ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd22i04 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC154049.1| Drosophila melanogaster clone BACR23M02, complete sequence Length = 126566 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 365 gaagaagaagaagcagatgctgc 387 ||||||||||||||||||||||| Sbjct: 109066 gaagaagaagaagcagatgctgc 109044
>emb|X71067.1|XLXFG512 X.laevis XFG 5-1 and XFG 5-2 genes for zinc finger proteins Length = 19338 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 281 ccttctcctcctcctcctgtact 303 ||||||||||||||||||||||| Sbjct: 1620 ccttctcctcctcctcctgtact 1642
>gb|AC023748.4| Drosophila melanogaster X BAC RP98-36F8 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 156096 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 365 gaagaagaagaagcagatgctgc 387 ||||||||||||||||||||||| Sbjct: 12139 gaagaagaagaagcagatgctgc 12117
>gb|AE003445.2| Drosophila melanogaster chromosome X, section 29 of 74 of the complete sequence Length = 334222 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 365 gaagaagaagaagcagatgctgc 387 ||||||||||||||||||||||| Sbjct: 174249 gaagaagaagaagcagatgctgc 174271
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 534 gtcgcggcttgcgcggcagcag 555 |||||||||||||||||||||| Sbjct: 2017692 gtcgcggcttgcgcggcagcag 2017671
>ref|XM_460502.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0F03520g) partial mRNA Length = 1806 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 199 ataacttattttcatgacataa 220 |||||||||||||||||||||| Sbjct: 292 ataacttattttcatgacataa 313
>ref|XM_453860.1| Kluyveromyces lactis NRRL Y-1140, KLLA0D18073g predicted mRNA Length = 1917 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 362 gaggaagaagaagaagcagatg 383 |||||||||||||||||||||| Sbjct: 1828 gaggaagaagaagaagcagatg 1849
>gb|AC137744.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0074L11, complete sequence Length = 180703 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Minus Query: 522 gctgtcgtgtctgtcgcggcttgcgcggcagcagggcc 559 ||||||| | ||||||||||| ||||||||||| |||| Sbjct: 52318 gctgtcgaggctgtcgcggctggcgcggcagcacggcc 52281
>emb|AL445468.8| Human DNA sequence from clone RP11-74P14 on chromosome 1 Contains part of the SMYD3 gene for SET and MYND domain containing 3 and two CpG islands, complete sequence Length = 179503 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 282 cttctcctcctcctcctgtact 303 |||||||||||||||||||||| Sbjct: 121084 cttctcctcctcctcctgtact 121105
>emb|CR382138.1| Debaryomyces hansenii chromosome F of strain CBS767 of Debaryomyces hansenii Length = 2336804 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 199 ataacttattttcatgacataa 220 |||||||||||||||||||||| Sbjct: 283654 ataacttattttcatgacataa 283633
>emb|CR382124.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome D of strain NRRL Y-1140 of Kluyveromyces lactis Length = 1715506 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 362 gaggaagaagaagaagcagatg 383 |||||||||||||||||||||| Sbjct: 1526577 gaggaagaagaagaagcagatg 1526598
>ref|NM_170140.1| Drosophila melanogaster CG5746-RB, transcript variant B (CG5746), mRNA Length = 2613 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 359 ccggaggaagaagaagaagcag 380 |||||||||||||||||||||| Sbjct: 218 ccggaggaagaagaagaagcag 197
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Minus Query: 522 gctgtcgtgtctgtcgcggcttgcgcggcagcagggcc 559 ||||||| | ||||||||||| ||||||||||| |||| Sbjct: 21700265 gctgtcgaggctgtcgcggctggcgcggcagcacggcc 21700228
