ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd22i14
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_474067.1| Oryza sativa (japonica cultivar-group), predic... 167 5e-38
2emb|AL731607.3|OSJN00250 Oryza sativa genomic DNA, chromosome 4,... 167 5e-38
3emb|AL606455.3|OSJN00015 Oryza sativa genomic DNA, chromosome 4,... 167 5e-38
4dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 167 5e-38
5dbj|AK109401.2| Oryza sativa (japonica cultivar-group) cDNA clon... 167 5e-38
6dbj|AK059892.1| Oryza sativa (japonica cultivar-group) cDNA clon... 167 5e-38
7emb|AL732339.3| Oryza sativa genomic DNA, chromosome 4, BAC clon... 167 5e-38
8emb|AL442112.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 167 5e-38
9gb|AY105883.1| Zea mays PCO068227 mRNA sequence 82 3e-12
10gb|AY108401.1| Zea mays PCO068228 mRNA sequence 80 1e-11
11gb|BT016343.1| Zea mays clone Contig176 mRNA sequence 72 2e-09
12gb|AY111947.1| Zea mays CL2727_-4 mRNA sequence 44 0.55
13gb|AE015451.1| Pseudomonas putida KT2440 complete genome 44 0.55
14gb|CP000089.1| Dechloromonas aromatica RCB, complete genome 42 2.2
15emb|BX640447.1| Bordetella bronchiseptica strain RB50, complete ... 42 2.2
16emb|BX640428.1| Bordetella parapertussis strain 12822, complete ... 42 2.2
17emb|BX640417.1| Bordetella pertussis strain Tohama I, complete g... 42 2.2
18dbj|AK062620.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.2
19gb|AY663907.1| Uncultured Bacteroides sp. clone JL-ECS-C37 16S r... 40 8.5
20gb|AF376159.1| Uncultured bacterium ckncm255-c8e3 16S ribosomal ... 40 8.5
21gb|AF376162.1| Uncultured bacterium ckncm258-c8g5 16S ribosomal ... 40 8.5
22gb|AF376163.1| Uncultured bacterium ckncm259-c8h12 16S ribosomal... 40 8.5
23gb|AF376164.1| Uncultured bacterium ckncm260-c8d3 16S ribosomal ... 40 8.5
24gb|AF376165.1| Uncultured bacterium ckncm261-m8g11 16S ribosomal... 40 8.5
25gb|AF376166.1| Uncultured bacterium ckncm262-c8b6 16S ribosomal ... 40 8.5
26gb|AF376167.1| Uncultured bacterium ckncm263-2m8f1 16S ribosomal... 40 8.5
27gb|AF376177.1| Uncultured bacterium ckncm273-2m8f2 16S ribosomal... 40 8.5
28gb|DQ456013.1| Uncultured bacterium clone CFT112C5 16S ribosomal... 40 8.5
29gb|DQ455998.1| Uncultured bacterium clone CFT112B1 16S ribosomal... 40 8.5
30gb|DQ455985.1| Uncultured bacterium clone CFT111H7 16S ribosomal... 40 8.5
31gb|DQ455942.1| Uncultured bacterium clone CFT111D10 16S ribosoma... 40 8.5
32gb|DQ455859.1| Uncultured bacterium clone CFT19D7 16S ribosomal ... 40 8.5
33emb|Z83838.2|HS127B20 Human DNA sequence from clone RP1-127B20 o... 40 8.5
34emb|AL358473.10| Human DNA sequence from clone RP11-168O16 on ch... 40 8.5
35gb|AY729961.1| Megamonas hypermegale isolate W2 16S ribosomal RN... 40 8.5
36gb|DQ113693.1| Uncultured bacterium clone C8-17 16S ribosomal RN... 40 8.5
37ref|XM_680154.1| PREDICTED: Danio rerio similar to Mdm4, transfo... 40 8.5
38gb|DQ057390.1| uncultured bacterium clone cc337 16S ribosomal RN... 40 8.5
39dbj|AB064932.1| Human intestinal firmicute CS13 gene for 16S rRN... 40 8.5
40dbj|AB064931.1| Human intestinal firmicute CB15 gene for 16S rRN... 40 8.5
41dbj|AB064851.1| Uncultured Gram-positive bacterium gene for 16S ... 40 8.5
42dbj|AB064850.1| Uncultured Gram-positive bacterium gene for 16S ... 40 8.5
43dbj|AB064837.1| Uncultured Gram-positive bacterium gene for 16S ... 40 8.5
44gb|AC139931.5| Homo sapiens 12 BAC RP11-43A22 (Roswell Park Canc... 40 8.5
45gb|AY669251.1| Uncultured Megamonas sp. clone CA915 16S ribosoma... 40 8.5
46emb|BX465210.7| Zebrafish DNA sequence from clone CH211-266A5 in... 40 8.5
47emb|AJ420107.1|MHY420107 Megamonas hypermegale 16S rRNA gene, st... 40 8.5 
>ref|XM_474067.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 756

 Score =  167 bits (84), Expect = 5e-38
 Identities = 159/184 (86%)
 Strand = Plus / Minus

                                                                       
Query: 251 gagagcctcggacagcatcatagctcctgcggagaaatagctgctcgtcacgatggtgtt 310
           |||||| || |||||||||||||||||||| |||||||||||||| |||| ||||   ||
Sbjct: 702 gagagcatcagacagcatcatagctcctgcagagaaatagctgctggtcatgatgccatt 643

