Clone Name | rbasd22i04 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | S6A18_MOUSE (O88576) Sodium- and chloride-dependent transporter ... | 32 | 1.1 | 2 | S6A18_RAT (Q62687) Sodium- and chloride-dependent transporter XT... | 32 | 1.4 |
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>S6A18_MOUSE (O88576) Sodium- and chloride-dependent transporter XTRP2 (Solute| carrier family 6 member 18) Length = 615 Score = 32.3 bits (72), Expect = 1.1 Identities = 14/43 (32%), Positives = 23/43 (53%) Frame = -2 Query: 309 NPSTGGGGEGFFSLNYESDFGFNRGLRWLSYVMKISYAHGVPW 181 +P GG G G FS+++ +N L W+ + S+ H +PW Sbjct: 93 SPYLGGVGLGCFSVSFLVSLYYNTVLLWVLWFFLNSFQHPLPW 135
>S6A18_RAT (Q62687) Sodium- and chloride-dependent transporter XTRP2 (Solute| carrier family 6 member 18) (Renal osmotic stress-induced Na-Cl organic solute cotransporter) (ROSIT) Length = 615 Score = 32.0 bits (71), Expect = 1.4 Identities = 14/43 (32%), Positives = 23/43 (53%) Frame = -2 Query: 309 NPSTGGGGEGFFSLNYESDFGFNRGLRWLSYVMKISYAHGVPW 181 +P GG G G FS+++ +N L W+ + S+ H +PW Sbjct: 93 SPYLGGVGLGCFSVSFLVSLYYNTILLWVLWFFLNSFQHPLPW 135 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 63,379,978 Number of Sequences: 219361 Number of extensions: 1038211 Number of successful extensions: 2050 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 2010 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2048 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5158951200 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)