ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd22i18 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK069143.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023004K23, full insert sequence Length = 2132 Score = 206 bits (104), Expect = 5e-50 Identities = 125/132 (94%) Strand = Plus / Minus Query: 385 taatcacatttgatgtttctgtagattctcctcacaaaaagagttgaccctacatagcca 444 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 1849 taatcacatttgatgtttctgtagattctcctcacaaaaagagttgaccctagatagcca 1790 Query: 445 atagcaccgcaaagtatgcccagaccaagacagaacatcaatgtgtagccaaagtagaaa 504 |||||||| ||||||||||| |||||||| ||||||||||||||||| || ||||||||| Sbjct: 1789 atagcaccacaaagtatgcctagaccaaggcagaacatcaatgtgtaaccgaagtagaaa 1730 Query: 505 cttgtctggaaa 516 || ||||||||| Sbjct: 1729 ctcgtctggaaa 1718
>gb|BT018834.1| Zea mays clone EL01N0552D02.d mRNA sequence Length = 2172 Score = 188 bits (95), Expect = 1e-44 Identities = 131/143 (91%) Strand = Plus / Minus Query: 373 gtagcaggaaattaatcacatttgatgtttctgtagattctcctcacaaaaagagttgac 432 |||||||| | ||||||||||||||| ||||||||||||||||| |||||||| |||||| Sbjct: 1899 gtagcagggatttaatcacatttgatatttctgtagattctccttacaaaaagggttgac 1840 Query: 433 cctacatagccaatagcaccgcaaagtatgcccagaccaagacagaacatcaatgtgtag 492 |||| ||| ||||||||||| ||||||||||| |||||||| |||||||||| |||||| Sbjct: 1839 cctagatacccaatagcaccacaaagtatgcctagaccaaggcagaacatcagtgtgtaa 1780 Query: 493 ccaaagtagaaacttgtctggaa 515 ||||||||||||||||||||||| Sbjct: 1779 ccaaagtagaaacttgtctggaa 1757
>gb|BT017539.1| Zea mays clone EL01N0422C06.c mRNA sequence Length = 632 Score = 153 bits (77), Expect = 7e-34 Identities = 125/141 (88%) Strand = Plus / Minus Query: 375 agcaggaaattaatcacatttgatgtttctgtagattctcctcacaaaaagagttgaccc 434 |||||| | ||||||||||||||| || |||||||||||||| |||||||| |||||||| Sbjct: 470 agcagggatttaatcacatttgatattcctgtagattctccttacaaaaagggttgaccc 411 Query: 435 tacatagccaatagcaccgcaaagtatgcccagaccaagacagaacatcaatgtgtagcc 494 || |||||||||||| || ||||||||||| || ||||| |||||||||| |||||||| Sbjct: 410 tagatagccaatagctccacaaagtatgcctaggccaaggcagaacatcagcgtgtagcc 351 Query: 495 aaagtagaaacttgtctggaa 515 || ||||||||||||||||| Sbjct: 350 gaaatagaaacttgtctggaa 330
>dbj|AK100605.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023107G12, full insert sequence Length = 2461 Score = 145 bits (73), Expect = 2e-31 Identities = 112/125 (89%) Strand = Plus / Minus Query: 391 catttgatgtttctgtagattctcctcacaaaaagagttgaccctacatagccaatagca 450 |||||||||||||||||||||||||||||||| ||||| || |||| |||||||| |||| Sbjct: 1901 catttgatgtttctgtagattctcctcacaaagagagtagatcctagatagccaacagca 1842 Query: 451 ccgcaaagtatgcccagaccaagacagaacatcaatgtgtagccaaagtagaaacttgtc 510 |||||||| || || || || || ||||||||||| ||||||||||||||||| |||||| Sbjct: 1841 ccgcaaagaattcctagtccgaggcagaacatcaaggtgtagccaaagtagaagcttgtc 1782 Query: 511 tggaa 515 ||||| Sbjct: 1781 tggaa 1777
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 127 bits (64), Expect = 4e-26 Identities = 67/68 (98%) Strand = Plus / Minus Query: 385 taatcacatttgatgtttctgtagattctcctcacaaaaagagttgaccctacatagcca 444 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 3859530 taatcacatttgatgtttctgtagattctcctcacaaaaagagttgaccctagatagcca 3859471 Query: 445 atagcacc 452 |||||||| Sbjct: 3859470 atagcacc 3859463 Score = 85.7 bits (43), Expect = 1e-13 Identities = 58/63 (92%) Strand = Plus / Minus Query: 454 caaagtatgcccagaccaagacagaacatcaatgtgtagccaaagtagaaacttgtctgg 513 ||||||||||| |||||||| ||||||||||||||||| || ||||||||||| |||||| Sbjct: 3859372 caaagtatgcctagaccaaggcagaacatcaatgtgtaaccgaagtagaaactcgtctgg 3859313 Query: 514 aaa 516 ||| Sbjct: 3859312 aaa 3859310 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 aagaaacaaagaaaaataag 134 |||||||||||||||||||| Sbjct: 19967011 aagaaacaaagaaaaataag 19967030
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 127 bits (64), Expect = 4e-26 Identities = 67/68 (98%) Strand = Plus / Minus Query: 385 taatcacatttgatgtttctgtagattctcctcacaaaaagagttgaccctacatagcca 444 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 3859504 taatcacatttgatgtttctgtagattctcctcacaaaaagagttgaccctagatagcca 3859445 Query: 445 atagcacc 452 |||||||| Sbjct: 3859444 atagcacc 3859437 Score = 85.7 bits (43), Expect = 1e-13 Identities = 58/63 (92%) Strand = Plus / Minus Query: 454 caaagtatgcccagaccaagacagaacatcaatgtgtagccaaagtagaaacttgtctgg 513 ||||||||||| |||||||| ||||||||||||||||| || ||||||||||| |||||| Sbjct: 3859346 caaagtatgcctagaccaaggcagaacatcaatgtgtaaccgaagtagaaactcgtctgg 3859287 Query: 514 aaa 516 ||| Sbjct: 3859286 aaa 3859284 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 aagaaacaaagaaaaataag 134 |||||||||||||||||||| Sbjct: 19893225 aagaaacaaagaaaaataag 19893244
>emb|AL732376.2|CNS08C8Z Oryza sativa chromosome 12, . BAC OSJNBa0086B10 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 152090 Score = 127 bits (64), Expect = 4e-26 Identities = 67/68 (98%) Strand = Plus / Minus Query: 385 taatcacatttgatgtttctgtagattctcctcacaaaaagagttgaccctacatagcca 444 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 21506 taatcacatttgatgtttctgtagattctcctcacaaaaagagttgaccctagatagcca 21447 Query: 445 atagcacc 452 |||||||| Sbjct: 21446 atagcacc 21439 Score = 85.7 bits (43), Expect = 1e-13 Identities = 58/63 (92%) Strand = Plus / Minus Query: 454 caaagtatgcccagaccaagacagaacatcaatgtgtagccaaagtagaaacttgtctgg 513 ||||||||||| |||||||| ||||||||||||||||| || ||||||||||| |||||| Sbjct: 21348 caaagtatgcctagaccaaggcagaacatcaatgtgtaaccgaagtagaaactcgtctgg 21289 Query: 514 aaa 516 ||| Sbjct: 21288 aaa 21286
>gb|AY109323.1| Zea mays CL4004_3 mRNA sequence Length = 1730 Score = 121 bits (61), Expect = 2e-24 Identities = 113/132 (85%) Strand = Plus / Minus Query: 384 ttaatcacatttgatgtttctgtagattctcctcacaaaaagagttgaccctacatagcc 443 ||||||||||||||| || |||||||||||||| || | |||||||||| |||||| Sbjct: 1035 ttaatcacatttgatattcctgtagattctccttacnnnnngggttgaccctagatagcc 976 Query: 444 aatagcaccgcaaagtatgcccagaccaagacagaacatcaatgtgtagccaaagtagaa 503 |||||| || ||||||||||| || ||||| |||||||||| |||||||| || ||||| Sbjct: 975 aatagctccacaaagtatgcctaggccaaggcagaacatcagcgtgtagccgaaatagaa 916 Query: 504 acttgtctggaa 515 |||||||||||| Sbjct: 915 acttgtctggaa 904
>gb|AY110409.1| Zea mays CL62941_1 mRNA sequence Length = 700 Score = 117 bits (59), Expect = 4e-23 Identities = 107/123 (86%) Strand = Plus / Minus Query: 391 catttgatgtttctgtagattctcctcacaaaaagagttgaccctacatagccaatagca 450 |||||||| ||||||||||| ||||||||||| || || || || | ||| |||| |||| Sbjct: 360 catttgatatttctgtagatcctcctcacaaatagggtggagcccaaatatccaacagca 301 Query: 451 ccgcaaagtatgcccagaccaagacagaacatcaatgtgtagccaaagtagaaacttgtc 510 ||||||||||| |||| ||||||||||||||||| ||||| ||||||||||| |||||| Sbjct: 300 ccgcaaagtattcccaatccaagacagaacatcaaggtgtaaccaaagtagaagcttgtc 241 Query: 511 tgg 513 ||| Sbjct: 240 tgg 238
