ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd22i19 |
|---|---|
| Clone Library Name | barley_pub |
>F10A1_PONPY (Q5RF31) Hsc70-interacting protein (Hip) (Protein ST13 homolog)| (Protein FAM10A1) Length = 369 Score = 67.4 bits (163), Expect = 3e-11 Identities = 29/55 (52%), Positives = 43/55 (78%) Frame = -2 Query: 466 MGDILNDPDLMSAFGDPEVMAALQDVMSNPANLAKHQANPKVGPIIAKMMAKMNG 302 + +IL+DP++++A DPEVM A QDV NPAN++K+Q+NPKV +I+K+ AK G Sbjct: 313 LNEILSDPEVLAAMQDPEVMVAFQDVAQNPANMSKYQSNPKVMNLISKLSAKFGG 367
>F10A1_HUMAN (P50502) Hsc70-interacting protein (Hip) (Suppression of| tumorigenicity protein 13) (Putative tumor suppressor ST13) (Protein FAM10A1) (Progesterone receptor-associated p48 protein) (NY-REN-33 antigen) Length = 369 Score = 67.4 bits (163), Expect = 3e-11 Identities = 29/55 (52%), Positives = 43/55 (78%) Frame = -2 Query: 466 MGDILNDPDLMSAFGDPEVMAALQDVMSNPANLAKHQANPKVGPIIAKMMAKMNG 302 + +IL+DP++++A DPEVM A QDV NPAN++K+Q+NPKV +I+K+ AK G Sbjct: 313 LNEILSDPEVLAAMQDPEVMVAFQDVAQNPANMSKYQSNPKVMNLISKLSAKFGG 367
>F10A5_HUMAN (Q8NFI4) Protein FAM10A5| Length = 369 Score = 66.6 bits (161), Expect = 6e-11 Identities = 29/55 (52%), Positives = 42/55 (76%) Frame = -2 Query: 466 MGDILNDPDLMSAFGDPEVMAALQDVMSNPANLAKHQANPKVGPIIAKMMAKMNG 302 + +IL+DP+ ++A DPEVM A QDV NPAN++K+Q+NPKV +I+K+ AK G Sbjct: 313 LNEILSDPEALAAMQDPEVMVAFQDVAQNPANMSKYQSNPKVMNLISKLSAKFGG 367
>F10A1_MOUSE (Q99L47) Hsc70-interacting protein (Hip) (Protein ST13 homolog)| (Protein FAM10A1) Length = 371 Score = 66.2 bits (160), Expect = 8e-11 Identities = 28/55 (50%), Positives = 43/55 (78%) Frame = -2 Query: 466 MGDILNDPDLMSAFGDPEVMAALQDVMSNPANLAKHQANPKVGPIIAKMMAKMNG 302 + +IL+DP++++A DPEVM A QDV NP+N++K+Q+NPKV +I+K+ AK G Sbjct: 315 LNEILSDPEVLAAMQDPEVMVAFQDVAQNPSNMSKYQSNPKVMNLISKLSAKFGG 369
>F10A1_RAT (P50503) Hsc70-interacting protein (Hip) (Protein ST13 homolog)| (Protein FAM10A1) Length = 368 Score = 65.5 bits (158), Expect = 1e-10 Identities = 28/56 (50%), Positives = 43/56 (76%) Frame = -2 Query: 466 MGDILNDPDLMSAFGDPEVMAALQDVMSNPANLAKHQANPKVGPIIAKMMAKMNGN 299 + +IL+DP++++A DPEVM A QDV NP+N++K+Q NPKV +I+K+ AK G+ Sbjct: 312 LNEILSDPEVLAAMQDPEVMVAFQDVAQNPSNMSKYQNNPKVMNLISKLSAKFGGH 367
>F10A1_CHICK (Q5ZLF0) Hsc70-interacting protein (Hip) (Protein ST13 homolog)| (Protein FAM10A1) Length = 361 Score = 65.5 bits (158), Expect = 1e-10 Identities = 29/52 (55%), Positives = 41/52 (78%) Frame = -2 Query: 466 MGDILNDPDLMSAFGDPEVMAALQDVMSNPANLAKHQANPKVGPIIAKMMAK 311 + +IL+DP++++A DPEVMAA QDV NPAN++K+Q NPKV +I K+ AK Sbjct: 305 LNEILSDPEVLAAMQDPEVMAAFQDVAQNPANMSKYQNNPKVMSLITKLSAK 356