                                                                       
Query: 311 cataaccttgaccgcggttcttccggtggcagtggcgacggtcttggtcgtctcggtaac 370
           || |||||| || || |||||||| ||||| |||||||||||||||||||||||||  ||
Sbjct: 642 cacaaccttaactgctgttcttcctgtggcggtggcgacggtcttggtcgtctcggatac 583

                                                                       
Query: 371 atggtatgtctcgtccactgatctgattgcgccaacaccagcactgactctgtcagtcag 430
            ||||||||||| ||||| ||||||||||| |||||||| || ||||| ||||| || ||
Sbjct: 582 gtggtatgtctcatccaccgatctgattgcaccaacaccggcgctgaccctgtcggttag 523

               
Query: 431 gccg 434
           ||||
Sbjct: 522 gccg 519



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 164/202 (81%), Gaps = 1/202 (0%)
 Strand = Plus / Minus

                                                                       
Query: 414 ctgactctgtcagtcaggccgagcctcctgctcagctctgcagcctttgctgccgcagat 473
           ||||| ||||| || ||||| | |||| |||||||||| |||||||| ||||| ||||  
Sbjct: 518 ctgaccctgtcggttaggccaatcctcttgctcagctccgcagccttggctgcggcagtc 459

                                                                       
Query: 474 ccagataactggtgggactcgtcgaaagctctagccctggacaatgcgtccttgctcagt 533
            | | || ||| |||||||| || || ||||||||||||| || ||| |||||||| |||
Sbjct: 458 gctgttacctgatgggactcatcaaaggctctagccctggccagtgcatccttgctgagt 399

                                                                       
Query: 534 atgtatcccctcgacagcatcgtctt-acgacgtcctgagccactgtcaaagcctcctgt 592
           | ||||||||| |  ||||| ||||| || || |||||||| |  |||||||| || |||
Sbjct: 398 acgtatccccttgctagcattgtcttcacaacatcctgagcaatcgtcaaagcttcttgt 339

                                 
Query: 593 ggagtggcgttgaactggcatg 614
           |||||||  |||||||||||||
Sbjct: 338 ggagtggaattgaactggcatg 317
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>emb|AL731607.3|OSJN00250 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0063C18,
             complete sequence
          Length = 150416

 Score =  167 bits (84), Expect = 5e-38
 Identities = 159/184 (86%)
 Strand = Plus / Plus

                                                                         
Query: 251   gagagcctcggacagcatcatagctcctgcggagaaatagctgctcgtcacgatggtgtt 310
             |||||| || |||||||||||||||||||| |||||||||||||| |||| ||||   ||
Sbjct: 27779 gagagcatcagacagcatcatagctcctgcagagaaatagctgctggtcatgatgccatt 27838

                                                                         
Query: 311   cataaccttgaccgcggttcttccggtggcagtggcgacggtcttggtcgtctcggtaac 370
             || |||||| || || |||||||| ||||| |||||||||||||||||||||||||  ||
Sbjct: 27839 cacaaccttaactgctgttcttcctgtggcggtggcgacggtcttggtcgtctcggatac 27898

                                                                         
Query: 371   atggtatgtctcgtccactgatctgattgcgccaacaccagcactgactctgtcagtcag 430
              ||||||||||| ||||| ||||||||||| |||||||| || ||||| ||||| || ||
Sbjct: 27899 gtggtatgtctcatccaccgatctgattgcaccaacaccggcgctgaccctgtcggttag 27958

                 
Query: 431   gccg 434
             ||||
Sbjct: 27959 gccg 27962



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 164/202 (81%), Gaps = 1/202 (0%)
 Strand = Plus / Plus

                                                                         
Query: 414   ctgactctgtcagtcaggccgagcctcctgctcagctctgcagcctttgctgccgcagat 473
             ||||| ||||| || ||||| | |||| |||||||||| |||||||| ||||| ||||  
Sbjct: 27963 ctgaccctgtcggttaggccaatcctcttgctcagctccgcagccttggctgcggcagtc 28022

                                                                         
Query: 474   ccagataactggtgggactcgtcgaaagctctagccctggacaatgcgtccttgctcagt 533
              | | || ||| |||||||| || || ||||||||||||| || ||| |||||||| |||
Sbjct: 28023 gctgttacctgatgggactcatcaaaggctctagccctggccagtgcatccttgctgagt 28082

                                                                         
Query: 534   atgtatcccctcgacagcatcgtctt-acgacgtcctgagccactgtcaaagcctcctgt 592
             | ||||||||| |  ||||| ||||| || || |||||||| |  |||||||| || |||
Sbjct: 28083 acgtatccccttgctagcattgtcttcacaacatcctgagcaatcgtcaaagcttcttgt 28142

                                   
Query: 593   ggagtggcgttgaactggcatg 614
             |||||||  |||||||||||||
Sbjct: 28143 ggagtggaattgaactggcatg 28164
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>emb|AL606455.3|OSJN00015 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0079B02,
             complete sequence
          Length = 126659

 Score =  167 bits (84), Expect = 5e-38
 Identities = 159/184 (86%)
 Strand = Plus / Plus

                                                                         
Query: 251   gagagcctcggacagcatcatagctcctgcggagaaatagctgctcgtcacgatggtgtt 310
             |||||| || |||||||||||||||||||| |||||||||||||| |||| ||||   ||
Sbjct: 63365 gagagcatcagacagcatcatagctcctgcagagaaatagctgctggtcatgatgccatt 63424

