ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd22i22
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY090542.1| Deschampsia antarctica clone Dacor 1.7 alanine am... 190 8e-46
2gb|AY236227.1| Oryza sativa (indica cultivar-group) alanine amin... 149 3e-33
3dbj|AK067732.1| Oryza sativa (japonica cultivar-group) cDNA clon... 149 3e-33
4dbj|AK060835.1| Oryza sativa (japonica cultivar-group) cDNA clon... 149 3e-33
5gb|AY108756.1| Zea mays PCO087866 mRNA sequence 111 6e-22
6gb|AY109741.1| Zea mays CL1839_2 mRNA sequence 92 5e-16
7dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 90 2e-15
8dbj|AP004342.5| Oryza sativa (japonica cultivar-group) genomic D... 90 2e-15
9ref|NM_102180.2| Arabidopsis thaliana GGT1 (ALANINE-2-OXOGLUTARA... 84 1e-13
10gb|AY150373.1| Arabidopsis thaliana putative alanine aminotransf... 84 1e-13
11gb|AF360195.1| Arabidopsis thaliana putative alanine aminotransf... 84 1e-13
12gb|AY058868.1| Arabidopsis thaliana At1g23310/F26F24_4 mRNA, com... 84 1e-13
13gb|AY056379.1| Arabidopsis thaliana At1g23310/F26F24_4 mRNA, com... 84 1e-13
14gb|AY042902.1| Arabidopsis thaliana alanine aminotransferase-lik... 84 1e-13
15emb|BX816016.1|CNS0AD1E Arabidopsis thaliana Full-length cDNA Co... 84 1e-13
16emb|BX814587.1|CNS0AAUD Arabidopsis thaliana Full-length cDNA Co... 84 1e-13
17gb|AF479639.1| Arabidopsis thaliana glutamate:glyoxylate aminotr... 84 1e-13
18gb|BT002643.1| Arabidopsis thaliana At1g23310/F26F24_4 gene, com... 84 1e-13
19gb|DQ118094.1| Vitis labrusca AlaT1 mRNA, complete cds 72 5e-10
20gb|DQ118095.1| Vitis vinifera AlaT1 mRNA, complete cds 58 7e-06
21gb|AC005292.4|AC005292 Genomic sequence for Arabidopsis thaliana... 58 7e-06
22dbj|AP004918.1| Lotus japonicus genomic DNA, chromosome 2, clone... 58 7e-06
23ref|NM_001036185.1| Arabidopsis thaliana AOAT2 (ALANINE-2-OXOGLU... 54 1e-04
24ref|NM_001036186.1| Arabidopsis thaliana AOAT2 (ALANINE-2-OXOGLU... 54 1e-04
25ref|NM_105726.2| Arabidopsis thaliana AOAT2 (ALANINE-2-OXOGLUTAR... 54 1e-04
26ref|NM_202393.1| Arabidopsis thaliana AOAT2 (ALANINE-2-OXOGLUTAR... 54 1e-04
27gb|AY062982.1| Arabidopsis thaliana putative alanine aminotransf... 54 1e-04
28gb|AY035130.1| Arabidopsis thaliana putative alanine aminotransf... 54 1e-04
29gb|AY084890.1| Arabidopsis thaliana clone 120310 mRNA, complete ... 54 1e-04
30gb|AF479640.1| Arabidopsis thaliana glutamate:glyoxylate aminotr... 54 1e-04
31gb|AC126783.33| Medicago truncatula clone mth2-15k17, complete s... 50 0.002
32emb|AJ720975.1| Gallus gallus mRNA for hypothetical protein, clo... 42 0.44
33ref|NM_001006475.1| Gallus gallus enhancer of rudimentary homolo... 42 0.44
34emb|CR406877.1| Gallus gallus finished cDNA, clone ChEST930h15 42 0.44
35emb|CR388924.1| Gallus gallus finished cDNA, clone ChEST170e11 42 0.44
36gb|AC010796.7|AC010796 Arabidopsis thaliana chromosome 1 BAC F24... 42 0.44
37gb|AC011663.7|AC011663 Arabidopsis thaliana chromosome 1 BAC F5A... 42 0.44
38gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome 40 1.7
39emb|AL603907.12| Mouse DNA sequence from clone RP23-139D10 on ch... 40 1.7
40gb|AC091214.20| Homo sapiens 12q BAC RP11-13F9 (Roswell Park Can... 40 1.7
41gb|AE015451.1| Pseudomonas putida KT2440 complete genome 40 1.7
42gb|AC186003.3| Pan troglodytes BAC clone CH251-72E16 from chromo... 38 6.9
43emb|AL136445.9| Human DNA sequence from clone RP3-376F14 on chro... 38 6.9
44emb|BX569694.1| Synechococcus sp. WH8102 complete genome; segmen... 38 6.9
45emb|BX321864.1| Nitrosomonas europaea ATCC 19718, complete genom... 38 6.9
46gb|AC104125.3| Homo sapiens chromosome 5 clone RP11-432G16, comp... 38 6.9
47gb|AC020900.5| Homo sapiens chromosome 5 clone CTC-506B8, comple... 38 6.9
48gb|AC182475.2| Pan troglodytes BAC clone CH251-196J4 from chromo... 38 6.9
49emb|AJ329205.1|HSA329205 Homo sapiens genomic sequence surroundi... 38 6.9
50emb|Z54513.1|HS127E2R H.sapiens CpG island DNA genomic Mse1 frag... 38 6.9
51dbj|AB208816.1| Homo sapiens mRNA for calpastatin isoform a vari... 38 6.9
52gb|AC155340.1| Brassica rapa subsp. pekinensis chromosome Cytoge... 38 6.9 
>gb|AY090542.1| Deschampsia antarctica clone Dacor 1.7 alanine aminotransferase
           mRNA, 3' UTR and partial cds
          Length = 583

