcggcagacggcggcgcagttgc 427 || ||||||||||||||||| |||||||||| ||||||||||| ||| |||||||||||| Sbjct: 312 gctgcgtgtggcactcgccgtcggggaagttctcggtgcggcacacgccggcgcagttgc 253 Query: 428 tgctgctgaggcatgcacccttgaaattgtggctctgcgacacgcaatcccgcgcccccg 487 ||||||||||||| || || ||||| |||||||||||||||| ||| ||||||||| ||| Sbjct: 252 tgctgctgaggcacgcgccattgaacttgtggctctgcgacaggcagtcccgcgcctccg 193 Query: 488 ccatcttcaccctcgtcgcccccatctctgtggcgacgaggaggaccagcacgaggagga 547 || |||| | |||||||||||||||| ||||||||||||||||| |||| ||||||| Sbjct: 192 ccgtcttggtcgtcgtcgcccccatctcagtggcgacgaggaggacgagcaggaggaggg 133 Query: 548 cggacgccgccatgcgacgacgagagagcgccatcgatctgctctgct 595 |||||| |||||| ||||||||||||||||||||||||||||||| Sbjct: 132 tggacgcggccatg---cgacgagagagcgccatcgatctgctctgct 88 Score = 61.9 bits (31), Expect = 2e-06 Identities = 64/75 (85%) Strand = Plus / Minus Query: 119 acacaaatcaggcacaaacacgacgtacagccaagtaaactaccgagaccccgattggtt 178 ||||||| ||| ||||||||| |||| | ||||| ||||||||||| ||||| ||| || Sbjct: 559 acacaaagcagccacaaacactacgtgcggccaaccaaactaccgagtccccggttgatt 500 Query: 179 ttctactttattatg 193 | ||||||||||||| Sbjct: 499 tcctactttattatg 485
>gb|BT009073.1| Triticum aestivum clone wip1c.pk002.f10:fis, full insert mRNA sequence Length = 632 Score = 299 bits (151), Expect = 5e-78 Identities = 237/265 (89%), Gaps = 3/265 (1%) Strand = Plus / Minus Query: 329 actagcagggcctcttgcagaagcacttgcgctcgacgtgcggcgtgtggcactcgccgc 388 |||||||||||||||||||||||||||||||||| | |||| || |||||||||||||| Sbjct: 383 actagcagggcctcttgcagaagcacttgcgctccaagtgctgcctgtggcactcgccgt 324 Query: 389 cggggaagttttcggtgcggcagacggcggcgcagttgctgctgctgaggcatgcaccct 448 | ||||| || |||||||||||||||||||||||||||||||||||||| || ||||||| Sbjct: 323 cagggaacttctcggtgcggcagacggcggcgcagttgctgctgctgagacacgcaccct 264 Query: 449 tgaaattgtggctctgcgacacgcaatcccgcgcccccgccatcttcaccctcgtcgccc 508 |||| ||| ||||||||||| ||| ||||||||| |||||| ||| | |||||| || Sbjct: 263 tgaacttgaagctctgcgacaggcagtcccgcgcctccgccaccttggtcgtcgtcgtcc 204 Query: 509 ccatctctgtggcgacgaggaggaccagcacgaggaggacggacgccgccatgcgacgac 568 |||||||||||||||||||||||||||||| ||||||| ||||||| |||||| |||| Sbjct: 203 ccatctctgtggcgacgaggaggaccagcaggaggagggcggacgcggccatg---cgac 147 Query: 569 gagagagcgccatcgatctgctctg 593 ||||||||||||||||||||||||| Sbjct: 146 gagagagcgccatcgatctgctctg 122 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 135 aacacgacgtacagccaagtaaactaccgagaccccgattggttttctactttatta 191 |||| |||| ||||| || ||||||| ||||||||||||||||| |||||||||||| Sbjct: 591 aacaggacgcacagcgaactaaactagcgagaccccgattggttctctactttatta 535
>gb|BT008925.1| Triticum aestivum clone waw1c.pk005.e22:fis, full insert mRNA sequence Length = 662 Score = 293 bits (148), Expect = 3e-76 Identities = 234/262 (89%), Gaps = 3/262 (1%) Strand = Plus / Minus Query: 330 ctagcagggcctcttgcagaagcacttgcgctcgacgtgcggcgtgtggcactcgccgcc 389 |||||||| ||||||||||||||||||||| ||| || ||||||||||||| ||| | Sbjct: 342 ctagcaggccctcttgcagaagcacttgcgggcgaagttgtgcgtgtggcactccccgtc 283 Query: 390 ggggaagttttcggtgcggcagacggcggcgcagttgctgctgctgaggcatgcaccctt 449 ||||||||| ||||||||||||||||||||||||||||||||||||||||| || ||||| Sbjct: 282 ggggaagttctcggtgcggcagacggcggcgcagttgctgctgctgaggcaggcgccctt 223 Query: 450 gaaattgtggctctgcgacacgcaatcccgcgcccccgccatcttcaccctcgtcgcccc 509 ||| ||||||||||| |||| ||| ||||||||| | |||| ||| ||| |||||||||| Sbjct: 222 gaacttgtggctctgggacaggcagtcccgcgcctcagccagcttgaccgtcgtcgcccc 163 Query: 510 catctctgtggcgacgaggaggaccagcacgaggaggacggacgccgccatgcgacgacg 569 ||||||||||||||||||||||||||||| |||||| ||||||| |||||| ||||| Sbjct: 162 catctctgtggcgacgaggaggaccagcagcaggagggcggacgcagccatg---cgacg 106 Query: 570 agagagcgccatcgatctgctc 591 |||||||||||||||||||||| Sbjct: 105 agagagcgccatcgatctgctc 84 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Minus Query: 118 cacacaaatcaggcacaaacacgacgtacagccaagtaaactaccgagaccccgattggt 177 |||||||| ||| ||||||||||||| | || || ||||||||||||||||| ||| | Sbjct: 566 cacacaaagcagcgacaaacacgacgtgctgcgaaccaaactaccgagaccccggttgat 507 Query: 178 tttctactttatta 191 || |||||||||| Sbjct: 506 ttcgtactttatta 493
>gb|BT009231.1| Triticum aestivum clone wle1n.pk0096.f4:fis, full insert mRNA sequence Length = 637 Score = 270 bits (136), Expect = 5e-69 Identities = 231/262 (88%), Gaps = 3/262 (1%) Strand = Plus / Minus Query: 330 ctagcagggcctcttgcagaagcacttgcgctcgacgtgcggcgtgtggcactcgccgcc 389 |||||||| ||||||||||||||||||||| ||| || ||||||||||||||||| | Sbjct: 336 ctagcaggccctcttgcagaagcacttgcgggcgaagttgtgcgtgtggcactcgccgtc 277 Query: 390 ggggaagttttcggtgcggcagacggcggcgcagttgctgctgctgaggcatgcaccctt 449 ||||||||| ||||||||||||||| ||||||||||||||||||||||||| || ||||| Sbjct: 276 ggggaagttctcggtgcggcagacgccggcgcagttgctgctgctgaggcaggcgccctt 217 Query: 450 gaaattgtggctctgcgacacgcaatcccgcgcccccgccatcttcaccctcgtcgcccc 509 ||| |||||||||||||||| ||| ||||||||| ||||| |||| |||||||| ||| Sbjct: 216 gaacttgtggctctgcgacaggcagtcccgcgcctccgccgtcttggtcctcgtcgtccc 157 Query: 510 catctctgtggcgacgaggaggaccagcacgaggaggacggacgccgccatgcgacgacg 569 ||||||||||||||||||||||| ||||| |||||| |||| || |||||| ||||| Sbjct: 156 catctctgtggcgacgaggaggagcagcagcaggagggcggatgcggccatg---cgacg 100 Query: 570 agagagcgccatcgatctgctc 591 || ||||||||||||||||||| Sbjct: 99 agtgagcgccatcgatctgctc 78 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 296 gatcggacgtctcggcgctggccggc 321 |||||||||||||||||||||||||| Sbjct: 387 gatcggacgtctcggcgctggccggc 362
>gb|BT009000.1| Triticum aestivum clone wdk2c.pk015.k3:fis, full insert mRNA sequence Length = 626 Score = 248 bits (125), Expect = 2e-62 Identities = 176/192 (91%), Gaps = 2/192 (1%) Strand = Plus / Minus Query: 326 cggactagcagggcctcttgcagaagcacttgcgctcgacgtgcggcgtgtggcactcgc 385 ||||||||||| |||||| |||||||||||||||||||| |||||||||||||||||||| Sbjct: 422 cggactagcagagcctctcgcagaagcacttgcgctcgaagtgcggcgtgtggcactcgc 363 Query: 386 cgccggggaagttttcggtgcggcagacggcggcgcagttgctgctgctgaggcatgcac 445 || ||||||||| ||||||||||||||||||||||||||||||||||||||||| || | Sbjct: 362 cg--ggggaagttctcggtgcggcagacggcggcgcagttgctgctgctgaggcaggcgc 305 Query: 446 ccttgaaattgtggctctgcgacacgcaatcccgcgcccccgccatcttcaccctcgtcg 505 ||||||| |||||||||||||||||||| ||||||||| |||||| ||| | |||||| Sbjct: 304 ccttgaagttgtggctctgcgacacgcagtcccgcgcctccgccaccttggtcgtcgtcg 245 Query: 506 cccccatctctg 517 |||||||||||| Sbjct: 244 cccccatctctg 233 Score = 60.0 bits (30), Expect = 9e-06 Identities = 51/57 (89%), Gaps = 2/57 (3%) Strand = Plus / Minus Query: 135 aacacgacgtacagccaagtaaactaccgagaccccgattggttttctactttatta 191 ||||| |||||||||||| |||||| |||||||||||||| ||||| ||||||||| Sbjct: 610 aacaccacgtacagccaactaaact--cgagaccccgattgattttccactttatta 556 Score = 60.0 bits (30), Expect = 9e-06 Identities = 68/80 (85%), Gaps = 3/80 (3%) Strand = Plus / Minus Query: 514 tctgtggcgacgaggaggaccagcacgaggaggacggacgccgccatgcgacgacgagag 573 |||||||| || ||||||||||||| ||||||| |||| | ||| || ||||||||| Sbjct: 150 tctgtggccacaaggaggaccagcaggaggagggcggaaggggccctg---cgacgagag 94 Query: 574 agcgccatcgatctgctctg 593 |||||||||| ||||||||| Sbjct: 93 agcgccatcggtctgctctg 74