                                                                         
Query: 311   cataaccttgaccgcggttcttccggtggcagtggcgacggtcttggtcgtctcggtaac 370
             || |||||| || || |||||||| ||||| |||||||||||||||||||||||||  ||
Sbjct: 63425 cacaaccttaactgctgttcttcctgtggcggtggcgacggtcttggtcgtctcggatac 63484

                                                                         
Query: 371   atggtatgtctcgtccactgatctgattgcgccaacaccagcactgactctgtcagtcag 430
              ||||||||||| ||||| ||||||||||| |||||||| || ||||| ||||| || ||
Sbjct: 63485 gtggtatgtctcatccaccgatctgattgcaccaacaccggcgctgaccctgtcggttag 63544

                 
Query: 431   gccg 434
             ||||
Sbjct: 63545 gccg 63548



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 164/202 (81%), Gaps = 1/202 (0%)
 Strand = Plus / Plus

                                                                         
Query: 414   ctgactctgtcagtcaggccgagcctcctgctcagctctgcagcctttgctgccgcagat 473
             ||||| ||||| || ||||| | |||| |||||||||| |||||||| ||||| ||||  
Sbjct: 63549 ctgaccctgtcggttaggccaatcctcttgctcagctccgcagccttggctgcggcagtc 63608

                                                                         
Query: 474   ccagataactggtgggactcgtcgaaagctctagccctggacaatgcgtccttgctcagt 533
              | | || ||| |||||||| || || ||||||||||||| || ||| |||||||| |||
Sbjct: 63609 gctgttacctgatgggactcatcaaaggctctagccctggccagtgcatccttgctgagt 63668

                                                                         
Query: 534   atgtatcccctcgacagcatcgtctt-acgacgtcctgagccactgtcaaagcctcctgt 592
             | ||||||||| |  ||||| ||||| || || |||||||| |  |||||||| || |||
Sbjct: 63669 acgtatccccttgctagcattgtcttcacaacatcctgagcaatcgtcaaagcttcttgt 63728

                                   
Query: 593   ggagtggcgttgaactggcatg 614
             |||||||  |||||||||||||
Sbjct: 63729 ggagtggaattgaactggcatg 63750
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  167 bits (84), Expect = 5e-38
 Identities = 159/184 (86%)
 Strand = Plus / Plus

                                                                            
Query: 251      gagagcctcggacagcatcatagctcctgcggagaaatagctgctcgtcacgatggtgtt 310
                |||||| || |||||||||||||||||||| |||||||||||||| |||| ||||   ||
Sbjct: 32668344 gagagcatcagacagcatcatagctcctgcagagaaatagctgctggtcatgatgccatt 32668403

                                                                            
Query: 311      cataaccttgaccgcggttcttccggtggcagtggcgacggtcttggtcgtctcggtaac 370
                || |||||| || || |||||||| ||||| |||||||||||||||||||||||||  ||
Sbjct: 32668404 cacaaccttaactgctgttcttcctgtggcggtggcgacggtcttggtcgtctcggatac 32668463

                                                                            
Query: 371      atggtatgtctcgtccactgatctgattgcgccaacaccagcactgactctgtcagtcag 430
                 ||||||||||| ||||| ||||||||||| |||||||| || ||||| ||||| || ||
Sbjct: 32668464 gtggtatgtctcatccaccgatctgattgcaccaacaccggcgctgaccctgtcggttag 32668523

                    
Query: 431      gccg 434
                ||||
Sbjct: 32668524 gccg 32668527



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 164/202 (81%), Gaps = 1/202 (0%)
 Strand = Plus / Plus

                                                                            
Query: 414      ctgactctgtcagtcaggccgagcctcctgctcagctctgcagcctttgctgccgcagat 473
                ||||| ||||| || ||||| | |||| |||||||||| |||||||| ||||| ||||  
Sbjct: 32668528 ctgaccctgtcggttaggccaatcctcttgctcagctccgcagccttggctgcggcagtc 32668587

                                                                            
Query: 474      ccagataactggtgggactcgtcgaaagctctagccctggacaatgcgtccttgctcagt 533
                 | | || ||| |||||||| || || ||||||||||||| || ||| |||||||| |||
Sbjct: 32668588 gctgttacctgatgggactcatcaaaggctctagccctggccagtgcatccttgctgagt 32668647

                                                                            
Query: 534      atgtatcccctcgacagcatcgtctt-acgacgtcctgagccactgtcaaagcctcctgt 592
                | ||||||||| |  ||||| ||||| || || |||||||| |  |||||||| || |||
Sbjct: 32668648 acgtatccccttgctagcattgtcttcacaacatcctgagcaatcgtcaaagcttcttgt 32668707

                                      
Query: 593      ggagtggcgttgaactggcatg 614
                |||||||  |||||||||||||
Sbjct: 32668708 ggagtggaattgaactggcatg 32668729
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>dbj|AK109401.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-G01, full
           insert sequence
          Length = 1113

 Score =  167 bits (84), Expect = 5e-38
 Identities = 159/184 (86%)
 Strand = Plus / Minus

                                                                       
Query: 251 gagagcctcggacagcatcatagctcctgcggagaaatagctgctcgtcacgatggtgtt 310
           |||||| || |||||||||||||||||||| |||||||||||||| |||| ||||   ||
Sbjct: 810 gagagcatcagacagcatcatagctcctgcagagaaatagctgctggtcatgatgccatt 751