 Score =  190 bits (96), Expect = 8e-46
 Identities = 126/137 (91%)
 Strand = Plus / Minus

                                                                       
Query: 4   tccatgaacgagncgttgaacttctngaagctcgacatgattgccggcatgtcctcctcc 63
           |||||||| ||| |||||||||||| ||||||||||||||| ||||||||||||||||| 
Sbjct: 416 tccatgaatgagtcgttgaacttcttgaagctcgacatgatcgccggcatgtcctcctct 357

                                                                       
Query: 64  gcaggcaggatcgtngtcctcagatggaacaccccttctttctgaccaaaacctgagcct 123
           || |||||||| || ||||  |||||||||||||||||||||||||| ||||||||||||
Sbjct: 356 gccggcaggatggtcgtccgaagatggaacaccccttctttctgaccgaaacctgagcct 297

                            
Query: 124 ggaacagtggatattcc 140
           |||||||||||||||||
Sbjct: 296 ggaacagtggatattcc 280
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>gb|AY236227.1| Oryza sativa (indica cultivar-group) alanine aminotransferase mRNA,
            complete cds
          Length = 1558

 Score =  149 bits (75), Expect = 3e-33
 Identities = 123/140 (87%)
 Strand = Plus / Minus

                                                                        
Query: 4    tccatgaacgagncgttgaacttctngaagctcgacatgattgccggcatgtcctcctcc 63
            |||||||| | | |||||||||||| |||||| | |||||| || |||||||||||||| 
Sbjct: 1469 tccatgaaagtgtcgttgaacttcttgaagctggtcatgatggcaggcatgtcctcctca 1410

                                                                        
Query: 64   gcaggcaggatcgtngtcctcagatggaacaccccttctttctgaccaaaacctgagcct 123
            || |||||||| || |||||||| ||||||||||||||||| || || |||||||| |||
Sbjct: 1409 gctggcaggatggtcgtcctcaggtggaacaccccttctttttgtccgaaacctgaccct 1350

                                
Query: 124  ggaacagtggatattccagt 143
            ||||||||||||||||||||
Sbjct: 1349 ggaacagtggatattccagt 1330
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>dbj|AK067732.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013118J02, full
            insert sequence
          Length = 1970

 Score =  149 bits (75), Expect = 3e-33
 Identities = 123/140 (87%)
 Strand = Plus / Minus

                                                                        
Query: 4    tccatgaacgagncgttgaacttctngaagctcgacatgattgccggcatgtcctcctcc 63
            |||||||| | | |||||||||||| |||||| | |||||| || |||||||||||||| 
Sbjct: 1518 tccatgaaagtgtcgttgaacttcttgaagctggtcatgatggcaggcatgtcctcctca 1459

                                                                        
Query: 64   gcaggcaggatcgtngtcctcagatggaacaccccttctttctgaccaaaacctgagcct 123
            || |||||||| || |||||||| ||||||||||||||||| || || |||||||| |||
Sbjct: 1458 gctggcaggatggtcgtcctcaggtggaacaccccttctttttgtccgaaacctgaccct 1399

                                
Query: 124  ggaacagtggatattccagt 143
            ||||||||||||||||||||
Sbjct: 1398 ggaacagtggatattccagt 1379
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>dbj|AK060835.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-C09, full
            insert sequence
          Length = 1581

 Score =  149 bits (75), Expect = 3e-33
 Identities = 123/140 (87%)
 Strand = Plus / Minus

                                                                        
Query: 4    tccatgaacgagncgttgaacttctngaagctcgacatgattgccggcatgtcctcctcc 63
            |||||||| | | |||||||||||| |||||| | |||||| || |||||||||||||| 
Sbjct: 1287 tccatgaaagtgtcgttgaacttcttgaagctggtcatgatggcaggcatgtcctcctca 1228

                                                                        
Query: 64   gcaggcaggatcgtngtcctcagatggaacaccccttctttctgaccaaaacctgagcct 123
            || |||||||| || |||||||| ||||||||||||||||| || || |||||||| |||
Sbjct: 1227 gctggcaggatggtcgtcctcaggtggaacaccccttctttttgtccgaaacctgaccct 1168

                                
Query: 124  ggaacagtggatattccagt 143
            ||||||||||||||||||||
Sbjct: 1167 ggaacagtggatattccagt 1148
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>gb|AY108756.1| Zea mays PCO087866 mRNA sequence
          Length = 1198

 Score =  111 bits (56), Expect = 6e-22
 Identities = 116/137 (84%)
 Strand = Plus / Minus

                                                                       
Query: 4   tccatgaacgagncgttgaacttctngaagctcgacatgattgccggcatgtcctcctcc 63
           |||||||||||| |||||||||||| ||||||||||||||| || || | ||| ||||||
Sbjct: 868 tccatgaacgagtcgttgaacttcttgaagctcgacatgatggcagggaagtcttcctcc 809