>gb|BT009007.1| Triticum aestivum clone wdk2c.pk019.h18:fis, full insert mRNA sequence Length = 681 Score = 228 bits (115), Expect = 2e-56 Identities = 225/261 (86%), Gaps = 3/261 (1%) Strand = Plus / Minus Query: 330 ctagcagggcctcttgcagaagcacttgcgctcgacgtgcggcgtgtggcactcgccgcc 389 ||||||| |||||||||||||||||||||||||| |||| ||||||||||||||||||| Sbjct: 331 ctagcagaccctcttgcagaagcacttgcgctcgaagtgctgcgtgtggcactcgccgcc 272 Query: 390 ggggaagttttcggtgcggcagacggcggcgcagttgctgctgctgaggcatgcaccctt 449 ||||||| | |||||| |||||||| ||||||||||||||||||||||||| || ||||| Sbjct: 271 ggggaagctctcggtgtggcagacgccggcgcagttgctgctgctgaggcaggcgccctt 212 Query: 450 gaaattgtggctctgcgacacgcaatcccgcgcccccgccatcttcaccctcgtcgcccc 509 ||| ||||| |||||||||| ||| ||||||||| |||||| ||| | |||||| ||| Sbjct: 211 gaagttgtgactctgcgacaggcagtcccgcgcctccgccagcttggtcgtcgtcgtccc 152 Query: 510 catctctgtggcgacgaggaggaccagcacgaggaggacggacgccgccatgcgacgacg 569 |||||||||||| |||||||| || || | |||||| |||| || || || ||||| Sbjct: 151 catctctgtggccacgaggagcacgagaagcaggagggcggatgcggc---gctgcgacg 95 Query: 570 agagagcgccatcgatctgct 590 ||||||||||||||| ||||| Sbjct: 94 agagagcgccatcgagctgct 74 Score = 117 bits (59), Expect = 4e-23 Identities = 87/95 (91%), Gaps = 1/95 (1%) Strand = Plus / Minus Query: 98 ccatatttataacaccaccacacacaaatcaggcacaaacacgacgtacagccaagtaaa 157 ||||||||| ||| |||||||||||||||||||||||||| | |||||||| || |||| Sbjct: 603 ccatatttagtacatcaccacacacaaatcaggcacaaacagg-cgtacagcgaactaaa 545 Query: 158 ctaccgagaccccgattggttttctactttattat 192 | ||||||||||||||||||||||||||||||||| Sbjct: 544 caaccgagaccccgattggttttctactttattat 510 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 296 gatcggacgtctcggcgctggccggc 321 |||||||||||||||||||||||||| Sbjct: 382 gatcggacgtctcggcgctggccggc 357 Score = 44.1 bits (22), Expect = 0.52 Identities = 37/42 (88%) Strand = Plus / Minus Query: 212 acacaccgacgaacagaacatagctagttaacggcacggatg 253 |||||| ||||||||||||| | ||| |||||||||||||| Sbjct: 486 acacacggacgaacagaacaaaagtagctaacggcacggatg 445
>dbj|AB089942.1| Triticum aestivum Tad1 mRNA for defensin, complete cds Length = 682 Score = 165 bits (83), Expect = 2e-37 Identities = 172/202 (85%), Gaps = 6/202 (2%) Strand = Plus / Minus Query: 331 tagcagggcctcttgcagaagcacttgcgctcgacgtgcggcgtgtggcactcgccgccg 390 ||||||| || ||||||| ||||||||||||||||| | |||||| |||||||||| || Sbjct: 347 tagcaggtccgcttgcagtagcacttgcgctcgacgaggtgcgtgttgcactcgccgtcg 288 Query: 391 gggaagttttcggtgcggcagacggcggcgcagttgctgctgctgaggcatgcacccttg 450 |||||||| ||||||||||| |||||||||||||||||| |||||||||| | |||||| Sbjct: 287 gggaagttctcggtgcggcacacggcggcgcagttgctgttgctgaggcaggtgcccttg 228 Query: 451 aaattgtggctctgcgacacgcaatcccgcgcccccgccatcttcaccctcgtcgccccc 510 || |||||||||||||||| ||| ||| ||| ||||| |||||| ||| |||| Sbjct: 227 aacttgtggctctgcgacaggcacgtccgggcctccgccgtcttca------tcgtcccc 174 Query: 511 atctctgtggcgacgaggagga 532 ||||||||||||||||| |||| Sbjct: 173 atctctgtggcgacgagcagga 152
>gb|BT009107.1| Triticum aestivum clone wkm2n.pk009.f17:fis, full insert mRNA sequence Length = 629 Score = 149 bits (75), Expect = 1e-32 Identities = 173/206 (83%), Gaps = 6/206 (2%) Strand = Plus / Minus Query: 342 cttgcagaagcacttgcgctcgacgtgcggcgtgtggcactcgccgccggggaagttttc 401 ||||||||||||||||||||||| | | | | || |||||||||| |||||||||| || Sbjct: 347 cttgcagaagcacttgcgctcgaggcggtgggagttgcactcgccgtcggggaagttctc 288 Query: 402 ggtgcggcagacggcggcgcagttgctgctgctgaggcatgcacccttgaaattgtggct 461 ||||||||| ||| |||||||||||||| |||||||||| | |||||||| |||||||| Sbjct: 287 ggtgcggcacacgccggcgcagttgctgttgctgaggcaggtgcccttgaacttgtggct 228 Query: 462 ctgcgacacgcaatcccgcgcccccgccatcttcaccctcgtcgcccccatctctgtggc 521 |||||||| ||| ||| ||| ||||| |||||| ||| ||||||||| ||||| Sbjct: 227 ctgcgacaggcacgtccgggcctccgccgtcttca------tcgtccccatctccgtggc 174 Query: 522 gacgaggaggaccagcacgaggagga 547 ||||||||||| ||| |||||||||| Sbjct: 173 gacgaggaggagcaggacgaggagga 148
>gb|BT009554.1| Triticum aestivum clone wre1.pk0001.d8:fis, full insert mRNA sequence Length = 631 Score = 125 bits (63), Expect = 2e-25 Identities = 120/139 (86%) Strand = Plus / Minus Query: 331 tagcagggcctcttgcagaagcacttgcgctcgacgtgcggcgtgtggcactcgccgccg 390 ||||||| || ||||||||||||||||||||||| | | | | || |||||||||| || Sbjct: 304 tagcaggtccgcttgcagaagcacttgcgctcgaggcggtgggagttgcactcgccgtcg 245 Query: 391 gggaagttttcggtgcggcagacggcggcgcagttgctgctgctgaggcatgcacccttg 450 |||||||| ||||||||||| ||| |||||||||||||| ||||||||| | |||||| Sbjct: 244 gggaagttctcggtgcggcacacgccggcgcagttgctgtcgctgaggcaggtgcccttg 185 Query: 451 aaattgtggctctgcgaca 469 || |||||||||||||||| Sbjct: 184 aacttgtggctctgcgaca 166 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Minus Query: 502 gtcgcccccatctctgtggcgacgaggaggaccagcacgaggaggacgg 550 |||| |||||||||||||||||| || |||| ||| | ||||||||||| Sbjct: 139 gtcgtccccatctctgtggcgacaagcaggagcaggaggaggaggacgg 91
>gb|BT009066.1| Triticum aestivum clone wem1c.pk001.k1:fis, full insert mRNA sequence Length = 635 Score = 125 bits (63), Expect = 2e-25 Identities = 170/206 (82%), Gaps = 6/206 (2%) Strand = Plus / Minus Query: 345 gcagaagcacttgcgctcgacgtgcggcgtgtggcactcgccgccggggaagttttcggt 404 |||| ||||||||||||||||||| |||||| ||||| ||||| ||| ||||| ||||| Sbjct: 388 gcagtagcacttgcgctcgacgtggtgcgtgttgcactggccgcggggaaagttctcggt 329 Query: 405 gcggcagacggcggcgcagttgctgctgctgaggcatgcacccttgaaattgtggctctg 464 |||||| |||| |||||||||||| ||||| ||| | |||||||| ||||||||||| Sbjct: 328 gcggcacacggttgcgcagttgctgtcgctgaagcaggggcccttgaacttgtggctctg 269 Query: 465 cgacacgcaatcccgcgcccccgccatcttcaccctcgtcgcccccatctctgtggcgac 524 |||| |||| ||| ||| |||| ||| |||||| |||||||||||||||||| Sbjct: 268 cgactcgcacgtccgggcctccgcggtct------tcgtcgtccccatctctgtggcgac 215 Query: 525 gaggaggaccagcacgaggaggacgg 550 |||||||| ||| | ||||||||||| Sbjct: 214 gaggaggagcaggatgaggaggacgg 189
>gb|BT008931.1| Triticum aestivum clone wde2f.pk001.g2:fis, full insert mRNA sequence Length = 557 Score = 109 bits (55), Expect = 1e-20 Identities = 165/202 (81%), Gaps = 6/202 (2%) Strand = Plus / Minus Query: 345 gcagaagcacttgcgctcgacgtgcggcgtgtggcactcgccgccggggaagttttcggt 404 |||| ||||||||||||||| ||| || |||||||| |||| ||||||||| ||||| Sbjct: 281 gcagtagcacttgcgctcgaggtggtgctggtggcactgcccgcgggggaagttctcggt 222 Query: 405 gcggcagacggcggcgcagttgctgctgctgaggcatgcacccttgaaattgtggctctg 464 |||||| ||| |||||||||| || ||||| ||| || |||||||||||||||||||| Sbjct: 221 gcggcacacgctggcgcagttggtgtcgctgaagcaagcgcccttgaaattgtggctctg 162 Query: 465 cgacacgcaatcccgcgcccccgccatcttcaccctcgtcgcccccatctctgtggcgac 524 |||| |||| ||| ||| |||| |||| |||||| ||||||||| |||||||| Sbjct: 161 cgactcgcacgtccgggcctccgc------caccttcgtcgtccccatctccgtggcgac 108 Query: 525 gaggaggaccagcacgaggagg 546 |||||||| ||| | ||||||| Sbjct: 107 gaggaggagcaggatgaggagg 86
>ref|XM_466875.1| Oryza sativa (japonica cultivar-group), mRNA Length = 603 Score = 71.9 bits (36), Expect = 2e-09 Identities = 179/227 (78%), Gaps = 6/227 (2%) Strand = Plus / Minus Query: 341 tcttgcagaagcacttgcgctcgacgtgcggcgtgtggcactcgccgccggggaagtttt 400 |||||||||||||||||||||||| | ||| | |||||||||| |||||||| | | Sbjct: 320 tcttgcagaagcacttgcgctcgaggccgtgcgacttgcactcgccgtcggggaagctct 261 Query: 401 cggtgcggcagacggcggcgcagttgctgctgctgaggcatgcacccttgaaattgtggc 460 | || | ||| ||| |||||||||| ||||||| | ||| |||||||| |||||| Sbjct: 260 ccgtcctgcacacgttggcgcagttgttgctgctcacgcacatgcccttgaacctgtggc 201 Query: 461 tctgcgacacgcaatcccgcgcccccgccatcttcaccctcgtcgcccccatctctgtgg 520 ||||||||| ||| | || |||| |||||| ||| |||| |||||||||||||| Sbjct: 200 tctgcgacaggcagtgcctcgcctccgccaccttg------gtcgtccccatctctgtgg 147 Query: 521 cgacgaggaggaccagcacgaggaggacggacgccgccatgcgacga 567 ||||||||| | |||| | ||||| | ||||||| ||||||||||| Sbjct: 146 cgacgaggatggccaggaggaggaaggcggacgcgaccatgcgacga 100