                                                                       
Query: 311 cataaccttgaccgcggttcttccggtggcagtggcgacggtcttggtcgtctcggtaac 370
           || |||||| || || |||||||| ||||| |||||||||||||||||||||||||  ||
Sbjct: 750 cacaaccttaactgctgttcttcctgtggcggtggcgacggtcttggtcgtctcggatac 691

                                                                       
Query: 371 atggtatgtctcgtccactgatctgattgcgccaacaccagcactgactctgtcagtcag 430
            ||||||||||| ||||| ||||||||||| |||||||| || ||||| ||||| || ||
Sbjct: 690 gtggtatgtctcatccaccgatctgattgcaccaacaccggcgctgaccctgtcggttag 631

               
Query: 431 gccg 434
           ||||
Sbjct: 630 gccg 627



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 164/202 (81%), Gaps = 1/202 (0%)
 Strand = Plus / Minus

                                                                       
Query: 414 ctgactctgtcagtcaggccgagcctcctgctcagctctgcagcctttgctgccgcagat 473
           ||||| ||||| || ||||| | |||| |||||||||| |||||||| ||||| ||||  
Sbjct: 626 ctgaccctgtcggttaggccaatcctcttgctcagctccgcagccttggctgcggcagtc 567

                                                                       
Query: 474 ccagataactggtgggactcgtcgaaagctctagccctggacaatgcgtccttgctcagt 533
            | | || ||| |||||||| || || ||||||||||||| || ||| |||||||| |||
Sbjct: 566 gctgttacctgatgggactcatcaaaggctctagccctggccagtgcatccttgctgagt 507

                                                                       
Query: 534 atgtatcccctcgacagcatcgtctt-acgacgtcctgagccactgtcaaagcctcctgt 592
           | ||||||||| |  ||||| ||||| || || |||||||| |  |||||||| || |||
Sbjct: 506 acgtatccccttgctagcattgtcttcacaacatcctgagcaatcgtcaaagcttcttgt 447

                                 
Query: 593 ggagtggcgttgaactggcatg 614
           |||||||  |||||||||||||
Sbjct: 446 ggagtggaattgaactggcatg 425
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>dbj|AK059892.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-208-D10, full
           insert sequence
          Length = 927

 Score =  167 bits (84), Expect = 5e-38
 Identities = 159/184 (86%)
 Strand = Plus / Minus

                                                                       
Query: 251 gagagcctcggacagcatcatagctcctgcggagaaatagctgctcgtcacgatggtgtt 310
           |||||| || |||||||||||||||||||| |||||||||||||| |||| ||||   ||
Sbjct: 513 gagagcatcagacagcatcatagctcctgcagagaaatagctgctggtcatgatgccatt 454

                                                                       
Query: 311 cataaccttgaccgcggttcttccggtggcagtggcgacggtcttggtcgtctcggtaac 370
           || |||||| || || |||||||| ||||| |||||||||||||||||||||||||  ||
Sbjct: 453 cacaaccttaactgctgttcttcctgtggcggtggcgacggtcttggtcgtctcggatac 394

                                                                       
Query: 371 atggtatgtctcgtccactgatctgattgcgccaacaccagcactgactctgtcagtcag 430
            ||||||||||| ||||| ||||||||||| |||||||| || ||||| ||||| || ||
Sbjct: 393 gtggtatgtctcatccaccgatctgattgcaccaacaccggcgctgaccctgtcggttag 334

               
Query: 431 gccg 434
           ||||
Sbjct: 333 gccg 330



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 164/202 (81%), Gaps = 1/202 (0%)
 Strand = Plus / Minus

                                                                       
Query: 414 ctgactctgtcagtcaggccgagcctcctgctcagctctgcagcctttgctgccgcagat 473
           ||||| ||||| || ||||| | |||| |||||||||| |||||||| ||||| ||||  
Sbjct: 329 ctgaccctgtcggttaggccaatcctcttgctcagctccgcagccttggctgcggcagtc 270

                                                                       
Query: 474 ccagataactggtgggactcgtcgaaagctctagccctggacaatgcgtccttgctcagt 533
            | | || ||| |||||||| || || ||||||||||||| || ||| |||||||| |||
Sbjct: 269 gctgttacctgatgggactcatcaaaggctctagccctggccagtgcatccttgctgagt 210

                                                                       
Query: 534 atgtatcccctcgacagcatcgtctt-acgacgtcctgagccactgtcaaagcctcctgt 592
           | ||||||||| |  ||||| ||||| || || |||||||| |  |||||||| || |||
Sbjct: 209 acgtatccccttgctagcattgtcttcacaacatcctgagcaatcgtcaaagcttcttgt 150

                                 
Query: 593 ggagtggcgttgaactggcatg 614
           |||||||  |||||||||||||
Sbjct: 149 ggagtggaattgaactggcatg 128
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>emb|AL732339.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: B0414F07, complete
             sequence
          Length = 50928

 Score =  167 bits (84), Expect = 5e-38
 Identities = 159/184 (86%)
 Strand = Plus / Plus

                                                                         
Query: 251   gagagcctcggacagcatcatagctcctgcggagaaatagctgctcgtcacgatggtgtt 310
             |||||| || |||||||||||||||||||| |||||||||||||| |||| ||||   ||
Sbjct: 45626 gagagcatcagacagcatcatagctcctgcagagaaatagctgctggtcatgatgccatt 45685

                                                                         
Query: 311   cataaccttgaccgcggttcttccggtggcagtggcgacggtcttggtcgtctcggtaac 370
             || |||||| || || |||||||| ||||| |||||||||||||||||||||||||  ||
Sbjct: 45686 cacaaccttaactgctgttcttcctgtggcggtggcgacggtcttggtcgtctcggatac 45745