                                                                       
Query: 64  gcaggcaggatcgtngtcctcagatggaacaccccttctttctgaccaaaacctgagcct 123
           || || ||||| || ||||  || |||||||||||||| || || |||||||| ||||| 
Sbjct: 808 gctggaaggatagtggtccgaaggtggaacaccccttccttttgcccaaaaccagagccc 749

                            
Query: 124 ggaacagtggatattcc 140
           || |||||||| |||||
Sbjct: 748 gggacagtggagattcc 732
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>gb|AY109741.1| Zea mays CL1839_2 mRNA sequence
          Length = 1303

 Score = 91.7 bits (46), Expect = 5e-16
 Identities = 109/131 (83%)
 Strand = Plus / Plus

                                                                       
Query: 4   tccatgaacgagncgttgaacttctngaagctcgacatgattgccggcatgtcctcctcc 63
           |||||||| ||| |||||||||||| ||||||||||||||| |  || | ||| ||||| 
Sbjct: 199 tccatgaatgagtcgttgaacttcttgaagctcgacatgatggtagggaagtcttcctcg 258

                                                                       
Query: 64  gcaggcaggatcgtngtcctcagatggaacaccccttctttctgaccaaaacctgagcct 123
           || || ||||| || ||||  || |||||||||||||| ||||| |||||||| || || 
Sbjct: 259 gctggaaggatagttgtccgaaggtggaacaccccttccttctgcccaaaaccagatccc 318

                      
Query: 124 ggaacagtgga 134
           |||||||||||
Sbjct: 319 ggaacagtgga 329
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7,
              complete sequence
          Length = 29644043

 Score = 89.7 bits (45), Expect = 2e-15
 Identities = 81/94 (86%)
 Strand = Plus / Plus

                                                                          
Query: 4      tccatgaacgagncgttgaacttctngaagctcgacatgattgccggcatgtcctcctcc 63
              |||||||| | | |||||||||||| |||||| | |||||| || |||||||||||||| 
Sbjct: 445647 tccatgaaagtgtcgttgaacttcttgaagctggtcatgatggcaggcatgtcctcctca 445706

                                                
Query: 64     gcaggcaggatcgtngtcctcagatggaacaccc 97
              || |||||||| || |||||||| ||||||||||
Sbjct: 445707 gctggcaggatggtcgtcctcaggtggaacaccc 445740



 Score = 63.9 bits (32), Expect = 1e-07
 Identities = 44/48 (91%)
 Strand = Plus / Plus

                                                              
Query: 96     cccttctttctgaccaaaacctgagcctggaacagtggatattccagt 143
              ||||||||| || || |||||||| |||||||||||||||||||||||
Sbjct: 446025 cccttctttttgtccgaaacctgaccctggaacagtggatattccagt 446072
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>dbj|AP004342.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0585H11
          Length = 149371

 Score = 89.7 bits (45), Expect = 2e-15
 Identities = 81/94 (86%)
 Strand = Plus / Plus

                                                                         
Query: 4     tccatgaacgagncgttgaacttctngaagctcgacatgattgccggcatgtcctcctcc 63
             |||||||| | | |||||||||||| |||||| | |||||| || |||||||||||||| 
Sbjct: 47811 tccatgaaagtgtcgttgaacttcttgaagctggtcatgatggcaggcatgtcctcctca 47870

                                               
Query: 64    gcaggcaggatcgtngtcctcagatggaacaccc 97
             || |||||||| || |||||||| ||||||||||
Sbjct: 47871 gctggcaggatggtcgtcctcaggtggaacaccc 47904



 Score = 63.9 bits (32), Expect = 1e-07
 Identities = 44/48 (91%)
 Strand = Plus / Plus

                                                             
Query: 96    cccttctttctgaccaaaacctgagcctggaacagtggatattccagt 143
             ||||||||| || || |||||||| |||||||||||||||||||||||
Sbjct: 48189 cccttctttttgtccgaaacctgaccctggaacagtggatattccagt 48236
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>ref|NM_102180.2| Arabidopsis thaliana GGT1 (ALANINE-2-OXOGLUTARATE AMINOTRANSFERASE 1)
            AT1G23310 (GGT1) transcript variant AT1G23310.1 mRNA,
            complete cds
          Length = 2052

 Score = 83.8 bits (42), Expect = 1e-13
 Identities = 103/124 (83%)
 Strand = Plus / Minus

                                                                        
Query: 17   cgttgaacttctngaagctcgacatgattgccggcatgtcctcctccgcaggcaggatcg 76
            |||||||||||| ||||||   ||||||  ||||||| || || || || |||||||| |
Sbjct: 1698 cgttgaacttcttgaagctatccatgatctccggcatctcatcttctgctggcaggattg 1639

                                                                        
Query: 77   tngtcctcagatggaacaccccttctttctgaccaaaacctgagcctggaacagtggata 136
            | ||||||||||||||||| ||||||||||| ||||| || ||||| || || ||||| |
Sbjct: 1638 ttgtcctcagatggaacacaccttctttctgtccaaatccagagccaggtactgtggaga 1579

                
Query: 137  ttcc 140
            ||||
Sbjct: 1578 ttcc 1575
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>gb|AY150373.1| Arabidopsis thaliana putative alanine aminotransferase (At1g23310)
            mRNA, complete cds
          Length = 1477

