ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd22j03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AL662995.2|OSJN00202 Oryza sativa genomic DNA, chromosome 4,... 149 1e-32
2emb|AL662955.3|OSJN00158 Oryza sativa genomic DNA, chromosome 4,... 149 1e-32
3dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 149 1e-32
4dbj|AK072677.1| Oryza sativa (japonica cultivar-group) cDNA clon... 149 1e-32
5gb|AY110793.1| Zea mays CL9336_1 mRNA sequence 111 3e-21
6ref|XM_471560.1| Oryza sativa (japonica cultivar-group), predic... 92 2e-15
7dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 78 4e-11
8dbj|AP003771.2| Oryza sativa (japonica cultivar-group) genomic D... 78 4e-11
9dbj|AK100512.1| Oryza sativa (japonica cultivar-group) cDNA clon... 78 4e-11
10dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.032
11dbj|AP005412.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.032
12gb|AY744399.1| Uncultured alpha proteobacterium EBAC2C11, comple... 44 0.50
13gb|AC122439.4| Mus musculus BAC clone RP24-222B4 from chromosome... 44 0.50
14gb|AC161454.3| Mus musculus BAC clone RP23-332F10 from chromosom... 44 0.50
15gb|AC158233.2| Mus musculus BAC clone RP23-240E15 from chromosom... 44 0.50
16dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.50
17dbj|AK100503.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.50
18gb|AE000657.1| Aquifex aeolicus VF5, complete genome 44 0.50
19gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 44 0.50
20emb|AL731884.4|CNS08C8O Oryza sativa chromosome 12, . BAC OSJNBa... 44 0.50
21emb|AL928774.3|CNS08CC4 Oryza sativa chromosome 12, . BAC OSJNBa... 44 0.50
22gb|AC157560.3| Mus musculus chromosome 15, clone RP24-270I3, com... 42 2.0
23ref|XM_414205.1| PREDICTED: Gallus gallus similar to ankyrin rep... 42 2.0
24gb|AY623113.1| Homo sapiens origin recognition complex, subunit ... 42 2.0
25gb|AC117198.3| Mus musculus BAC clone RP23-127K18 from 9, comple... 42 2.0
26gb|AC146202.3| Pan troglodytes BAC clone RP43-35A11 from 7, comp... 42 2.0
27emb|AL451126.18| Human DNA sequence from clone RP11-106G15 on ch... 42 2.0
28gb|AC114689.4| Homo sapiens chromosome 18, clone RP11-638L3, com... 42 2.0
29gb|AC099753.2| Homo sapiens chromosome 3 clone RP11-466A13, comp... 42 2.0
30gb|AC021561.8| Homo sapiens chromosome 18, clone RP11-766D3, com... 42 2.0
31gb|AC019084.9| Homo sapiens BAC clone RP11-354O2 from 7, complet... 42 2.0
32dbj|AB010072.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 42 2.0
33gb|AC016831.1|AC016831 Homo sapiens clone RP11-36B6 from 7q31, c... 42 2.0
34emb|CT025660.9| Mouse DNA sequence from clone RP24-79I19 on chro... 42 2.0
35gb|AC165963.4| Mus musculus BAC clone RP23-338N22 from chromosom... 40 7.8
36gb|AC161352.7| Mus musculus chromosome 3, clone RP23-129N8, comp... 40 7.8
37gb|AC136901.17| Mus musculus chromosome 3, clone RP24-510H14, co... 40 7.8
38gb|DP000014.1| Callithrix jacchus target 1 genomic scaffold 40 7.8
39gb|AC125735.1| Leishmania major strain Friedlin chromosome 3, co... 40 7.8
40gb|AE017346.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 7.8
41gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome 40 7.8
42gb|AC150488.2| Bos taurus BAC CH240-466B8 (Children's Hospital ... 40 7.8
43gb|AC149789.1| Pan troglodytes BAC clone CH251-56H2 from Y, comp... 40 7.8
44gb|AC146197.3| Pan troglodytes BAC clone CH251-450H3 from Y, com... 40 7.8
45gb|AC132246.2| Mus musculus BAC clone RP24-421K16 from chromosom... 40 7.8
46gb|AC079405.4| Homo sapiens BAC clone RP11-1150H5 from 7, comple... 40 7.8
47gb|BT011420.1| Drosophila melanogaster AT07459 full insert cDNA 40 7.8
48gb|AC134534.3| Mus musculus BAC clone RP24-562E3 from chromosome... 40 7.8
49ref|XM_571479.1| Cryptococcus neoformans var. neoformans JEC21 h... 40 7.8
50gb|AC129194.3| Mus musculus BAC clone RP24-147H7 from chromosome... 40 7.8
51gb|AC127423.4| Mus musculus BAC clone RP24-487D5 from chromosome... 40 7.8
52gb|AC145983.2| Pan troglodytes BAC clone RP43-17E6 from 7, compl... 40 7.8
53gb|AC146290.1| Pan troglodytes BAC clone CH251-549P23 from Y, co... 40 7.8
54emb|AL355595.10| Human DNA sequence from clone RP11-276G3 on chr... 40 7.8
55gb|AC146674.3| Callithrix jacchus clone CH259-338M13, complete s... 40 7.8
56emb|CR847868.9| Zebrafish DNA sequence from clone DKEYP-99G4 in ... 40 7.8
57dbj|BS000590.1| Pan troglodytes chromosome Y clone:PTB-194A24, c... 40 7.8
58dbj|BA000038.2| Vibrio vulnificus YJ016 DNA, chromosome II, comp... 40 7.8
59gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence 40 7.8
60gb|AY118680.1| Drosophila melanogaster AT10348 full insert cDNA 40 7.8
61gb|CP000133.1| Rhizobium etli CFN 42, complete genome 40 7.8
62ref|NM_169941.1| Drosophila melanogaster Na/Ca-exchange protein ... 40 7.8
63ref|NM_169940.1| Drosophila melanogaster Na/Ca-exchange protein ... 40 7.8
64ref|NM_079699.2| Drosophila melanogaster Na/Ca-exchange protein ... 40 7.8
65gb|AC091039.7| Homo sapiens chromosome 18, clone RP11-403A5, com... 40 7.8
66gb|AC154875.8| Mus musculus chromosome 3, clone RP23-14O16, comp... 40 7.8
67gb|AC016572.6| Homo sapiens chromosome 5 clone CTB-22L19, comple... 40 7.8
68gb|AF284035.1|AF284035 Melanogrammus aeglefinus vitellogenin A (... 40 7.8
69gb|AC009077.7|AC009077 Homo sapiens chromosome 16 clone RP11-331... 40 7.8
70ref|XM_624313.1| PREDICTED: Apis mellifera similar to GA19045-PA... 40 7.8
71dbj|AB210446.1| Ciona intestinalis mRNA for transcription factor... 40 7.8
72gb|AC009348.6|AC009348 Drosophila melanogaster, chromosome 3R, r... 40 7.8
73gb|AC022413.4|AC022413 Homo sapiens chromosome 5 clone CTC-205M6... 40 7.8
74gb|AC009229.5| Homo sapiens BAC clone RP11-314C9 from 2, complet... 40 7.8
75gb|AC130462.3| Homo sapiens chromosome 16 clone CTA-67A1, comple... 40 7.8
76gb|AC010726.4|AC010726 Homo sapiens BAC clone RP11-224C16 from Y... 40 7.8
77gb|AC092925.8| Homo sapiens 3 BAC RP11-78O22 (Roswell Park Cance... 40 7.8
78gb|AC068205.25| Homo sapiens chromosome 11, clone RP11-472I20, c... 40 7.8
79gb|AC117497.3| Homo sapiens 12 BAC RP11-422O21 (Roswell Park Can... 40 7.8
80gb|AC124804.10| Homo sapiens chromosome 17, clone RP11-449L23, c... 40 7.8
81gb|AC133647.3| Mus musculus BAC clone RP23-287D22 from chromosom... 40 7.8
82gb|M74895.1|SMFPOLORF Simian foamy virus type 3, gag polyprotein... 40 7.8
83dbj|AP004255.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.8
84dbj|AP004178.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.8
85emb|AM055942.1| Toxoplasma gondii, strain RH, genomic DNA chromo... 40 7.8
86gb|AC150271.4| Mus musculus BAC clone RP23-289F8 from 7, complet... 40 7.8
87gb|AE003733.3| Drosophila melanogaster chromosome 3R, section 71... 40 7.8
88gb|AE016796.1| Vibrio vulnificus CMCP6 chromosome II, complete s... 40 7.8
89gb|AC149869.2| Mus musculus BAC clone RP23-3E12 from 7, complete... 40 7.8
90gb|AC123862.5| Mus musculus BAC clone RP23-356A24 from 16, compl... 40 7.8
91gb|AF009897.1|AF009897 Drosophila melanogaster 3Na(+)-1Ca(2+) ex... 40 7.8
92emb|AL117209.7|CNS01DRH Human chromosome 14 DNA sequence BAC R-3... 40 7.8
93gb|L13448.1|MUSGSTM101 Mouse glutathione transferase mu (GSTM1) ... 40 7.8
94gb|AC104451.2| Homo sapiens chromosome 3 clone RP11-632N2, compl... 40 7.8
95emb|AL671877.15| Mouse DNA sequence from clone RP23-214E3 on chr... 40 7.8 
>emb|AL662995.2|OSJN00202 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0032D24,
            complete sequence
          Length = 132465