>ref|NM_100970.2| Arabidopsis thaliana transporter AT1G10950 mRNA, complete cds Length = 2238 Score = 99.6 bits (50), Expect = 9e-18 Identities = 104/122 (85%) Strand = Plus / Minus Query: 394 ttgatgtttctgtagattctcctcacaaaaagagttgaccctacatagccaatagcaccg 453 ||||||||||||||||| ||||| ||||| ||| |||| || | ||||||| ||| ||| Sbjct: 1866 ttgatgtttctgtagatcctccttacaaacagatttgatcccaggtagccaacagctccg 1807 Query: 454 caaagtatgcccagaccaagacagaacatcaatgtgtagccaaagtagaaacttgtctgg 513 ||||| || || || |||||||||||||||| ||||| ||||||||||| ||||||||| Sbjct: 1806 caaaggattccaaggccaagacagaacatcatggtgtatccaaagtagaagcttgtctgg 1747 Query: 514 aa 515 || Sbjct: 1746 aa 1745
>gb|AY063907.1| Arabidopsis thaliana putative endomembrane protein EMP70 precusor isolog (At1g10950) mRNA, complete cds Length = 2113 Score = 99.6 bits (50), Expect = 9e-18 Identities = 104/122 (85%) Strand = Plus / Minus Query: 394 ttgatgtttctgtagattctcctcacaaaaagagttgaccctacatagccaatagcaccg 453 ||||||||||||||||| ||||| ||||| ||| |||| || | ||||||| ||| ||| Sbjct: 1843 ttgatgtttctgtagatcctccttacaaacagatttgatcccaggtagccaacagctccg 1784 Query: 454 caaagtatgcccagaccaagacagaacatcaatgtgtagccaaagtagaaacttgtctgg 513 ||||| || || || |||||||||||||||| ||||| ||||||||||| ||||||||| Sbjct: 1783 caaaggattccaaggccaagacagaacatcatggtgtatccaaagtagaagcttgtctgg 1724 Query: 514 aa 515 || Sbjct: 1723 aa 1722
>gb|AY056242.1| Arabidopsis thaliana putative endomembrane protein EMP70 precusor isolog (At1g10950) mRNA, partial cds Length = 1650 Score = 99.6 bits (50), Expect = 9e-18 Identities = 104/122 (85%) Strand = Plus / Minus Query: 394 ttgatgtttctgtagattctcctcacaaaaagagttgaccctacatagccaatagcaccg 453 ||||||||||||||||| ||||| ||||| ||| |||| || | ||||||| ||| ||| Sbjct: 1377 ttgatgtttctgtagatcctccttacaaacagatttgatcccaggtagccaacagctccg 1318 Query: 454 caaagtatgcccagaccaagacagaacatcaatgtgtagccaaagtagaaacttgtctgg 513 ||||| || || || |||||||||||||||| ||||| ||||||||||| ||||||||| Sbjct: 1317 caaaggattccaaggccaagacagaacatcatggtgtatccaaagtagaagcttgtctgg 1258 Query: 514 aa 515 || Sbjct: 1257 aa 1256
>gb|BT008600.1| Arabidopsis thaliana clone U11293 putative endomembrane protein 70 (At1g10950) mRNA, complete cds Length = 1966 Score = 99.6 bits (50), Expect = 9e-18 Identities = 104/122 (85%) Strand = Plus / Minus Query: 394 ttgatgtttctgtagattctcctcacaaaaagagttgaccctacatagccaatagcaccg 453 ||||||||||||||||| ||||| ||||| ||| |||| || | ||||||| ||| ||| Sbjct: 1760 ttgatgtttctgtagatcctccttacaaacagatttgatcccaggtagccaacagctccg 1701 Query: 454 caaagtatgcccagaccaagacagaacatcaatgtgtagccaaagtagaaacttgtctgg 513 ||||| || || || |||||||||||||||| ||||| ||||||||||| ||||||||| Sbjct: 1700 caaaggattccaaggccaagacagaacatcatggtgtatccaaagtagaagcttgtctgg 1641 Query: 514 aa 515 || Sbjct: 1640 aa 1639
>gb|AY081536.1| Arabidopsis thaliana endomembrane protein EMP70 precusor isolog (At1g10950) mRNA, complete cds Length = 1888 Score = 99.6 bits (50), Expect = 9e-18 Identities = 104/122 (85%) Strand = Plus / Minus Query: 394 ttgatgtttctgtagattctcctcacaaaaagagttgaccctacatagccaatagcaccg 453 ||||||||||||||||| ||||| ||||| ||| |||| || | ||||||| ||| ||| Sbjct: 1760 ttgatgtttctgtagatcctccttacaaacagatttgatcccaggtagccaacagctccg 1701 Query: 454 caaagtatgcccagaccaagacagaacatcaatgtgtagccaaagtagaaacttgtctgg 513 ||||| || || || |||||||||||||||| ||||| ||||||||||| ||||||||| Sbjct: 1700 caaaggattccaaggccaagacagaacatcatggtgtatccaaagtagaagcttgtctgg 1641 Query: 514 aa 515 || Sbjct: 1640 aa 1639
>gb|AF446365.1|AF446365 Arabidopsis thaliana At1g10950/T19D16_13 mRNA, complete cds Length = 2094 Score = 99.6 bits (50), Expect = 9e-18 Identities = 104/122 (85%) Strand = Plus / Minus Query: 394 ttgatgtttctgtagattctcctcacaaaaagagttgaccctacatagccaatagcaccg 453 ||||||||||||||||| ||||| ||||| ||| |||| || | ||||||| ||| ||| Sbjct: 1866 ttgatgtttctgtagatcctccttacaaacagatttgatcccaggtagccaacagctccg 1807 Query: 454 caaagtatgcccagaccaagacagaacatcaatgtgtagccaaagtagaaacttgtctgg 513 ||||| || || || |||||||||||||||| ||||| ||||||||||| ||||||||| Sbjct: 1806 caaaggattccaaggccaagacagaacatcatggtgtatccaaagtagaagcttgtctgg 1747 Query: 514 aa 515 || Sbjct: 1746 aa 1745
>gb|AY054666.1| Arabidopsis thaliana endomembrane protein EMP70 precusor isolog (At1g10950; T19D16.13) mRNA, complete cds Length = 2062 Score = 99.6 bits (50), Expect = 9e-18 Identities = 104/122 (85%) Strand = Plus / Minus Query: 394 ttgatgtttctgtagattctcctcacaaaaagagttgaccctacatagccaatagcaccg 453 ||||||||||||||||| ||||| ||||| ||| |||| || | ||||||| ||| ||| Sbjct: 1819 ttgatgtttctgtagatcctccttacaaacagatttgatcccaggtagccaacagctccg 1760 Query: 454 caaagtatgcccagaccaagacagaacatcaatgtgtagccaaagtagaaacttgtctgg 513 ||||| || || || |||||||||||||||| ||||| ||||||||||| ||||||||| Sbjct: 1759 caaaggattccaaggccaagacagaacatcatggtgtatccaaagtagaagcttgtctgg 1700 Query: 514 aa 515 || Sbjct: 1699 aa 1698
>gb|AC135794.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0084H09, complete sequence Length = 130151 Score = 83.8 bits (42), Expect = 5e-13 Identities = 57/62 (91%) Strand = Plus / Minus Query: 391 catttgatgtttctgtagattctcctcacaaaaagagttgaccctacatagccaatagca 450 |||||||||||||||||||||||||||||||| ||||| || |||| |||||||| |||| Sbjct: 34974 catttgatgtttctgtagattctcctcacaaagagagtagatcctagatagccaacagca 34915 Query: 451 cc 452 || Sbjct: 34914 cc 34913 Score = 69.9 bits (35), Expect = 8e-09 Identities = 59/67 (88%) Strand = Plus / Minus Query: 449 caccgcaaagtatgcccagaccaagacagaacatcaatgtgtagccaaagtagaaacttg 508 |||||||||| || || || || || ||||||||||| ||||||||||||||||| |||| Sbjct: 34841 caccgcaaagaattcctagtccgaggcagaacatcaaggtgtagccaaagtagaagcttg 34782 Query: 509 tctggaa 515 ||||||| Sbjct: 34781 tctggaa 34775
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 83.8 bits (42), Expect = 5e-13 Identities = 57/62 (91%) Strand = Plus / Minus Query: 391 catttgatgtttctgtagattctcctcacaaaaagagttgaccctacatagccaatagca 450 |||||||||||||||||||||||||||||||| ||||| || |||| |||||||| |||| Sbjct: 4063312 catttgatgtttctgtagattctcctcacaaagagagtagatcctagatagccaacagca 4063253 Query: 451 cc 452 || Sbjct: 4063252 cc 4063251 Score = 69.9 bits (35), Expect = 8e-09 Identities = 59/67 (88%) Strand = Plus / Minus Query: 449 caccgcaaagtatgcccagaccaagacagaacatcaatgtgtagccaaagtagaaacttg 508 |||||||||| || || || || || ||||||||||| ||||||||||||||||| |||| Sbjct: 4063179 caccgcaaagaattcctagtccgaggcagaacatcaaggtgtagccaaagtagaagcttg 4063120 Query: 509 tctggaa 515 ||||||| Sbjct: 4063119 tctggaa 4063113 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 aaagaaacaaagaaaaataa 133 |||||||||||||||||||| Sbjct: 25929199 aaagaaacaaagaaaaataa 25929180
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 83.8 bits (42), Expect = 5e-13 Identities = 57/62 (91%) Strand = Plus / Minus Query: 391 catttgatgtttctgtagattctcctcacaaaaagagttgaccctacatagccaatagca 450 |||||||||||||||||||||||||||||||| ||||| || |||| |||||||| |||| Sbjct: 4072006 catttgatgtttctgtagattctcctcacaaagagagtagatcctagatagccaacagca 4071947 Query: 451 cc 452 || Sbjct: 4071946 cc 4071945 Score = 69.9 bits (35), Expect = 8e-09 Identities = 59/67 (88%) Strand = Plus / Minus Query: 449 caccgcaaagtatgcccagaccaagacagaacatcaatgtgtagccaaagtagaaacttg 508 |||||||||| || || || || || ||||||||||| ||||||||||||||||| |||| Sbjct: 4071873 caccgcaaagaattcctagtccgaggcagaacatcaaggtgtagccaaagtagaagcttg 4071814 Query: 509 tctggaa 515 ||||||| Sbjct: 4071813 tctggaa 4071807 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 aaagaaacaaagaaaaataa 133 |||||||||||||||||||| Sbjct: 26247897 aaagaaacaaagaaaaataa 26247878