>gb|BT009572.1| Triticum aestivum clone wre1n.pk0022.a4:fis, full insert mRNA sequence Length = 587 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Minus Query: 495 caccctcgtcgcccccatctctgtggcgacgaggaggaccagcacgaggaggacggacgc 554 ||||||||||| |||||||||||||||||||||||||| || || | |||||||||||| Sbjct: 160 caccctcgtcgtccccatctctgtggcgacgaggaggagaaggaccaagaggacggacgc 101
>dbj|AK121915.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033106C08, full insert sequence Length = 603 Score = 71.9 bits (36), Expect = 2e-09 Identities = 179/227 (78%), Gaps = 6/227 (2%) Strand = Plus / Minus Query: 341 tcttgcagaagcacttgcgctcgacgtgcggcgtgtggcactcgccgccggggaagtttt 400 |||||||||||||||||||||||| | ||| | |||||||||| |||||||| | | Sbjct: 320 tcttgcagaagcacttgcgctcgaggccgtgcgacttgcactcgccgtcggggaagctct 261 Query: 401 cggtgcggcagacggcggcgcagttgctgctgctgaggcatgcacccttgaaattgtggc 460 | || | ||| ||| |||||||||| ||||||| | ||| |||||||| |||||| Sbjct: 260 ccgtcctgcacacgttggcgcagttgttgctgctcacgcacatgcccttgaacctgtggc 201 Query: 461 tctgcgacacgcaatcccgcgcccccgccatcttcaccctcgtcgcccccatctctgtgg 520 ||||||||| ||| | || |||| |||||| ||| |||| |||||||||||||| Sbjct: 200 tctgcgacaggcagtgcctcgcctccgccaccttg------gtcgtccccatctctgtgg 147 Query: 521 cgacgaggaggaccagcacgaggaggacggacgccgccatgcgacga 567 ||||||||| | |||| | ||||| | ||||||| ||||||||||| Sbjct: 146 cgacgaggatggccaggaggaggaaggcggacgcgaccatgcgacga 100
>gb|BT009185.1| Triticum aestivum clone wl1n.pk0135.h12:fis, full insert mRNA sequence Length = 628 Score = 67.9 bits (34), Expect = 4e-08 Identities = 147/185 (79%), Gaps = 6/185 (3%) Strand = Plus / Minus Query: 379 cactcgccgccggggaagttttcggtgcggcagacggcggcgcagttgctgctgctgagg 438 |||||||||||||||||||| ||||| |||| ||| |||||||||| ||||||| | | Sbjct: 320 cactcgccgccggggaagttctcggtctggcacacgttggcgcagttgttgctgctcatg 261 Query: 439 catgcacccttgaaattgtggctctgcgacacgcaatcccgcgcccccgccatcttcacc 498 || |||||||| |||||||||||||| ||| | || |||| |||| |||| Sbjct: 260 cacaggcccttgaaccggtggctctgcgacaggcagtgcctcgcctccgc------cacc 207 Query: 499 ctcgtcgcccccatctctgtggcgacgaggaggaccagcacgaggaggacggacgccgcc 558 | |||| ||||| |||||||||||||||||||| || | || |||||||| |||||| Sbjct: 206 ttggtcgtccccagctctgtggcgacgaggaggagcatgaggacgaggacgggagccgcc 147 Query: 559 atgcg 563 ||||| Sbjct: 146 atgcg 142 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 341 tcttgcagaagcacttgcgc 360 |||||||||||||||||||| Sbjct: 358 tcttgcagaagcacttgcgc 339
>gb|AY108568.1| Zea mays PCO111219 mRNA sequence Length = 647 Score = 67.9 bits (34), Expect = 4e-08 Identities = 147/185 (79%), Gaps = 6/185 (3%) Strand = Plus / Minus Query: 379 cactcgccgccggggaagttttcggtgcggcagacggcggcgcagttgctgctgctgagg 438 |||||||||||||||||||| ||||| |||| ||| |||||||||| ||||||| | | Sbjct: 331 cactcgccgccggggaagttctcggtctggcacacgttggcgcagttgttgctgctcatg 272 Query: 439 catgcacccttgaaattgtggctctgcgacacgcaatcccgcgcccccgccatcttcacc 498 || |||||||| |||||||||||||| ||| | || |||| |||| |||| Sbjct: 271 cacaggcccttgaaccggtggctctgcgacaggcagtgcctcgcctccgc------cacc 218 Query: 499 ctcgtcgcccccatctctgtggcgacgaggaggaccagcacgaggaggacggacgccgcc 558 | |||| ||||| |||||||||||||||||||| || | || |||||||| |||||| Sbjct: 217 ttggtcgtccccagctctgtggcgacgaggaggagcatgaggacgaggacgggagccgcc 158 Query: 559 atgcg 563 ||||| Sbjct: 157 atgcg 153 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 341 tcttgcagaagcacttgcgc 360 |||||||||||||||||||| Sbjct: 369 tcttgcagaagcacttgcgc 350
>ref|XM_473224.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 246 Score = 63.9 bits (32), Expect = 6e-07 Identities = 64/75 (85%), Gaps = 6/75 (8%) Strand = Plus / Minus Query: 455 tgtggctctgcgacacgcaatcccgcgcccccgccatcttcaccctcgtcgcccccatct 514 ||||||||||||||||||||| || |||| |||||| ||||||||| |||||||| Sbjct: 121 tgtggctctgcgacacgcaatgcctcgcctccgcca------ccctcgtcgtccccatct 68 Query: 515 ctgtggcgacgagga 529 ||| ||||||||||| Sbjct: 67 ctgaggcgacgagga 53 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 330 ctagcagggcctcttgcagaagcacttgcgctcga 364 ||||||| || |||||||||||||||||||||||| Sbjct: 246 ctagcagcgcttcttgcagaagcacttgcgctcga 212
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 330 ctagcagggcctcttgcagaagcacttgcgctcga 364 ||||||| || |||||||||||||||||||||||| Sbjct: 26094228 ctagcagcgcttcttgcagaagcacttgcgctcga 26094194 Score = 48.1 bits (24), Expect = 0.033 Identities = 33/36 (91%) Strand = Plus / Minus Query: 455 tgtggctctgcgacacgcaatcccgcgcccccgcca 490 ||||||||||||||||||||| || |||| |||||| Sbjct: 26094103 tgtggctctgcgacacgcaatgcctcgcctccgcca 26094068 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 520 gcgacgaggaggaccagcacgagg 543 ||||||||||||| |||||||||| Sbjct: 20252602 gcgacgaggaggagcagcacgagg 20252625
>emb|AL662958.3|OSJN00156 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0019D11, complete sequence Length = 163039 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 330 ctagcagggcctcttgcagaagcacttgcgctcga 364 ||||||| || |||||||||||||||||||||||| Sbjct: 128555 ctagcagcgcttcttgcagaagcacttgcgctcga 128521 Score = 48.1 bits (24), Expect = 0.033 Identities = 33/36 (91%) Strand = Plus / Minus Query: 455 tgtggctctgcgacacgcaatcccgcgcccccgcca 490 ||||||||||||||||||||| || |||| |||||| Sbjct: 128430 tgtggctctgcgacacgcaatgcctcgcctccgcca 128395
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 52.0 bits (26), Expect = 0.002 Identities = 119/150 (79%) Strand = Plus / Minus Query: 341 tcttgcagaagcacttgcgctcgacgtgcggcgtgtggcactcgccgccggggaagtttt 400 |||||||||||||||||||||||| | ||| | |||||||||| |||||||| | | Sbjct: 25209398 tcttgcagaagcacttgcgctcgaggccgtgcgacttgcactcgccgtcggggaagctct 25209339 Query: 401 cggtgcggcagacggcggcgcagttgctgctgctgaggcatgcacccttgaaattgtggc 460 | || | ||| ||| |||||||||| ||||||| | ||| |||||||| |||||| Sbjct: 25209338 ccgtcctgcacacgttggcgcagttgttgctgctcacgcacatgcccttgaacctgtggc 25209279 Query: 461 tctgcgacacgcaatcccgcgcccccgcca 490 ||||||||| ||| | || |||| |||||| Sbjct: 25209278 tctgcgacaggcagtgcctcgcctccgcca 25209249 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Minus Query: 515 ctgtggcgacgaggaggaccagcacgaggaggacggacgccgccatgcgacga 567 ||||||||||||||| | |||| | ||||| | ||||||| ||||||||||| Sbjct: 25209130 ctgtggcgacgaggatggccaggaggaggaaggcggacgcgaccatgcgacga 25209078
>dbj|AP006168.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1469H02 Length = 136602 Score = 52.0 bits (26), Expect = 0.002 Identities = 119/150 (79%) Strand = Plus / Minus Query: 341 tcttgcagaagcacttgcgctcgacgtgcggcgtgtggcactcgccgccggggaagtttt 400 |||||||||||||||||||||||| | ||| | |||||||||| |||||||| | | Sbjct: 109791 tcttgcagaagcacttgcgctcgaggccgtgcgacttgcactcgccgtcggggaagctct 109732 Query: 401 cggtgcggcagacggcggcgcagttgctgctgctgaggcatgcacccttgaaattgtggc 460 | || | ||| ||| |||||||||| ||||||| | ||| |||||||| |||||| Sbjct: 109731 ccgtcctgcacacgttggcgcagttgttgctgctcacgcacatgcccttgaacctgtggc 109672 Query: 461 tctgcgacacgcaatcccgcgcccccgcca 490 ||||||||| ||| | || |||| |||||| Sbjct: 109671 tctgcgacaggcagtgcctcgcctccgcca 109642 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Minus Query: 515 ctgtggcgacgaggaggaccagcacgaggaggacggacgccgccatgcgacga 567 ||||||||||||||| | |||| | ||||| | ||||||| ||||||||||| Sbjct: 109523 ctgtggcgacgaggatggccaggaggaggaaggcggacgcgaccatgcgacga 109471