 Score = 83.8 bits (42), Expect = 1e-13
 Identities = 103/124 (83%)
 Strand = Plus / Minus

                                                                        
Query: 17   cgttgaacttctngaagctcgacatgattgccggcatgtcctcctccgcaggcaggatcg 76
            |||||||||||| ||||||   ||||||  ||||||| || || || || |||||||| |
Sbjct: 1396 cgttgaacttcttgaagctatccatgatctccggcatctcatcttctgctggcaggattg 1337

                                                                        
Query: 77   tngtcctcagatggaacaccccttctttctgaccaaaacctgagcctggaacagtggata 136
            | ||||||||||||||||| ||||||||||| ||||| || ||||| || || ||||| |
Sbjct: 1336 ttgtcctcagatggaacacaccttctttctgtccaaatccagagccaggtactgtggaga 1277

                
Query: 137  ttcc 140
            ||||
Sbjct: 1276 ttcc 1273
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>gb|AF360195.1| Arabidopsis thaliana putative alanine aminotransferase (At1g23310)
            mRNA, complete cds
          Length = 1768

 Score = 83.8 bits (42), Expect = 1e-13
 Identities = 103/124 (83%)
 Strand = Plus / Minus

                                                                        
Query: 17   cgttgaacttctngaagctcgacatgattgccggcatgtcctcctccgcaggcaggatcg 76
            |||||||||||| ||||||   ||||||  ||||||| || || || || |||||||| |
Sbjct: 1520 cgttgaacttcttgaagctatccatgatctccggcatctcatcttctgctggcaggattg 1461

                                                                        
Query: 77   tngtcctcagatggaacaccccttctttctgaccaaaacctgagcctggaacagtggata 136
            | ||||||||||||||||| ||||||||||| ||||| || ||||| || || ||||| |
Sbjct: 1460 ttgtcctcagatggaacacaccttctttctgtccaaatccagagccaggtactgtggaga 1401

                
Query: 137  ttcc 140
            ||||
Sbjct: 1400 ttcc 1397
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>gb|AY058868.1| Arabidopsis thaliana At1g23310/F26F24_4 mRNA, complete cds
          Length = 1762

 Score = 83.8 bits (42), Expect = 1e-13
 Identities = 103/124 (83%)
 Strand = Plus / Minus

                                                                        
Query: 17   cgttgaacttctngaagctcgacatgattgccggcatgtcctcctccgcaggcaggatcg 76
            |||||||||||| ||||||   ||||||  ||||||| || || || || |||||||| |
Sbjct: 1502 cgttgaacttcttgaagctatccatgatctccggcatctcatcttctgctggcaggattg 1443

                                                                        
Query: 77   tngtcctcagatggaacaccccttctttctgaccaaaacctgagcctggaacagtggata 136
            | ||||||||||||||||| ||||||||||| ||||| || ||||| || || ||||| |
Sbjct: 1442 ttgtcctcagatggaacacaccttctttctgtccaaatccagagccaggtactgtggaga 1383

                
Query: 137  ttcc 140
            ||||
Sbjct: 1382 ttcc 1379
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>gb|AY056379.1| Arabidopsis thaliana At1g23310/F26F24_4 mRNA, complete cds
          Length = 1647

 Score = 83.8 bits (42), Expect = 1e-13
 Identities = 103/124 (83%)
 Strand = Plus / Minus

                                                                        
Query: 17   cgttgaacttctngaagctcgacatgattgccggcatgtcctcctccgcaggcaggatcg 76
            |||||||||||| ||||||   ||||||  ||||||| || || || || |||||||| |
Sbjct: 1502 cgttgaacttcttgaagctatccatgatctccggcatctcatcttctgctggcaggattg 1443

                                                                        
Query: 77   tngtcctcagatggaacaccccttctttctgaccaaaacctgagcctggaacagtggata 136
            | ||||||||||||||||| ||||||||||| ||||| || ||||| || || ||||| |
Sbjct: 1442 ttgtcctcagatggaacacaccttctttctgtccaaatccagagccaggtactgtggaga 1383

                
Query: 137  ttcc 140
            ||||
Sbjct: 1382 ttcc 1379
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>gb|AY042902.1| Arabidopsis thaliana alanine aminotransferase-like protein
            (F26F24.16) mRNA, partial cds
          Length = 1328

 Score = 83.8 bits (42), Expect = 1e-13
 Identities = 103/124 (83%)
 Strand = Plus / Minus

                                                                        
Query: 17   cgttgaacttctngaagctcgacatgattgccggcatgtcctcctccgcaggcaggatcg 76
            |||||||||||| ||||||   ||||||  ||||||| || || || || |||||||| |
Sbjct: 1091 cgttgaacttcttgaagctatccatgatctccggcatctcatcttctgctggcaggattg 1032

                                                                        
Query: 77   tngtcctcagatggaacaccccttctttctgaccaaaacctgagcctggaacagtggata 136
            | ||||||||||||||||| ||||||||||| ||||| || ||||| || || ||||| |
Sbjct: 1031 ttgtcctcagatggaacacaccttctttctgtccaaatccagagccaggtactgtggaga 972

                
Query: 137  ttcc 140
            ||||
Sbjct: 971  ttcc 968
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>emb|BX816016.1|CNS0AD1E Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH23ZA06 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 617