 Score =  149 bits (75), Expect = 1e-32
 Identities = 123/139 (88%)
 Strand = Plus / Plus

                                                                        
Query: 201  aggctgagcactactccttgaaggacatgaccgtctcgaaggcccctaccaaggccttca 260
            ||||||||||||| ||||||||||||||||| |||||||| || |||||||  |||||||
Sbjct: 5381 aggctgagcactattccttgaaggacatgacggtctcgaacgcgcctaccagagccttca 5440

                                                                        
Query: 261  ccctgctcttcctctcctccaggagcttgcttttggtctcctcgatcacgtcgttgttct 320
            ||||||||||||||||||| ||||| ||||||||||| ||||| ||||| |||||| |||
Sbjct: 5441 ccctgctcttcctctcctcaaggagtttgcttttggtttcctcaatcacatcgttgctct 5500

                               
Query: 321  tgggatcatccttcctcca 339
            | || ||||| || |||||
Sbjct: 5501 tcggttcatcttttctcca 5519
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>emb|AL662955.3|OSJN00158 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0019J05,
              complete sequence
          Length = 185211

 Score =  149 bits (75), Expect = 1e-32
 Identities = 123/139 (88%)
 Strand = Plus / Plus

                                                                          
Query: 201    aggctgagcactactccttgaaggacatgaccgtctcgaaggcccctaccaaggccttca 260
              ||||||||||||| ||||||||||||||||| |||||||| || |||||||  |||||||
Sbjct: 156239 aggctgagcactattccttgaaggacatgacggtctcgaacgcgcctaccagagccttca 156298