>gb|AY109874.1| Zea mays CL5311_1 mRNA sequence Length = 685 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Plus Query: 329 actagcagggcctcttgcagaagcacttgcgc 360 ||||||| ||| |||||||||||||||||||| Sbjct: 241 actagcaaggcttcttgcagaagcacttgcgc 272
>ref|XM_864476.1| PREDICTED: Bos taurus similar to solute carrier family 2 (facilitated glucose transporter), member 13 (LOC613556), mRNA Length = 1344 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 303 cgtctcggcgctggccggcggg 324 |||||||||||||||||||||| Sbjct: 915 cgtctcggcgctggccggcggg 936
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 520 gcgacgaggaggaccagcacga 541 |||||||||||||||||||||| Sbjct: 589856 gcgacgaggaggaccagcacga 589835
>gb|BC007372.2| Homo sapiens tripartite motif-containing 52, mRNA (cDNA clone MGC:16175 IMAGE:3636274), complete cds Length = 2244 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 522 gacgaggaggaccagcacgaggagga 547 ||||||||||||||| |||||||||| Sbjct: 459 gacgaggaggaccagaacgaggagga 484
>gb|AC138792.2| Mus musculus BAC clone RP23-235I2 from chromosome 8, complete sequence Length = 181841 Score = 44.1 bits (22), Expect = 0.52 Identities = 24/25 (96%) Strand = Plus / Minus Query: 31 acacatatatatanagagagagggg 55 ||||||||||||| ||||||||||| Sbjct: 102023 acacatatatatatagagagagggg 101999
>ref|NM_182797.1| Homo sapiens phospholipase C, beta 4 (PLCB4), transcript variant 2, mRNA Length = 5509 Score = 44.1 bits (22), Expect = 0.52 Identities = 24/25 (96%) Strand = Plus / Minus Query: 30 tacacatatatatanagagagaggg 54 |||||||||||||| |||||||||| Sbjct: 4701 tacacatatatatatagagagaggg 4677
>ref|NM_032765.2| Homo sapiens tripartite motif-containing 52 (TRIM52), mRNA Length = 2244 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 522 gacgaggaggaccagcacgaggagga 547 ||||||||||||||| |||||||||| Sbjct: 459 gacgaggaggaccagaacgaggagga 484
>ref|NM_000933.2| Homo sapiens phospholipase C, beta 4 (PLCB4), transcript variant 1, mRNA Length = 5546 Score = 44.1 bits (22), Expect = 0.52 Identities = 24/25 (96%) Strand = Plus / Minus Query: 30 tacacatatatatanagagagaggg 54 |||||||||||||| |||||||||| Sbjct: 4738 tacacatatatatatagagagaggg 4714
>ref|XM_543735.2| PREDICTED: Canis familiaris similar to solute carrier family 2 (facilitated glucose transporter), member 13 (LOC486609), mRNA Length = 2523 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 303 cgtctcggcgctggccggcggg 324 |||||||||||||||||||||| Sbjct: 351 cgtctcggcgctggccggcggg 372
>gb|AC122815.3| Mus musculus BAC clone RP23-234O3 from chromosome 2, complete sequence Length = 176452 Score = 44.1 bits (22), Expect = 0.52 Identities = 24/25 (96%) Strand = Plus / Plus Query: 31 acacatatatatanagagagagggg 55 ||||||||||||| ||||||||||| Sbjct: 161771 acacatatatatagagagagagggg 161795
>gb|AF479035.1| Triticum aestivum proteinase inhibitor Rgpi9 mRNA, partial cds Length = 273 Score = 44.1 bits (22), Expect = 0.52 Identities = 43/50 (86%) Strand = Plus / Minus Query: 377 ggcactcgccgccggggaagttttcggtgcggcagacggcggcgcagttg 426 |||||| ||||||||||||| ||||| ||||||||| |||||||||| Sbjct: 229 ggcacttgccgccggggaagccctcggtccggcagacgttggcgcagttg 180
>emb|AL031652.4|HS1119D9 Human DNA sequence from clone RP5-1119D9 on chromosome 20p12 Contains the 3' end of the PAK7 gene for p21(CDKN1A)-activated kinase 7, two novel genes, the 3' end of the PLCB4 gene for phospholipase C beta 4 and two CpG islands, complete sequence Length = 148641 Score = 44.1 bits (22), Expect = 0.52 Identities = 24/25 (96%) Strand = Plus / Minus Query: 30 tacacatatatatanagagagaggg 54 |||||||||||||| |||||||||| Sbjct: 73294 tacacatatatatatagagagaggg 73270
>gb|AF067619.1| Caenorhabditis elegans cosmid K03E5, complete sequence Length = 33883 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 119 acacaaatcaggcacaaacacg 140 |||||||||||||||||||||| Sbjct: 24287 acacaaatcaggcacaaacacg 24266
>emb|CR619695.1| full-length cDNA clone CS0DF008YC23 of Fetal brain of Homo sapiens (human) Length = 1667 Score = 44.1 bits (22), Expect = 0.52 Identities = 24/25 (96%) Strand = Plus / Minus Query: 30 tacacatatatatanagagagaggg 54 |||||||||||||| |||||||||| Sbjct: 1230 tacacatatatatatagagagaggg 1206
>dbj|AK057634.1| Homo sapiens cDNA FLJ33072 fis, clone TRACH2000243 Length = 2552 Score = 44.1 bits (22), Expect = 0.52 Identities = 24/25 (96%) Strand = Plus / Minus Query: 30 tacacatatatatanagagagaggg 54 |||||||||||||| |||||||||| Sbjct: 2105 tacacatatatatatagagagaggg 2081
>emb|CR599460.1| full-length cDNA clone CS0DM008YC07 of Fetal liver of Homo sapiens (human) Length = 1727 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 522 gacgaggaggaccagcacgaggagga 547 ||||||||||||||| |||||||||| Sbjct: 422 gacgaggaggaccagaacgaggagga 447
>dbj|AK054802.1| Homo sapiens cDNA FLJ30240 fis, clone BRACE2002091, weakly similar to ZINC-FINGER PROTEIN RFP Length = 2203 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 522 gacgaggaggaccagcacgaggagga 547 ||||||||||||||| |||||||||| Sbjct: 436 gacgaggaggaccagaacgaggagga 461
>dbj|AB218878.1| Streptomyces griseus genes for AraC-type transcriptional regulator, ABC-transport system, substrate-binding extracellular domain, ABC-transport system, membrane integral subunit, ABC-transport system, membrane integral subunit, ABC-transport system, ATP-binding protein, Cytochrome P-450, type III polyketide synthase, subtilisine-like serine protease, chitinase, partial and complete cds Length = 12095 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 523 acgaggaggaccagcacgagga 544 |||||||||||||||||||||| Sbjct: 2698 acgaggaggaccagcacgagga 2677
>gb|AC096543.2| Homo sapiens chromosome 1 clone RP11-335E6, complete sequence Length = 162837 Score = 44.1 bits (22), Expect = 0.52 Identities = 24/25 (96%) Strand = Plus / Plus Query: 30 tacacatatatatanagagagaggg 54 |||||||||||||| |||||||||| Sbjct: 82130 tacacatatatatagagagagaggg 82154
>gb|AC008443.10| Homo sapiens chromosome 5 clone CTC-338M12, complete sequence Length = 120515 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 522 gacgaggaggaccagcacgaggagga 547 ||||||||||||||| |||||||||| Sbjct: 81200 gacgaggaggaccagaacgaggagga 81175
>emb|AL845160.8| Mouse DNA sequence from clone RP23-303O15 on chromosome 2, complete sequence Length = 170074 Score = 44.1 bits (22), Expect = 0.52 Identities = 24/25 (96%) Strand = Plus / Plus Query: 30 tacacatatatatanagagagaggg 54 |||||||||||||| |||||||||| Sbjct: 109509 tacacatatatatatagagagaggg 109533
>emb|AL845525.13| Mouse DNA sequence from clone RP23-298B10 on chromosome 2, complete sequence Length = 131438 Score = 44.1 bits (22), Expect = 0.52 Identities = 24/25 (96%) Strand = Plus / Minus Query: 31 acacatatatatanagagagagggg 55 ||||||||||||| ||||||||||| Sbjct: 95488 acacatatatatagagagagagggg 95464
>dbj|AB209243.1| Homo sapiens mRNA for tripartite motif-containing 52 variant protein Length = 4749 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 522 gacgaggaggaccagcacgaggagga 547 ||||||||||||||| |||||||||| Sbjct: 480 gacgaggaggaccagaacgaggagga 505
>emb|AL117633.1|HSM801170 Homo sapiens mRNA; cDNA DKFZp434E235 (from clone DKFZp434E235) Length = 1675 Score = 44.1 bits (22), Expect = 0.52 Identities = 24/25 (96%) Strand = Plus / Minus Query: 30 tacacatatatatanagagagaggg 54 |||||||||||||| |||||||||| Sbjct: 867 tacacatatatatatagagagaggg 843