                                                                         
Query: 371   atggtatgtctcgtccactgatctgattgcgccaacaccagcactgactctgtcagtcag 430
              ||||||||||| ||||| ||||||||||| |||||||| || ||||| ||||| || ||
Sbjct: 45746 gtggtatgtctcatccaccgatctgattgcaccaacaccggcgctgaccctgtcggttag 45805

                 
Query: 431   gccg 434
             ||||
Sbjct: 45806 gccg 45809



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 164/202 (81%), Gaps = 1/202 (0%)
 Strand = Plus / Plus

                                                                         
Query: 414   ctgactctgtcagtcaggccgagcctcctgctcagctctgcagcctttgctgccgcagat 473
             ||||| ||||| || ||||| | |||| |||||||||| |||||||| ||||| ||||  
Sbjct: 45810 ctgaccctgtcggttaggccaatcctcttgctcagctccgcagccttggctgcggcagtc 45869

                                                                         
Query: 474   ccagataactggtgggactcgtcgaaagctctagccctggacaatgcgtccttgctcagt 533
              | | || ||| |||||||| || || ||||||||||||| || ||| |||||||| |||
Sbjct: 45870 gctgttacctgatgggactcatcaaaggctctagccctggccagtgcatccttgctgagt 45929

                                                                         
Query: 534   atgtatcccctcgacagcatcgtctt-acgacgtcctgagccactgtcaaagcctcctgt 592
             | ||||||||| |  ||||| ||||| || || |||||||| |  |||||||| || |||
Sbjct: 45930 acgtatccccttgctagcattgtcttcacaacatcctgagcaatcgtcaaagcttcttgt 45989

                                   
Query: 593   ggagtggcgttgaactggcatg 614
             |||||||  |||||||||||||
Sbjct: 45990 ggagtggaattgaactggcatg 46011
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>emb|AL442112.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0423H10, complete
            sequence
          Length = 76529

 Score =  167 bits (84), Expect = 5e-38
 Identities = 159/184 (86%)
 Strand = Plus / Plus

                                                                        
Query: 251  gagagcctcggacagcatcatagctcctgcggagaaatagctgctcgtcacgatggtgtt 310
            |||||| || |||||||||||||||||||| |||||||||||||| |||| ||||   ||
Sbjct: 9108 gagagcatcagacagcatcatagctcctgcagagaaatagctgctggtcatgatgccatt 9167

                                                                        
Query: 311  cataaccttgaccgcggttcttccggtggcagtggcgacggtcttggtcgtctcggtaac 370
            || |||||| || || |||||||| ||||| |||||||||||||||||||||||||  ||
Sbjct: 9168 cacaaccttaactgctgttcttcctgtggcggtggcgacggtcttggtcgtctcggatac 9227

                                                                        
Query: 371  atggtatgtctcgtccactgatctgattgcgccaacaccagcactgactctgtcagtcag 430
             ||||||||||| ||||| ||||||||||| |||||||| || ||||| ||||| || ||
Sbjct: 9228 gtggtatgtctcatccaccgatctgattgcaccaacaccggcgctgaccctgtcggttag 9287

                
Query: 431  gccg 434
            ||||
Sbjct: 9288 gccg 9291



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 164/202 (81%), Gaps = 1/202 (0%)
 Strand = Plus / Plus

                                                                        
Query: 414  ctgactctgtcagtcaggccgagcctcctgctcagctctgcagcctttgctgccgcagat 473
            ||||| ||||| || ||||| | |||| |||||||||| |||||||| ||||| ||||  
Sbjct: 9292 ctgaccctgtcggttaggccaatcctcttgctcagctccgcagccttggctgcggcagtc 9351

                                                                        
Query: 474  ccagataactggtgggactcgtcgaaagctctagccctggacaatgcgtccttgctcagt 533
             | | || ||| |||||||| || || ||||||||||||| || ||| |||||||| |||
Sbjct: 9352 gctgttacctgatgggactcatcaaaggctctagccctggccagtgcatccttgctgagt 9411

                                                                        
Query: 534  atgtatcccctcgacagcatcgtctt-acgacgtcctgagccactgtcaaagcctcctgt 592
            | ||||||||| |  ||||| ||||| || || |||||||| |  |||||||| || |||
Sbjct: 9412 acgtatccccttgctagcattgtcttcacaacatcctgagcaatcgtcaaagcttcttgt 9471

                                  
Query: 593  ggagtggcgttgaactggcatg 614
            |||||||  |||||||||||||
Sbjct: 9472 ggagtggaattgaactggcatg 9493
to top
>gb|AY105883.1| Zea mays PCO068227 mRNA sequence
          Length = 1236

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 231/293 (78%), Gaps = 1/293 (0%)
 Strand = Plus / Minus

                                                                       
Query: 327 gttcttccggtggcagtggcgacggtcttggtcgtctcggtaacatggtatgtctcgtcc 386
           |||||||| |||||||| || || |||||||||||||| || ||  | |||||||| || 
Sbjct: 876 gttcttccagtggcagtagctaccgtcttggtcgtctccgttacgcgatatgtctcatcg 817

                                                                       
Query: 387 actgatctgattgcgccaacaccagcactgactctgtcagtcaggccgagcctcctgctc 446
           || ||||  ||||| || |||||||||||||| |||||||| |  || |  ||| |||||
Sbjct: 816 accgatcgcattgcaccgacaccagcactgaccctgtcagttaaaccaattctcttgctc 757