 Score = 83.8 bits (42), Expect = 1e-13
 Identities = 103/124 (83%)
 Strand = Plus / Minus

                                                                       
Query: 17  cgttgaacttctngaagctcgacatgattgccggcatgtcctcctccgcaggcaggatcg 76
           |||||||||||| ||||||   ||||||  ||||||| || || || || |||||||| |
Sbjct: 461 cgttgaacttcttgaagctatccatgatctccggcatctcatcttctgctggcaggattg 402

                                                                       
Query: 77  tngtcctcagatggaacaccccttctttctgaccaaaacctgagcctggaacagtggata 136
           | ||||||||||||||||| ||||||||||| ||||| || ||||| || || ||||| |
Sbjct: 401 ttgtcctcagatggaacacaccttctttctgtccaaatccagagccaggtactgtggaga 342

               
Query: 137 ttcc 140
           ||||
Sbjct: 341 ttcc 338
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>emb|BX814587.1|CNS0AAUD Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB82ZG03 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1707

 Score = 83.8 bits (42), Expect = 1e-13
 Identities = 103/124 (83%)
 Strand = Plus / Minus

                                                                        
Query: 17   cgttgaacttctngaagctcgacatgattgccggcatgtcctcctccgcaggcaggatcg 76
            |||||||||||| ||||||   ||||||  ||||||| || || || || |||||||| |
Sbjct: 1485 cgttgaacttcttgaagctatccatgatctccggcatctcatcttctgctggcaggattg 1426

                                                                        
Query: 77   tngtcctcagatggaacaccccttctttctgaccaaaacctgagcctggaacagtggata 136
            | ||||||||||||||||| ||||||||||| ||||| || ||||| || || ||||| |
Sbjct: 1425 ttgtcctcagatggaacacaccttctttctgtccaaatccagagccaggtactgtggaga 1366

                
Query: 137  ttcc 140
            ||||
Sbjct: 1365 ttcc 1362
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>gb|AF479639.1| Arabidopsis thaliana glutamate:glyoxylate aminotransferase 1 (GGT1)
            mRNA, complete cds
          Length = 1714

 Score = 83.8 bits (42), Expect = 1e-13
 Identities = 103/124 (83%)
 Strand = Plus / Minus

                                                                        
Query: 17   cgttgaacttctngaagctcgacatgattgccggcatgtcctcctccgcaggcaggatcg 76
            |||||||||||| ||||||   ||||||  ||||||| || || || || |||||||| |
Sbjct: 1543 cgttgaacttcttgaagctatccatgatctccggcatctcatcttctgctggcaggattg 1484

                                                                        
Query: 77   tngtcctcagatggaacaccccttctttctgaccaaaacctgagcctggaacagtggata 136
            | ||||||||||||||||| ||||||||||| ||||| || ||||| || || ||||| |
Sbjct: 1483 ttgtcctcagatggaacacaccttctttctgtccaaatccagagccaggtactgtggaga 1424

                
Query: 137  ttcc 140
            ||||
Sbjct: 1423 ttcc 1420
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>gb|BT002643.1| Arabidopsis thaliana At1g23310/F26F24_4 gene, complete cds
          Length = 1446

 Score = 83.8 bits (42), Expect = 1e-13
 Identities = 103/124 (83%)
 Strand = Plus / Minus

                                                                        
Query: 17   cgttgaacttctngaagctcgacatgattgccggcatgtcctcctccgcaggcaggatcg 76
            |||||||||||| ||||||   ||||||  ||||||| || || || || |||||||| |
Sbjct: 1396 cgttgaacttcttgaagctatccatgatctccggcatctcatcttctgctggcaggattg 1337

                                                                        
Query: 77   tngtcctcagatggaacaccccttctttctgaccaaaacctgagcctggaacagtggata 136
            | ||||||||||||||||| ||||||||||| ||||| || ||||| || || ||||| |
Sbjct: 1336 ttgtcctcagatggaacacaccttctttctgtccaaatccagagccaggtactgtggaga 1277

                
Query: 137  ttcc 140
            ||||
Sbjct: 1276 ttcc 1273
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>gb|DQ118094.1| Vitis labrusca AlaT1 mRNA, complete cds
          Length = 1434

 Score = 71.9 bits (36), Expect = 5e-10
 Identities = 103/126 (81%)
 Strand = Plus / Minus

                                                                        
Query: 19   ttgaacttctngaagctcgacatgattgccggcatgtcctcctccgcaggcaggatcgtn 78
            |||||||||| ||| ||   ||| ||||| |||||||| ||||| || |||| ||| || 
Sbjct: 1394 ttgaacttcttgaaactttccataattgcaggcatgtcttcctcagctggcaagatggtt 1335

                                                                        
Query: 79   gtcctcagatggaacaccccttctttctgaccaaaacctgagcctggaacagtggatatt 138
            ||||| |  ||||| |||||||||||||| ||||| ||||| || || |||||||| |||
Sbjct: 1334 gtccttaagtggaagaccccttctttctgtccaaatcctgaaccagggacagtggaaatt 1275

                  
Query: 139  ccagtg 144
            ||||||
Sbjct: 1274 ccagtg 1269
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>gb|DQ118095.1| Vitis vinifera AlaT1 mRNA, complete cds
          Length = 1455

