ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd22i17
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_472654.1| Oryza sativa (japonica cultivar-group), predic... 396 e-107
2dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 222 9e-55
3emb|AL731593.2|OSJN00235 Oryza sativa genomic DNA, chromosome 4,... 222 9e-55
4gb|AY111293.1| Zea mays CL10140_1 mRNA sequence 210 3e-51
5dbj|AK154966.1| Mus musculus NOD-derived CD11c +ve dendritic cel... 44 0.45
6gb|AC158356.2| Mus musculus BAC clone RP23-475P8 from chromosome... 44 0.45
7emb|AL158111.5|CNS01RGL Human chromosome 14 DNA sequence BAC R-1... 44 0.45
8emb|AL133449.5|CNS01DV3 Human chromosome 14 DNA sequence BAC R-1... 44 0.45
9emb|AL672047.10| Mouse DNA sequence from clone RP23-316B4 on chr... 42 1.8
10gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome 42 1.8
11emb|AL672170.11| Mouse DNA sequence from clone RP23-435C17 on ch... 42 1.8
12gb|AY831670.1| Influenza A virus (A/chicken/MD/MINH MA/2004(H7N2... 40 7.1
13gb|AY831669.1| Influenza A virus (A/chicken/DE/VIVA/2004(H7N2)) ... 40 7.1
14gb|AY831668.1| Influenza A virus (A/chicken/DE/HOBO/2004(H7N2)) ... 40 7.1
15gb|AC158957.2| Mus musculus chromosome 15, clone RP23-27P5, comp... 40 7.1
16gb|AC138232.10| Mus musculus chromosome 1, clone RP23-39C19, com... 40 7.1
17gb|AC132331.3| Mus musculus BAC clone RP24-217D10 from chromosom... 40 7.1
18gb|DQ480516.1| Hepatitis C virus subtype 6a strain 6a61, complet... 40 7.1
19gb|AY240925.1| Influenza A virus (A/avian/NY/73063-6/00(H7N2)) h... 40 7.1
20gb|AY240920.1| Influenza A virus (A/chicken/NY/34173-3/99(H7N2))... 40 7.1
21gb|AY240918.1| Influenza A virus (A/chicken/NJ/15827/99(H7N2)) h... 40 7.1
22gb|AY240916.1| Influenza A virus (A/Chicken/New Jersey/20621/99(... 40 7.1
23gb|AY240914.1| Influenza A virus (A/turkey/VA/67/02(H7N2)) hemag... 40 7.1
24gb|AY240913.1| Influenza A virus (A/turkey/VA/66/02(H7N2)) hemag... 40 7.1
25gb|AY240912.1| Influenza A virus (A/turkey/VA/55/02(H7N2)) hemag... 40 7.1
26gb|AY240910.1| Influenza A virus (A/turkey/NC/11165/02(H7N2)) he... 40 7.1
27gb|AY240908.1| Influenza A virus (A/guineafowl/MA/148081-11/02(H... 40 7.1
28gb|AY240907.1| Influenza A virus (A/Chicken/NY/14858-12/99(H7N2)... 40 7.1
29gb|AY240906.1| Influenza A virus (A/chicken/VA/32/02(H7N2)) hema... 40 7.1
30gb|AY240899.1| Influenza A virus (A/chicken/PA/143586/01(H7N2)) ... 40 7.1
31gb|AY240897.1| Influenza A virus (A/chicken/NY/30749-3/00(H7N2))... 40 7.1
32gb|AY240896.1| Influenza A virus (A/chicken/NY/22409-4/99(H7N2))... 40 7.1
33gb|AY240895.1| Influenza A virus (A/chicken/NY/21586-8/99(H7N2))... 40 7.1
34gb|AY240891.1| Influenza A virus (A/chicken/NY/119256-7/01(H7N2)... 40 7.1
35gb|AY240888.1| Influenza A virus (A/chicken/NJ/608/02(H7N2)) hem... 40 7.1
36gb|AY240887.1| Influenza A virus (A/chicken/NJ/15814-9/99(H7N2))... 40 7.1
37gb|AY240886.1| Influenza A virus (A/chicken/NJ/151244-18/02(H7N2... 40 7.1
38gb|AY240885.1| Influenza A virus (A/chicken/NJ/150383-7/02(H7N2)... 40 7.1
39gb|AY240884.1| Influenza A virus (A/chicken/NJ/118878-5/01(H7N2)... 40 7.1
40gb|AY240883.1| Influenza A virus (A/chicken/FL/90348-4/01(H7N2))... 40 7.1
41gb|AY240882.1| Influenza A virus (A/avian/NY/7729-6/00(H7N2)) he... 40 7.1
42gb|AY240881.1| Influenza A virus (A/avian/NY/81746-5/00(H7N2)) h... 40 7.1
43gb|AY240880.1| Influenza A virus (A/avian/NY/76247-3/00(H7N2)) h... 40 7.1
44gb|AY240879.1| Influenza A virus (A/avian/NY/74211-2/00(H7N2)) h... 40 7.1
45gb|AY240878.1| Influenza A virus (A/avian/NY/70411-12/00(H7N2)) ... 40 7.1
46gb|AY240877.1| Influenza A virus (A/avian/NY/118353-1/01(H7N2)) ... 40 7.1
47emb|AL390741.12| Human DNA sequence from clone RP11-38F19 on chr... 40 7.1
48gb|AY253986.1| Galega orientalis class Ib chitinase mRNA, comple... 40 7.1
49emb|CR848661.5| Zebrafish DNA sequence from clone CH211-187B9 in... 40 7.1
50emb|AL929584.22| Zebrafish DNA sequence from clone CH211-147H21 ... 40 7.1
51emb|BX511034.11| Zebrafish DNA sequence from clone DKEY-57C15 in... 40 7.1
52gb|AC132482.4| Mus musculus BAC clone RP23-27C11 from 12, comple... 40 7.1
53emb|AL929276.7| Zebrafish DNA sequence from clone CH211-59H6, co... 40 7.1
54emb|AL627206.20| Mouse DNA sequence from clone RP23-206H22 on ch... 40 7.1 
>ref|XM_472654.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 609