>gb|U95973.1|U95973 Arabidopsis thaliana chromosome 1 BAC T19D16 genomic sequence, complete sequence Length = 115641 Score = 69.9 bits (35), Expect = 8e-09 Identities = 59/67 (88%) Strand = Plus / Plus Query: 449 caccgcaaagtatgcccagaccaagacagaacatcaatgtgtagccaaagtagaaacttg 508 |||||||||| || || || |||||||||||||||| ||||| ||||||||||| |||| Sbjct: 64513 caccgcaaaggattccaaggccaagacagaacatcatggtgtatccaaagtagaagcttg 64572 Query: 509 tctggaa 515 ||||||| Sbjct: 64573 tctggaa 64579 Score = 44.1 bits (22), Expect = 0.45 Identities = 34/38 (89%) Strand = Plus / Plus Query: 394 ttgatgtttctgtagattctcctcacaaaaagagttga 431 ||||||||||||||||| ||||| ||||| ||| |||| Sbjct: 64374 ttgatgtttctgtagatcctccttacaaacagatttga 64411
>ref|XM_466169.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2240 Score = 50.1 bits (25), Expect = 0.007 Identities = 100/125 (80%) Strand = Plus / Minus Query: 388 tcacatttgatgtttctgtagattctcctcacaaaaagagttgaccctacatagccaata 447 ||||| || ||||| |||||||| || |||||||| || || || || | ||| || | | Sbjct: 1860 tcacactttatgttcctgtagatccttctcacaaacagtgtcgatccaagatacccgaca 1801 Query: 448 gcaccgcaaagtatgcccagaccaagacagaacatcaatgtgtagccaaagtagaaactt 507 |||||||| ||| | || | ||| || |||||||| | |||||||| |||||||||||| Sbjct: 1800 gcaccgcagagtgttcctaaacctaggcagaacataagagtgtagccgaagtagaaactt 1741 Query: 508 gtctg 512 ||||| Sbjct: 1740 gtctg 1736
>ref|XM_506821.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1004_H01.22 mRNA Length = 2266 Score = 50.1 bits (25), Expect = 0.007 Identities = 100/125 (80%) Strand = Plus / Minus Query: 388 tcacatttgatgtttctgtagattctcctcacaaaaagagttgaccctacatagccaata 447 ||||| || ||||| |||||||| || |||||||| || || || || | ||| || | | Sbjct: 1886 tcacactttatgttcctgtagatccttctcacaaacagtgtcgatccaagatacccgaca 1827 Query: 448 gcaccgcaaagtatgcccagaccaagacagaacatcaatgtgtagccaaagtagaaactt 507 |||||||| ||| | || | ||| || |||||||| | |||||||| |||||||||||| Sbjct: 1826 gcaccgcagagtgttcctaaacctaggcagaacataagagtgtagccgaagtagaaactt 1767 Query: 508 gtctg 512 ||||| Sbjct: 1766 gtctg 1762
>gb|AC115891.7| Mus musculus chromosome 10, clone RP24-421G4, complete sequence Length = 166946 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 103 ggaatgcaacaaaagaaacaaagaaaaat 131 |||||| |||||||||||||||||||||| Sbjct: 144433 ggaatggaacaaaagaaacaaagaaaaat 144461
>gb|AC110043.6| Mus musculus chromosome 10, clone RP23-296O20, complete sequence Length = 158081 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 103 ggaatgcaacaaaagaaacaaagaaaaat 131 |||||| |||||||||||||||||||||| Sbjct: 8541 ggaatggaacaaaagaaacaaagaaaaat 8569
>dbj|AK099161.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023068L16, full insert sequence Length = 2240 Score = 50.1 bits (25), Expect = 0.007 Identities = 100/125 (80%) Strand = Plus / Minus Query: 388 tcacatttgatgtttctgtagattctcctcacaaaaagagttgaccctacatagccaata 447 ||||| || ||||| |||||||| || |||||||| || || || || | ||| || | | Sbjct: 1860 tcacactttatgttcctgtagatccttctcacaaacagtgtcgatccaagatacccgaca 1801 Query: 448 gcaccgcaaagtatgcccagaccaagacagaacatcaatgtgtagccaaagtagaaactt 507 |||||||| ||| | || | ||| || |||||||| | |||||||| |||||||||||| Sbjct: 1800 gcaccgcagagtgttcctaaacctaggcagaacataagagtgtagccgaagtagaaactt 1741 Query: 508 gtctg 512 ||||| Sbjct: 1740 gtctg 1736
>dbj|AK067736.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013117E08, full insert sequence Length = 2265 Score = 50.1 bits (25), Expect = 0.007 Identities = 100/125 (80%) Strand = Plus / Minus Query: 388 tcacatttgatgtttctgtagattctcctcacaaaaagagttgaccctacatagccaata 447 ||||| || ||||| |||||||| || |||||||| || || || || | ||| || | | Sbjct: 1885 tcacactttatgttcctgtagatccttctcacaaacagtgtcgatccaagatacccgaca 1826 Query: 448 gcaccgcaaagtatgcccagaccaagacagaacatcaatgtgtagccaaagtagaaactt 507 |||||||| ||| | || | ||| || |||||||| | |||||||| |||||||||||| Sbjct: 1825 gcaccgcagagtgttcctaaacctaggcagaacataagagtgtagccgaagtagaaactt 1766 Query: 508 gtctg 512 ||||| Sbjct: 1765 gtctg 1761
>gb|AY448010.1|AY448010S1 Ipomoea trifida haplotype S1 self-incompatibility (S-) locus, contig SR1 Length = 82054 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 110 aacaaaagaaacaaagaaaaata 132 ||||||||||||||||||||||| Sbjct: 8497 aacaaaagaaacaaagaaaaata 8519
>emb|AL450344.4| Human DNA sequence from clone RP11-136K14 on chromosome 6 Contains three novel genes, the 5' end of a novel gene (contains FLJ31738 and KIAA1209) and a CpG island, complete sequence Length = 150005 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 113 aaaagaaacaaagaaaaataaga 135 ||||||||||||||||||||||| Sbjct: 62605 aaaagaaacaaagaaaaataaga 62583
>emb|BX005130.10| Mouse DNA sequence from clone RP23-475L14 on chromosome 2, complete sequence Length = 127298 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 114 aaagaaacaaagaaaaataagaa 136 ||||||||||||||||||||||| Sbjct: 39249 aaagaaacaaagaaaaataagaa 39271
>gb|AC117581.8| Mus musculus chromosome 3, clone RP23-105M18, complete sequence Length = 215747 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 105 aatgcaacaaaagaaacaaagaaaaa 130 |||||||||||||||||||| ||||| Sbjct: 116669 aatgcaacaaaagaaacaaacaaaaa 116694
>emb|AL158154.28| Human DNA sequence from clone RP11-383M4 on chromosome 9 Contains two novel genes and three putative novel pseudogenes, complete sequence Length = 189319 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 113 aaaagaaacaaagaaaaataag 134 |||||||||||||||||||||| Sbjct: 92594 aaaagaaacaaagaaaaataag 92615
>gb|AC022929.6| Homo sapiens, clone RP11-326N17, complete sequence Length = 165328 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 344 tgatactgctccgcccccaccc 365 |||||||||||||||||||||| Sbjct: 89254 tgatactgctccgcccccaccc 89233
>gb|AC009724.9| Homo sapiens, clone RP11-45N10, complete sequence Length = 155630 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 344 tgatactgctccgcccccaccc 365 |||||||||||||||||||||| Sbjct: 90555 tgatactgctccgcccccaccc 90576
>gb|AC018710.4|AC018710 Homo sapiens BAC clone RP11-296L20 from 4, complete sequence Length = 197236 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 209 caaataagtatgcaaaaagaag 230 |||||||||||||||||||||| Sbjct: 53999 caaataagtatgcaaaaagaag 54020
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Minus Query: 487 gtgtagccaaagtagaaacttgtctg 512 |||||||| ||||||||||||||||| Sbjct: 20834415 gtgtagccgaagtagaaacttgtctg 20834390