 Score = 58.0 bits (29), Expect = 7e-06
 Identities = 50/57 (87%)
 Strand = Plus / Minus

                                                                     
Query: 88   tggaacaccccttctttctgaccaaaacctgagcctggaacagtggatattccagtg 144
            ||||| |||||||||||||| ||||| ||||| || || |||||||| |||||||||
Sbjct: 1325 tggaagaccccttctttctgtccaaatcctgaaccagggacagtggaaattccagtg 1269
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>gb|AC005292.4|AC005292 Genomic sequence for Arabidopsis thaliana BAC F26F24 from chromosome I,
             complete sequence
          Length = 99053

 Score = 58.0 bits (29), Expect = 7e-06
 Identities = 66/79 (83%)
 Strand = Plus / Plus

                                                                         
Query: 17    cgttgaacttctngaagctcgacatgattgccggcatgtcctcctccgcaggcaggatcg 76
             |||||||||||| ||||||   ||||||  ||||||| || || || || |||||||| |
Sbjct: 45126 cgttgaacttcttgaagctatccatgatctccggcatctcatcttctgctggcaggattg 45185

                                
Query: 77    tngtcctcagatggaacac 95
             | |||||||||||||||||
Sbjct: 45186 ttgtcctcagatggaacac 45204
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>dbj|AP004918.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT13I21, TM0076a,
             complete sequence
          Length = 71794

 Score = 58.0 bits (29), Expect = 7e-06
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                          
Query: 100   tctttctgaccaaaacctgagcctggaacagtggatattccagtg 144
             |||||||| ||||| |||||||| |||||||||||||| ||||||
Sbjct: 32352 tctttctgtccaaatcctgagccaggaacagtggatatgccagtg 32396
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>ref|NM_001036185.1| Arabidopsis thaliana AOAT2 (ALANINE-2-OXOGLUTARATE AMINOTRANSFERASE
            2); alanine transaminase AT1G70580 (AOAT2) transcript
            variant AT1G70580.3 mRNA, complete cds
          Length = 1817

 Score = 54.0 bits (27), Expect = 1e-04
 Identities = 62/74 (83%)
 Strand = Plus / Minus

                                                                        
Query: 67   ggcaggatcgtngtcctcagatggaacaccccttctttctgaccaaaacctgagcctgga 126
            ||||| || || ||||| | ||| |||||||||||||| || ||||| || |||||||||
Sbjct: 1493 ggcagaattgttgtccttaaatgaaacaccccttctttttgtccaaatccagagcctgga 1434

                          
Query: 127  acagtggatattcc 140
            || ||||| |||||
Sbjct: 1433 actgtggagattcc 1420
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>ref|NM_001036186.1| Arabidopsis thaliana AOAT2 (ALANINE-2-OXOGLUTARATE AMINOTRANSFERASE
            2); alanine transaminase AT1G70580 (AOAT2) transcript
            variant AT1G70580.4 mRNA, complete cds
          Length = 1835

 Score = 54.0 bits (27), Expect = 1e-04
 Identities = 62/74 (83%)
 Strand = Plus / Minus

                                                                        
Query: 67   ggcaggatcgtngtcctcagatggaacaccccttctttctgaccaaaacctgagcctgga 126
            ||||| || || ||||| | ||| |||||||||||||| || ||||| || |||||||||
Sbjct: 1511 ggcagaattgttgtccttaaatgaaacaccccttctttttgtccaaatccagagcctgga 1452

                          
Query: 127  acagtggatattcc 140
            || ||||| |||||
Sbjct: 1451 actgtggagattcc 1438
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>ref|NM_105726.2| Arabidopsis thaliana AOAT2 (ALANINE-2-OXOGLUTARATE AMINOTRANSFERASE
            2); alanine transaminase AT1G70580 (AOAT2) transcript
            variant AT1G70580.1 mRNA, complete cds
          Length = 1795

 Score = 54.0 bits (27), Expect = 1e-04
 Identities = 62/74 (83%)
 Strand = Plus / Minus

                                                                        
Query: 67   ggcaggatcgtngtcctcagatggaacaccccttctttctgaccaaaacctgagcctgga 126
            ||||| || || ||||| | ||| |||||||||||||| || ||||| || |||||||||
Sbjct: 1471 ggcagaattgttgtccttaaatgaaacaccccttctttttgtccaaatccagagcctgga 1412

                          
Query: 127  acagtggatattcc 140
            || ||||| |||||
Sbjct: 1411 actgtggagattcc 1398
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>ref|NM_202393.1| Arabidopsis thaliana AOAT2 (ALANINE-2-OXOGLUTARATE AMINOTRANSFERASE
            2); alanine transaminase AT1G70580 (AOAT2) transcript
            variant AT1G70580.2 mRNA, complete cds
          Length = 1851

 Score = 54.0 bits (27), Expect = 1e-04
 Identities = 62/74 (83%)
 Strand = Plus / Minus

                                                                        
Query: 67   ggcaggatcgtngtcctcagatggaacaccccttctttctgaccaaaacctgagcctgga 126
            ||||| || || ||||| | ||| |||||||||||||| || ||||| || |||||||||
Sbjct: 1527 ggcagaattgttgtccttaaatgaaacaccccttctttttgtccaaatccagagcctgga 1468