 Score =  396 bits (200), Expect = e-107
 Identities = 317/356 (89%)
 Strand = Plus / Minus

                                                                       
Query: 165 taccgatctgattgggtcacaatagcctcgacacggtctatggatgcttgcaatcgtcca 224
           ||||||||||| || || || |||||||| || || ||||| |||||||||||||| || 
Sbjct: 605 taccgatctgactgtgttacgatagcctcaactcgatctattgatgcttgcaatcgcccg 546

                                                                       
Query: 225 tagttcatactgaacgcaggttctcctgtcccaacagccccatgaatctcaggaagcaca 284
           |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 545 tagttcatactgaaggcaggttctcctgttccaacagccccatgaatctcaggaagcaca 486

                                                                       
Query: 285 tattcagctttccaaccgagcctcagatcaaaccctggaaacaggttgagttttgatttg 344
           ||||||||| ||||||||| ||||| |||||||||||| |||| | ||||| | ||||||
Sbjct: 485 tattcagctctccaaccgaccctcaaatcaaaccctgggaacatgctgagtgtcgatttg 426

                                                                       
Query: 345 tttcttatgtgagaaacaccatctccccccaagcaagtagtgagcttccacttccatcca 404
           |||||||| ||||| ||||||||||||||||| || |||| |||||||||||||||||||
Sbjct: 425 tttcttatctgagagacaccatctccccccaaacacgtagagagcttccacttccatcca 366

                                                                       
Query: 405 gtcgccttcagttggaaattgtgaccaatgccgacctgaaggttgaggtactttgtaact 464
           || || || || |||||||||||||||||||||||||| || |||||  |||| || |||
Sbjct: 365 gtggcattgagatggaaattgtgaccaatgccgacctgtagattgagaaacttcgttact 306

                                                                   
Query: 465 ggaatcttcttggaaagcagctgtatgtcaccgctgatgggcttgtactggaactt 520
           || |||||||||||||| |||||||| |||||||||||||||||||| ||||||||
Sbjct: 305 ggtatcttcttggaaagaagctgtatatcaccgctgatgggcttgtagtggaactt 250
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  222 bits (112), Expect = 9e-55
 Identities = 163/180 (90%)
 Strand = Plus / Minus

                                                                            
Query: 263      cccatgaatctcaggaagcacatattcagctttccaaccgagcctcagatcaaaccctgg 322
                ||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||||||||
Sbjct: 22221546 cccatgaatctcaggaagcacatattcagctctccaaccgaccctcaaatcaaaccctgg 22221487