>dbj|AP004038.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1004_H01 Length = 121377 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Minus Query: 487 gtgtagccaaagtagaaacttgtctg 512 |||||||| ||||||||||||||||| Sbjct: 76876 gtgtagccgaagtagaaacttgtctg 76851
>emb|AL627229.10| Mouse DNA sequence from clone RP23-354L19 on chromosome 4, complete sequence Length = 149730 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 354 ccgcccccaccccacatatgtagcag 379 |||||||| ||||||||||||||||| Sbjct: 17619 ccgccccccccccacatatgtagcag 17644
>gb|AC008341.3| Drosophila melanogaster clone BACR15P11, complete sequence Length = 171235 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 105 aatgcaacaaaagaaacaaag 125 ||||||||||||||||||||| Sbjct: 85111 aatgcaacaaaagaaacaaag 85131
>gb|AC113316.14| Mus musculus chromosome 5, clone RP23-441I24, complete sequence Length = 247892 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 110 aacaaaagaaacaaagaaaaa 130 ||||||||||||||||||||| Sbjct: 8923 aacaaaagaaacaaagaaaaa 8943
>gb|AC069559.27| Mus musculus strain C57BL/6J clone rp23-136j2 map 9, complete sequence Length = 185365 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 110 aacaaaagaaacaaagaaaaa 130 ||||||||||||||||||||| Sbjct: 131718 aacaaaagaaacaaagaaaaa 131698
>emb|AL512600.5| Human DNA sequence from clone RP11-452A14 on chromosome 6, complete sequence Length = 141172 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 113 aaaagaaacaaagaaaaataa 133 ||||||||||||||||||||| Sbjct: 55302 aaaagaaacaaagaaaaataa 55282
>emb|AL121752.13|HSDJ468N4 Human DNA sequence from clone RP3-468N4 on chromosome 20 Contains part of the C20orf44 gene for chromosome 20 open reading frame 44, complete sequence Length = 68692 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 113 aaaagaaacaaagaaaaataa 133 ||||||||||||||||||||| Sbjct: 16787 aaaagaaacaaagaaaaataa 16807
>emb|AL669859.5| Mouse DNA sequence from clone RP23-167D6 on chromosome 11, complete sequence Length = 155196 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 113 aaaagaaacaaagaaaaataagaacctgc 141 |||| |||||||| ||||||||||||||| Sbjct: 70920 aaaacaaacaaagcaaaataagaacctgc 70892
>gb|AC115019.28| Mus musculus chromosome 5, clone RP24-224J7, complete sequence Length = 175448 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 110 aacaaaagaaacaaagaaaaa 130 ||||||||||||||||||||| Sbjct: 58963 aacaaaagaaacaaagaaaaa 58943
>emb|AL671983.18| Mouse DNA sequence from clone RP23-232B3 on chromosome X, complete sequence Length = 176577 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 113 aaaagaaacaaagaaaaataa 133 ||||||||||||||||||||| Sbjct: 112954 aaaagaaacaaagaaaaataa 112934
>gb|AC145022.28| Medicago truncatula clone mth2-8m24, complete sequence Length = 108548 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 223 aaaagaaggggtgtgatggaa 243 ||||||||||||||||||||| Sbjct: 90447 aaaagaaggggtgtgatggaa 90427
>gb|AC105753.2| Homo sapiens chromosome 3 clone RP11-189A1, complete sequence Length = 146753 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 96 aaaaggaggaatgcaacaaaagaaacaaagaaa 128 |||||||||||| || |||||||||||||||| Sbjct: 41147 aaaaggaggaattaaaaaaaagaaacaaagaaa 41179
>gb|AC099775.2| Homo sapiens chromosome 3 clone RP11-169G24, complete sequence Length = 181443 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 96 aaaaggaggaatgcaacaaaagaaacaaagaaa 128 |||||||||||| || |||||||||||||||| Sbjct: 80236 aaaaggaggaattaaaaaaaagaaacaaagaaa 80268
>gb|AC092706.3| Homo sapiens chromosome 18, clone RP11-658P14, complete sequence Length = 178059 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 110 aacaaaagaaacaaagaaaaataag 134 ||||||||||| ||||||||||||| Sbjct: 83746 aacaaaagaaataaagaaaaataag 83722
>gb|AC125310.5| Mus musculus BAC clone RP24-548E5 from chromosome 1, complete sequence Length = 223534 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 330 tatatgatttcttctgatact 350 ||||||||||||||||||||| Sbjct: 193794 tatatgatttcttctgatact 193774
>gb|AC163761.3| Pan troglodytes BAC clone CH251-214O19 from chromosome unknown, complete sequence Length = 193316 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 113 aaaagaaacaaagaaaaataa 133 ||||||||||||||||||||| Sbjct: 141701 aaaagaaacaaagaaaaataa 141721
>gb|AE014845.1| Plasmodium falciparum 3D7 chromosome 12, section 2 of 9 of the complete sequence Length = 250531 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 111 acaaaagaaacaaagaaaaat 131 ||||||||||||||||||||| Sbjct: 124348 acaaaagaaacaaagaaaaat 124368
>gb|AC169379.4| Sorghum bicolor clone SB_BBc0088B22, complete sequence Length = 105215 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 113 aaaagaaacaaagaaaaataa 133 ||||||||||||||||||||| Sbjct: 99221 aaaagaaacaaagaaaaataa 99241
>dbj|AP002066.1| Arabidopsis thaliana genomic DNA, chromosome 3, BAC clone: T4A2 Length = 18364 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 113 aaaagaaacaaagaaaaataa 133 ||||||||||||||||||||| Sbjct: 16892 aaaagaaacaaagaaaaataa 16872
>emb|CR388409.5| Zebrafish DNA sequence from clone DKEY-60P1 in linkage group 18, complete sequence Length = 40942 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 367 acatatgtagcaggaaattaa 387 ||||||||||||||||||||| Sbjct: 24340 acatatgtagcaggaaattaa 24320
>gb|AE003833.4| Drosophila melanogaster chromosome 2R, section 17 of 73 of the complete sequence Length = 297107 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 105 aatgcaacaaaagaaacaaag 125 ||||||||||||||||||||| Sbjct: 28780 aatgcaacaaaagaaacaaag 28800
>gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome Length = 5411809 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 112 caaaagaaacaaagaaaaata 132 ||||||||||||||||||||| Sbjct: 953932 caaaagaaacaaagaaaaata 953952
>emb|AL772378.8| Mouse DNA sequence from clone RP23-106C4 on chromosome X, complete sequence Length = 109193 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 110 aacaaaagaaacaaagaaaaa 130 ||||||||||||||||||||| Sbjct: 54871 aacaaaagaaacaaagaaaaa 54851
>emb|AJ421480.1| Mus musculus X-inactivation center region; segment 3/3 Length = 214384 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 110 aacaaaagaaacaaagaaaaa 130 ||||||||||||||||||||| Sbjct: 94710 aacaaaagaaacaaagaaaaa 94730
>emb|AL928689.7| Mouse DNA sequence from clone RP23-35P3 on chromosome 2, complete sequence Length = 182529 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 113 aaaagaaacaaagaaaaataagaac 137 |||||||| |||||||||||||||| Sbjct: 64880 aaaagaaagaaagaaaaataagaac 64856
>gb|AC101748.7| Mus musculus chromosome 5, clone RP24-133H21, complete sequence Length = 168366 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 atttctgatttgaaaaggag 103 |||||||||||||||||||| Sbjct: 107551 atttctgatttgaaaaggag 107532
>gb|AC107725.10| Mus musculus chromosome 5, clone RP23-477O15, complete sequence Length = 169321 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 113 aaaagaaacaaagaaaaataagaa 136 |||||||||||||||||| ||||| Sbjct: 163252 aaaagaaacaaagaaaaaaaagaa 163275