>gb|AC168051.3| Mus musculus BAC clone RP23-169M5 from chromosome 8, complete sequence Length = 222981 Score = 44.1 bits (22), Expect = 0.52 Identities = 24/25 (96%) Strand = Plus / Plus Query: 33 acatatatatanagagagaggggta 57 ||||||||||| ||||||||||||| Sbjct: 104828 acatatatatatagagagaggggta 104852
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 359 gctcgacgtgcggcgtgtggc 379 ||||||||||||||||||||| Sbjct: 269633 gctcgacgtgcggcgtgtggc 269613
>gb|AC073347.3| Homo sapiens BAC clone RP11-775L16 from 7, complete sequence Length = 197144 Score = 42.1 bits (21), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 29 ttacacatatatatanagagagag 52 ||||||||||||||| |||||||| Sbjct: 71113 ttacacatatatatatagagagag 71090
>gb|AC142291.1| Pan troglodytes BAC clone RP43-184P18 from 7, complete sequence Length = 152668 Score = 42.1 bits (21), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 29 ttacacatatatatanagagagag 52 ||||||||||||||| |||||||| Sbjct: 81034 ttacacatatatatagagagagag 81011
>gb|BT009167.1| Triticum aestivum clone wl1n.pk0096.c8:fis, full insert mRNA sequence Length = 630 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 495 caccctcgtcgcccccatctctgtggcgacgag 527 ||||||||||| ||||||||||| |||| |||| Sbjct: 191 caccctcgtcgtccccatctctgaggcggcgag 159
>ref|XM_968868.1| PREDICTED: Tribolium castaneum similar to CG8591-PA (LOC662791), mRNA Length = 2040 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 485 ccgccatcttcaccctcgtcg 505 ||||||||||||||||||||| Sbjct: 545 ccgccatcttcaccctcgtcg 525
>emb|AJ009633.1|DRAJ9633 Danio rerio spermine synthase gene Length = 21001 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 176 gttttctactttattatgaga 196 ||||||||||||||||||||| Sbjct: 1985 gttttctactttattatgaga 1965
>emb|BX510938.11| Zebrafish DNA sequence from clone DKEY-92K1 in linkage group 21, complete sequence Length = 230957 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 176 gttttctactttattatgaga 196 ||||||||||||||||||||| Sbjct: 60750 gttttctactttattatgaga 60730
>emb|BX546502.7| Zebrafish DNA sequence from clone RP71-62P22 in linkage group 25, complete sequence Length = 169168 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 368 gcggcgtgtggcactcgccgc 388 ||||||||||||||||||||| Sbjct: 120300 gcggcgtgtggcactcgccgc 120320
>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome Length = 4171146 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 207 gcagaacacaccgacgaacagaaca 231 |||||| |||||||||||||||||| Sbjct: 1232817 gcagaatacaccgacgaacagaaca 1232793
>gb|AC159534.11| Medicago truncatula clone mth2-81a23, complete sequence Length = 120504 Score = 42.1 bits (21), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 35 atatatatanagagagaggggtag 58 ||||||||| |||||||||||||| Sbjct: 35822 atatatatagagagagaggggtag 35845
>gb|AC166898.17| Medicago truncatula clone mth2-70l3, complete sequence Length = 100341 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 441 tgcacccttgaaattgtggct 461 ||||||||||||||||||||| Sbjct: 50998 tgcacccttgaaattgtggct 51018
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 368 gcggcgtgtggcactcgccgc 388 ||||||||||||||||||||| Sbjct: 1267921 gcggcgtgtggcactcgccgc 1267901
>gb|AC112640.3| Homo sapiens 3 BAC RP11-817M15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 211335 Score = 42.1 bits (21), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 31 acacatatatatanagagagaggg 54 ||||||||||||| |||||||||| Sbjct: 189864 acacatatatatagagagagaggg 189841
>emb|BX294434.12| Zebrafish DNA sequence from clone CH211-236H17 in linkage group 23, complete sequence Length = 172764 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 101 tatttataacaccaccacacacaaa 125 |||||| |||||||||||||||||| Sbjct: 169778 tatttaaaacaccaccacacacaaa 169754
>gb|AC147963.2| Medicago truncatula chromosome 1 BAC clone mth2-42e19, complete sequence Length = 106951 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 441 tgcacccttgaaattgtggct 461 ||||||||||||||||||||| Sbjct: 44012 tgcacccttgaaattgtggct 44032
>emb|CR353285.1| Gallus gallus finished cDNA, clone ChEST53k20 Length = 993 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 521 cgacgaggaggaccagcacgaggaggacg 549 ||||||||||||| || |||||||||||| Sbjct: 79 cgacgaggaggacgaggacgaggaggacg 107
>gb|AC079412.5| Homo sapiens chromosome 16 clone CTD-2302M15, complete sequence Length = 104704 Score = 42.1 bits (21), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 31 acacatatatatanagagagaggg 54 ||||||||||||| |||||||||| Sbjct: 27046 acacatatatatagagagagaggg 27023
>gb|AC005859.1| Homo sapiens X BAC GSHB-324M7 (Genome Systems Human BAC Library) complete sequence Length = 202879 Score = 42.1 bits (21), Expect = 2.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 33 acatatatatanagagagaggggtagagaggt 64 ||||||||||| |||||||||| |||||||| Sbjct: 33912 acatatatatagagagagagggagagagaggt 33943
>emb|BX936113.1| Gallus gallus finished cDNA, clone ChEST485h7 Length = 948 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 521 cgacgaggaggaccagcacgaggaggacg 549 ||||||||||||| || |||||||||||| Sbjct: 56 cgacgaggaggacgaggacgaggaggacg 84
>ref|NM_213851.1| Sus scrofa p101 protein (P101), mRNA Length = 4692 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 521 cgacgaggaggaccagcacgaggaggacg 549 ||||||||||||| || |||||||||||| Sbjct: 1343 cgacgaggaggacgaggacgaggaggacg 1371
>gb|AC026412.4| Homo sapiens chromosome 5 clone CTD-2012J19, complete sequence Length = 128694 Score = 42.1 bits (21), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 35 atatatatanagagagaggggtag 58 ||||||||| |||||||||||||| Sbjct: 90894 atatatatatagagagaggggtag 90917
>gb|AF178634.1|AF178634 Helianthus annuus defensin SD2 mRNA, complete cds Length = 472 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 445 cccttgaaattgtggctctgcgacacgca 473 |||||||| ||||||||||||||| |||| Sbjct: 191 cccttgaacttgtggctctgcgactcgca 163
>gb|AF141131.1|AF141131 Helianthus annuus cultivar Line HA 401B defensin mRNA, complete cds Length = 439 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 445 cccttgaaattgtggctctgcgacacgca 473 |||||||| ||||||||||||||| |||| Sbjct: 160 cccttgaacttgtggctctgcgactcgca 132
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 523 acgaggaggaccagcacgaggagga 547 |||||||||||||| |||||||||| Sbjct: 1030270 acgaggaggaccaggacgaggagga 1030246
>gb|AY109044.1| Zea mays PCO090777 mRNA sequence Length = 796 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 495 caccctcgtcgcccccatctctgtggcgacgag 527 ||||||||||| ||||||||||| |||| |||| Sbjct: 206 caccctcgtcgtccccatctctgaggcggcgag 174
>dbj|D21250.1|CP6PSL42 Closterium peracerosum-strigosum-littorale complex mRNA for 42kDa subunit of protoplast-release-inducing protein, complete cds Length = 1202 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 525 gaggaggaccagcacgaggaggacg 549 ||||||||||||| ||||||||||| Sbjct: 158 gaggaggaccagcgcgaggaggacg 134
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 523 acgaggaggaccagcacgaggagga 547 |||||||||||||| |||||||||| Sbjct: 703246 acgaggaggaccaggacgaggagga 703222
>emb|Y10742.1|SSP101 S.scrofa mRNA for p101 protein Length = 4692 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 521 cgacgaggaggaccagcacgaggaggacg 549 ||||||||||||| || |||||||||||| Sbjct: 1343 cgacgaggaggacgaggacgaggaggacg 1371