>gb|AC008204.9|AC008204 Drosophila melanogaster, chromosome 3R, region 95E-95F, BAC clone BACR04E17, complete sequence Length = 199016 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 359 ccggaggaagaagaagaagcag 380 |||||||||||||||||||||| Sbjct: 98026 ccggaggaagaagaagaagcag 98047
>dbj|AK068548.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013155D03, full insert sequence Length = 1784 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Minus Query: 522 gctgtcgtgtctgtcgcggcttgcgcggcagcagggcc 559 ||||||| | ||||||||||| ||||||||||| |||| Sbjct: 1195 gctgtcgaggctgtcgcggctggcgcggcagcacggcc 1158
>emb|CT573019.12| Mouse DNA sequence from clone RP24-94G12 on chromosome 14, complete sequence Length = 136188 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 275 aaaaagccttctcctcctcctc 296 |||||||||||||||||||||| Sbjct: 86794 aaaaagccttctcctcctcctc 86773
>gb|AE003747.3| Drosophila melanogaster chromosome 3R, section 85 of 118 of the complete sequence Length = 206741 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 359 ccggaggaagaagaagaagcag 380 |||||||||||||||||||||| Sbjct: 98282 ccggaggaagaagaagaagcag 98303
>gb|BT001775.1| Drosophila melanogaster RH13835 full insert cDNA Length = 2535 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 359 ccggaggaagaagaagaagcag 380 |||||||||||||||||||||| Sbjct: 196 ccggaggaagaagaagaagcag 175
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Minus Query: 522 gctgtcgtgtctgtcgcggcttgcgcggcagcagggcc 559 ||||||| | ||||||||||| ||||||||||| |||| Sbjct: 22010464 gctgtcgaggctgtcgcggctggcgcggcagcacggcc 22010427
>ref|XM_511299.1| PREDICTED: Pan troglodytes similar to Zinc finger and BTB domain containing protein 4 (KAISO-like zinc finger protein 1) (KAISO-L1) (LOC454462), mRNA Length = 1370 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 361 ggaggaagaagaagaagcaga 381 ||||||||||||||||||||| Sbjct: 593 ggaggaagaagaagaagcaga 573
>ref|XM_716386.1| Candida albicans SC5314 putative nucleic acid binding protein (CaO19_2980), mRNA Length = 2178 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 361 ggaggaagaagaagaagcaga 381 ||||||||||||||||||||| Sbjct: 147 ggaggaagaagaagaagcaga 167
>ref|XM_716114.1| Candida albicans SC5314 putative nucleic acid binding protein (CaO19_10497), mRNA Length = 2178 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 361 ggaggaagaagaagaagcaga 381 ||||||||||||||||||||| Sbjct: 147 ggaggaagaagaagaagcaga 167
>ref|XM_705326.1| Candida albicans SC5314 hypothetical protein (CaO19.12666), mRNA Length = 360 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 362 gaggaagaagaagaagcagat 382 ||||||||||||||||||||| Sbjct: 245 gaggaagaagaagaagcagat 225
>ref|XM_705325.1| Candida albicans SC5314 hypothetical protein (CaO19.12665), mRNA Length = 2226 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 362 gaggaagaagaagaagcagat 382 ||||||||||||||||||||| Sbjct: 703 gaggaagaagaagaagcagat 723
>ref|XM_705315.1| Candida albicans SC5314 hypothetical protein (CaO19.5199), mRNA Length = 360 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 362 gaggaagaagaagaagcagat 382 ||||||||||||||||||||| Sbjct: 245 gaggaagaagaagaagcagat 225
>ref|XM_705314.1| Candida albicans SC5314 hypothetical protein (CaO19.5198), mRNA Length = 2226 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 362 gaggaagaagaagaagcagat 382 ||||||||||||||||||||| Sbjct: 703 gaggaagaagaagaagcagat 723
>gb|AC158302.3| Mus musculus chromosome 5, clone RP24-61O18, complete sequence Length = 215326 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 361 ggaggaagaagaagaagcaga 381 ||||||||||||||||||||| Sbjct: 168559 ggaggaagaagaagaagcaga 168539