                                                                            
Query: 323      aaacaggttgagttttgatttgtttcttatgtgagaaacaccatctccccccaagcaagt 382
                 |||| | ||||| | |||||||||||||| ||||| ||||||||||||||||| || ||
Sbjct: 22221486 gaacatgctgagtgtcgatttgtttcttatctgagagacaccatctccccccaaacacgt 22221427

                                                                            
Query: 383      agtgagcttccacttccatccagtcgccttcagttggaaattgtgaccaatgccgacctg 442
                || ||||||||||||||||||||| || || || ||||||||||||||||||||||||||
Sbjct: 22221426 agagagcttccacttccatccagtggcattgagatggaaattgtgaccaatgccgacctg 22221367



 Score =  103 bits (52), Expect = 6e-19
 Identities = 88/100 (88%)
 Strand = Plus / Minus

                                                                            
Query: 165      taccgatctgattgggtcacaatagcctcgacacggtctatggatgcttgcaatcgtcca 224
                ||||||||||| || || || |||||||| || || ||||| |||||||||||||| || 
Sbjct: 22221781 taccgatctgactgtgttacgatagcctcaactcgatctattgatgcttgcaatcgcccg 22221722

                                                        
Query: 225      tagttcatactgaacgcaggttctcctgtcccaacagccc 264
                |||||||||||||| |||||||||||||| ||||||||||
Sbjct: 22221721 tagttcatactgaaggcaggttctcctgttccaacagccc 22221682



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 55/59 (93%)
 Strand = Plus / Minus

                                                                           
Query: 462      actggaatcttcttggaaagcagctgtatgtcaccgctgatgggcttgtactggaactt 520
                ||||| |||||||||||||| |||||||| |||||||||||||||||||| ||||||||
Sbjct: 22220270 actggtatcttcttggaaagaagctgtatatcaccgctgatgggcttgtagtggaactt 22220212
to top
>emb|AL731593.2|OSJN00235 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027P08,
             complete sequence
          Length = 118959

 Score =  222 bits (112), Expect = 9e-55
 Identities = 163/180 (90%)
 Strand = Plus / Minus

                                                                         
Query: 263   cccatgaatctcaggaagcacatattcagctttccaaccgagcctcagatcaaaccctgg 322
             ||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||||||||
Sbjct: 91407 cccatgaatctcaggaagcacatattcagctctccaaccgaccctcaaatcaaaccctgg 91348

                                                                         
Query: 323   aaacaggttgagttttgatttgtttcttatgtgagaaacaccatctccccccaagcaagt 382
              |||| | ||||| | |||||||||||||| ||||| ||||||||||||||||| || ||
Sbjct: 91347 gaacatgctgagtgtcgatttgtttcttatctgagagacaccatctccccccaaacacgt 91288

                                                                         
Query: 383   agtgagcttccacttccatccagtcgccttcagttggaaattgtgaccaatgccgacctg 442
             || ||||||||||||||||||||| || || || ||||||||||||||||||||||||||
Sbjct: 91287 agagagcttccacttccatccagtggcattgagatggaaattgtgaccaatgccgacctg 91228



 Score =  103 bits (52), Expect = 6e-19
 Identities = 88/100 (88%)
 Strand = Plus / Minus

                                                                         
Query: 165   taccgatctgattgggtcacaatagcctcgacacggtctatggatgcttgcaatcgtcca 224
             ||||||||||| || || || |||||||| || || ||||| |||||||||||||| || 
Sbjct: 91642 taccgatctgactgtgttacgatagcctcaactcgatctattgatgcttgcaatcgcccg 91583

                                                     
Query: 225   tagttcatactgaacgcaggttctcctgtcccaacagccc 264
             |||||||||||||| |||||||||||||| ||||||||||
Sbjct: 91582 tagttcatactgaaggcaggttctcctgttccaacagccc 91543



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 55/59 (93%)
 Strand = Plus / Minus

                                                                        
Query: 462   actggaatcttcttggaaagcagctgtatgtcaccgctgatgggcttgtactggaactt 520
             ||||| |||||||||||||| |||||||| |||||||||||||||||||| ||||||||
Sbjct: 90131 actggtatcttcttggaaagaagctgtatatcaccgctgatgggcttgtagtggaactt 90073
to top
>gb|AY111293.1| Zea mays CL10140_1 mRNA sequence
          Length = 548

 Score =  210 bits (106), Expect = 3e-51
 Identities = 187/216 (86%)
 Strand = Plus / Plus

