ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd22i22 |
|---|---|
| Clone Library Name | barley_pub |
>ALA2_PANMI (P34106) Alanine aminotransferase 2 (EC 2.6.1.2) (GPT)| (Glutamic--pyruvic transaminase 2) (Glutamic--alanine transaminase 2) (ALAAT-2) Length = 482 Score = 49.3 bits (116), Expect = 3e-06 Identities = 21/35 (60%), Positives = 27/35 (77%) Frame = -2 Query: 143 TGISTVPGSGFGQKEGVFHLRTTILPAEEDMPAIM 39 TGI VPGSGFGQ G +H+R TILP E+ +PA++ Sbjct: 432 TGIVVVPGSGFGQVPGTWHIRCTILPQEDKIPAVI 466
>ALA2_HORVU (P52894) Alanine aminotransferase 2 (EC 2.6.1.2) (GPT)| (Glutamic--pyruvic transaminase 2) (Glutamic--alanine transaminase 2) (ALAAT-2) Length = 482 Score = 48.5 bits (114), Expect = 5e-06 Identities = 21/35 (60%), Positives = 26/35 (74%) Frame = -2 Query: 143 TGISTVPGSGFGQKEGVFHLRTTILPAEEDMPAIM 39 TGI VPGSGFGQ G +H R TILP E+ +PA++ Sbjct: 432 TGIVVVPGSGFGQVPGTWHFRCTILPQEDKIPAVI 466
>ALAT_MOUSE (Q8QZR5) Alanine aminotransferase (EC 2.6.1.2) (Glutamic--pyruvic| transaminase) (GPT) (Glutamic--alanine transaminase) Length = 495 Score = 47.0 bits (110), Expect = 1e-05 Identities = 20/35 (57%), Positives = 25/35 (71%) Frame = -2 Query: 143 TGISTVPGSGFGQKEGVFHLRTTILPAEEDMPAIM 39 TGI VPGSGFGQ+EG +H R TILP E + ++ Sbjct: 446 TGICVVPGSGFGQQEGTYHFRMTILPPMEKLRVLL 480
>ALAT_RAT (P25409) Alanine aminotransferase (EC 2.6.1.2) (Glutamic--pyruvic| transaminase) (GPT) (Glutamic--alanine transaminase) Length = 495 Score = 46.6 bits (109), Expect = 2e-05 Identities = 20/35 (57%), Positives = 25/35 (71%) Frame = -2 Query: 143 TGISTVPGSGFGQKEGVFHLRTTILPAEEDMPAIM 39 TGI VPGSGFGQ+EG +H R TILP E + ++ Sbjct: 446 TGICVVPGSGFGQQEGTYHFRMTILPPMEKLRLLL 480
>ALAT_HUMAN (P24298) Alanine aminotransferase (EC 2.6.1.2) (Glutamic--pyruvic| transaminase) (GPT) (Glutamic--alanine transaminase) Length = 495 Score = 46.6 bits (109), Expect = 2e-05 Identities = 20/35 (57%), Positives = 25/35 (71%) Frame = -2 Query: 143 TGISTVPGSGFGQKEGVFHLRTTILPAEEDMPAIM 39 TGI VPGSGFGQ+EG +H R TILP E + ++ Sbjct: 446 TGICVVPGSGFGQREGTYHFRMTILPPLEKLRLLL 480
>ALAM_YEAST (P52893) Putative alanine aminotransferase, mitochondrial precursor| (EC 2.6.1.2) (Glutamic--pyruvic transaminase) (GPT) (Glutamic--alanine transaminase) Length = 592 Score = 44.3 bits (103), Expect = 9e-05 Identities = 19/25 (76%), Positives = 21/25 (84%) Frame = -2 Query: 143 TGISTVPGSGFGQKEGVFHLRTTIL 69 TGI TVPGSGFGQ+ G +HLRTT L Sbjct: 545 TGICTVPGSGFGQEPGTYHLRTTFL 569
>ALAT_YEAST (P52892) Putative alanine aminotransferase (EC 2.6.1.2)| (Glutamic--pyruvic transaminase) (GPT) (Glutamic--alanine transaminase) Length = 507 Score = 43.5 bits (101), Expect = 2e-04 Identities = 18/25 (72%), Positives = 21/25 (84%) Frame = -2 Query: 143 TGISTVPGSGFGQKEGVFHLRTTIL 69 TGI TVPGSGFGQ+ G +H+RTT L Sbjct: 460 TGICTVPGSGFGQRPGTYHVRTTFL 484
>ALAT_SCHPO (Q10334) Putative alanine aminotransferase (EC 2.6.1.2)| (Glutamic--pyruvic transaminase) (GPT) (Glutamic--alanine transaminase) Length = 505 Score = 38.1 bits (87), Expect = 0.007 Identities = 16/25 (64%), Positives = 19/25 (76%) Frame = -2 Query: 143 TGISTVPGSGFGQKEGVFHLRTTIL 69 +GI VPGSGFGQ EG +H+R T L Sbjct: 459 SGICVVPGSGFGQPEGDYHIRITFL 483
>HAGA2_PORGI (Q51845) Hemagglutinin A precursor| Length = 2628 Score = 29.6 bits (65), Expect = 2.4 Identities = 11/27 (40%), Positives = 17/27 (62%) Frame = +1 Query: 58 SSAGRIVVLRWNTPSF*PKPEPGTVDI 138 S+ G+ V L+W+ P+ P P PGT + Sbjct: 483 SAVGQKVTLKWDAPNGTPNPNPGTTTL 509
>HAGA1_PORGI (P59915) Hemagglutinin A precursor| Length = 2164 Score = 29.6 bits (65), Expect = 2.4 Identities = 11/27 (40%), Positives = 17/27 (62%) Frame = +1 Query: 58 SSAGRIVVLRWNTPSF*PKPEPGTVDI 138 S+ G+ V L+W+ P+ P P PGT + Sbjct: 1387 SAVGQKVTLKWDAPNGTPNPNPGTTTL 1413 Score = 29.6 bits (65), Expect = 2.4 Identities = 11/27 (40%), Positives = 17/27 (62%) Frame = +1 Query: 58 SSAGRIVVLRWNTPSF*PKPEPGTVDI 138 S+ G+ V L+W+ P+ P P PGT + Sbjct: 935 SAVGQKVTLKWDAPNGTPNPNPGTTTL 961 Score = 29.6 bits (65), Expect = 2.4 Identities = 11/27 (40%), Positives = 17/27 (62%) Frame = +1 Query: 58 SSAGRIVVLRWNTPSF*PKPEPGTVDI 138 S+ G+ V L+W+ P+ P P PGT + Sbjct: 483 SAVGQKVTLKWDAPNGTPNPNPGTTTL 509 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 21,052,332 Number of Sequences: 219361 Number of extensions: 287308 Number of successful extensions: 987 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 972 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 987 length of database: 80,573,946 effective HSP length: 23 effective length of database: 75,528,643 effective search space used: 1812687432 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