                                                                          
Query: 261    ccctgctcttcctctcctccaggagcttgcttttggtctcctcgatcacgtcgttgttct 320
              ||||||||||||||||||| ||||| ||||||||||| ||||| ||||| |||||| |||
Sbjct: 156299 ccctgctcttcctctcctcaaggagtttgcttttggtttcctcaatcacatcgttgctct 156358

                                 
Query: 321    tgggatcatccttcctcca 339
              | || ||||| || |||||
Sbjct: 156359 tcggttcatcttttctcca 156377
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  149 bits (75), Expect = 1e-32
 Identities = 123/139 (88%)
 Strand = Plus / Plus

                                                                            
Query: 201      aggctgagcactactccttgaaggacatgaccgtctcgaaggcccctaccaaggccttca 260
                ||||||||||||| ||||||||||||||||| |||||||| || |||||||  |||||||
Sbjct: 12331355 aggctgagcactattccttgaaggacatgacggtctcgaacgcgcctaccagagccttca 12331414

                                                                            
Query: 261      ccctgctcttcctctcctccaggagcttgcttttggtctcctcgatcacgtcgttgttct 320
                ||||||||||||||||||| ||||| ||||||||||| ||||| ||||| |||||| |||
Sbjct: 12331415 ccctgctcttcctctcctcaaggagtttgcttttggtttcctcaatcacatcgttgctct 12331474

                                   
Query: 321      tgggatcatccttcctcca 339
                | || ||||| || |||||
Sbjct: 12331475 tcggttcatcttttctcca 12331493
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>dbj|AK072677.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023136A15, full
            insert sequence
          Length = 1549

 Score =  149 bits (75), Expect = 1e-32
 Identities = 123/139 (88%)
 Strand = Plus / Minus

                                                                        
Query: 201  aggctgagcactactccttgaaggacatgaccgtctcgaaggcccctaccaaggccttca 260
            ||||||||||||| ||||||||||||||||| |||||||| || |||||||  |||||||
Sbjct: 1325 aggctgagcactattccttgaaggacatgacggtctcgaacgcgcctaccagagccttca 1266

                                                                        
Query: 261  ccctgctcttcctctcctccaggagcttgcttttggtctcctcgatcacgtcgttgttct 320
            ||||||||||||||||||| ||||| ||||||||||| ||||| ||||| |||||| |||
Sbjct: 1265 ccctgctcttcctctcctcaaggagtttgcttttggtttcctcaatcacatcgttgctct 1206

                               
Query: 321  tgggatcatccttcctcca 339
            | || ||||| || |||||
Sbjct: 1205 tcggttcatcttttctcca 1187
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>gb|AY110793.1| Zea mays CL9336_1 mRNA sequence
          Length = 1098

 Score =  111 bits (56), Expect = 3e-21
 Identities = 83/92 (90%)
 Strand = Plus / Plus

                                                                       
Query: 248 accaaggccttcaccctgctcttcctctcctccaggagcttgcttttggtctcctcgatc 307
           |||||||||||||||| |||||||||||||  |||||||||||||||||| ||||| |||
Sbjct: 263 accaaggccttcacccggctcttcctctccagcaggagcttgcttttggtttcctcaatc 322

                                           
Query: 308 acgtcgttgttcttgggatcatccttcctcca 339
           ||||| |||  ||| |||||||||||||||||
Sbjct: 323 acgtcattgccctttggatcatccttcctcca 354
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>ref|XM_471560.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2922

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 76/86 (88%)
 Strand = Plus / Minus

                                                                        
Query: 254  gccttcaccctgctcttcctctcctccaggagcttgcttttggtctcctcgatcacgtcg 313
            |||||||||||||||||||||||||| ||||| ||||||||||| ||||| ||||| |||
Sbjct: 1379 gccttcaccctgctcttcctctcctcaaggagtttgcttttggtttcctcaatcacatcg 1320

                                      
Query: 314  ttgttcttgggatcatccttcctcca 339
            ||| |||| || ||||| || |||||
Sbjct: 1319 ttgctcttcggttcatcttttctcca 1294
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 78/91 (85%)
 Strand = Plus / Minus

                                                                            
Query: 226      catgaccgtctcgaaggcccctaccaaggccttcaccctgctcttcctctcctccaggag 285
                ||||||||||||||| ||||| ||||  ||||||||| |||||||||||| |  ||  ||
Sbjct: 28687689 catgaccgtctcgaacgccccaaccagcgccttcaccttgctcttcctcttcatcatcag 28687630

                                               
Query: 286      cttgcttttggtctcctcgatcacgtcgttg 316
                | | || ||||||||||||||||||||||||
Sbjct: 28687629 cgtcctcttggtctcctcgatcacgtcgttg 28687599
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>dbj|AP003771.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0622F03
          Length = 170064

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 78/91 (85%)
 Strand = Plus / Minus

                                                                         
Query: 226   catgaccgtctcgaaggcccctaccaaggccttcaccctgctcttcctctcctccaggag 285
             ||||||||||||||| ||||| ||||  ||||||||| |||||||||||| |  ||  ||
Sbjct: 88255 catgaccgtctcgaacgccccaaccagcgccttcaccttgctcttcctcttcatcatcag 88196

                                            
Query: 286   cttgcttttggtctcctcgatcacgtcgttg 316
             | | || ||||||||||||||||||||||||
Sbjct: 88195 cgtcctcttggtctcctcgatcacgtcgttg 88165
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>dbj|AK100512.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099O06, full
            insert sequence
          Length = 2301