>gb|AC005347.1| Homo sapiens chromosome 16, cosmid clone 308C6 (LANL), complete sequence Length = 35828 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 aaaagaaacaaagaaaaata 132 |||||||||||||||||||| Sbjct: 12260 aaaagaaacaaagaaaaata 12279
>gb|AC145891.4| Pan troglodytes BAC clone RP43-20A24 from 7, complete sequence Length = 194412 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 113 aaaagaaacaaagaaaaataagaa 136 |||||||| ||||||||||||||| Sbjct: 133542 aaaagaaagaaagaaaaataagaa 133519
>gb|AC146080.4| Pan troglodytes BAC clone RP43-51K11 from 7, complete sequence Length = 190306 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 113 aaaagaaacaaagaaaaataagaa 136 |||||||| ||||||||||||||| Sbjct: 100356 aaaagaaagaaagaaaaataagaa 100333
>gb|AC146145.3| Pan troglodytes BAC clone RP43-37L16 from 7, complete sequence Length = 209347 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 caacaaaagaaacaaagaaa 128 |||||||||||||||||||| Sbjct: 144159 caacaaaagaaacaaagaaa 144178
>gb|AC139321.4| Mus musculus BAC clone RP24-425N6 from chromosome 1, complete sequence Length = 148379 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 caacaaaagaaacaaagaaa 128 |||||||||||||||||||| Sbjct: 118170 caacaaaagaaacaaagaaa 118151
>gb|AC161187.5| Mus musculus chromosome 5, clone RP23-297H22, complete sequence Length = 171367 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 gaacaaataagtatgcaaaa 225 |||||||||||||||||||| Sbjct: 85874 gaacaaataagtatgcaaaa 85893 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 113 aaaagaaacaaagaaaaataagaa 136 |||||||||||||||||| ||||| Sbjct: 25890 aaaagaaacaaagaaaaaaaagaa 25913
>gb|AC110038.25| Mus musculus chromosome 1, clone RP23-258M15, complete sequence Length = 232830 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 113 aaaagaaacaaagaaaaataagaa 136 |||||||| ||||||||||||||| Sbjct: 80821 aaaagaaaaaaagaaaaataagaa 80798
>gb|AC157549.4| Mus musculus chromosome 8, clone RP24-374O12, complete sequence Length = 132933 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 114 aaagaaacaaagaaaaataagaac 137 ||||||| |||||||||||||||| Sbjct: 31960 aaagaaagaaagaaaaataagaac 31937
>gb|AC163668.5| Mus musculus BAC clone RP23-32P22 from chromosome 1, complete sequence Length = 222156 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 aaaagaaacaaagaaaaata 132 |||||||||||||||||||| Sbjct: 87062 aaaagaaacaaagaaaaata 87043
>gb|AC123941.3| Mus musculus BAC clone RP23-458G24 from chromosome 19, complete sequence Length = 182733 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 caacaattcagaggggaagt 52 |||||||||||||||||||| Sbjct: 132361 caacaattcagaggggaagt 132342
>emb|CT009691.8| Zebrafish DNA sequence from clone CH73-64E1 in linkage group 5, complete sequence Length = 99497 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 111 acaaaagaaacaaagaaaaataag 134 |||||| ||||||||||||||||| Sbjct: 25350 acaaaacaaacaaagaaaaataag 25373
>gb|AC145877.3| Pan troglodytes BAC clone RP43-20I7 from 7, complete sequence Length = 192794 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 aacaaaagaaacaaagaaaa 129 |||||||||||||||||||| Sbjct: 65909 aacaaaagaaacaaagaaaa 65890
>emb|CR545479.12| Zebrafish DNA sequence from clone CH211-219M24 in linkage group 17, complete sequence Length = 188250 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 113 aaaagaaacaaagaaaaataagaa 136 |||||||| ||||||||||||||| Sbjct: 70570 aaaagaaagaaagaaaaataagaa 70593
>gb|AC113589.13| Mus musculus chromosome 9, clone RP23-257A19, complete sequence Length = 213826 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 caacaaaagaaacaaagaaa 128 |||||||||||||||||||| Sbjct: 204281 caacaaaagaaacaaagaaa 204262
>gb|AC123032.5| Mus musculus BAC clone RP24-480K24 from chromosome 10, complete sequence Length = 162676 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 caaaagaaacaaagaaaaat 131 |||||||||||||||||||| Sbjct: 26274 caaaagaaacaaagaaaaat 26293
>gb|AC117518.3| Homo sapiens X BAC RP13-106B4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 170368 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 113 aaaagaaacaaagaaaaataagaa 136 ||||||||||||||| |||||||| Sbjct: 60824 aaaagaaacaaagaacaataagaa 60801
>gb|AC129206.3| Mus musculus BAC clone RP24-269P22 from chromosome 8, complete sequence Length = 181214 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 111 acaaaagaaacaaagaaaaa 130 |||||||||||||||||||| Sbjct: 59000 acaaaagaaacaaagaaaaa 58981
>gb|AC121888.3| Mus musculus BAC clone RP24-142M5 from chromosome 1, complete sequence Length = 158354 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 caacaaaagaaacaaagaaa 128 |||||||||||||||||||| Sbjct: 24446 caacaaaagaaacaaagaaa 24427
>gb|AC122856.3| Mus musculus BAC clone RP23-121N19 from 3, complete sequence Length = 187311 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 110 aacaaaagaaacaaagaaaaataagaac 137 ||||||| |||| ||||||||||||||| Sbjct: 68567 aacaaaaaaaaccaagaaaaataagaac 68594
>gb|AC121602.2| Mus musculus BAC clone RP23-309B19 from 10, complete sequence Length = 182661 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 caaaagaaacaaagaaaaat 131 |||||||||||||||||||| Sbjct: 30179 caaaagaaacaaagaaaaat 30160
>ref|XM_759480.1| Theileria parva strain Muguga hypothetical protein (TP02_0004) partial mRNA Length = 1740 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 111 acaaaagaaacaaagaaaaa 130 |||||||||||||||||||| Sbjct: 1020 acaaaagaaacaaagaaaaa 1039
>ref|XM_759482.1| Theileria parva strain Muguga hypothetical protein (TP02_0006) partial mRNA Length = 1788 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 111 acaaaagaaacaaagaaaaa 130 |||||||||||||||||||| Sbjct: 1020 acaaaagaaacaaagaaaaa 1039
>gb|AC110200.9| Mus musculus chromosome 16, clone RP23-150K16, complete sequence Length = 179548 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 aaagaaacaaagaaaaataa 133 |||||||||||||||||||| Sbjct: 107753 aaagaaacaaagaaaaataa 107772
>gb|AC113275.8| Mus musculus chromosome 8, clone RP23-383K23, complete sequence Length = 253984 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 114 aaagaaacaaagaaaaataagaac 137 ||||||| |||||||||||||||| Sbjct: 169908 aaagaaagaaagaaaaataagaac 169885
>gb|AC110251.11| Mus musculus chromosome 5, clone RP23-263O8, complete sequence Length = 197946 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 gaacaaataagtatgcaaaa 225 |||||||||||||||||||| Sbjct: 28155 gaacaaataagtatgcaaaa 28174
>gb|AC163618.4| Mus musculus BAC clone RP24-158G13 from chromosome 3, complete sequence Length = 198108 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaccccacatatgtagcag 379 |||||||||||||||||||| Sbjct: 14984 ccaccccacatatgtagcag 15003
>gb|AC113043.7| Mus musculus chromosome 1, clone RP23-243C7, complete sequence Length = 191557 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 207 aacaaataagtatgcaaaaagaag 230 ||||||| |||||||||||||||| Sbjct: 91124 aacaaatcagtatgcaaaaagaag 91147