>STI1_SCHPO (Q9USI5) Heat shock protein sti1 homolog| Length = 591 Score = 38.5 bits (88), Expect = 0.017 Identities = 19/51 (37%), Positives = 26/51 (50%) Frame = -2 Query: 466 MGDILNDPDLMSAFGDPEVMAALQDVMSNPANLAKHQANPKVGPIIAKMMA 314 M I DP+++ DP + A L NPA L +H NP V I K++A Sbjct: 534 MARIQKDPEVLGILQDPAMQAILGQARENPAALMEHMKNPTVKSKIEKLIA 584
>STI1_YEAST (P15705) Heat shock protein STI1| Length = 589 Score = 36.2 bits (82), Expect = 0.085 Identities = 16/47 (34%), Positives = 26/47 (55%) Frame = -2 Query: 454 LNDPDLMSAFGDPEVMAALQDVMSNPANLAKHQANPKVGPIIAKMMA 314 + DP++ + DP + + LQ NPA L +H NP+V I ++A Sbjct: 535 MKDPEVAAIMQDPVMQSILQQAQQNPAALQEHMKNPEVFKKIQTLIA 581
>HRP_PLABE (Q08168) 58 kDa phosphoprotein (Heat shock-related protein) (HRP)| Length = 423 Score = 36.2 bits (82), Expect = 0.085 Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 4/60 (6%) Frame = -2 Query: 454 LNDPDLMSAFGDPEVMAALQDVMSNPANLAKHQANPKVGPIIAKM----MAKMNGNR*KP 287 LN P++ F +P+ +Q++MSNP + K+ ++PK I + + M G + KP Sbjct: 364 LNSPEMKELFNNPQFFQMMQNMMSNPDLINKYASDPKYKNIFENLKNSDLGGMMGEKPKP 423
>CATA_MYCFO (O08404) Peroxidase/catalase 1 (EC 1.11.1.6) (Catalase-peroxidase| 1) Length = 752 Score = 32.7 bits (73), Expect = 0.94 Identities = 18/50 (36%), Positives = 28/50 (56%) Frame = +3 Query: 36 P*NPQASADCRPPQVQVQVHYHYLLPTYNKKPGMKSPIQQAPLHASITNQ 185 P N ++D RPPQ + H H + ++ P ++SP +A HA +TNQ Sbjct: 2 PPNTPDASDARPPQADTETHSH----SESENPVIESPKPKA--HAPLTNQ 45
>STIP1_RAT (O35814) Stress-induced-phosphoprotein 1 (STI1)| (Hsc70/Hsp90-organizing protein) (Hop) Length = 543 Score = 32.7 bits (73), Expect = 0.94 Identities = 13/44 (29%), Positives = 23/44 (52%) Frame = -2 Query: 448 DPDLMSAFGDPEVMAALQDVMSNPANLAKHQANPKVGPIIAKMM 317 DP++ DP + L+ + +P L++H NP + I K+M Sbjct: 492 DPEVQQIMSDPAMRLILEQMQKDPQALSEHLKNPVIAQKIQKLM 535
>STIP1_MOUSE (Q60864) Stress-induced-phosphoprotein 1 (STI1)| (Hsc70/Hsp90-organizing protein) (Hop) (mSTI1) Length = 543 Score = 32.7 bits (73), Expect = 0.94 Identities = 13/44 (29%), Positives = 23/44 (52%) Frame = -2 Query: 448 DPDLMSAFGDPEVMAALQDVMSNPANLAKHQANPKVGPIIAKMM 317 DP++ DP + L+ + +P L++H NP + I K+M Sbjct: 492 DPEVQQIMSDPAMRLILEQMQKDPQALSEHLKNPVIAQKIQKLM 535
