ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd22i12 |
|---|---|
| Clone Library Name | barley_pub |
>BI1_ORYSA (Q9MBD8) Bax inhibitor 1 (BI-1) (OsBI-1)| Length = 249 Score = 103 bits (258), Expect = 9e-23 Identities = 49/55 (89%), Positives = 52/55 (94%) Frame = -2 Query: 166 YMVYDTQEIIERAHHGDMDYIKHALTLFTDFVAVLVRVLIIMLKNAGDKSEHXKK 2 YMVYDTQEIIERAHHGDMDYIKHALTLFTDFVAVLVR+L+IMLKNA DKSE K+ Sbjct: 191 YMVYDTQEIIERAHHGDMDYIKHALTLFTDFVAVLVRILVIMLKNASDKSEEKKR 245
>BI1_ARATH (Q9LD45) Bax inhibitor 1 (BI-1) (AtBI-1)| Length = 247 Score = 90.9 bits (224), Expect = 8e-19 Identities = 43/55 (78%), Positives = 48/55 (87%) Frame = -2 Query: 166 YMVYDTQEIIERAHHGDMDYIKHALTLFTDFVAVLVRVLIIMLKNAGDKSEHXKK 2 YMV DTQEIIE+AH GDMDY+KH+LTLFTDFVAV VR+LIIMLKN+ DK E KK Sbjct: 190 YMVVDTQEIIEKAHLGDMDYVKHSLTLFTDFVAVFVRILIIMLKNSADKEEKKKK 244
>BI1_HUMAN (P55061) Bax inhibitor 1 (BI-1) (Testis-enhanced gene transcript)| (Transmembrane BAX inhibitor motif-containing protein 6) Length = 237 Score = 57.4 bits (137), Expect = 1e-08 Identities = 24/54 (44%), Positives = 37/54 (68%) Frame = -2 Query: 166 YMVYDTQEIIERAHHGDMDYIKHALTLFTDFVAVLVRVLIIMLKNAGDKSEHXK 5 ++++DTQ IIE+A HGD DYI H + LF DF+ V ++++I+ N DK + K Sbjct: 184 FVLFDTQLIIEKAEHGDQDYIWHCIDLFLDFITVFRKLMMILAMNEKDKKKEKK 237
>BI1_PONPY (Q5R7R1) Bax inhibitor 1 (BI-1) (Testis-enhanced gene transcript)| Length = 237 Score = 56.2 bits (134), Expect = 2e-08 Identities = 23/54 (42%), Positives = 37/54 (68%) Frame = -2 Query: 166 YMVYDTQEIIERAHHGDMDYIKHALTLFTDFVAVLVRVLIIMLKNAGDKSEHXK 5 ++++DTQ IIE+A HGD DYI H + LF DF+ + ++++I+ N DK + K Sbjct: 184 FVLFDTQLIIEKAEHGDQDYIWHCIDLFLDFITLFRKLMMILAMNEKDKKKEKK 237
>BI1_RAT (P55062) Bax inhibitor 1 (BI-1) (Testis-enhanced gene transcript)| Length = 237 Score = 55.8 bits (133), Expect = 3e-08 Identities = 24/54 (44%), Positives = 37/54 (68%) Frame = -2 Query: 166 YMVYDTQEIIERAHHGDMDYIKHALTLFTDFVAVLVRVLIIMLKNAGDKSEHXK 5 ++++DTQ IIE+A HGD DYI H + LF DFV + ++++I+ N DK + K Sbjct: 184 FVLFDTQLIIEKAEHGDKDYIWHCIDLFLDFVTLFRKLMLILAFNEKDKKKEKK 237
>BI1_MOUSE (Q9D2C7) Bax inhibitor 1 (BI-1) (Testis-enhanced gene transcript)| Length = 237 Score = 55.5 bits (132), Expect = 4e-08 Identities = 24/54 (44%), Positives = 37/54 (68%) Frame = -2 Query: 166 YMVYDTQEIIERAHHGDMDYIKHALTLFTDFVAVLVRVLIIMLKNAGDKSEHXK 5 ++++DTQ IIE+A HGD DYI H + LF DFV + ++++I+ N DK + K Sbjct: 184 FVLFDTQLIIEKAEHGDKDYIWHCVDLFLDFVTLFRKLMLILAFNEKDKKKEKK 237
>BI1_PIG (Q66RM2) Bax inhibitor 1 (BI-1) (Testis-enhanced gene transcript)| Length = 237 Score = 53.9 bits (128), Expect = 1e-07 Identities = 23/54 (42%), Positives = 38/54 (70%) Frame = -2 Query: 166 YMVYDTQEIIERAHHGDMDYIKHALTLFTDFVAVLVRVLIIMLKNAGDKSEHXK 5 ++++DTQ IIE+A +GD DYI H + LF+DFV + ++++I+ N DK + K Sbjct: 184 FVLFDTQLIIEKAENGDKDYIWHCVDLFSDFVTLFRKLMMILAMNEKDKKKEKK 237