>gb|AC131249.43| Medicago truncatula clone mth2-8p18, complete sequence Length = 104866 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 aaagaaggggtgtgatggaa 243 |||||||||||||||||||| Sbjct: 30124 aaagaaggggtgtgatggaa 30143
>gb|AC152751.22| Medicago truncatula clone mth2-18n7, complete sequence Length = 117170 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 caaaagaaacaaagaaaaat 131 |||||||||||||||||||| Sbjct: 67401 caaaagaaacaaagaaaaat 67420
>gb|AC161223.4| Mus musculus chromosome 3, clone RP24-173A7, complete sequence Length = 156824 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 aacaaaagaaacaaagaaaa 129 |||||||||||||||||||| Sbjct: 37642 aacaaaagaaacaaagaaaa 37661
>emb|AJ810094.1| Sida yellow mosaic virus-[China]-associated DNA beta, isolate Hn40 Length = 1346 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 113 aaaagaaacaaagaaaaataagaa 136 |||||||| ||||||||||||||| Sbjct: 815 aaaagaaaaaaagaaaaataagaa 838
>emb|AJ810093.1| Sida yellow mosaic virus-[China]-associated DNA beta, isolate Hn8 Length = 1346 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 113 aaaagaaacaaagaaaaataagaa 136 |||||||| ||||||||||||||| Sbjct: 815 aaaagaaaaaaagaaaaataagaa 838
>emb|AL356295.9| Human DNA sequence from clone RP11-768P11 on chromosome 13, complete sequence Length = 134347 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 aacaaaagaaacaaagaaaa 129 |||||||||||||||||||| Sbjct: 133174 aacaaaagaaacaaagaaaa 133193
>gb|AC111653.8| Rattus norvegicus 2 BAC CH230-108E11 (Children's Hospital Oakland Research Institute) complete sequence Length = 247105 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 348 actgctccgcccccaccccacata 371 ||||| |||||||||||||||||| Sbjct: 113351 actgccccgcccccaccccacata 113328
>emb|AL133519.28| Human DNA sequence from clone RP11-122O1 on chromosome 20 Contains the VIAAT gene for vesicular inhibitory amino acid transporter, the ACTR5 gene for ARP5 actin-related protein 5 homolog (yeast) and three CpG islands, complete sequence Length = 96299 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 113 aaaagaaacaaagaaaaataagaa 136 |||||||||||||||||| ||||| Sbjct: 4988 aaaagaaacaaagaaaaaaaagaa 4965
>emb|AL049636.22|HSDJ792G4 Human DNA sequence from clone RP4-792G4 on chromosome 1p31.2-32.2 Contains the 5' end of the ALG6 gene for asparagine-linked glycosylation 6 homolog (yeast alpha-1 3-glucosyltransferase), a DnaJ (Hsp40) homolog subfamily C member 7 (DNAJC7) pseudogene, the FOXD3 gene for forkhead box D3, a novel gene, the 5' end of a novel gene and a CpG island, complete sequence Length = 142728 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 110 aacaaaagaaacaaagaaaaataa 133 |||||||||| ||||||||||||| Sbjct: 17306 aacaaaagaagcaaagaaaaataa 17329
>emb|AL031732.8|HS410I8 Human DNA sequence from clone RP3-410I8 on chromosome 1p35.1-36.23 Contains a tubulin-specific chaperone a (TBCA) pseudogene, complete sequence Length = 69017 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 110 aacaaaagaaacaaagaaaaataa 133 ||||||||||| |||||||||||| Sbjct: 45866 aacaaaagaaagaaagaaaaataa 45843
>emb|AL023807.6|HS525L6 Human DNA sequence from clone RP3-525L6 on chromosome 6p22.3-23 Contains the 5' end of a gene for a kinesin-like protein (RBKIN) protein, a ribosomal protein S12 (RPS12) pseudogene and a CpG Island, complete sequence Length = 168111 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 113 aaaagaaacaaagaaaaataagaa 136 |||||||| ||||||||||||||| Sbjct: 145413 aaaagaaagaaagaaaaataagaa 145436
>emb|AL031074.1|HS143G3 Human DNA sequence from clone RP1-143G3 on chromosome Xq24-25, complete sequence Length = 99204 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 110 aacaaaagaaacaaagaaaaataagaac 137 ||||||||||||||| |||||| ||||| Sbjct: 78829 aacaaaagaaacaaaaaaaaatgagaac 78802
>gb|AC080008.23| Homo sapiens 3 BAC RP11-615P1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 197883 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 caacaaaagaaacaaagaaa 128 |||||||||||||||||||| Sbjct: 192854 caacaaaagaaacaaagaaa 192835
>ref|XM_964909.1| PREDICTED: Tribolium castaneum similar to CG9007-PA (LOC658527), mRNA Length = 4251 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 gaaaaggaggaatgcaacaa 114 |||||||||||||||||||| Sbjct: 3850 gaaaaggaggaatgcaacaa 3869
>gb|AC129227.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBb0099J16, complete sequence Length = 133198 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 aaagaaacaaagaaaaataa 133 |||||||||||||||||||| Sbjct: 75767 aaagaaacaaagaaaaataa 75786
>emb|AL596382.12| Mouse DNA sequence from clone RP23-337J7 on chromosome 11, complete sequence Length = 225083 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 88 ctgatttgaaaaggaggaatgcaa 111 |||||||||||||||| ||||||| Sbjct: 68790 ctgatttgaaaaggagaaatgcaa 68767
>emb|CR352285.4| Zebrafish DNA sequence from clone CH211-210K13 in linkage group 11, complete sequence Length = 133334 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 110 aacaaaagaaacaaagaaaaataa 133 ||||||| |||||||||||||||| Sbjct: 69690 aacaaaaaaaacaaagaaaaataa 69667
>emb|CR391966.8| Zebrafish DNA sequence from clone CH211-269M15 in linkage group 8, complete sequence Length = 105854 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 aaaagaaacaaagaaaaata 132 |||||||||||||||||||| Sbjct: 46133 aaaagaaacaaagaaaaata 46152
>emb|BX927386.11| Zebrafish DNA sequence from clone CH211-54F10 in linkage group 1, complete sequence Length = 80968 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 aacaaataagtatgcaaaaa 226 |||||||||||||||||||| Sbjct: 77000 aacaaataagtatgcaaaaa 77019
>emb|BX255874.1| Mouse DNA sequence from clone RP24-181E15 on chromosome 11 Contains part of a novel gene (4933435A13Rik), complete sequence Length = 26866 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 cttcctatttctgatttgaa 97 |||||||||||||||||||| Sbjct: 4897 cttcctatttctgatttgaa 4916
>emb|AL646095.27| Mouse DNA sequence from clone RP23-17P18 on chromosome 11 Contains the 3' end of the Asb3 gene for ankyrin repeat and SOCS box-containing protein 3 and two zinc finger protein pseudogenes, complete sequence Length = 173655 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 aacaaaagaaacaaagaaaa 129 |||||||||||||||||||| Sbjct: 13013 aacaaaagaaacaaagaaaa 12994
>emb|AL672240.13| Mouse DNA sequence from clone RP23-27I16 on chromosome 11, complete sequence Length = 224603 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 agaaacaaagaaaaataaga 135 |||||||||||||||||||| Sbjct: 99801 agaaacaaagaaaaataaga 99782
>emb|AL646101.7| Mouse DNA sequence from clone RP23-145E14 on chromosome 11, complete sequence Length = 169742 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 113 aaaagaaacaaagaaaaataagaa 136 |||||||| ||||||||||||||| Sbjct: 110433 aaaagaaagaaagaaaaataagaa 110456