>STIP1_HUMAN (P31948) Stress-induced-phosphoprotein 1 (STI1)| (Hsc70/Hsp90-organizing protein) (Hop) (Transformation-sensitive protein IEF SSP 3521) (NY-REN-11 antigen) Length = 543 Score = 32.7 bits (73), Expect = 0.94 Identities = 13/44 (29%), Positives = 23/44 (52%) Frame = -2 Query: 448 DPDLMSAFGDPEVMAALQDVMSNPANLAKHQANPKVGPIIAKMM 317 DP++ DP + L+ + +P L++H NP + I K+M Sbjct: 492 DPEVQQIMSDPAMRLILEQMQKDPQALSEHLKNPVIAQKIQKLM 535
>STIP1_CRIGR (O54981) Stress-induced-phosphoprotein 1 (STI1)| (Hsc70/Hsp90-organizing protein) (Hop) Length = 543 Score = 32.7 bits (73), Expect = 0.94 Identities = 13/44 (29%), Positives = 23/44 (52%) Frame = -2 Query: 448 DPDLMSAFGDPEVMAALQDVMSNPANLAKHQANPKVGPIIAKMM 317 DP++ DP + L+ + +P L++H NP + I K+M Sbjct: 492 DPEVQQIMSDPAMRLILEQMQKDPQALSEHLKNPVIAQKIQKLM 535
>GCN1L_HUMAN (Q92616) GCN1-like protein 1 (HsGCN1)| Length = 2670 Score = 30.8 bits (68), Expect = 3.6 Identities = 18/47 (38%), Positives = 29/47 (61%), Gaps = 2/47 (4%) Frame = -2 Query: 439 LMSAFGDPEVMAALQDVMSNPANLAKH--QANPKVGPIIAKMMAKMN 305 L +A D A Q V+ +LAKH +++PKV PI+AK++A ++ Sbjct: 1302 LKNAPNDASYDAVRQSVVVLMGSLAKHLDKSDPKVKPIVAKLIAALS 1348
>STIP_SOYBN (Q43468) Heat shock protein STI (Stress-inducible protein) (GmSTI)| Length = 569 Score = 30.8 bits (68), Expect = 3.6 Identities = 13/38 (34%), Positives = 18/38 (47%) Frame = -2 Query: 454 LNDPDLMSAFGDPEVMAALQDVMSNPANLAKHQANPKV 341 + DP++ S DP + L D NP +H NP V Sbjct: 517 MQDPEIQSILQDPVMTQVLTDFQENPRAAEEHVKNPMV 554
>ADEC_SILPO (Q5LM18) Adenine deaminase (EC 3.5.4.2) (Adenase) (Adenine aminase)| Length = 592 Score = 30.0 bits (66), Expect = 6.1 Identities = 14/53 (26%), Positives = 29/53 (54%) Frame = -2 Query: 472 VDMGDILNDPDLMSAFGDPEVMAALQDVMSNPANLAKHQANPKVGPIIAKMMA 314 + +G+++N P + +A DP+++A + + H A+P +GP A +A Sbjct: 169 IGLGEMMNFPGVTNA--DPKMLAEIAATQRAGKTVGGHYASPDLGPAFAAYVA 219
>INO80_ASPFU (Q4WTV7) Putative DNA helicase ino80 (EC 3.6.1.-)| Length = 1708 Score = 29.6 bits (65), Expect = 8.0 Identities = 12/41 (29%), Positives = 24/41 (58%) Frame = +3 Query: 180 NQHLHVSGYAKGHFQHLTKVFCPAADRKTVGHEGSWGFHRF 302 N+H +G+ + QHL +F P ++++ +G++ F RF Sbjct: 1194 NEH---AGFRGKYLQHLMNIFTPENIKRSIDEDGAFSFLRF 1231 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 84,570,640 Number of Sequences: 219361 Number of extensions: 1815354 Number of successful extensions: 5367 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 5138 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5361 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6029593548 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