>BI1_PAROL (Q9IA79) Probable Bax inhibitor 1 (BI-1)| Length = 237 Score = 52.0 bits (123), Expect = 4e-07 Identities = 21/54 (38%), Positives = 37/54 (68%) Frame = -2 Query: 166 YMVYDTQEIIERAHHGDMDYIKHALTLFTDFVAVLVRVLIIMLKNAGDKSEHXK 5 +++ DTQ IIE+A +GD DY+ H++ LF DF+ + ++++I+ N DK + K Sbjct: 184 FVLXDTQLIIEKAENGDKDYVWHSVDLFLDFITIFRKLMVILALNDKDKKKEKK 237
>BI1_DROME (Q9VSH3) Probable Bax inhibitor 1 (BI-1)| Length = 245 Score = 47.4 bits (111), Expect = 1e-05 Identities = 20/55 (36%), Positives = 36/55 (65%) Frame = -2 Query: 166 YMVYDTQEIIERAHHGDMDYIKHALTLFTDFVAVLVRVLIIMLKNAGDKSEHXKK 2 ++VYDTQ I+E+ +G+ D ++HAL LF D +++ R+LII+ + K ++ Sbjct: 187 FIVYDTQNIVEKCRNGNRDVVQHALDLFFDVLSMFRRLLIILTQKEERKQNERRQ 241
>CITE2_MOUSE (O35740) Cbp/p300-interacting transactivator 2 (MSG-related protein| 1) (MRG-1) Length = 269 Score = 32.7 bits (73), Expect = 0.27 Identities = 14/29 (48%), Positives = 18/29 (62%) Frame = -1 Query: 116 HGLHQARPHPLHRLCCRPRPSPHHHAQER 30 +GLH HP HR+ PSPHHH Q++ Sbjct: 18 NGLHH---HPAHRMGMGQFPSPHHHQQQQ 43
>CITE2_HUMAN (Q99967) Cbp/p300-interacting transactivator 2 (MSG-related protein| 1) (MRG-1) (P35srj) Length = 270 Score = 32.7 bits (73), Expect = 0.27 Identities = 14/29 (48%), Positives = 18/29 (62%) Frame = -1 Query: 116 HGLHQARPHPLHRLCCRPRPSPHHHAQER 30 +GLH HP HR+ PSPHHH Q++ Sbjct: 18 NGLHH---HPAHRMGMGQFPSPHHHQQQQ 43
>TMBI1_HUMAN (Q969X1) Transmembrane BAX inhibitor motif-containing protein 1| (RECS1 protein homolog) Length = 311 Score = 30.8 bits (68), Expect = 1.0 Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 2/44 (4%) Frame = -2 Query: 166 YMVYDTQEIIERAHH--GDMDYIKHALTLFTDFVAVLVRVLIIM 41 ++ YDTQ ++ H DYI AL ++TD + + VL +M Sbjct: 264 FLAYDTQLVLGNRKHTISPEDYITGALQIYTDIIYIFTFVLQLM 307
>HRPX_PLALO (P04929) Histidine-rich glycoprotein precursor| Length = 351 Score = 30.4 bits (67), Expect = 1.3 Identities = 14/37 (37%), Positives = 14/37 (37%) Frame = -1 Query: 152 HAGDHREGAPWRHGLHQARPHPLHRLCCRPRPSPHHH 42 H G H AP H H PH H P HHH Sbjct: 165 HLGYHHHHAPHHHHHHHHAPHHHHHHHHAPHHHHHHH 201 Score = 29.3 bits (64), Expect = 2.9 Identities = 14/41 (34%), Positives = 14/41 (34%) Frame = -1 Query: 164 HGVRHAGDHREGAPWRHGLHQARPHPLHRLCCRPRPSPHHH 42 H H H AP H H PH H P HHH Sbjct: 181 HHAPHHHHHHHHAPHHHHHHHHAPHHHHHHHHAPHHHHHHH 221 Score = 29.3 bits (64), Expect = 2.9 Identities = 14/41 (34%), Positives = 14/41 (34%) Frame = -1 Query: 164 HGVRHAGDHREGAPWRHGLHQARPHPLHRLCCRPRPSPHHH 42 H H H AP H H PH H P HHH Sbjct: 171 HHAPHHHHHHHHAPHHHHHHHHAPHHHHHHHHAPHHHHHHH 211 Score = 28.5 bits (62), Expect = 5.0 Identities = 15/44 (34%), Positives = 16/44 (36%), Gaps = 3/44 (6%) Frame = -1 Query: 164 HGVRHAGDHREGAPWRHGLHQARPHPL---HRLCCRPRPSPHHH 42 H HA H H H A HP H L +PHHH Sbjct: 134 HHHHHAAHHHHHEEHHHHHHAAHHHPWFHHHHLGYHHHHAPHHH 177