>gb|AC132418.3| Mus musculus BAC clone RP23-251N2 from chromosome 18, complete sequence Length = 206588 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 427 gcatggttcttggcctgcttc 447 ||||||||||||||||||||| Sbjct: 156758 gcatggttcttggcctgcttc 156778
>ref|XM_391102.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG10926.1) partial mRNA Length = 942 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 361 ggaggaagaagaagaagcaga 381 ||||||||||||||||||||| Sbjct: 411 ggaggaagaagaagaagcaga 431
>gb|AC132229.3| Mus musculus BAC clone RP24-484C7 from chromosome 5, complete sequence Length = 170292 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 361 ggaggaagaagaagaagcaga 381 ||||||||||||||||||||| Sbjct: 134733 ggaggaagaagaagaagcaga 134753
>gb|AC131109.3| Mus musculus BAC clone RP23-362M7 from chromosome 18, complete sequence Length = 177690 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 361 ggaggaagaagaagaagcaga 381 ||||||||||||||||||||| Sbjct: 104494 ggaggaagaagaagaagcaga 104514
>emb|BX890603.17| Zebrafish DNA sequence from clone DKEYP-19G9 in linkage group 23, complete sequence Length = 184711 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 108 tctcacatctgtgataaatatgcaa 132 ||||| ||||||||||||||||||| Sbjct: 36608 tctcaaatctgtgataaatatgcaa 36584
>gb|AC121917.2| Mus musculus BAC clone RP24-194F23 from 5, complete sequence Length = 178113 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 361 ggaggaagaagaagaagcaga 381 ||||||||||||||||||||| Sbjct: 19444 ggaggaagaagaagaagcaga 19464
>gb|BC005639.1| Mus musculus DNA segment, Chr 11, Lothar Hennighausen 1, expressed, mRNA (cDNA clone MGC:7154 IMAGE:3256858), complete cds Length = 2152 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 279 agccttctcctcctcctcctg 299 ||||||||||||||||||||| Sbjct: 1576 agccttctcctcctcctcctg 1596
>emb|AL034421.7|HS1137F22 Human DNA sequence from clone RP5-1137F22 on chromosome 20q11.2-12 Contains the 5' end of the CBFA2T2 gene for runt domain core-binding factor alpha subunit 2 and a CpG island, complete sequence Length = 92807 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 117 tgtgataaatatgcaaagtga 137 ||||||||||||||||||||| Sbjct: 40816 tgtgataaatatgcaaagtga 40796
>ref|XM_963142.1| PREDICTED: Tribolium castaneum similar to aspartate beta-hydroxylase isoform a (LOC656627), mRNA Length = 2345 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 361 ggaggaagaagaagaagcaga 381 ||||||||||||||||||||| Sbjct: 602 ggaggaagaagaagaagcaga 622
>emb|AL731638.3|OSJN00283 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0116K07, complete sequence Length = 130779 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 359 ccggaggaagaagaagaagca 379 ||||||||||||||||||||| Sbjct: 22851 ccggaggaagaagaagaagca 22871
>emb|AL033497.1|CAC49C10 C.albicans cosmid Ca49C10 Length = 37825 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 361 ggaggaagaagaagaagcaga 381 ||||||||||||||||||||| Sbjct: 25130 ggaggaagaagaagaagcaga 25150
>emb|AL645973.8| Mouse DNA sequence from clone RP23-287B6 on chromosome 11 Contains a pseudogene similar to part of ribosomal protein S2 (Rps2), a mitchondrial ribosomal protein S7 (Rpms7, MRP-S7) (Mrps7) pseudogene, a pseudogene similar to part of a novel protein, a novel gene and a eukaryotic translation initiation factor pseudogene, complete sequence Length = 196006 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 125 atatgcaaagtgagatgaaat 145 ||||||||||||||||||||| Sbjct: 95282 atatgcaaagtgagatgaaat 95262
>gb|AF494464.1| Mus musculus prepro-orexin gene, 5' flanking region Length = 4950 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 279 agccttctcctcctcctcctg 299 ||||||||||||||||||||| Sbjct: 1360 agccttctcctcctcctcctg 1380