                                                                       
Query: 221 tccatagttcatactgaacgcaggttctcctgtcccaacagccccatgaatctcaggaag 280
           |||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||
Sbjct: 331 tccatagttcatactgaaggctggttctcctgtgccaacagccccatgaatctcaggaag 390

                                                                       
Query: 281 cacatattcagctttccaaccgagcctcagatcaaaccctggaaacaggttgagttttga 340
           |||||| || |||||||| || | ||||| |||||||||||| |||| | ||||||||||
Sbjct: 391 cacatactctgctttccatccaatcctcaaatcaaaccctgggaacaagctgagttttga 450

                                                                       
Query: 341 tttgtttcttatgtgagaaacaccatctccccccaagcaagtagtgagcttccacttcca 400
            ||||||||||| ||||| |||||||||      | ||||||||  ||||||||||||||
Sbjct: 451 cttgtttcttatctgagacacaccatctnnnnnnaggcaagtagaaagcttccacttcca 510

                                               
Query: 401 tccagtcgccttcagttggaaattgtgaccaatgcc 436
           |||||| || |||||||| |||||| | ||||||||
Sbjct: 511 tccagttgcattcagttgaaaattgcggccaatgcc 546
to top
>dbj|AK154966.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
            full-length enriched library, clone:F630113D21
            product:glutaredoxin 1 (thioltransferase), full insert
            sequence
          Length = 4231

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 471  ttcttggaaagcagctgtatgt 492
            ||||||||||||||||||||||
Sbjct: 3938 ttcttggaaagcagctgtatgt 3917
to top
>gb|AC158356.2| Mus musculus BAC clone RP23-475P8 from chromosome 13, complete sequence
          Length = 210995

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 471    ttcttggaaagcagctgtatgt 492
              ||||||||||||||||||||||
Sbjct: 128701 ttcttggaaagcagctgtatgt 128680
to top
>emb|AL158111.5|CNS01RGL Human chromosome 14 DNA sequence BAC R-106G3 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 172755

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 459    gtaactggaatcttcttggaaa 480
              ||||||||||||||||||||||
Sbjct: 133657 gtaactggaatcttcttggaaa 133678
to top
>emb|AL133449.5|CNS01DV3 Human chromosome 14 DNA sequence BAC R-111J13 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 148439

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 459   gtaactggaatcttcttggaaa 480
             ||||||||||||||||||||||
Sbjct: 46484 gtaactggaatcttcttggaaa 46505
to top
>emb|AL672047.10| Mouse DNA sequence from clone RP23-316B4 on chromosome X, complete
              sequence
          Length = 183697

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 463    ctggaatcttcttggaaagcagctg 487
              ||||||| |||||||||||||||||
Sbjct: 163574 ctggaatgttcttggaaagcagctg 163598
to top
>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome
          Length = 7215267

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 308     cagatcaaaccctggaaacag 328
               |||||||||||||||||||||
Sbjct: 3343275 cagatcaaaccctggaaacag 3343255
to top
>emb|AL672170.11| Mouse DNA sequence from clone RP23-435C17 on chromosome X, complete
              sequence
          Length = 205023

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 18     aataaagtttgctcatttctg 38
              |||||||||||||||||||||
Sbjct: 197361 aataaagtttgctcatttctg 197341
to top
>gb|AY831670.1| Influenza A virus (A/chicken/MD/MINH MA/2004(H7N2)) hemagglutinin
            gene, complete cds
          Length = 1659

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 19   ataaagtttgctcatttctg 38
            ||||||||||||||||||||
Sbjct: 1350 ataaagtttgctcatttctg 1331
to top
>gb|AY831669.1| Influenza A virus (A/chicken/DE/VIVA/2004(H7N2)) hemagglutinin gene,
            complete cds
          Length = 1659

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 19   ataaagtttgctcatttctg 38
            ||||||||||||||||||||
Sbjct: 1350 ataaagtttgctcatttctg 1331
to top
>gb|AY831668.1| Influenza A virus (A/chicken/DE/HOBO/2004(H7N2)) hemagglutinin gene,
            complete cds
          Length = 1659

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 19   ataaagtttgctcatttctg 38
            ||||||||||||||||||||
Sbjct: 1350 ataaagtttgctcatttctg 1331
to top
>gb|AC158957.2| Mus musculus chromosome 15, clone RP23-27P5, complete sequence
          Length = 187390