                                                                       
Query: 447 agctctgcagcctttgctgccgcagatccagataactggtgggactcgtcgaaagctcta 506
           |||||||||||||| ||||| || |   | | |||   | ||||||| || || ||||||
Sbjct: 756 agctctgcagccttggctgcagctgcagctgttaatccgcgggactcatcaaaggctcta 697

                                                                       
Query: 507 gccctggacaatgcgtccttgctcagtatgtatcccctcgacagcatcgtctt-acgacg 565
           ||| | | ||| ||||||||||| || | ||| ||| | |  ||||||||||| ||||  
Sbjct: 696 gccttagccaaagcgtccttgctgagcacgtacccctttgctagcatcgtcttcacgata 637

                                                                
Query: 566 tcctgagccactgtcaaagcctcctgtggagtggcgttgaactggcatgattg 618
           || ||||||||||| | ||| ||||| ||||| | |||| |||||||||||||
Sbjct: 636 tcttgagccactgtaagagcttcctgcggagtagtgttgtactggcatgattg 584
to top
>gb|AY108401.1| Zea mays PCO068228 mRNA sequence
          Length = 1376

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 208/265 (78%)
 Strand = Plus / Minus

                                                                        
Query: 194  cacttaattctgcctgccatgannngccagattttcagcggccttggcggcgcgggtgag 253
            ||||||||||||||| ||||||   ||||||| | | ||||||||||| || |  || ||
Sbjct: 1085 cacttaattctgcctaccatgagcggccagatctgccgcggccttggcagccctagtaag 1026

                                                                        
Query: 254  agcctcggacagcatcatagctcctgcggagaaatagctgctcgtcacgatggtgttcat 313
            ||| || ||||  ||||| |||||||| ||||| |||||||| || ||||||   || | 
Sbjct: 1025 agcatcagacaagatcatggctcctgcagagaagtagctgctggtgacgatgccatttac 966

                                                                        
Query: 314  aaccttgaccgcggttcttccggtggcagtggcgacggtcttggtcgtctcggtaacatg 373
             |||||  | || |||||||| |||||||| || || |||||||| |||||  | ||  |
Sbjct: 965  cacctttgctgccgttcttccagtggcagtagcaaccgtcttggttgtctctcttacgcg 906

                                                                        
Query: 374  gtatgtctcgtccactgatctgattgcgccaacaccagcactgactctgtcagtcaggcc 433
             |||||||| || |||||||  ||||| |||||||||||| |||| || ||||| |  ||
Sbjct: 905  atatgtctcatcgactgatcgcattgcaccaacaccagcattgaccctatcagttaaacc 846

                                     
Query: 434  gagcctcctgctcagctctgcagcc 458
             |  ||| |||||||||||||||||
Sbjct: 845  aattctcttgctcagctctgcagcc 821



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                  
Query: 569 tgagccactgtcaaagcctcctgtggagtggcgttgaactggcatgattggtagt 623
           ||||||||||| ||||| ||||| ||||| | |||| ||||||||| ||||||||
Sbjct: 709 tgagccactgtaaaagcttcctgcggagtagtgttgtactggcatgtttggtagt 655
to top
>gb|BT016343.1| Zea mays clone Contig176 mRNA sequence
          Length = 1045

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 207/265 (78%)
 Strand = Plus / Plus

                                                                       
Query: 194 cacttaattctgcctgccatgannngccagattttcagcggccttggcggcgcgggtgag 253
           ||||||||||||||| ||||||   ||||||| | | ||||||||||| || |  || ||
Sbjct: 199 cacttaattctgcctaccatgagcggccagatctgccgcggccttggcagccctagtaag 258

                                                                       
Query: 254 agcctcggacagcatcatagctcctgcggagaaatagctgctcgtcacgatggtgttcat 313
           ||| || ||||  ||||| |||||||| ||||| |||||||| || ||||||   || | 
Sbjct: 259 agcatcagacaagatcatggctcctgcagagaagtagctgctggtgacgatgccatttac 318

                                                                       
Query: 314 aaccttgaccgcggttcttccggtggcagtggcgacggtcttggtcgtctcggtaacatg 373
            |||||  | || |||||||| |||||||| || || |||||||| |||||  | ||   
Sbjct: 319 cacctttgctgccgttcttccagtggcagtagcaaccgtcttggttgtctctcttacgcc 378

                                                                       
Query: 374 gtatgtctcgtccactgatctgattgcgccaacaccagcactgactctgtcagtcaggcc 433
            |||||||| || |||||||  ||||| |||||||||||| |||| || ||||| |  ||
Sbjct: 379 atatgtctcatcgactgatcgcattgcaccaacaccagcattgaccctatcagttaaacc 438

                                    
Query: 434 gagcctcctgctcagctctgcagcc 458
            |  ||| |||||||||||||||||
Sbjct: 439 aattctcttgctcagctctgcagcc 463



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 48/55 (87%)
 Strand = Plus / Plus

                                                                  
Query: 569 tgagccactgtcaaagcctcctgtggagtggcgttgaactggcatgattggtagt 623
           ||||||||||| ||||| ||||| ||||| | |||| ||||||||| ||||||||
Sbjct: 575 tgagccactgtaaaagcttcctgcggagtagtgttgtactggcatgtttggtagt 629
to top
>gb|AY111947.1| Zea mays CL2727_-4 mRNA sequence
          Length = 516