>dbj|AK135322.1| Mus musculus 12 days embryo male wolffian duct includes surrounding region cDNA, RIKEN full-length enriched library, clone:6720478J24 product:hypothetical protein, full insert sequence Length = 2216 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 279 agccttctcctcctcctcctg 299 ||||||||||||||||||||| Sbjct: 1597 agccttctcctcctcctcctg 1617
>dbj|AK143922.1| Mus musculus adult male kidney cDNA, RIKEN full-length enriched library, clone:F520014B03 product:similar to Hypothetical protein FLJ90219 (Likely ortholog of mouse D11lgp1) [Homo sapiens], full insert sequence Length = 2151 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 279 agccttctcctcctcctcctg 299 ||||||||||||||||||||| Sbjct: 1564 agccttctcctcctcctcctg 1584
>gb|AC010768.10| Homo sapiens chromosome 11, clone RP11-58K22, complete sequence Length = 192391 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 276 aaaagccttctcctcctcctcctgt 300 |||||||| |||||||||||||||| Sbjct: 60763 aaaagcctgctcctcctcctcctgt 60787
>dbj|AK161571.1| Mus musculus adult male pituitary gland cDNA, RIKEN full-length enriched library, clone:5330419C14 product:similar to Hypothetical protein FLJ90219 (Likely ortholog of mouse D11lgp1) [Homo sapiens], full insert sequence Length = 1364 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 279 agccttctcctcctcctcctg 299 ||||||||||||||||||||| Sbjct: 743 agccttctcctcctcctcctg 763
>gb|AY238894.1| Oryza sativa (indica cultivar-group) adenine phosphoribosyltransferase form 2 mRNA, complete cds Length = 1122 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 359 ccggaggaagaagaagaagca 379 ||||||||||||||||||||| Sbjct: 7 ccggaggaagaagaagaagca 27
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 359 ccggaggaagaagaagaagca 379 ||||||||||||||||||||| Sbjct: 25141184 ccggaggaagaagaagaagca 25141204
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 365 gaagaagaagaagcagatgct 385 ||||||||||||||||||||| Sbjct: 20087882 gaagaagaagaagcagatgct 20087862 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 358 accggaggaagaagaagaag 377 |||||||||||||||||||| Sbjct: 24661315 accggaggaagaagaagaag 24661296
>gb|AF316998.1|AF316998 Mus musculus D11lgp1 gene, complete cds Length = 6680 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 279 agccttctcctcctcctcctg 299 ||||||||||||||||||||| Sbjct: 5107 agccttctcctcctcctcctg 5127
>gb|AF316996.1|AF316996 Mus musculus D11lgp1 mRNA, complete cds Length = 2162 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 279 agccttctcctcctcctcctg 299 ||||||||||||||||||||| Sbjct: 1595 agccttctcctcctcctcctg 1615
>gb|AC102461.15| Mus musculus chromosome 8, clone RP24-319H6, complete sequence Length = 169510 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 74 gaacatcattttgtacagaga 94 ||||||||||||||||||||| Sbjct: 36293 gaacatcattttgtacagaga 36313
>gb|AC073918.13|AC073918 Mus musculus 11 BAC RP23-362J7 (Roswell Park Cancer Institute Mouse BAC Library) complete sequence Length = 195667 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 279 agccttctcctcctcctcctg 299 ||||||||||||||||||||| Sbjct: 194698 agccttctcctcctcctcctg 194718
>gb|AY119788.1| Mus musculus SMAD4 (Smad4) gene, complete cds Length = 58218 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 427 gcatggttcttggcctgcttc 447 ||||||||||||||||||||| Sbjct: 12659 gcatggttcttggcctgcttc 12679
>gb|AC136967.1| Papio anubis clone RP41-30N22, complete sequence Length = 194730 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 280 gccttctcctcctcctcctgt 300 ||||||||||||||||||||| Sbjct: 190072 gccttctcctcctcctcctgt 190052