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 78/91 (85%)
 Strand = Plus / Minus

                                                                        
Query: 226  catgaccgtctcgaaggcccctaccaaggccttcaccctgctcttcctctcctccaggag 285
            ||||||||||||||| ||||| ||||  ||||||||| |||||||||||| |  ||  ||
Sbjct: 1886 catgaccgtctcgaacgccccaaccagcgccttcaccttgctcttcctcttcatcatcag 1827

                                           
Query: 286  cttgcttttggtctcctcgatcacgtcgttg 316
            | | || ||||||||||||||||||||||||
Sbjct: 1826 cgtcctcttggtctcctcgatcacgtcgttg 1796
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 77/94 (81%), Gaps = 3/94 (3%)
 Strand = Plus / Plus

                                                                           
Query: 226     catgaccgtctcgaaggcccctaccaaggccttcaccctgct---cttcctctcctccag 282
               |||||| ||||||||||| || || |  ||||||||||||||   || || || ||||||
Sbjct: 2772441 catgacggtctcgaaggcgccgacgagcgccttcaccctgctgcactgccgcttctccag 2772500

                                                 
Query: 283     gagcttgcttttggtctcctcgatcacgtcgttg 316
               |||||||||    | |||||||||||||||||||
Sbjct: 2772501 gagcttgctccgcgcctcctcgatcacgtcgttg 2772534



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 155      cagtacaggatgcacccagg 174
                ||||||||||||||||||||
Sbjct: 27989889 cagtacaggatgcacccagg 27989870
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>dbj|AP005412.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0050G13
          Length = 150685

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 77/94 (81%), Gaps = 3/94 (3%)
 Strand = Plus / Plus

                                                                         
Query: 226   catgaccgtctcgaaggcccctaccaaggccttcaccctgct---cttcctctcctccag 282
             |||||| ||||||||||| || || |  ||||||||||||||   || || || ||||||
Sbjct: 40669 catgacggtctcgaaggcgccgacgagcgccttcaccctgctgcactgccgcttctccag 40728

                                               
Query: 283   gagcttgcttttggtctcctcgatcacgtcgttg 316
             |||||||||    | |||||||||||||||||||
Sbjct: 40729 gagcttgctccgcgcctcctcgatcacgtcgttg 40762
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>gb|AY744399.1| Uncultured alpha proteobacterium EBAC2C11, complete sequence
          Length = 102726

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 402   tctccaccgctcgatccaattcatca 427
             |||||||||||||||||||| |||||
Sbjct: 78383 tctccaccgctcgatccaatgcatca 78358
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>gb|AC122439.4| Mus musculus BAC clone RP24-222B4 from chromosome 3, complete sequence
          Length = 159703

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 271   cctctcctccaggagcttgctt 292
             ||||||||||||||||||||||
Sbjct: 27876 cctctcctccaggagcttgctt 27897
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>gb|AC161454.3| Mus musculus BAC clone RP23-332F10 from chromosome 3, complete sequence
          Length = 228486

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 271   cctctcctccaggagcttgctt 292
             ||||||||||||||||||||||
Sbjct: 43495 cctctcctccaggagcttgctt 43516
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>gb|AC158233.2| Mus musculus BAC clone RP23-240E15 from chromosome 3, complete
           sequence
          Length = 209923

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 271 cctctcctccaggagcttgctt 292
           ||||||||||||||||||||||
Sbjct: 592 cctctcctccaggagcttgctt 571
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                          
Query: 233      gtctcgaaggcccctaccaaggccttcaccctgctcttcctc 274
                ||||||||||| || || | |||||||||| |||||||||||
Sbjct: 23962209 gtctcgaaggcgccgacgagggccttcaccttgctcttcctc 23962168
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>dbj|AK100503.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099K02, full
            insert sequence
          Length = 2226

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                      
Query: 233  gtctcgaaggcccctaccaaggccttcaccctgctcttcctc 274
            ||||||||||| || || | |||||||||| |||||||||||
Sbjct: 2115 gtctcgaaggcgccgacgagggccttcaccttgctcttcctc 2074
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>gb|AE000657.1| Aquifex aeolicus VF5, complete genome
          Length = 1551335

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 267     tcttcctctcctccaggagctt 288
               ||||||||||||||||||||||
Sbjct: 1120091 tcttcctctcctccaggagctt 1120070
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                          
Query: 233      gtctcgaaggcccctaccaaggccttcaccctgctcttcctc 274
                ||||||||||| || || | |||||||||| |||||||||||
Sbjct: 23890415 gtctcgaaggcgccgacgagggccttcaccttgctcttcctc 23890374
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>emb|AL731884.4|CNS08C8O Oryza sativa chromosome 12, . BAC OSJNBa0014A07 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 144767

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                       
Query: 233   gtctcgaaggcccctaccaaggccttcaccctgctcttcctc 274
             ||||||||||| || || | |||||||||| |||||||||||
Sbjct: 10972 gtctcgaaggcgccgacgagggccttcaccttgctcttcctc 11013
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>emb|AL928774.3|CNS08CC4 Oryza sativa chromosome 12, . BAC OSJNBa0078O17 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 176388

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                        
Query: 233    gtctcgaaggcccctaccaaggccttcaccctgctcttcctc 274
              ||||||||||| || || | |||||||||| |||||||||||
Sbjct: 125187 gtctcgaaggcgccgacgagggccttcaccttgctcttcctc 125228
to top
>gb|AC157560.3| Mus musculus chromosome 15, clone RP24-270I3, complete sequence
          Length = 157844