                          
Query: 127  acagtggatattcc 140
            || ||||| |||||
Sbjct: 1467 actgtggagattcc 1454
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>gb|AY062982.1| Arabidopsis thaliana putative alanine aminotransferase (At1g70580)
            mRNA, complete cds
          Length = 1477

 Score = 54.0 bits (27), Expect = 1e-04
 Identities = 62/74 (83%)
 Strand = Plus / Minus

                                                                        
Query: 67   ggcaggatcgtngtcctcagatggaacaccccttctttctgaccaaaacctgagcctgga 126
            ||||| || || ||||| | ||| |||||||||||||| || ||||| || |||||||||
Sbjct: 1346 ggcagaattgttgtccttaaatgaaacaccccttctttttgtccaaatccagagcctgga 1287

                          
Query: 127  acagtggatattcc 140
            || ||||| |||||
Sbjct: 1286 actgtggagattcc 1273
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>gb|AY035130.1| Arabidopsis thaliana putative alanine aminotransferase (At1g70580)
            mRNA, complete cds
          Length = 1773

 Score = 54.0 bits (27), Expect = 1e-04
 Identities = 62/74 (83%)
 Strand = Plus / Minus

                                                                        
Query: 67   ggcaggatcgtngtcctcagatggaacaccccttctttctgaccaaaacctgagcctgga 126
            ||||| || || ||||| | ||| |||||||||||||| || ||||| || |||||||||
Sbjct: 1471 ggcagaattgttgtccttaaatgaaacaccccttctttttgtccaaatccagagcctgga 1412

                          
Query: 127  acagtggatattcc 140
            || ||||| |||||
Sbjct: 1411 actgtggagattcc 1398
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>gb|AY084890.1| Arabidopsis thaliana clone 120310 mRNA, complete sequence
          Length = 1782

 Score = 54.0 bits (27), Expect = 1e-04
 Identities = 62/74 (83%)
 Strand = Plus / Minus

                                                                        
Query: 67   ggcaggatcgtngtcctcagatggaacaccccttctttctgaccaaaacctgagcctgga 126
            ||||| || || ||||| | ||| |||||||||||||| || ||||| || |||||||||
Sbjct: 1471 ggcagaattgttgtccttaaatgaaacaccccttctttttgtccaaatccagagcctgga 1412

                          
Query: 127  acagtggatattcc 140
            || ||||| |||||
Sbjct: 1411 actgtggagattcc 1398
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>gb|AF479640.1| Arabidopsis thaliana glutamate:glyoxylate aminotransferase 2 (GGT2)
            mRNA, complete cds
          Length = 1582

 Score = 54.0 bits (27), Expect = 1e-04
 Identities = 62/74 (83%)
 Strand = Plus / Minus

                                                                        
Query: 67   ggcaggatcgtngtcctcagatggaacaccccttctttctgaccaaaacctgagcctgga 126
            ||||| || || ||||| | ||| |||||||||||||| || ||||| || |||||||||
Sbjct: 1365 ggcagaattgttgtccttaaatgaaacaccccttctttttgtccaaatccagagcctgga 1306

                          
Query: 127  acagtggatattcc 140
            || ||||| |||||
Sbjct: 1305 actgtggagattcc 1292
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>gb|AC126783.33| Medicago truncatula clone mth2-15k17, complete sequence
          Length = 117437

 Score = 50.1 bits (25), Expect = 0.002
 Identities = 43/49 (87%)
 Strand = Plus / Plus

                                                              
Query: 96    cccttctttctgaccaaaacctgagcctggaacagtggatattccagtg 144
             |||||||||||| ||||| ||||| || || ||||||||||| ||||||
Sbjct: 77569 cccttctttctgtccaaatcctgaaccagggacagtggatatgccagtg 77617
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>emb|AJ720975.1| Gallus gallus mRNA for hypothetical protein, clone 31j3
          Length = 800

 Score = 42.1 bits (21), Expect = 0.44
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 52  atgtcctcctccgcaggcagg 72
           |||||||||||||||||||||
Sbjct: 344 atgtcctcctccgcaggcagg 364
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>ref|NM_001006475.1| Gallus gallus enhancer of rudimentary homolog (Drosophila) (ERH),
           mRNA
          Length = 800

 Score = 42.1 bits (21), Expect = 0.44
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 52  atgtcctcctccgcaggcagg 72
           |||||||||||||||||||||
Sbjct: 344 atgtcctcctccgcaggcagg 364
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>emb|CR406877.1| Gallus gallus finished cDNA, clone ChEST930h15
          Length = 832

 Score = 42.1 bits (21), Expect = 0.44
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 52  atgtcctcctccgcaggcagg 72
           |||||||||||||||||||||
Sbjct: 392 atgtcctcctccgcaggcagg 412
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>emb|CR388924.1| Gallus gallus finished cDNA, clone ChEST170e11
          Length = 682

 Score = 42.1 bits (21), Expect = 0.44
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 52  atgtcctcctccgcaggcagg 72
           |||||||||||||||||||||
Sbjct: 244 atgtcctcctccgcaggcagg 264
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>gb|AC010796.7|AC010796 Arabidopsis thaliana chromosome 1 BAC F24J13 genomic sequence, complete
             sequence
          Length = 87400