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 230   catactgaacgcaggttctc 249
             ||||||||||||||||||||
Sbjct: 69840 catactgaacgcaggttctc 69821
to top
>gb|AC138232.10| Mus musculus chromosome 1, clone RP23-39C19, complete sequence
          Length = 199733

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 330   ttgagttttgatttgtttct 349
             ||||||||||||||||||||
Sbjct: 64075 ttgagttttgatttgtttct 64094
to top
>gb|AC132331.3| Mus musculus BAC clone RP24-217D10 from chromosome 12, complete sequence
          Length = 176940

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 361    caccatctccccccaagcaa 380
              ||||||||||||||||||||
Sbjct: 160773 caccatctccccccaagcaa 160754
to top
>gb|DQ480516.1| Hepatitis C virus subtype 6a strain 6a61, complete genome
          Length = 9358

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 24   gtttgctcatttctgtacatcggg 47
            |||||||||| |||||||||||||
Sbjct: 1109 gtttgctcatctctgtacatcggg 1132
to top
>gb|AY240925.1| Influenza A virus (A/avian/NY/73063-6/00(H7N2)) hemagglutinin (HA)
            gene, complete cds
          Length = 1670

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 19   ataaagtttgctcatttctg 38
            ||||||||||||||||||||
Sbjct: 1350 ataaagtttgctcatttctg 1331
to top
>gb|AY240920.1| Influenza A virus (A/chicken/NY/34173-3/99(H7N2)) hemagglutinin (HA)
            gene, complete cds
          Length = 1670

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 19   ataaagtttgctcatttctg 38
            ||||||||||||||||||||
Sbjct: 1350 ataaagtttgctcatttctg 1331
to top
>gb|AY240918.1| Influenza A virus (A/chicken/NJ/15827/99(H7N2)) hemagglutinin (HA)
            gene, partial cds
          Length = 1669

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 19   ataaagtttgctcatttctg 38
            ||||||||||||||||||||
Sbjct: 1350 ataaagtttgctcatttctg 1331
to top
>gb|AY240916.1| Influenza A virus (A/Chicken/New Jersey/20621/99(H7N2)) hemagglutinin
            (HA) gene, complete cds
          Length = 1670

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 19   ataaagtttgctcatttctg 38
            ||||||||||||||||||||
Sbjct: 1350 ataaagtttgctcatttctg 1331
to top
>gb|AY240914.1| Influenza A virus (A/turkey/VA/67/02(H7N2)) hemagglutinin (HA) gene,
            complete cds
          Length = 1668

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 19   ataaagtttgctcatttctg 38
            ||||||||||||||||||||
Sbjct: 1350 ataaagtttgctcatttctg 1331
to top
>gb|AY240913.1| Influenza A virus (A/turkey/VA/66/02(H7N2)) hemagglutinin (HA) gene,
            complete cds
          Length = 1670

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 19   ataaagtttgctcatttctg 38
            ||||||||||||||||||||
Sbjct: 1352 ataaagtttgctcatttctg 1333
to top
>gb|AY240912.1| Influenza A virus (A/turkey/VA/55/02(H7N2)) hemagglutinin (HA) gene,
            complete cds
          Length = 1670

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 19   ataaagtttgctcatttctg 38
            ||||||||||||||||||||
Sbjct: 1350 ataaagtttgctcatttctg 1331
to top
>gb|AY240910.1| Influenza A virus (A/turkey/NC/11165/02(H7N2)) hemagglutinin (HA)
            gene, complete cds
          Length = 1670

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 19   ataaagtttgctcatttctg 38
            ||||||||||||||||||||
Sbjct: 1350 ataaagtttgctcatttctg 1331
to top
>gb|AY240908.1| Influenza A virus (A/guineafowl/MA/148081-11/02(H7N2)) hemagglutinin
            (HA) gene, complete cds
          Length = 1672

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 19   ataaagtttgctcatttctg 38
            ||||||||||||||||||||
Sbjct: 1352 ataaagtttgctcatttctg 1333
to top
>gb|AY240907.1| Influenza A virus (A/Chicken/NY/14858-12/99(H7N2)) hemagglutinin (HA)
            gene, complete cds
          Length = 1673

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 19   ataaagtttgctcatttctg 38
            ||||||||||||||||||||
Sbjct: 1353 ataaagtttgctcatttctg 1334
to top
>gb|AY240906.1| Influenza A virus (A/chicken/VA/32/02(H7N2)) hemagglutinin (HA) gene,
            complete cds
          Length = 1670