>dbj|AB000909.1| Closterium peracerosum-strigosum-littorale complex gene for 42-kDa subunit of protoplast-release-inducing protein, complete cds Length = 4205 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 525 gaggaggaccagcacgaggaggacg 549 ||||||||||||| ||||||||||| Sbjct: 1998 gaggaggaccagcgcgaggaggacg 1974
>ref|NM_121468.2| Arabidopsis thaliana ATP binding / protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase AT5G14640 mRNA, complete cds Length = 1712 Score = 40.1 bits (20), Expect = 8.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 31 acacatatatatanagagagagg 53 ||||||||||||| ||||||||| Sbjct: 1476 acacatatatatagagagagagg 1454
>ref|XM_475851.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1110 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 518 tggcgacgaggaggaccagcacga 541 |||||||||||||| ||||||||| Sbjct: 142 tggcgacgaggagggccagcacga 119
>gb|AC135498.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0010M24, complete sequence Length = 164853 Score = 40.1 bits (20), Expect = 8.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 30 tacacatatatatanagagagag 52 |||||||||||||| |||||||| Sbjct: 94963 tacacatatatatatagagagag 94941
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 415 gcggcgcagttgctgctgct 434 |||||||||||||||||||| Sbjct: 1002579 gcggcgcagttgctgctgct 1002598
>gb|AC103406.7| Mus musculus chromosome 9, clone RP23-106O8, complete sequence Length = 174604 Score = 40.1 bits (20), Expect = 8.1 Identities = 22/23 (95%) Strand = Plus / Plus Query: 31 acacatatatatanagagagagg 53 ||||||||||||| ||||||||| Sbjct: 5883 acacatatatatagagagagagg 5905
>ref|XM_883065.1| PREDICTED: Bos taurus similar to CG1532-PA, transcript variant 3 (LOC512334), mRNA Length = 3143 Score = 40.1 bits (20), Expect = 8.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 30 tacacatatatatanagagagag 52 |||||||||||||| |||||||| Sbjct: 1574 tacacatatatatagagagagag 1552
>ref|XM_589835.2| PREDICTED: Bos taurus similar to CG1532-PA, transcript variant 1 (LOC512334), mRNA Length = 3131 Score = 40.1 bits (20), Expect = 8.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 30 tacacatatatatanagagagag 52 |||||||||||||| |||||||| Sbjct: 1562 tacacatatatatagagagagag 1540
>gb|AC123507.4| Rattus norvegicus 11 BAC CH230-18C5 (Children's Hospital Oakland Research Institute) complete sequence Length = 166073 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 522 gacgaggaggaccagcacgaggaggacg 549 |||||||||||| || |||||||||||| Sbjct: 31897 gacgaggaggacgaggacgaggaggacg 31924 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 522 gacgaggaggaccagcacgaggaggacg 549 |||||||||||| || |||||||||||| Sbjct: 31882 gacgaggaggacgaggacgaggaggacg 31909
>gb|AC135925.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0560C03, complete sequence Length = 177861 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 518 tggcgacgaggaggaccagcacga 541 |||||||||||||| ||||||||| Sbjct: 25224 tggcgacgaggagggccagcacga 25247
>gb|AC102545.9| Mus musculus chromosome 9, clone RP23-118J13, complete sequence Length = 241789 Score = 40.1 bits (20), Expect = 8.1 Identities = 25/27 (92%) Strand = Plus / Plus Query: 41 atanagagagaggggtagagaggtaga 67 ||| ||||| ||||||||||||||||| Sbjct: 92219 atagagagataggggtagagaggtaga 92245
>ref|XM_388793.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG08617.1) partial mRNA Length = 1590 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 423 gttgctgctgctgaggcatg 442 |||||||||||||||||||| Sbjct: 631 gttgctgctgctgaggcatg 612
>gb|AC132302.3| Mus musculus BAC clone RP24-279N5 from chromosome 3, complete sequence Length = 157307 Score = 40.1 bits (20), Expect = 8.1 Identities = 22/23 (95%) Strand = Plus / Plus Query: 30 tacacatatatatanagagagag 52 |||||||||||||| |||||||| Sbjct: 130409 tacacatatatatatagagagag 130431
>emb|AJ277985.1|NTA277985 Nicotiana tabacum drepp1 gene, exons 1-4 Length = 2511 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 425 tgctgctgctgaggcatgca 444 |||||||||||||||||||| Sbjct: 641 tgctgctgctgaggcatgca 660
>emb|AJ277898.1|NTA277898 Nicotiana tabacum drepp2 gene, exons 1-4 Length = 4529 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 425 tgctgctgctgaggcatgca 444 |||||||||||||||||||| Sbjct: 2416 tgctgctgctgaggcatgca 2435
>gb|AC119831.6| Mus musculus chromosome 9, clone RP23-281F13, complete sequence Length = 195918 Score = 40.1 bits (20), Expect = 8.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 31 acacatatatatanagagagagg 53 ||||||||||||| ||||||||| Sbjct: 11195 acacatatatatagagagagagg 11173
>gb|AC101527.12| Mus musculus chromosome 15, clone RP23-191D20, complete sequence Length = 193390 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 522 gacgaggaggaccagcacgaggaggacg 549 |||||||||||| || |||||||||||| Sbjct: 114408 gacgaggaggacgaggacgaggaggacg 114381
>gb|AC146107.2| Pan troglodytes BAC clone RP43-5K14 from 7, complete sequence Length = 43283 Score = 40.1 bits (20), Expect = 8.1 Identities = 22/23 (95%) Strand = Plus / Plus Query: 30 tacacatatatatanagagagag 52 |||||||||||||| |||||||| Sbjct: 5801 tacacatatatatatagagagag 5823
>gb|AC145092.1| Pan troglodytes BAC clone RP43-12J7 from 7, complete sequence Length = 78607 Score = 40.1 bits (20), Expect = 8.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 31 acacatatatatanagagagagg 53 ||||||||||||| ||||||||| Sbjct: 59583 acacatatatatagagagagagg 59561
>emb|AL603839.9| Human DNA sequence from clone RP11-656D10 on chromosome 1 Contains the gene for a novel zinc finger protein, the gene for a novel protein and three novel genes, complete sequence Length = 64478 Score = 40.1 bits (20), Expect = 8.1 Identities = 22/23 (95%) Strand = Plus / Plus Query: 29 ttacacatatatatanagagaga 51 ||||||||||||||| ||||||| Sbjct: 8734 ttacacatatatatatagagaga 8756
>emb|AL592104.6| Human DNA sequence from clone RP11-428K13 on chromosome 1 Contains a pseudogene similar to part of caspase 3 apoptosis-related cysteine protease (CASP3), complete sequence Length = 131489 Score = 40.1 bits (20), Expect = 8.1 Identities = 22/23 (95%) Strand = Plus / Plus Query: 30 tacacatatatatanagagagag 52 |||||||||||||| |||||||| Sbjct: 25001 tacacatatatatagagagagag 25023
>gb|AC116017.6| Homo sapiens chromosome 18, clone RP11-57J16, complete sequence Length = 181626 Score = 40.1 bits (20), Expect = 8.1 Identities = 22/23 (95%) Strand = Plus / Plus Query: 30 tacacatatatatanagagagag 52 |||||||||||||| |||||||| Sbjct: 123349 tacacatatatatatagagagag 123371
>emb|AL355495.10| Human DNA sequence from clone RP11-53N12 on chromosome 10, complete sequence Length = 166118 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 426 gctgctgctgaggcatgcac 445 |||||||||||||||||||| Sbjct: 157413 gctgctgctgaggcatgcac 157394
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 418 gcgcagttgctgctgctgag 437 |||||||||||||||||||| Sbjct: 125111 gcgcagttgctgctgctgag 125130
>emb|AL136230.9| Human DNA sequence from clone RP1-95I21 on chromosome 6, complete sequence Length = 120515 Score = 40.1 bits (20), Expect = 8.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 30 tacacatatatatanagagagag 52 |||||||||||||| |||||||| Sbjct: 55333 tacacatatatatagagagagag 55311
