>UVRC_RICCN (Q92HA7) UvrABC system protein C (Protein uvrC) (Excinuclease ABC|
           subunit C)
          Length = 639

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 4/71 (5%)
 Frame = -1

Query: 514 QYKPISGDIQLLSKKIPVTKYLNLQVGIGHNFQLK----ATGWKWKLTTCLGGDGVSHIR 347
           Q+  I  ++  L K +PV KYL +     HNF +K          K++     +GV   R
Sbjct: 536 QFHVIGKEVFTLDKNLPVMKYLQILRDEAHNFAIKNHRLGRSRAIKISRLDDIEGVGETR 595

Query: 346 NKSKLNLFPGF 314
            K+ L+ F  +
Sbjct: 596 KKALLHYFGSY 606

>UVRC_RICFE (Q4UL10) UvrABC system protein C (Protein uvrC) (Excinuclease ABC|
           subunit C)
          Length = 642

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 4/71 (5%)
 Frame = -1

Query: 514 QYKPISGDIQLLSKKIPVTKYLNLQVGIGHNFQLK----ATGWKWKLTTCLGGDGVSHIR 347
           Q+     ++  L K +P+ KYL +     HNF +K          KL++    +G+   R
Sbjct: 539 QFHMTGKEVFTLDKNLPIMKYLQILRDEAHNFAIKNHRLGRSRAIKLSSLDDIEGIGETR 598

Query: 346 NKSKLNLFPGF 314
            K+ L+ F  +
Sbjct: 599 KKALLHYFGSY 609

>RADC_PHOPR (Q6LVN4) DNA repair protein radC homolog|
          Length = 224

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = -1

Query: 73  LLASFEDFHPMYRNEQTLFCQHKG 2
           LLA F     ++  +QTLFC HKG
Sbjct: 50  LLAEFGSLRALFAADQTLFCLHKG 73

>PRO1_NEUCR (Q9P326) Transcriptional regulatory protein pro-1|
          Length = 696

 Score = 29.3 bits (64), Expect = 6.9
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -3

Query: 467 SSYKVPQPSGRHWSQFPTEGDWME 396
           S+Y+ P P G     FP EG+W E
Sbjct: 218 STYQTPPPPGTILPSFPLEGEWTE 241

>SYLM_SACDO (P13503) Leucyl-tRNA synthetase, mitochondrial precursor (EC|
           6.1.1.4) (Leucine--tRNA ligase) (LeuRS)
          Length = 894

 Score = 28.9 bits (63), Expect = 9.0
 Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
 Frame = -1

Query: 466 PVTKYLNLQVGIGHNFQ-LKATGWKWKLTTCLGGDGVSHIRNKSKLNL----FPGFDLRL 302
           P +++L+ Q G G   + L A G KWK  T  G      + N+SK  L    +P   L +
Sbjct: 5   PSSRFLSTQRGPGRAVKKLIAIGEKWKQKTTRGPPKQGTLNNRSKYILCQFPYPSGVLHI 64

Query: 301 GWKAEYVLPE 272
           G    YV+ +
Sbjct: 65  GHLRVYVISD 74

>SC10A_CANFA (O46669) Sodium channel protein type 10 alpha subunit (Sodium channel|
            protein type X alpha subunit) (Voltage-gated sodium
            channel alpha subunit Nav1.8) (NaNG)
          Length = 1962

 Score = 28.9 bits (63), Expect = 9.0
 Identities = 18/54 (33%), Positives = 25/54 (46%)
 Frame = +2

Query: 275  RKHIFSFPTEPQIKPWKQVEF*FVSYVRNTISPQASSELPLPSSRLQLEIVTNA 436
            +K I +F T P + PW + E            PQ   +LPL SS+ +  I  NA
Sbjct: 934  KKAICNFFTRPCLLPWPKAE------------PQLVVKLPLSSSKAENHIAANA 975


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 82,234,593
Number of Sequences: 219361
Number of extensions: 1821357
Number of successful extensions: 4103
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4013
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4101
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3985467738
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)