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 247   taccaaggccttcaccctgct 267
             |||||||||||||||||||||
Sbjct: 97347 taccaaggccttcaccctgct 97327
to top
>ref|XM_414205.1| PREDICTED: Gallus gallus similar to ankyrin repeat domain 11;
            nasopharyngeal carcinoma susceptibility protein; ankyrin
            repeat-containing protein 11 (LOC415845), mRNA
          Length = 9564

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 479  tctttctcttgctgctccttgactccctc 507
            |||||||||| || |||||||||||||||
Sbjct: 3971 tctttctctttcttctccttgactccctc 3943
to top
>gb|AY623113.1| Homo sapiens origin recognition complex, subunit 3-like (yeast) (ORC3L)
             gene, complete cds
          Length = 81082

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 347   gcagcttcacccctgttgctt 367
             |||||||||||||||||||||
Sbjct: 25708 gcagcttcacccctgttgctt 25728
to top
>gb|AC117198.3| Mus musculus BAC clone RP23-127K18 from 9, complete sequence
          Length = 193044

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 516   tgccttgttgctgagtgcaca 536
             |||||||||||||||||||||
Sbjct: 76714 tgccttgttgctgagtgcaca 76694
to top
>gb|AC146202.3| Pan troglodytes BAC clone RP43-35A11 from 7, complete sequence
          Length = 161532

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 204   ctgagcactactccttgaagg 224
             |||||||||||||||||||||
Sbjct: 82751 ctgagcactactccttgaagg 82771
to top
>emb|AL451126.18| Human DNA sequence from clone RP11-106G15 on chromosome 6 Contains the
             5' end of a gene for a novel protein similar to
             arginyl-tRNA synthetase (arginine-tRNA ligase, EC
             6.1.1.19) and the 5' end of the ORC3L gene for origin
             recognition complex, subunit 3-like (yeast), complete
             sequence
          Length = 106700

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 347   gcagcttcacccctgttgctt 367
             |||||||||||||||||||||
Sbjct: 71158 gcagcttcacccctgttgctt 71178
to top
>gb|AC114689.4| Homo sapiens chromosome 18, clone RP11-638L3, complete sequence
          Length = 177781

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 258    tcaccctgctcttcctctcct 278
              |||||||||||||||||||||
Sbjct: 115696 tcaccctgctcttcctctcct 115676
to top
>gb|AC099753.2| Homo sapiens chromosome 3 clone RP11-466A13, complete sequence
          Length = 171696

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 60     aataaagaaaaaatcaacacatgga 84
              |||||||||||||| ||||||||||
Sbjct: 115322 aataaagaaaaaataaacacatgga 115298
to top
>gb|AC021561.8| Homo sapiens chromosome 18, clone RP11-766D3, complete sequence
          Length = 174508

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 258   tcaccctgctcttcctctcct 278
             |||||||||||||||||||||
Sbjct: 87610 tcaccctgctcttcctctcct 87590
to top
>gb|AC019084.9| Homo sapiens BAC clone RP11-354O2 from 7, complete sequence
          Length = 201215

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 266   ctcttcctctcctccaggagc 286
             |||||||||||||||||||||
Sbjct: 23327 ctcttcctctcctccaggagc 23307
to top
>dbj|AB010072.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MEE6
          Length = 83698

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 53    agtccgaaataaagaaaaaat 73
             |||||||||||||||||||||
Sbjct: 56808 agtccgaaataaagaaaaaat 56828
to top
>gb|AC016831.1|AC016831 Homo sapiens clone RP11-36B6 from 7q31, complete sequence
          Length = 192768

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 505   ctcctcactcttgccttgttgctga 529
             |||||||||||||||||||| ||||
Sbjct: 45847 ctcctcactcttgccttgtttctga 45871
to top
>emb|CT025660.9| Mouse DNA sequence from clone RP24-79I19 on chromosome 9, complete
              sequence
          Length = 219226

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 516    tgccttgttgctgagtgcaca 536
              |||||||||||||||||||||
Sbjct: 188950 tgccttgttgctgagtgcaca 188970
to top
>gb|AC165963.4| Mus musculus BAC clone RP23-338N22 from chromosome 7, complete sequence
          Length = 218284

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 61    ataaagaaaaaatcaacaca 80
             ||||||||||||||||||||
Sbjct: 39115 ataaagaaaaaatcaacaca 39096
to top
>gb|AC161352.7| Mus musculus chromosome 3, clone RP23-129N8, complete sequence
          Length = 192165

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 256    cttcaccctgctcttcctct 275
              ||||||||||||||||||||
Sbjct: 134656 cttcaccctgctcttcctct 134637
to top
>gb|AC136901.17| Mus musculus chromosome 3, clone RP24-510H14, complete sequence
          Length = 129686

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 256   cttcaccctgctcttcctct 275
             ||||||||||||||||||||
Sbjct: 99805 cttcaccctgctcttcctct 99824
to top
>gb|DP000014.1| Callithrix jacchus target 1 genomic scaffold
          Length = 1952403

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 344     tgagcagcttcacccctgttgctt 367
               ||||||||||||||||||| ||||
Sbjct: 1922955 tgagcagcttcacccctgtggctt 1922932
to top
>gb|AC125735.1| Leishmania major strain Friedlin chromosome 3, complete sequence
          Length = 384518

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 477    cctctttctcttgctgctcc 496
              ||||||||||||||||||||
Sbjct: 213018 cctctttctcttgctgctcc 213037
to top
>gb|AE017346.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 6, complete
              sequence
          Length = 1438950