>gb|AC126365.5| Homo sapiens chromosome 17, clone RP11-283C24, complete sequence Length = 194265 Score = 40.1 bits (20), Expect = 8.1 Identities = 22/23 (95%) Strand = Plus / Plus Query: 31 acacatatatatanagagagagg 53 ||||||||||||| ||||||||| Sbjct: 19965 acacatatatatatagagagagg 19987
>gb|AC130725.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0494H05, complete sequence Length = 141715 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 518 tggcgacgaggaggaccagcacga 541 |||||||||||||| ||||||||| Sbjct: 100409 tggcgacgaggagggccagcacga 100432
>gb|AC087499.12| Homo sapiens chromosome 17, clone RP11-218E15, complete sequence Length = 195591 Score = 40.1 bits (20), Expect = 8.1 Identities = 22/23 (95%) Strand = Plus / Plus Query: 31 acacatatatatanagagagagg 53 ||||||||||||| ||||||||| Sbjct: 85476 acacatatatatatagagagagg 85498
>emb|BX842574.1| Mycobacterium tuberculosis H37Rv complete genome; segment 3/13 Length = 349564 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 415 gcggcgcagttgctgctgct 434 |||||||||||||||||||| Sbjct: 318294 gcggcgcagttgctgctgct 318313
>emb|BX294136.1| Pirellula sp. strain 1 complete genome; segment 4/24 Length = 259950 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 gacgcgtcgatcggacgtct 307 |||||||||||||||||||| Sbjct: 17487 gacgcgtcgatcggacgtct 17506
>emb|BX248337.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 4/14 Length = 327650 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 415 gcggcgcagttgctgctgct 434 |||||||||||||||||||| Sbjct: 16032 gcggcgcagttgctgctgct 16051
>emb|AL939113.1|SCO939113 Streptomyces coelicolor A3(2) complete genome; segment 10/29 Length = 310550 Score = 40.1 bits (20), Expect = 8.1 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 402 ggtgcggcagacggcggcgcagttgctg 429 |||||||||||||||||| ||||||||| Sbjct: 16676 ggtgcggcagacggcggc-cagttgctg 16702
>emb|AL163792.1|ATT15N1 Arabidopsis thaliana DNA chromosome 5, BAC clone T15N1 (ESSA project) Length = 86574 Score = 40.1 bits (20), Expect = 8.1 Identities = 22/23 (95%) Strand = Plus / Plus Query: 31 acacatatatatanagagagagg 53 ||||||||||||| ||||||||| Sbjct: 56240 acacatatatatagagagagagg 56262
>emb|AL645823.12| Mouse DNA sequence from clone RP23-288I22 on chromosome 11 Contains the Gabra6 gene for subunit alpha 6 gamma-aminobutyric acid (GABA-A) receptor, complete sequence Length = 132024 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 522 gacgaggaggaccagcacgaggaggacg 549 |||||||||||| || |||||||||||| Sbjct: 23115 gacgaggaggacaaggacgaggaggacg 23142
>emb|AL954382.3| Mouse DNA sequence from clone RP23-214G6 on chromosome 4, complete sequence Length = 109456 Score = 40.1 bits (20), Expect = 8.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 30 tacacatatatatanagagagag 52 |||||||||||||| |||||||| Sbjct: 16579 tacacatatatatatagagagag 16557
>gb|AC136492.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0554F08, complete sequence Length = 166218 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 518 tggcgacgaggaggaccagcacga 541 |||||||||||||| ||||||||| Sbjct: 124912 tggcgacgaggagggccagcacga 124935
>gb|AC108360.3| Homo sapiens 12q BAC RP11-29C9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 157546 Score = 40.1 bits (20), Expect = 8.1 Identities = 22/23 (95%) Strand = Plus / Plus Query: 30 tacacatatatatanagagagag 52 |||||||||||||| |||||||| Sbjct: 70056 tacacatatatatatagagagag 70078
>emb|CR605357.1| full-length cDNA clone CS0DF020YK03 of Fetal brain of Homo sapiens (human) Length = 1294 Score = 40.1 bits (20), Expect = 8.1 Identities = 22/23 (95%) Strand = Plus / Plus Query: 29 ttacacatatatatanagagaga 51 ||||||||||||||| ||||||| Sbjct: 654 ttacacatatatatatagagaga 676
>gb|AE012255.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 163 of 460 of the complete genome Length = 12201 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 416 cggcgcagttgctgctgctg 435 |||||||||||||||||||| Sbjct: 6113 cggcgcagttgctgctgctg 6132
>gb|AC093013.14| Homo sapiens 12 BAC RP11-158O15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 161114 Score = 40.1 bits (20), Expect = 8.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 30 tacacatatatatanagagagag 52 |||||||||||||| |||||||| Sbjct: 17774 tacacatatatatatagagagag 17752
>gb|AC027670.6| Homo sapiens chromosome 10 clone RP11-176H12, complete sequence Length = 191805 Score = 40.1 bits (20), Expect = 8.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 30 tacacatatatatanagagagag 52 |||||||||||||| |||||||| Sbjct: 35771 tacacatatatatatagagagag 35749
>gb|AC010279.5| Homo sapiens chromosome 5 clone CTC-533D18, complete sequence Length = 125746 Score = 40.1 bits (20), Expect = 8.1 Identities = 22/23 (95%) Strand = Plus / Plus Query: 30 tacacatatatatanagagagag 52 |||||||||||||| |||||||| Sbjct: 28192 tacacatatatatagagagagag 28214
>gb|AC022039.7| Homo sapiens chromosome 8, clone RP11-3G21, complete sequence Length = 176815 Score = 40.1 bits (20), Expect = 8.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 30 tacacatatatatanagagagag 52 |||||||||||||| |||||||| Sbjct: 170597 tacacatatatatagagagagag 170575
>gb|AC009872.8| Homo sapiens chromosome 8, clone RP11-108P12, complete sequence Length = 123436 Score = 40.1 bits (20), Expect = 8.1 Identities = 22/23 (95%) Strand = Plus / Plus Query: 30 tacacatatatatanagagagag 52 |||||||||||||| |||||||| Sbjct: 91194 tacacatatatatagagagagag 91216
>gb|AY065043.1| Arabidopsis thaliana AT5g14640/T15N1_130 mRNA, complete cds Length = 1712 Score = 40.1 bits (20), Expect = 8.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 31 acacatatatatanagagagagg 53 ||||||||||||| ||||||||| Sbjct: 1476 acacatatatatagagagagagg 1454
>gb|AC009898.6| Homo sapiens chromosome 8, clone RP11-138H14, complete sequence Length = 168539 Score = 40.1 bits (20), Expect = 8.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 30 tacacatatatatanagagagag 52 |||||||||||||| |||||||| Sbjct: 37517 tacacatatatatagagagagag 37495
>gb|AC020750.4| Homo sapiens chromosome 3 clone RP11-105H19 map 3p, complete sequence Length = 156933 Score = 40.1 bits (20), Expect = 8.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 30 tacacatatatatanagagagag 52 |||||||||||||| |||||||| Sbjct: 3497 tacacatatatatagagagagag 3475
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 416 cggcgcagttgctgctgctg 435 |||||||||||||||||||| Sbjct: 3237276 cggcgcagttgctgctgctg 3237257
>gb|AC091866.2|AC091866 Homo sapiens chromosome 5 clone CTD-2360G24, complete sequence Length = 119903 Score = 40.1 bits (20), Expect = 8.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 30 tacacatatatatanagagagag 52 |||||||||||||| |||||||| Sbjct: 52196 tacacatatatatagagagagag 52174
>gb|AC021382.6|AC021382 Homo sapiens, clone RP11-26N15, complete sequence Length = 189806 Score = 40.1 bits (20), Expect = 8.1 Identities = 22/23 (95%) Strand = Plus / Plus Query: 30 tacacatatatatanagagagag 52 |||||||||||||| |||||||| Sbjct: 10598 tacacatatatatatagagagag 10620
>gb|AC016902.4|AC016902 Homo sapiens BAC clone RP11-217B19 from 11, complete sequence Length = 184841 Score = 40.1 bits (20), Expect = 8.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 30 tacacatatatatanagagagag 52 |||||||||||||| |||||||| Sbjct: 19159 tacacatatatatacagagagag 19137