>gb|AC005145.1| Homo sapiens Xp22-166-169 GSHB-523A23 (Genome Systems Human BAC library) complete sequence Length = 143678 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 113 aaaagaaacaaagaaaaataagaa 136 ||||||||||||||| |||||||| Sbjct: 94666 aaaagaaacaaagaacaataagaa 94689
>gb|AC121337.7| Homo sapiens 12 BAC RP11-96H19 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 110110 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 122 aaagaaaaataagaacctgc 141 |||||||||||||||||||| Sbjct: 52370 aaagaaaaataagaacctgc 52351
>gb|AC011029.7| Homo sapiens chromosome 8, clone RP11-202L1, complete sequence Length = 161123 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 aaaagaaacaaagaaaaata 132 |||||||||||||||||||| Sbjct: 11851 aaaagaaacaaagaaaaata 11832
>gb|AC154795.2| Mus musculus BAC clone RP24-486D21 from chromosome 14, complete sequence Length = 153985 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 262 ttctgaaaccctaatcaggaacta 285 ||||||||||||||||||| |||| Sbjct: 37738 ttctgaaaccctaatcagggacta 37761
>emb|BX649626.14| Zebrafish DNA sequence from clone CH211-148N10 in linkage group 6, complete sequence Length = 160105 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 113 aaaagaaacaaagaaaaataagaa 136 |||||||||||||||||| ||||| Sbjct: 30805 aaaagaaacaaagaaaaaaaagaa 30828
>gb|AC091682.26| Mus musculus strain C57BL/6J chromosome 3 clone rp23-135c10, complete sequence Length = 206957 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccaccccacatatgtagcag 379 |||||||||||||||||||| Sbjct: 131781 ccaccccacatatgtagcag 131800
>gb|DQ374067.1| Beta vulgaris chromosome 9 clone BAC137 genomic sequence Length = 25152 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 aaaagaaacaaagaaaaata 132 |||||||||||||||||||| Sbjct: 21987 aaaagaaacaaagaaaaata 22006
>emb|BX548077.12| Zebrafish DNA sequence from clone DKEY-11A7 in linkage group 17, complete sequence Length = 242711 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 110 aacaaaagaaacaaagaaaaataa 133 ||||||| |||||||||||||||| Sbjct: 87406 aacaaaataaacaaagaaaaataa 87383
>gb|AC084864.4| Homo sapiens chromosome 7 clone RP11-738B7, complete sequence Length = 176562 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 113 aaaagaaacaaagaaaaataagaa 136 |||||||| ||||||||||||||| Sbjct: 138706 aaaagaaagaaagaaaaataagaa 138729
>gb|AC006419.4| Arabidopsis thaliana chromosome 2 clone F3K12 map mi421, complete sequence Length = 113960 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 aaacaaagaaaaataagaac 137 |||||||||||||||||||| Sbjct: 16280 aaacaaagaaaaataagaac 16261
>gb|AC084865.3| Homo sapiens chromosome 7 clone RP11-437L1, complete sequence Length = 214162 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 113 aaaagaaacaaagaaaaataagaa 136 |||||||| ||||||||||||||| Sbjct: 60415 aaaagaaagaaagaaaaataagaa 60438
>gb|AC098480.2| Homo sapiens chromosome 3 clone RP11-149J4, complete sequence Length = 188681 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 gagagcagctccagggaaca 210 |||||||||||||||||||| Sbjct: 40704 gagagcagctccagggaaca 40685
>gb|AC009196.14| Homo sapiens chromosome 7 clone RP11-49B7, complete sequence Length = 170763 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 aacaaaagaaacaaagaaaa 129 |||||||||||||||||||| Sbjct: 104962 aacaaaagaaacaaagaaaa 104981
>gb|AC098595.2| Homo sapiens BAC clone RP11-495L18 from 4, complete sequence Length = 160151 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 111 acaaaagaaacaaagaaaaa 130 |||||||||||||||||||| Sbjct: 86879 acaaaagaaacaaagaaaaa 86898
>gb|AC073510.7| Homo sapiens chromosome 8, clone RP11-240O2, complete sequence Length = 133085 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 aaaagaaacaaagaaaaata 132 |||||||||||||||||||| Sbjct: 89734 aaaagaaacaaagaaaaata 89715
>gb|AC010462.6| Homo sapiens chromosome 5 clone CTD-2276M2, complete sequence Length = 136506 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 111 acaaaagaaacaaagaaaaa 130 |||||||||||||||||||| Sbjct: 87065 acaaaagaaacaaagaaaaa 87046
>gb|AC154538.2| Mus musculus BAC clone RP23-451M23 from chromosome 16, complete sequence Length = 176390 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 aacaaaagaaacaaagaaaa 129 |||||||||||||||||||| Sbjct: 3264 aacaaaagaaacaaagaaaa 3283
>gb|AC160964.1| Mus musculus BAC clone RP24-316G24 from chromosome 9, complete sequence Length = 158842 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 caacaaaagaaacaaagaaa 128 |||||||||||||||||||| Sbjct: 38024 caacaaaagaaacaaagaaa 38005
>gb|AC008105.32| Homo sapiens chromosome 17, clone CTD-2020K17, complete sequence Length = 96875 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 111 acaaaagaaacaaagaaaaa 130 |||||||||||||||||||| Sbjct: 26892 acaaaagaaacaaagaaaaa 26911
>gb|AC023880.5|AC023880 Homo sapiens PAC clone RP5-999D10 from 7, complete sequence Length = 90422 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 113 aaaagaaacaaagaaaaataagaa 136 |||||||| ||||||||||||||| Sbjct: 54419 aaaagaaagaaagaaaaataagaa 54396
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 107 tgcaacaaaagaaacaaagaaaaa 130 |||||||| ||||||||||||||| Sbjct: 6960693 tgcaacaacagaaacaaagaaaaa 6960670
>gb|AC008915.11| Homo sapiens chromosome 16 clone CTD-2270L9, complete sequence Length = 135873 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 aacaaaagaaacaaagaaaa 129 |||||||||||||||||||| Sbjct: 94529 aacaaaagaaacaaagaaaa 94548
>gb|AC154430.3| Mus musculus BAC clone RP24-208K8 from chromosome 16, complete sequence Length = 178222 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 aacaaaagaaacaaagaaaa 129 |||||||||||||||||||| Sbjct: 60182 aacaaaagaaacaaagaaaa 60163
>emb|BX640583.7| Zebrafish DNA sequence from clone CH211-186C22 in linkage group 21, complete sequence Length = 130141 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 aacaaaagaaacaaagaaaa 129 |||||||||||||||||||| Sbjct: 35063 aacaaaagaaacaaagaaaa 35044
>gb|AC078844.2|AC078844 Homo sapiens chromosome 7 clone RP11-786M13, complete sequence Length = 186927 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 aacaaaagaaacaaagaaaa 129 |||||||||||||||||||| Sbjct: 186568 aacaaaagaaacaaagaaaa 186587
>gb|AF463765.1| Mus musculus strain C57BL/6J cytokine gene cluster, partial sequence Length = 24139 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 88 ctgatttgaaaaggaggaatgcaa 111 |||||||||||||||| ||||||| Sbjct: 21791 ctgatttgaaaaggagaaatgcaa 21814
>gb|AC084297.3| Homo sapiens BAC clone RP11-44H9 from 2, complete sequence Length = 112292 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 113 aaaagaaacaaagaaaaataagaa 136 |||||||||||| ||||||||||| Sbjct: 98319 aaaagaaacaaaaaaaaataagaa 98342
>gb|AC138071.2| Homo sapiens chromosome 3 clone RP11-504G20, complete sequence Length = 194062 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 gagagcagctccagggaaca 210 |||||||||||||||||||| Sbjct: 190515 gagagcagctccagggaaca 190496
>dbj|AP002902.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0492F05 Length = 159242 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 107 tgcaacaaaagaaacaaagaaaaa 130 |||||||| ||||||||||||||| Sbjct: 128417 tgcaacaacagaaacaaagaaaaa 128394