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 12     caacagcaacaagcagcgca 31
              ||||||||||||||||||||
Sbjct: 134747 caacagcaacaagcagcgca 134728
to top
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 468    catcggcatcctctttctcttgctgctc 495
              ||||||||||||||| || |||||||||
Sbjct: 490255 catcggcatcctcttgctgttgctgctc 490228
to top
>gb|AC150488.2| Bos taurus  BAC CH240-466B8 (Children's Hospital Oakland Research
              Institute Bovine BAC Library (male)) complete sequence
          Length = 135467

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 258    tcaccctgctcttcctctcc 277
              ||||||||||||||||||||
Sbjct: 108420 tcaccctgctcttcctctcc 108439
to top
>gb|AC149789.1| Pan troglodytes BAC clone CH251-56H2 from Y, complete sequence
          Length = 172440

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 59   aaataaagaaaaaatcaaca 78
            ||||||||||||||||||||
Sbjct: 9065 aaataaagaaaaaatcaaca 9046
to top
>gb|AC146197.3| Pan troglodytes BAC clone CH251-450H3 from Y, complete sequence
          Length = 182113

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 59     aaataaagaaaaaatcaaca 78
              ||||||||||||||||||||
Sbjct: 179810 aaataaagaaaaaatcaaca 179791
to top
>gb|AC132246.2| Mus musculus BAC clone RP24-421K16 from chromosome 7, complete sequence
          Length = 155682

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 61     ataaagaaaaaatcaacaca 80
              ||||||||||||||||||||
Sbjct: 148640 ataaagaaaaaatcaacaca 148621
to top
>gb|AC079405.4| Homo sapiens BAC clone RP11-1150H5 from 7, complete sequence
          Length = 58815

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 503   ccctcctcactcttgccttg 522
             ||||||||||||||||||||
Sbjct: 21427 ccctcctcactcttgccttg 21446
to top
>gb|BT011420.1| Drosophila melanogaster AT07459 full insert cDNA
          Length = 3747

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 9   cagcaacagcaacaagcagc 28
           ||||||||||||||||||||
Sbjct: 457 cagcaacagcaacaagcagc 476
to top
>gb|AC134534.3| Mus musculus BAC clone RP24-562E3 from chromosome 7, complete sequence
          Length = 185268

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 61     ataaagaaaaaatcaacaca 80
              ||||||||||||||||||||
Sbjct: 182682 ataaagaaaaaatcaacaca 182701
to top
>ref|XM_571479.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein
            (CNF00370) partial mRNA
          Length = 2912

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 12   caacagcaacaagcagcgca 31
            ||||||||||||||||||||
Sbjct: 1166 caacagcaacaagcagcgca 1185
to top
>gb|AC129194.3| Mus musculus BAC clone RP24-147H7 from chromosome 7, complete sequence
          Length = 124950

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 61     ataaagaaaaaatcaacaca 80
              ||||||||||||||||||||
Sbjct: 118394 ataaagaaaaaatcaacaca 118413
to top
>gb|AC127423.4| Mus musculus BAC clone RP24-487D5 from chromosome 7, complete sequence
          Length = 160293

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 61    ataaagaaaaaatcaacaca 80
             ||||||||||||||||||||
Sbjct: 55102 ataaagaaaaaatcaacaca 55121
to top
>gb|AC145983.2| Pan troglodytes BAC clone RP43-17E6 from 7, complete sequence
          Length = 167523

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 503   ccctcctcactcttgccttg 522
             ||||||||||||||||||||
Sbjct: 86246 ccctcctcactcttgccttg 86227
to top
>gb|AC146290.1| Pan troglodytes BAC clone CH251-549P23 from Y, complete sequence
          Length = 176345

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 59     aaataaagaaaaaatcaaca 78
              ||||||||||||||||||||
Sbjct: 109504 aaataaagaaaaaatcaaca 109485
to top
>emb|AL355595.10| Human DNA sequence from clone RP11-276G3 on chromosome 13 Contains a
              novel gene and a novel pseudogene, complete sequence
          Length = 119343

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 257    ttcaccctgctcttcctctcctcc 280
              |||||||| |||||||||||||||
Sbjct: 115611 ttcaccctcctcttcctctcctcc 115588
to top
>gb|AC146674.3| Callithrix jacchus clone CH259-338M13, complete sequence
          Length = 228448

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 344    tgagcagcttcacccctgttgctt 367
              ||||||||||||||||||| ||||
Sbjct: 199000 tgagcagcttcacccctgtggctt 198977
to top
>emb|CR847868.9| Zebrafish DNA sequence from clone DKEYP-99G4 in linkage group 8, complete
              sequence
          Length = 147399

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 71     aatcaacacatggaatacaa 90
              ||||||||||||||||||||
Sbjct: 123031 aatcaacacatggaatacaa 123012
to top
>dbj|BS000590.1| Pan troglodytes chromosome Y clone:PTB-194A24, complete sequence
          Length = 219969

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 59     aaataaagaaaaaatcaaca 78
              ||||||||||||||||||||
Sbjct: 128922 aaataaagaaaaaatcaaca 128903
to top
>dbj|BA000038.2| Vibrio vulnificus YJ016 DNA, chromosome II, complete sequence
          Length = 1857073