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 8.1 Identities = 22/23 (95%) Strand = Plus / Plus Query: 30 tacacatatatatanagagagag 52 |||||||||||||| |||||||| Sbjct: 18157701 tacacatatatatatagagagag 18157723
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 8.1 Identities = 22/23 (95%) Strand = Plus / Plus Query: 30 tacacatatatatanagagagag 52 |||||||||||||| |||||||| Sbjct: 9189057 tacacatatatatatagagagag 9189079
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 518 tggcgacgaggaggaccagcacga 541 |||||||||||||| ||||||||| Sbjct: 27093828 tggcgacgaggagggccagcacga 27093851
>gb|AC104689.4| Homo sapiens BAC clone RP11-158O16 from 4, complete sequence Length = 161428 Score = 40.1 bits (20), Expect = 8.1 Identities = 22/23 (95%) Strand = Plus / Plus Query: 30 tacacatatatatanagagagag 52 |||||||||||||| |||||||| Sbjct: 143654 tacacatatatatatagagagag 143676
>gb|AC027341.3|AC027341 Homo sapiens chromosome 5 clone CTD-2261B13, complete sequence Length = 106920 Score = 40.1 bits (20), Expect = 8.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 30 tacacatatatatanagagagag 52 |||||||||||||| |||||||| Sbjct: 61958 tacacatatatatagagagagag 61936
>gb|AC099522.3| Homo sapiens chromosome 5 clone RP11-79P5, complete sequence Length = 173073 Score = 40.1 bits (20), Expect = 8.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 30 tacacatatatatanagagagag 52 |||||||||||||| |||||||| Sbjct: 29139 tacacatatatatagagagagag 29117
>gb|AC083875.1|AC083875 Homo sapiens chromosome 7 clone RP11-699P13, complete sequence Length = 150913 Score = 40.1 bits (20), Expect = 8.1 Identities = 22/23 (95%) Strand = Plus / Plus Query: 30 tacacatatatatanagagagag 52 |||||||||||||| |||||||| Sbjct: 32683 tacacatatatatatagagagag 32705
>gb|AC098811.3| Papio anubis clone RP41-367L14, complete sequence Length = 182644 Score = 40.1 bits (20), Expect = 8.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 30 tacacatatatatanagagagag 52 |||||||||||||| |||||||| Sbjct: 111818 tacacatatatatatagagagag 111796
>gb|AC087557.20| Mus musculus strain C57BL/6J chromosome 9 clone rp23-184f1, complete sequence Length = 186745 Score = 40.1 bits (20), Expect = 8.1 Identities = 25/27 (92%) Strand = Plus / Plus Query: 41 atanagagagaggggtagagaggtaga 67 ||| ||||| ||||||||||||||||| Sbjct: 179379 atagagagataggggtagagaggtaga 179405
>emb|AL824704.27| Mouse DNA sequence from clone RP23-286H14 on chromosome 4, complete sequence Length = 205555 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 agcagggcctcttgcagaag 351 |||||||||||||||||||| Sbjct: 117705 agcagggcctcttgcagaag 117686
>gb|AC010329.3|AC010329 Homo sapiens chromosome 19 clone CTD-2626G11, complete sequence Length = 187607 Score = 40.1 bits (20), Expect = 8.1 Identities = 22/23 (95%) Strand = Plus / Plus Query: 30 tacacatatatatanagagagag 52 |||||||||||||| |||||||| Sbjct: 107565 tacacatatatatatagagagag 107587
>gb|AC012254.12| Homo sapiens chromosome 18, clone RP11-49K24, complete sequence Length = 126284 Score = 40.1 bits (20), Expect = 8.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 30 tacacatatatatanagagagag 52 |||||||||||||| |||||||| Sbjct: 69383 tacacatatatatatagagagag 69361
>emb|Y08608.1|NTPLASMEM N.tabacum mRNA for plasma membrane intrinsic polypeptide, 843bp Length = 843 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 425 tgctgctgctgaggcatgca 444 |||||||||||||||||||| Sbjct: 154 tgctgctgctgaggcatgca 173
>emb|Y08609.1|NTPLASMM N.tabacum mRNA for plasma membrane intrinsic polypeptide, 873bp Length = 873 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 425 tgctgctgctgaggcatgca 444 |||||||||||||||||||| Sbjct: 149 tgctgctgctgaggcatgca 168
>gb|AC004822.1|AC004822 Homo sapiens PAC clone RP1-170D19 from Xq23, complete sequence Length = 127824 Score = 40.1 bits (20), Expect = 8.1 Identities = 22/23 (95%) Strand = Plus / Plus Query: 30 tacacatatatatanagagagag 52 |||||||||||||| |||||||| Sbjct: 34721 tacacatatatatatagagagag 34743
>dbj|AP003100.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-27G22, complete sequence Length = 200276 Score = 40.1 bits (20), Expect = 8.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 30 tacacatatatatanagagagag 52 |||||||||||||| |||||||| Sbjct: 173006 tacacatatatatacagagagag 172984
>dbj|AP002496.3| Homo sapiens genomic DNA, chromosome 11q, clone:CTD-2378D21, complete sequence Length = 110702 Score = 40.1 bits (20), Expect = 8.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 30 tacacatatatatanagagagag 52 |||||||||||||| |||||||| Sbjct: 91753 tacacatatatatatagagagag 91731
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 8.1 Identities = 22/23 (95%) Strand = Plus / Plus Query: 30 tacacatatatatanagagagag 52 |||||||||||||| |||||||| Sbjct: 9260754 tacacatatatatatagagagag 9260776
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 8.1 Identities = 22/23 (95%) Strand = Plus / Plus Query: 30 tacacatatatatanagagagag 52 |||||||||||||| |||||||| Sbjct: 18084022 tacacatatatatatagagagag 18084044
>emb|BX294367.7| Mouse DNA sequence from clone RP23-472I18 on chromosome X, complete sequence Length = 47204 Score = 40.1 bits (20), Expect = 8.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 33 acatatatatanagagagagggg 55 ||||||||||| ||||||||||| Sbjct: 31898 acatatatatatagagagagggg 31876
>emb|AL845343.5|CNS08CB5 Oryza sativa chromosome 12, . BAC OSJNBa0028O09 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 155927 Score = 40.1 bits (20), Expect = 8.1 Identities = 22/23 (95%) Strand = Plus / Plus Query: 30 tacacatatatatanagagagag 52 |||||||||||||| |||||||| Sbjct: 111379 tacacatatatatatagagagag 111401
>gb|AC131686.4| Mus musculus BAC clone RP23-375H15 from 3, complete sequence Length = 179353 Score = 40.1 bits (20), Expect = 8.1 Identities = 22/23 (95%) Strand = Plus / Plus Query: 30 tacacatatatatanagagagag 52 |||||||||||||| |||||||| Sbjct: 1635 tacacatatatatatagagagag 1657
>dbj|AP005014.3| Homo sapiens genomic DNA, chromosome 11 clone:RP13-259F12, complete sequence Length = 167444 Score = 40.1 bits (20), Expect = 8.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 30 tacacatatatatanagagagag 52 |||||||||||||| |||||||| Sbjct: 13857 tacacatatatatatagagagag 13835
>gb|AC026185.4| Homo sapiens chromosome 3 clone RP11-299H13 map 3p, complete sequence Length = 154923 Score = 40.1 bits (20), Expect = 8.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 30 tacacatatatatanagagagag 52 |||||||||||||| |||||||| Sbjct: 133552 tacacatatatatagagagagag 133530
>dbj|AB023498.1| Oryza sativa mRNA for starch branching enzyme rbe4, complete cds Length = 3015 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 520 gcgacgaggaggaccagcacgagg 543 ||||||||||||| |||||||||| Sbjct: 44 gcgacgaggaggagcagcacgagg 21 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,285,137 Number of Sequences: 3902068 Number of extensions: 5285137 Number of successful extensions: 114499 Number of sequences better than 10.0: 150 Number of HSP's better than 10.0 without gapping: 150 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 113403 Number of HSP's gapped (non-prelim): 1084 length of query: 598 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 575 effective length of database: 17,143,297,704 effective search space: 9857396179800 effective search space used: 9857396179800 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