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 327 gttcttccggtggcagtggcgacggtcttggtcgtctc 364
           |||||||| |||||||| || || ||||||||||||||
Sbjct: 180 gttcttccagtggcagtagctaccgtcttggtcgtctc 143
to top
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 231    gcggccttggcggcgcgggtga 252
              ||||||||||||||||||||||
Sbjct: 439079 gcggccttggcggcgcgggtga 439100
to top
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome
          Length = 4501104

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 232     cggccttggcggcgcgggtga 252
               |||||||||||||||||||||
Sbjct: 3884809 cggccttggcggcgcgggtga 3884789
to top
>emb|BX640447.1| Bordetella bronchiseptica strain RB50, complete genome; segment 11/16
          Length = 349442

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 229   cagcggccttggcggcgcggg 249
             |||||||||||||||||||||
Sbjct: 82704 cagcggccttggcggcgcggg 82724
to top
>emb|BX640428.1| Bordetella parapertussis strain 12822, complete genome; segment 6/14
          Length = 348525

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 229    cagcggccttggcggcgcggg 249
              |||||||||||||||||||||
Sbjct: 154943 cagcggccttggcggcgcggg 154923
to top
>emb|BX640417.1| Bordetella pertussis strain Tohama I, complete genome; segment 7/12
          Length = 348934

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 229    cagcggccttggcggcgcggg 249
              |||||||||||||||||||||
Sbjct: 126179 cagcggccttggcggcgcggg 126159
to top
>dbj|AK062620.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-105-B07, full
           insert sequence
          Length = 479

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 578 gtcaaagcctcctgtggagtggcgttgaactggcatg 614
           |||||||| || ||||||||||  |||||||||||||
Sbjct: 465 gtcaaagcttcttgtggagtggaattgaactggcatg 429
to top
>gb|AY663907.1| Uncultured Bacteroides sp. clone JL-ECS-C37 16S ribosomal RNA gene,
           partial sequence
          Length = 1055

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 174 tcgaacggggtgtttatttc 193
           ||||||||||||||||||||
Sbjct: 15  tcgaacggggtgtttatttc 34
to top
>gb|AF376159.1| Uncultured bacterium ckncm255-c8e3 16S ribosomal RNA gene, partial
           sequence
          Length = 403

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 174 tcgaacggggtgtttatttc 193
           ||||||||||||||||||||
Sbjct: 66  tcgaacggggtgtttatttc 85
to top
>gb|AF376162.1| Uncultured bacterium ckncm258-c8g5 16S ribosomal RNA gene, partial
           sequence
          Length = 297

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 174 tcgaacggggtgtttatttc 193
           ||||||||||||||||||||
Sbjct: 66  tcgaacggggtgtttatttc 85
to top
>gb|AF376163.1| Uncultured bacterium ckncm259-c8h12 16S ribosomal RNA gene, partial
           sequence
          Length = 452

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 174 tcgaacggggtgtttatttc 193
           ||||||||||||||||||||
Sbjct: 65  tcgaacggggtgtttatttc 84
to top
>gb|AF376164.1| Uncultured bacterium ckncm260-c8d3 16S ribosomal RNA gene, partial
           sequence
          Length = 286

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 174 tcgaacggggtgtttatttc 193
           ||||||||||||||||||||
Sbjct: 66  tcgaacggggtgtttatttc 85
to top
>gb|AF376165.1| Uncultured bacterium ckncm261-m8g11 16S ribosomal RNA gene, partial
           sequence
          Length = 298

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 174 tcgaacggggtgtttatttc 193
           ||||||||||||||||||||
Sbjct: 64  tcgaacggggtgtttatttc 83
to top
>gb|AF376166.1| Uncultured bacterium ckncm262-c8b6 16S ribosomal RNA gene, partial
           sequence
          Length = 468

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 174 tcgaacggggtgtttatttc 193
           ||||||||||||||||||||
Sbjct: 66  tcgaacggggtgtttatttc 85
to top
>gb|AF376167.1| Uncultured bacterium ckncm263-2m8f1 16S ribosomal RNA gene, partial
           sequence
          Length = 423

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 174 tcgaacggggtgtttatttc 193
           ||||||||||||||||||||
Sbjct: 63  tcgaacggggtgtttatttc 82
to top
>gb|AF376177.1| Uncultured bacterium ckncm273-2m8f2 16S ribosomal RNA gene, partial
           sequence
          Length = 426

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 174 tcgaacggggtgtttatttc 193
           ||||||||||||||||||||
Sbjct: 66  tcgaacggggtgtttatttc 85
to top
>gb|DQ456013.1| Uncultured bacterium clone CFT112C5 16S ribosomal RNA gene, partial
           sequence
          Length = 1479

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 174 tcgaacggggtgtttatttc 193
           ||||||||||||||||||||
Sbjct: 35  tcgaacggggtgtttatttc 54
to top
>gb|DQ455998.1| Uncultured bacterium clone CFT112B1 16S ribosomal RNA gene, partial
           sequence
          Length = 1480

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 174 tcgaacggggtgtttatttc 193
           ||||||||||||||||||||
Sbjct: 35  tcgaacggggtgtttatttc 54
to top
>gb|DQ455985.1| Uncultured bacterium clone CFT111H7 16S ribosomal RNA gene, partial
           sequence
          Length = 1479

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 174 tcgaacggggtgtttatttc 193
           ||||||||||||||||||||
Sbjct: 35  tcgaacggggtgtttatttc 54
to top
>gb|DQ455942.1| Uncultured bacterium clone CFT111D10 16S ribosomal RNA gene,
           partial sequence
          Length = 1479