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 294    tggtctcctcgatcacgtcg 313
              ||||||||||||||||||||
Sbjct: 383987 tggtctcctcgatcacgtcg 384006
to top
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 59       aaataaagaaaaaatcaaca 78
                ||||||||||||||||||||
Sbjct: 20830078 aaataaagaaaaaatcaaca 20830097
to top
>gb|AY118680.1| Drosophila melanogaster AT10348 full insert cDNA
          Length = 3743

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 9   cagcaacagcaacaagcagc 28
           ||||||||||||||||||||
Sbjct: 460 cagcaacagcaacaagcagc 479
to top
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome
          Length = 4381608

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 363    tgcttgccagcgccgatgccttcg 386
              |||||||| |||||||||||||||
Sbjct: 677502 tgcttgcccgcgccgatgccttcg 677525
to top
>ref|NM_169941.1| Drosophila melanogaster Na/Ca-exchange protein CG5685-RC,
           transcript variant C (Calx), mRNA
          Length = 4726

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 9   cagcaacagcaacaagcagc 28
           ||||||||||||||||||||
Sbjct: 354 cagcaacagcaacaagcagc 373
to top
>ref|NM_169940.1| Drosophila melanogaster Na/Ca-exchange protein CG5685-RB,
           transcript variant B (Calx), mRNA
          Length = 4829

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 9   cagcaacagcaacaagcagc 28
           ||||||||||||||||||||
Sbjct: 457 cagcaacagcaacaagcagc 476
to top
>ref|NM_079699.2| Drosophila melanogaster Na/Ca-exchange protein CG5685-RA, transcript
            variant A (Calx), mRNA
          Length = 5390

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 9    cagcaacagcaacaagcagc 28
            ||||||||||||||||||||
Sbjct: 1018 cagcaacagcaacaagcagc 1037
to top
>gb|AC091039.7| Homo sapiens chromosome 18, clone RP11-403A5, complete sequence
          Length = 168148

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 481   tttctcttgctgctccttgactcc 504
             ||||||||| ||||||||||||||
Sbjct: 98828 tttctcttgttgctccttgactcc 98851
to top
>gb|AC154875.8| Mus musculus chromosome 3, clone RP23-14O16, complete sequence
          Length = 225841

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 245    cctaccaaggccttcaccct 264
              ||||||||||||||||||||
Sbjct: 106354 cctaccaaggccttcaccct 106335
to top
>gb|AC016572.6| Homo sapiens chromosome 5 clone CTB-22L19, complete sequence
          Length = 143687

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 493  ctccttgactccctcctcac 512
            ||||||||||||||||||||
Sbjct: 3310 ctccttgactccctcctcac 3291
to top
>gb|AF284035.1|AF284035 Melanogrammus aeglefinus vitellogenin A (VtgA) mRNA, complete cds
          Length = 5189

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 305  atcacgtcgttgttcttggg 324
            ||||||||||||||||||||
Sbjct: 4403 atcacgtcgttgttcttggg 4384
to top
>gb|AC009077.7|AC009077 Homo sapiens chromosome 16 clone RP11-331B16, complete sequence
          Length = 185167

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 316   gttcttgggatcatccttcctcca 339
             ||||||||||||||| ||||||||
Sbjct: 40073 gttcttgggatcatctttcctcca 40050
to top
>ref|XM_624313.1| PREDICTED: Apis mellifera similar to GA19045-PA (LOC551928), mRNA
          Length = 2337

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 12   caacagcaacaagcagcgca 31
            ||||||||||||||||||||
Sbjct: 991  caacagcaacaagcagcgca 1010
to top
>dbj|AB210446.1| Ciona intestinalis mRNA for transcription factor protein, complete
           cds, clone: cilv047l24
          Length = 3256

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 9   cagcaacagcaacaagcagc 28
           ||||||||||||||||||||
Sbjct: 813 cagcaacagcaacaagcagc 832
to top
>gb|AC009348.6|AC009348 Drosophila melanogaster, chromosome 3R, region 93A-93B, BAC clone
             BACR05I01, complete sequence
          Length = 187151

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 9     cagcaacagcaacaagcagc 28
             ||||||||||||||||||||
Sbjct: 90375 cagcaacagcaacaagcagc 90394
to top
>gb|AC022413.4|AC022413 Homo sapiens chromosome 5 clone CTC-205M6, complete sequence
          Length = 166525

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 493   ctccttgactccctcctcac 512
             ||||||||||||||||||||
Sbjct: 82378 ctccttgactccctcctcac 82397
to top
>gb|AC009229.5| Homo sapiens BAC clone RP11-314C9 from 2, complete sequence
          Length = 209156

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 317   ttcttgggatcatccttcct 336
             ||||||||||||||||||||
Sbjct: 60044 ttcttgggatcatccttcct 60063
to top
>gb|AC130462.3| Homo sapiens chromosome 16 clone CTA-67A1, complete sequence
          Length = 191594

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 316   gttcttgggatcatccttcctcca 339
             ||||||||||||||| ||||||||
Sbjct: 56456 gttcttgggatcatctttcctcca 56479
to top
>gb|AC010726.4|AC010726 Homo sapiens BAC clone RP11-224C16 from Y, complete sequence
          Length = 176524

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 59     aaataaagaaaaaatcaaca 78
              ||||||||||||||||||||
Sbjct: 174013 aaataaagaaaaaatcaaca 173994
to top
>gb|AC092925.8| Homo sapiens 3 BAC RP11-78O22 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 148130

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 344   tgagcagcttcacccctgttgctt 367
             ||||||||||||| ||||||||||
Sbjct: 74280 tgagcagcttcactcctgttgctt 74257
to top
>gb|AC068205.25| Homo sapiens chromosome 11, clone RP11-472I20, complete sequence
          Length = 205069