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 19   ataaagtttgctcatttctg 38
            ||||||||||||||||||||
Sbjct: 1350 ataaagtttgctcatttctg 1331
to top
>gb|AY240899.1| Influenza A virus (A/chicken/PA/143586/01(H7N2)) hemagglutinin (HA)
            gene, partial cds
          Length = 1661

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 19   ataaagtttgctcatttctg 38
            ||||||||||||||||||||
Sbjct: 1341 ataaagtttgctcatttctg 1322
to top
>gb|AY240897.1| Influenza A virus (A/chicken/NY/30749-3/00(H7N2)) hemagglutinin (HA)
            gene, complete cds
          Length = 1673

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 19   ataaagtttgctcatttctg 38
            ||||||||||||||||||||
Sbjct: 1353 ataaagtttgctcatttctg 1334
to top
>gb|AY240896.1| Influenza A virus (A/chicken/NY/22409-4/99(H7N2)) hemagglutinin (HA)
            gene, complete cds
          Length = 1673

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 19   ataaagtttgctcatttctg 38
            ||||||||||||||||||||
Sbjct: 1353 ataaagtttgctcatttctg 1334
to top
>gb|AY240895.1| Influenza A virus (A/chicken/NY/21586-8/99(H7N2)) hemagglutinin (HA)
            gene, complete cds
          Length = 1673

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 19   ataaagtttgctcatttctg 38
            ||||||||||||||||||||
Sbjct: 1353 ataaagtttgctcatttctg 1334
to top
>gb|AY240891.1| Influenza A virus (A/chicken/NY/119256-7/01(H7N2)) hemagglutinin (HA)
            gene, complete cds
          Length = 1670

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 19   ataaagtttgctcatttctg 38
            ||||||||||||||||||||
Sbjct: 1350 ataaagtttgctcatttctg 1331
to top
>gb|AY240888.1| Influenza A virus (A/chicken/NJ/608/02(H7N2)) hemagglutinin (HA)
            gene, complete cds
          Length = 1670

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 19   ataaagtttgctcatttctg 38
            ||||||||||||||||||||
Sbjct: 1350 ataaagtttgctcatttctg 1331
to top
>gb|AY240887.1| Influenza A virus (A/chicken/NJ/15814-9/99(H7N2)) hemagglutinin (HA)
            gene, complete cds
          Length = 1674

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 19   ataaagtttgctcatttctg 38
            ||||||||||||||||||||
Sbjct: 1353 ataaagtttgctcatttctg 1334
to top
>gb|AY240886.1| Influenza A virus (A/chicken/NJ/151244-18/02(H7N2)) hemagglutinin
            (HA) gene, complete cds
          Length = 1670

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 19   ataaagtttgctcatttctg 38
            ||||||||||||||||||||
Sbjct: 1350 ataaagtttgctcatttctg 1331
to top
>gb|AY240885.1| Influenza A virus (A/chicken/NJ/150383-7/02(H7N2)) hemagglutinin (HA)
            gene, complete cds
          Length = 1670

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 19   ataaagtttgctcatttctg 38
            ||||||||||||||||||||
Sbjct: 1350 ataaagtttgctcatttctg 1331
to top
>gb|AY240884.1| Influenza A virus (A/chicken/NJ/118878-5/01(H7N2)) hemagglutinin (HA)
            gene, complete cds
          Length = 1670

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 19   ataaagtttgctcatttctg 38
            ||||||||||||||||||||
Sbjct: 1350 ataaagtttgctcatttctg 1331
to top
>gb|AY240883.1| Influenza A virus (A/chicken/FL/90348-4/01(H7N2)) hemagglutinin (HA)
            gene, complete cds
          Length = 1676

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 19   ataaagtttgctcatttctg 38
            ||||||||||||||||||||
Sbjct: 1356 ataaagtttgctcatttctg 1337
to top
>gb|AY240882.1| Influenza A virus (A/avian/NY/7729-6/00(H7N2)) hemagglutinin (HA)
            gene, complete cds
          Length = 1676

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 19   ataaagtttgctcatttctg 38
            ||||||||||||||||||||
Sbjct: 1356 ataaagtttgctcatttctg 1337
to top
>gb|AY240881.1| Influenza A virus (A/avian/NY/81746-5/00(H7N2)) hemagglutinin (HA)
            gene, complete cds
          Length = 1676