>dbj|AP002900.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0443E07 Length = 159440 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 107 tgcaacaaaagaaacaaagaaaaa 130 |||||||| ||||||||||||||| Sbjct: 82511 tgcaacaacagaaacaaagaaaaa 82488
>dbj|AB038480.1| Bryopsis plumosa chloroplast rbcL gene for ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial cds Length = 3809 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 395 tgatgtttctgtagattctc 414 |||||||||||||||||||| Sbjct: 2955 tgatgtttctgtagattctc 2936
>emb|BX510916.7| Zebrafish DNA sequence from clone DKEY-208B17 in linkage group 5, complete sequence Length = 174866 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 111 acaaaagaaacaaagaaaaataag 134 |||||| ||||||||||||||||| Sbjct: 32729 acaaaacaaacaaagaaaaataag 32752
>emb|AL731729.10| Mouse DNA sequence from clone RP23-92L12 on chromosome X, complete sequence Length = 216656 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 aacaaaagaaacaaagaaaa 129 |||||||||||||||||||| Sbjct: 127444 aacaaaagaaacaaagaaaa 127425
>emb|AM048833.1| Sida yellow mosaic virus-[China]-associated DNA beta c1 gene for SatC1 protein, isolate Hn7 Length = 1355 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 113 aaaagaaacaaagaaaaataagaa 136 |||||||| ||||||||||||||| Sbjct: 817 aaaagaaaaaaagaaaaataagaa 840
>gb|AC121544.9| Mus musculus chromosome 3, clone RP24-483I22, complete sequence Length = 134800 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 aacaaaagaaacaaagaaaa 129 |||||||||||||||||||| Sbjct: 8268 aacaaaagaaacaaagaaaa 8249
>dbj|AP003082.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-746C14, complete sequence Length = 189635 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 aaagaaacaaagaaaaataa 133 |||||||||||||||||||| Sbjct: 157520 aaagaaacaaagaaaaataa 157539
>gb|AC103351.11| Mus musculus chromosome 18, clone RP23-406A11, complete sequence Length = 174352 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 aacaaaagaaacaaagaaaa 129 |||||||||||||||||||| Sbjct: 11057 aacaaaagaaacaaagaaaa 11076
>gb|AC108421.8| Mus musculus chromosome 19, clone RP23-433N7, complete sequence Length = 190980 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 caacaattcagaggggaagt 52 |||||||||||||||||||| Sbjct: 58090 caacaattcagaggggaagt 58071
>gb|AC107780.12| Mus musculus chromosome 8, clone RP23-61O10, complete sequence Length = 244047 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 aaagaaacaaagaaaaataa 133 |||||||||||||||||||| Sbjct: 195051 aaagaaacaaagaaaaataa 195032
>gb|AC116782.11| Mus musculus chromosome 5, clone RP24-145A24, complete sequence Length = 167925 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 aaagaaacaaagaaaaataa 133 |||||||||||||||||||| Sbjct: 115297 aaagaaacaaagaaaaataa 115316
>emb|AL928581.8| Mouse DNA sequence from clone RP23-318H20 on chromosome 2, complete sequence Length = 178735 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 caacaaaagaaacaaagaaa 128 |||||||||||||||||||| Sbjct: 118355 caacaaaagaaacaaagaaa 118374
>dbj|AP006296.1| Homo sapiens genomic DNA, chromosome 11 clone:RP11-137N23, complete sequence Length = 57462 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 113 aaaagaaacaaagaaaaataagaa 136 |||||||||||||||||| ||||| Sbjct: 31769 aaaagaaacaaagaaaaaaaagaa 31792
>emb|BX004877.10| Zebrafish DNA sequence from clone DKEY-7L19 in linkage group 17, complete sequence Length = 249239 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 110 aacaaaagaaacaaagaaaaataa 133 ||||||| |||||||||||||||| Sbjct: 165756 aacaaaataaacaaagaaaaataa 165779
>emb|BX284641.9| Mouse DNA sequence from clone RP23-70B20 on chromosome 2, complete sequence Length = 16418 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 77 acttcctatttctgatttgaaaag 100 ||||||| |||||||||||||||| Sbjct: 8366 acttcctctttctgatttgaaaag 8389
>emb|AL731888.5|CNS08C8S Oryza sativa chromosome 12, . BAC OJ1118_C12 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 165433 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 aagaaacaaagaaaaataag 134 |||||||||||||||||||| Sbjct: 60249 aagaaacaaagaaaaataag 60230
>emb|CR759821.9| Zebrafish DNA sequence from clone DKEY-190C14 in linkage group 5, complete sequence Length = 169089 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 111 acaaaagaaacaaagaaaaataag 134 |||||| ||||||||||||||||| Sbjct: 17411 acaaaacaaacaaagaaaaataag 17434
>dbj|AP004525.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT08O18, TM0052b, complete sequence Length = 86497 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 aacaaaagaaacaaagaaaa 129 |||||||||||||||||||| Sbjct: 51033 aacaaaagaaacaaagaaaa 51014
>emb|X55877.1|CHBMRBCL B.maxima plastid rbcL gene for ribulose bisphosphate carboxylase large subunit Length = 4485 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 395 tgatgtttctgtagattctc 414 |||||||||||||||||||| Sbjct: 3386 tgatgtttctgtagattctc 3367
>emb|AL672184.13| Mouse DNA sequence from clone RP23-421G11 on chromosome X, complete sequence Length = 211206 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 caaaagaaacaaagaaaaat 131 |||||||||||||||||||| Sbjct: 60353 caaaagaaacaaagaaaaat 60372
>emb|AL773580.11| Mouse DNA sequence from clone RP23-26G3 on chromosome X, complete sequence Length = 210533 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 caacaaaagaaacaaagaaa 128 |||||||||||||||||||| Sbjct: 64368 caacaaaagaaacaaagaaa 64387
>emb|AL672298.4| Mouse DNA sequence from clone RP23-456D8 on chromosome X, complete sequence Length = 204050 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 tgatttgaaaaggaggaatg 108 |||||||||||||||||||| Sbjct: 72621 tgatttgaaaaggaggaatg 72640
>emb|AL845269.3| Mouse DNA sequence from clone RP23-139B17 on chromosome X, complete sequence Length = 17262 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 117 gaaacaaagaaaaataagaa 136 |||||||||||||||||||| Sbjct: 11890 gaaacaaagaaaaataagaa 11909
>dbj|AP004247.2| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-659P15, complete sequence Length = 203084 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 aacaaaagaaacaaagaaaa 129 |||||||||||||||||||| Sbjct: 192449 aacaaaagaaacaaagaaaa 192468 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,095,609 Number of Sequences: 3902068 Number of extensions: 6095609 Number of successful extensions: 154308 Number of sequences better than 10.0: 165 Number of HSP's better than 10.0 without gapping: 169 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 153361 Number of HSP's gapped (non-prelim): 946 length of query: 516 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 493 effective length of database: 17,143,297,704 effective search space: 8451645768072 effective search space used: 8451645768072 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