>BAT5_MOUSE (Q9Z1Q2) Protein BAT5 (HLA-B-associated transcript 5)| Length = 557 Score = 30.4 bits (67), Expect = 1.3 Identities = 16/44 (36%), Positives = 19/44 (43%) Frame = -1 Query: 209 FMFEVXLWPVDLPGVHGVRHAGDHREGAPWRHGLHQARPHPLHR 78 + F+ WPVD G G P R G+ RP PLHR Sbjct: 148 YNFDFRSWPVDFHWEEPSSRKGSR--GGPSRRGVALLRPEPLHR 189
>NCE1_YEAST (Q02820) Non-classical export protein 1| Length = 53 Score = 30.0 bits (66), Expect = 1.7 Identities = 11/24 (45%), Positives = 17/24 (70%) Frame = +3 Query: 138 MISCVSYTMYPRKINRPKXNLKHE 209 M+ C+SY +Y RK+ RP+ + HE Sbjct: 20 MVGCLSYYVYERKMGRPQGHHLHE 43
>CEMA_CHAGL (Q8M9X3) Chloroplast envelope membrane protein| Length = 472 Score = 30.0 bits (66), Expect = 1.7 Identities = 13/37 (35%), Positives = 23/37 (62%) Frame = -2 Query: 148 QEIIERAHHGDMDYIKHALTLFTDFVAVLVRVLIIML 38 Q I+ A + + D I L LFTDF+A+ +++++L Sbjct: 333 QRTIQLAEYYNQDSINIILHLFTDFIAIFTLIVLLIL 369
>TMBI1_MOUSE (Q8BJZ3) Transmembrane BAX inhibitor motif-containing protein 1| (RECS1 protein) (Responsive to centrifugal force and shear stress gene 1 protein) Length = 309 Score = 29.6 bits (65), Expect = 2.2 Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 2/41 (4%) Frame = -2 Query: 166 YMVYDTQEIIERAHH--GDMDYIKHALTLFTDFVAVLVRVL 50 ++ YDTQ ++ H DYI AL ++TD V + VL Sbjct: 262 FLAYDTQLVLGNRKHTISPEDYITGALQIYTDIVYIFTFVL 302
>CI079_HUMAN (Q6ZUB1) Protein C9orf79| Length = 1445 Score = 28.9 bits (63), Expect = 3.8 Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 6/52 (11%) Frame = -1 Query: 155 RHAGDHR--EGAP---WRHGLHQARPHPLHRLCCRPRPSPH-HHAQERRRQV 18 RH GD R E P R HQ R + L C P+ +P HH + R + Sbjct: 1344 RHKGDFRAQENVPSCCHRGHCHQERSREMRALACSPKATPKGHHCPVKNRGI 1395
>SYC1_STRCO (Q9L0Q6) Cysteinyl-tRNA synthetase 1 (EC 6.1.1.16) (Cysteine--tRNA| ligase 1) (CysRS 1) Length = 613 Score = 28.9 bits (63), Expect = 3.8 Identities = 12/30 (40%), Positives = 14/30 (46%) Frame = -1 Query: 131 GAPWRHGLHQARPHPLHRLCCRPRPSPHHH 42 G P R + + PHP PRP P HH Sbjct: 6 GTPRRPAVRGSAPHPARGSAPGPRPMPTHH 35
>ANG2_BOVIN (P80929) Angiogenin-2 (EC 3.1.27.-)| Length = 123 Score = 28.5 bits (62), Expect = 5.0 Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 9/59 (15%) Frame = -1 Query: 167 VHG----VRHAGDHREGAPWRHGLHQARPHPLHRLCCR-----PRPSPHHHAQERRRQV 18 +HG +R D R G P+R+GL ++R P CR PRP + A R + Sbjct: 45 IHGNSDDIRAVCDDRNGEPYRNGLRRSR-SPFQVTTCRHRGGSPRPPCRYRAFRANRVI 102
>RABX5_HUMAN (Q9UJ41) Rab5 GDP/GTP exchange factor (Rabaptin 5-associated| exchange factor for Rab5) (Rabex-5) Length = 708 Score = 28.1 bits (61), Expect = 6.5 Identities = 19/52 (36%), Positives = 20/52 (38%), Gaps = 6/52 (11%) Frame = -1 Query: 173 PGVHGVRHAGDHREGAPWRHGLHQARPHPLHRLC------CRPRPSPHHHAQ 36 PG G A + REGAP G H PL C C P P AQ Sbjct: 81 PGAAGEHAATEGREGAPSVSGTHALLQRPLGADCGDRPAACGPAEGPLCQAQ 132