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 19   ataaagtttgctcatttctg 38
            ||||||||||||||||||||
Sbjct: 1356 ataaagtttgctcatttctg 1337
to top
>gb|AY240880.1| Influenza A virus (A/avian/NY/76247-3/00(H7N2)) hemagglutinin (HA)
            gene, complete cds
          Length = 1676

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 19   ataaagtttgctcatttctg 38
            ||||||||||||||||||||
Sbjct: 1356 ataaagtttgctcatttctg 1337
to top
>gb|AY240879.1| Influenza A virus (A/avian/NY/74211-2/00(H7N2)) hemagglutinin (HA)
            gene, complete cds
          Length = 1676

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 19   ataaagtttgctcatttctg 38
            ||||||||||||||||||||
Sbjct: 1356 ataaagtttgctcatttctg 1337
to top
>gb|AY240878.1| Influenza A virus (A/avian/NY/70411-12/00(H7N2)) hemagglutinin (HA)
            gene, complete cds
          Length = 1670

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 19   ataaagtttgctcatttctg 38
            ||||||||||||||||||||
Sbjct: 1350 ataaagtttgctcatttctg 1331
to top
>gb|AY240877.1| Influenza A virus (A/avian/NY/118353-1/01(H7N2)) hemagglutinin (HA)
            gene, complete cds
          Length = 1670

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 19   ataaagtttgctcatttctg 38
            ||||||||||||||||||||
Sbjct: 1350 ataaagtttgctcatttctg 1331
to top
>emb|AL390741.12| Human DNA sequence from clone RP11-38F19 on chromosome 6 Contains the
             DSCR1L1 gene for Down syndrome critical region gene 1-like
             1 (MCIP2, ZAKI-4) and a novel gene, complete sequence
          Length = 128461

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 16    aaaataaagtttgctcatttctgt 39
             |||| |||||||||||||||||||
Sbjct: 86765 aaaaaaaagtttgctcatttctgt 86742
to top
>gb|AY253986.1| Galega orientalis class Ib chitinase mRNA, complete cds
          Length = 1149

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 457  ttgtaactggaatcttcttg 476
            ||||||||||||||||||||
Sbjct: 1068 ttgtaactggaatcttcttg 1087
to top
>emb|CR848661.5| Zebrafish DNA sequence from clone CH211-187B9 in linkage group 15,
             complete sequence
          Length = 149649

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 333   agttttgatttgtttcttat 352
             ||||||||||||||||||||
Sbjct: 70874 agttttgatttgtttcttat 70855
to top
>emb|AL929584.22| Zebrafish DNA sequence from clone CH211-147H21 in linkage group 23,
             complete sequence
          Length = 159923

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 333   agttttgatttgtttcttat 352
             ||||||||||||||||||||
Sbjct: 51553 agttttgatttgtttcttat 51534
to top
>emb|BX511034.11| Zebrafish DNA sequence from clone DKEY-57C15 in linkage group 22,
             complete sequence
          Length = 284624

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 331   tgagttttgatttgtttctt 350
             ||||||||||||||||||||
Sbjct: 39230 tgagttttgatttgtttctt 39211
to top
>gb|AC132482.4| Mus musculus BAC clone RP23-27C11 from 12, complete sequence
          Length = 175487

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 361   caccatctccccccaagcaa 380
             ||||||||||||||||||||
Sbjct: 20914 caccatctccccccaagcaa 20895
to top
>emb|AL929276.7| Zebrafish DNA sequence from clone CH211-59H6, complete sequence
          Length = 210630

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 331    tgagttttgatttgtttctt 350
              ||||||||||||||||||||
Sbjct: 137141 tgagttttgatttgtttctt 137122
to top
>emb|AL627206.20| Mouse DNA sequence from clone RP23-206H22 on chromosome 4, complete
             sequence
          Length = 158781

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 328   ggttgagttttgatttgttt 347
             ||||||||||||||||||||
Sbjct: 44921 ggttgagttttgatttgttt 44902


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,652,790
Number of Sequences: 3902068
Number of extensions: 4652790
Number of successful extensions: 82782
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 82676
Number of HSP's gapped (non-prelim): 106
length of query: 523
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 500
effective length of database: 17,143,297,704
effective search space: 8571648852000
effective search space used: 8571648852000
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top