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 174 tcgaacggggtgtttatttc 193
           ||||||||||||||||||||
Sbjct: 35  tcgaacggggtgtttatttc 54
to top
>gb|DQ455859.1| Uncultured bacterium clone CFT19D7 16S ribosomal RNA gene, partial
           sequence
          Length = 1444

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 174 tcgaacggggtgtttatttc 193
           ||||||||||||||||||||
Sbjct: 35  tcgaacggggtgtttatttc 54
to top
>emb|Z83838.2|HS127B20 Human DNA sequence from clone RP1-127B20 on chromosome 22, complete
             sequence
          Length = 135259

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 409   cagcactgactctgtcagtc 428
             ||||||||||||||||||||
Sbjct: 23095 cagcactgactctgtcagtc 23114
to top
>emb|AL358473.10| Human DNA sequence from clone RP11-168O16 on chromosome 1 Contains the
             5' end of the KIF21B gene for kinesin family member 21B,
             two novel genes and the 3' end of the CACNA1S gene for
             calcium channel voltage-dependent L type alpha 1S subunit,
             complete sequence
          Length = 78034

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 440   cctgctcagctctgcagcct 459
             ||||||||||||||||||||
Sbjct: 53289 cctgctcagctctgcagcct 53270
to top
>gb|AY729961.1| Megamonas hypermegale isolate W2 16S ribosomal RNA gene, partial
           sequence
          Length = 649

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 174 tcgaacggggtgtttatttc 193
           ||||||||||||||||||||
Sbjct: 35  tcgaacggggtgtttatttc 54
to top
>gb|DQ113693.1| Uncultured bacterium clone C8-17 16S ribosomal RNA gene, partial
           sequence
          Length = 1473

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 174 tcgaacggggtgtttatttc 193
           ||||||||||||||||||||
Sbjct: 27  tcgaacggggtgtttatttc 46
to top
>ref|XM_680154.1| PREDICTED: Danio rerio similar to Mdm4, transformed 3T3 cell double
            minute 1, p53 binding protein (LOC557148), mRNA
          Length = 2379

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 497  gaaagctctagccctggaca 516
            ||||||||||||||||||||
Sbjct: 1327 gaaagctctagccctggaca 1346
to top
>gb|DQ057390.1| uncultured bacterium clone cc337 16S ribosomal RNA gene, 1418 bp
          Length = 1418

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 174 tcgaacggggtgtttatttc 193
           ||||||||||||||||||||
Sbjct: 35  tcgaacggggtgtttatttc 54
to top
>dbj|AB064932.1| Human intestinal firmicute CS13 gene for 16S rRNA, partial sequence
          Length = 536

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 174 tcgaacggggtgtttatttc 193
           ||||||||||||||||||||
Sbjct: 55  tcgaacggggtgtttatttc 74
to top
>dbj|AB064931.1| Human intestinal firmicute CB15 gene for 16S rRNA, partial sequence
          Length = 537

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 174 tcgaacggggtgtttatttc 193
           ||||||||||||||||||||
Sbjct: 55  tcgaacggggtgtttatttc 74
to top
>dbj|AB064851.1| Uncultured Gram-positive bacterium gene for 16S rRNA, partial
           sequence, clone: NS2A2
          Length = 536

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 174 tcgaacggggtgtttatttc 193
           ||||||||||||||||||||
Sbjct: 55  tcgaacggggtgtttatttc 74
to top
>dbj|AB064850.1| Uncultured Gram-positive bacterium gene for 16S rRNA, partial
           sequence, clone: NB2D6
          Length = 537

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 174 tcgaacggggtgtttatttc 193
           ||||||||||||||||||||
Sbjct: 55  tcgaacggggtgtttatttc 74
to top
>dbj|AB064837.1| Uncultured Gram-positive bacterium gene for 16S rRNA, partial
           sequence, clone: NB4B4
          Length = 530

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 174 tcgaacggggtgtttatttc 193
           ||||||||||||||||||||
Sbjct: 48  tcgaacggggtgtttatttc 67
to top
>gb|AC139931.5| Homo sapiens 12 BAC RP11-43A22 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 94635

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 20    cacatttgttgtctgaataa 39
             ||||||||||||||||||||
Sbjct: 34266 cacatttgttgtctgaataa 34285
to top
>gb|AY669251.1| Uncultured Megamonas sp. clone CA915 16S ribosomal RNA gene,
           partial sequence
          Length = 353

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 174 tcgaacggggtgtttatttc 193
           ||||||||||||||||||||
Sbjct: 312 tcgaacggggtgtttatttc 293
to top
>emb|BX465210.7| Zebrafish DNA sequence from clone CH211-266A5 in linkage group 4,
             complete sequence
          Length = 171708

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 497   gaaagctctagccctggaca 516
             ||||||||||||||||||||
Sbjct: 60338 gaaagctctagccctggaca 60357
to top
>emb|AJ420107.1|MHY420107 Megamonas hypermegale 16S rRNA gene, strain DSM 1672T
          Length = 1518

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 174 tcgaacggggtgtttatttc 193
           ||||||||||||||||||||
Sbjct: 45  tcgaacggggtgtttatttc 64


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,243,645
Number of Sequences: 3902068
Number of extensions: 4243645
Number of successful extensions: 79164
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 78941
Number of HSP's gapped (non-prelim): 211
length of query: 627
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 604
effective length of database: 17,143,297,704
effective search space: 10354551813216
effective search space used: 10354551813216
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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