>gb|AC024619.16| Homo sapiens chromosome 17, clone RP11-321A17, complete sequence Length = 198666 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 266 tttaaggagaaaaagccttct 286 ||||||||||||||||||||| Sbjct: 70412 tttaaggagaaaaagccttct 70392
>gb|AY190959.1| Drosophila willistoni clone DWIF01_5_H09 (D1414) genomic sequence Length = 38059 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 361 ggaggaagaagaagaagcaga 381 ||||||||||||||||||||| Sbjct: 31466 ggaggaagaagaagaagcaga 31486
>dbj|AP004847.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1298_H07 Length = 106434 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 365 gaagaagaagaagcagatgct 385 ||||||||||||||||||||| Sbjct: 36405 gaagaagaagaagcagatgct 36385
>dbj|AK121982.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033108N02, full insert sequence Length = 1954 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 359 ccggaggaagaagaagaagca 379 ||||||||||||||||||||| Sbjct: 28 ccggaggaagaagaagaagca 48
>emb|AL606604.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0014K14, complete sequence Length = 150187 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 359 ccggaggaagaagaagaagca 379 ||||||||||||||||||||| Sbjct: 88611 ccggaggaagaagaagaagca 88631
>gb|AC121845.3| Mus musculus BAC clone RP24-82B23 from 5, complete sequence Length = 217530 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 361 ggaggaagaagaagaagcaga 381 ||||||||||||||||||||| Sbjct: 197818 ggaggaagaagaagaagcaga 197838
>ref|NM_031871.1| Mus musculus DNA segment, Chr 11, Lothar Hennighausen 1, expressed (D11Lgp1e), mRNA Length = 2162 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 279 agccttctcctcctcctcctg 299 ||||||||||||||||||||| Sbjct: 1595 agccttctcctcctcctcctg 1615
>emb|AL591466.8| Mouse DNA sequence from clone RP23-279L23 on chromosome 11, complete sequence Length = 239847 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 279 agccttctcctcctcctcctg 299 ||||||||||||||||||||| Sbjct: 229015 agccttctcctcctcctcctg 229035
>dbj|AP001207.3| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1562D12 Length = 153936 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 361 ggaggaagaagaagaagcaga 381 ||||||||||||||||||||| Sbjct: 100653 ggaggaagaagaagaagcaga 100673
>ref|NM_126061.2| Arabidopsis thaliana zinc ion binding AT5G66630 mRNA, complete cds Length = 2411 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 365 gaagaagaagaagcagatgctgca 388 |||||||||||||| ||||||||| Sbjct: 1982 gaagaagaagaagctgatgctgca 1959
>ref|NM_102245.2| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/ zinc ion binding AT1G23980 mRNA, complete cds Length = 1300 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 358 accggaggaagaagaagaag 377 |||||||||||||||||||| Sbjct: 146 accggaggaagaagaagaag 127
>ref|XM_466782.1| Oryza sativa (japonica cultivar-group), mRNA Length = 699 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 358 accggaggaagaagaagaag 377 |||||||||||||||||||| Sbjct: 60 accggaggaagaagaagaag 79
>ref|XM_463033.1| Oryza sativa (japonica cultivar-group), mRNA Length = 342 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 361 ggaggaagaagaagaagcag 380 |||||||||||||||||||| Sbjct: 30 ggaggaagaagaagaagcag 11
>ref|XM_479656.1| Oryza sativa (japonica cultivar-group), mRNA Length = 816 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 361 ggaggaagaagaagaagcag 380 |||||||||||||||||||| Sbjct: 720 ggaggaagaagaagaagcag 701
>ref|NM_015335.2| Homo sapiens thyroid hormone receptor associated protein 2 (THRAP2), mRNA Length = 9546 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 aagccttctcctcctcctcc 297 |||||||||||||||||||| Sbjct: 3876 aagccttctcctcctcctcc 3895