 Score = 42.1 bits (21), Expect = 0.44
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                          
Query: 96    cccttctttctgaccaaaacctgagcctggaacagtggatattcc 140
             ||||||||| || ||||| || ||||||||||| ||||| |||||
Sbjct: 65550 cccttctttttgtccaaatccagagcctggaactgtggagattcc 65506
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>gb|AC011663.7|AC011663 Arabidopsis thaliana chromosome 1 BAC F5A18 genomic sequence, complete
             sequence
          Length = 108582

 Score = 42.1 bits (21), Expect = 0.44
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                          
Query: 96    cccttctttctgaccaaaacctgagcctggaacagtggatattcc 140
             ||||||||| || ||||| || ||||||||||| ||||| |||||
Sbjct: 88952 cccttctttttgtccaaatccagagcctggaactgtggagattcc 88996
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>gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome
          Length = 2364842

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 34      ctcgacatgattgccggcat 53
               ||||||||||||||||||||
Sbjct: 1773520 ctcgacatgattgccggcat 1773539
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>emb|AL603907.12| Mouse DNA sequence from clone RP23-139D10 on chromosome 11 Contains a
             novel gene, complete sequence
          Length = 226006

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 114   acctgagcctggaacagtgg 133
             ||||||||||||||||||||
Sbjct: 90286 acctgagcctggaacagtgg 90305



 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 115   cctgagcctggaacagtgg 133
             |||||||||||||||||||
Sbjct: 90234 cctgagcctggaacagtgg 90252
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>gb|AC091214.20| Homo sapiens 12q BAC RP11-13F9 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 143331

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 95     ccccttctttctgaccaaaacctg 118
              ||||| ||||||||||||||||||
Sbjct: 121001 cccctcctttctgaccaaaacctg 120978
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>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 110     caaaacctgagcctggaacagtgg 133
               |||| |||||||||||||||||||
Sbjct: 2118155 caaagcctgagcctggaacagtgg 2118132
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>gb|AC186003.3| Pan troglodytes BAC clone CH251-72E16 from chromosome 5, complete
             sequence
          Length = 191785

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 94    accccttctttctgaccaa 112
             |||||||||||||||||||
Sbjct: 85190 accccttctttctgaccaa 85172
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>emb|AL136445.9| Human DNA sequence from clone RP3-376F14 on chromosome 6q12-13
            Contains part of the COL19A1 gene for collagen type XIX
            alpha 1, complete sequence
          Length = 51877

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 112  aaacctgagcctggaacagtgga 134
            |||||||||||||||| ||||||
Sbjct: 5002 aaacctgagcctggaaaagtgga 4980
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>emb|BX569694.1| Synechococcus sp. WH8102 complete genome; segment 6/7
          Length = 349122

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                        
Query: 108   accaaaacctgagcctggaacagtgga 134
             |||| |||||||||||||| |||||||
Sbjct: 21317 accagaacctgagcctggagcagtgga 21291
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>emb|BX321864.1| Nitrosomonas europaea ATCC 19718, complete genome; segment 9/10
          Length = 326050

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 90    gaacaccccttctttctga 108
             |||||||||||||||||||
Sbjct: 16842 gaacaccccttctttctga 16860
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>gb|AC104125.3| Homo sapiens chromosome 5 clone RP11-432G16, complete sequence
          Length = 180225

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 94     accccttctttctgaccaa 112
              |||||||||||||||||||
Sbjct: 180035 accccttctttctgaccaa 180053
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>gb|AC020900.5| Homo sapiens chromosome 5 clone CTC-506B8, complete sequence
          Length = 183768

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 94    accccttctttctgaccaa 112
             |||||||||||||||||||
Sbjct: 84934 accccttctttctgaccaa 84916
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>gb|AC182475.2| Pan troglodytes BAC clone CH251-196J4 from chromosome 5, complete
            sequence
          Length = 147307

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 94   accccttctttctgaccaa 112
            |||||||||||||||||||
Sbjct: 9252 accccttctttctgaccaa 9234
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>emb|AJ329205.1|HSA329205 Homo sapiens genomic sequence surrounding NotI site, clone
           NL1-HI21R
          Length = 901

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 94  accccttctttctgaccaa 112
           |||||||||||||||||||
Sbjct: 304 accccttctttctgaccaa 286
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>emb|Z54513.1|HS127E2R H.sapiens CpG island DNA genomic Mse1 fragment, clone 127e2,
           reverse read cpg127e2.rt1a
          Length = 106

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 94  accccttctttctgaccaa 112
           |||||||||||||||||||
Sbjct: 82  accccttctttctgaccaa 64
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>dbj|AB208816.1| Homo sapiens mRNA for calpastatin isoform a variant protein
          Length = 2972

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 94  accccttctttctgaccaa 112
           |||||||||||||||||||
Sbjct: 35  accccttctttctgaccaa 53
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>gb|AC155340.1| Brassica rapa subsp. pekinensis chromosome Cytogenetic chromosome 1
            clone KBrH020D15, complete sequence
          Length = 143633

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 47   ccggcatgtcctcctccgc 65
            |||||||||||||||||||
Sbjct: 1291 ccggcatgtcctcctccgc 1273


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 879,634
Number of Sequences: 3902068
Number of extensions: 879634
Number of successful extensions: 52207
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 52064
Number of HSP's gapped (non-prelim): 142
length of query: 144
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 123
effective length of database: 17,151,101,840
effective search space: 2109585526320
effective search space used: 2109585526320
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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