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 526   ctgagtgcacagctcctgtc 545
             ||||||||||||||||||||
Sbjct: 33439 ctgagtgcacagctcctgtc 33458
to top
>gb|AC117497.3| Homo sapiens 12 BAC RP11-422O21 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 87243

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 80    atggaatacaaatggaccaa 99
             ||||||||||||||||||||
Sbjct: 73406 atggaatacaaatggaccaa 73425
to top
>gb|AC124804.10| Homo sapiens chromosome 17, clone RP11-449L23, complete sequence
          Length = 203066

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 330    ccttcctccacgactgagca 349
              ||||||||||||||||||||
Sbjct: 110220 ccttcctccacgactgagca 110201
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>gb|AC133647.3| Mus musculus BAC clone RP23-287D22 from chromosome 7, complete sequence
          Length = 197003

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 61    ataaagaaaaaatcaacaca 80
             ||||||||||||||||||||
Sbjct: 31471 ataaagaaaaaatcaacaca 31452
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>gb|M74895.1|SMFPOLORF Simian foamy virus type 3, gag polyprotein 3' end, pol polyprotein 3'
            end, env protein 3' end, orf1 3' end, orf2 partial cds,
            and orf3 3' end
          Length = 13111

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 7    accagcaacagcaacaagca 26
            ||||||||||||||||||||
Sbjct: 3467 accagcaacagcaacaagca 3486
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>dbj|AP004255.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1212_A08
          Length = 119304

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 155   cagtacaggatgcacccagg 174
             ||||||||||||||||||||
Sbjct: 33551 cagtacaggatgcacccagg 33532
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>dbj|AP004178.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1123_G04
          Length = 124666

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 155    cagtacaggatgcacccagg 174
              ||||||||||||||||||||
Sbjct: 117341 cagtacaggatgcacccagg 117322
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>emb|AM055942.1| Toxoplasma gondii, strain RH, genomic DNA chromosome Ia
          Length = 1923819

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 252    aggccttcaccctgctcttcctct 275
              ||||||||||||||| ||||||||
Sbjct: 678509 aggccttcaccctgcgcttcctct 678532
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>gb|AC150271.4| Mus musculus BAC clone RP23-289F8 from 7, complete sequence
          Length = 202277

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 61     ataaagaaaaaatcaacaca 80
              ||||||||||||||||||||
Sbjct: 184910 ataaagaaaaaatcaacaca 184929
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>gb|AE003733.3| Drosophila melanogaster chromosome 3R, section 71 of 118 of the
             complete sequence
          Length = 235707

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 9     cagcaacagcaacaagcagc 28
             ||||||||||||||||||||
Sbjct: 14238 cagcaacagcaacaagcagc 14257
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>gb|AE016796.1| Vibrio vulnificus CMCP6 chromosome II, complete sequence
          Length = 1844853

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 294     tggtctcctcgatcacgtcg 313
               ||||||||||||||||||||
Sbjct: 1658624 tggtctcctcgatcacgtcg 1658643
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>gb|AC149869.2| Mus musculus BAC clone RP23-3E12 from 7, complete sequence
          Length = 195392

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 61    ataaagaaaaaatcaacaca 80
             ||||||||||||||||||||
Sbjct: 31508 ataaagaaaaaatcaacaca 31489
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>gb|AC123862.5| Mus musculus BAC clone RP23-356A24 from 16, complete sequence
          Length = 223030

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 345    gagcagcttcacccctgttg 364
              ||||||||||||||||||||
Sbjct: 146413 gagcagcttcacccctgttg 146432
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>gb|AF009897.1|AF009897 Drosophila melanogaster 3Na(+)-1Ca(2+) exchanger (Calx) mRNA,
            complete cds
          Length = 5408

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 9    cagcaacagcaacaagcagc 28
            ||||||||||||||||||||
Sbjct: 1022 cagcaacagcaacaagcagc 1041
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>emb|AL117209.7|CNS01DRH Human chromosome 14 DNA sequence BAC R-365N19 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 159602

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 270    tcctctcctccaggagcttgcttt 293
              |||||||| |||||||||||||||
Sbjct: 101393 tcctctcccccaggagcttgcttt 101370
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>gb|L13448.1|MUSGSTM101 Mouse glutathione transferase mu (GSTM1) gene, exons 1-5
          Length = 2408

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 84   aatacaaatggaccaaggaa 103
            ||||||||||||||||||||
Sbjct: 1256 aatacaaatggaccaaggaa 1237
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>gb|AC104451.2| Homo sapiens chromosome 3 clone RP11-632N2, complete sequence
          Length = 173103

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 208    gcactactccttgaaggaca 227
              ||||||||||||||||||||
Sbjct: 153941 gcactactccttgaaggaca 153960
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>emb|AL671877.15| Mouse DNA sequence from clone RP23-214E3 on chromosome 3, complete
              sequence
          Length = 146015

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 84     aatacaaatggaccaaggaa 103
              ||||||||||||||||||||
Sbjct: 104547 aatacaaatggaccaaggaa 104566


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,862,743
Number of Sequences: 3902068
Number of extensions: 5862743
Number of successful extensions: 150909
Number of sequences better than 10.0: 95
Number of HSP's better than 10.0 without gapping: 94
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 150145
Number of HSP's gapped (non-prelim): 758
length of query: 571
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 548
effective length of database: 17,143,297,704
effective search space: 9394527141792
effective search space used: 9394527141792
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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