>CD2_HUMAN (P06729) T-cell surface antigen CD2 precursor (T-cell surface| antigen T11/Leu-5) (LFA-2) (LFA-3 receptor) (Erythrocyte receptor) (Rosette receptor) Length = 351 Score = 28.1 bits (61), Expect = 6.5 Identities = 17/46 (36%), Positives = 23/46 (50%) Frame = -1 Query: 173 PGVHGVRHAGDHREGAPWRHGLHQARPHPLHRLCCRPRPSPHHHAQ 36 P H V+H R AP +HQ + PL R +P+P PH A+ Sbjct: 299 PPGHRVQHQPQKRPPAPSGTQVHQQKGPPLPRPRVQPKP-PHGAAE 343
>BAT5_HUMAN (O95870) Protein BAT5 (HLA-B-associated transcript 5) (Protein G5)| Length = 557 Score = 28.1 bits (61), Expect = 6.5 Identities = 15/44 (34%), Positives = 19/44 (43%) Frame = -1 Query: 209 FMFEVXLWPVDLPGVHGVRHAGDHREGAPWRHGLHQARPHPLHR 78 + F+ WPVD + G P R G+ RP PLHR Sbjct: 148 YNFDFRSWPVDFHWEEP--SSRKESRGGPSRRGVALLRPEPLHR 189
>CD2_MACFA (Q6SZ61) T-cell surface antigen CD2 precursor| Length = 351 Score = 27.7 bits (60), Expect = 8.5 Identities = 15/40 (37%), Positives = 20/40 (50%) Frame = -1 Query: 176 LPGVHGVRHAGDHREGAPWRHGLHQARPHPLHRLCCRPRP 57 LP H V+H R AP +HQ + PL R +P+P Sbjct: 298 LPPGHRVQHQPQKRPPAPSGTQVHQQKGPPLPRPRVQPKP 337
>K0323_HUMAN (O15037) Protein KIAA0323| Length = 678 Score = 27.7 bits (60), Expect = 8.5 Identities = 15/48 (31%), Positives = 16/48 (33%) Frame = -1 Query: 173 PGVHGVRHAGDHREGAPWRHGLHQARPHPLHRLCCRPRPSPHHHAQER 30 PG HG H GA LH P P P P H +R Sbjct: 326 PGAHGSCHRAAQSRGASLLQRLHNGNASPPRVPSPPPAPEPPWHCGDR 373
>RIPK3_MOUSE (Q9QZL0) Receptor-interacting serine/threonine-protein kinase 3 (EC| 2.7.11.1) (RIP-like protein kinase 3) (Receptor-interacting protein 3) (RIP-3) (mRIP3) Length = 486 Score = 27.7 bits (60), Expect = 8.5 Identities = 10/20 (50%), Positives = 12/20 (60%) Frame = -1 Query: 179 DLPGVHGVRHAGDHREGAPW 120 + PG H R+ GD R G PW Sbjct: 406 ETPGPHPQRNQGDGRHGTPW 425
>SCNAA_MOUSE (Q61180) Amiloride-sensitive sodium channel alpha-subunit| (Epithelial Na+ channel alpha subunit) (Alpha ENaC) (Nonvoltage-gated sodium channel 1 alpha subunit) (SCNEA) (Alpha NaCH) Length = 699 Score = 27.7 bits (60), Expect = 8.5 Identities = 17/46 (36%), Positives = 19/46 (41%) Frame = -1 Query: 155 RHAGDHREGAPWRHGLHQARPHPLHRLCCRPRPSPHHHAQERRRQV 18 R AG R L A PHPL RL P P+P A+ V Sbjct: 195 RQAGGRRRST---RDLRGALPHPLQRLRTPPPPNPARSARSASSSV 237 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 23,785,451 Number of Sequences: 219361 Number of extensions: 422128 Number of successful extensions: 1724 Number of sequences better than 10.0: 27 Number of HSP's better than 10.0 without gapping: 1618 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1715 length of database: 80,573,946 effective HSP length: 45 effective length of database: 70,702,701 effective search space used: 1696864824 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