>ref|XM_513384.1| PREDICTED: Pan troglodytes similar to Jumonji domain containing protein 2A (LOC456829), mRNA Length = 2053 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 361 ggaggaagaagaagaagcag 380 |||||||||||||||||||| Sbjct: 1105 ggaggaagaagaagaagcag 1124
>gb|AE017347.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 7, complete sequence Length = 1347793 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 364 ggaagaagaagaagcagatg 383 |||||||||||||||||||| Sbjct: 1024361 ggaagaagaagaagcagatg 1024380
>gb|AY714372.1| Acanthopagrus schlegelii proopiomelanocortin precursor, mRNA, complete cds Length = 933 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 gccttctcctcctcctcctg 299 |||||||||||||||||||| Sbjct: 522 gccttctcctcctcctcctg 503
>gb|AC097447.4| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0042K08, complete sequence Length = 117839 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 gccttctcctcctcctcctg 299 |||||||||||||||||||| Sbjct: 50019 gccttctcctcctcctcctg 50000
>gb|AC103551.7| Oryza sativa chromosome 3 BAC OSJNBb0058G04 genomic sequence, complete sequence Length = 137709 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 361 ggaggaagaagaagaagcag 380 |||||||||||||||||||| Sbjct: 116638 ggaggaagaagaagaagcag 116619
>ref|XM_426848.1| PREDICTED: Gallus gallus similar to Hypothetical protein KIAA0233 (LOC429292), partial mRNA Length = 456 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 363 aggaagaagaagaagcagatgctg 386 |||| ||||||||||||||||||| Sbjct: 429 aggaggaagaagaagcagatgctg 406
>ref|XM_955667.1| Neurospora crassa OR74A hypothetical protein (NCU09670.1) partial mRNA Length = 5721 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 279 agccttctcctcctcctcct 298 |||||||||||||||||||| Sbjct: 4903 agccttctcctcctcctcct 4884
>ref|XM_456805.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0A11297g) partial mRNA Length = 1704 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 362 gaggaagaagaagaagcaga 381 |||||||||||||||||||| Sbjct: 1378 gaggaagaagaagaagcaga 1397
>gb|AC101777.8| Mus musculus chromosome 1, clone RP24-123J3, complete sequence Length = 177788 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 ccttctcctcctcctcctgt 300 |||||||||||||||||||| Sbjct: 86324 ccttctcctcctcctcctgt 86343
>ref|XM_330319.1| Neurospora crassa OR74A hypothetical protein (NCU09670.1) partial mRNA Length = 5721 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 279 agccttctcctcctcctcct 298 |||||||||||||||||||| Sbjct: 4903 agccttctcctcctcctcct 4884
>gb|AC151805.20| Medicago truncatula clone mth2-59n17, complete sequence Length = 143937 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 362 gaggaagaagaagaagcaga 381 |||||||||||||||||||| Sbjct: 52537 gaggaagaagaagaagcaga 52518
>ref|XM_717253.1| Candida albicans SC5314 hypothetical protein (CaO19_12497), mRNA Length = 1080 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 362 gaggaagaagaagaagcaga 381 |||||||||||||||||||| Sbjct: 940 gaggaagaagaagaagcaga 959
>ref|XM_717139.1| Candida albicans SC5314 hypothetical protein (CaO19_5030), mRNA Length = 1080 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 362 gaggaagaagaagaagcaga 381 |||||||||||||||||||| Sbjct: 940 gaggaagaagaagaagcaga 959
>ref|XM_716696.1| Candida albicans SC5314 putative transcription factor (CaO19_1718), mRNA Length = 2748 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 365 gaagaagaagaagcagatgctgcaacta 392 ||||||||||||| |||||| ||||||| Sbjct: 1462 gaagaagaagaagaagatgcagcaacta 1489
>ref|XM_716576.1| Candida albicans SC5314 putative transcription factor (CaO19_9286), mRNA Length = 2748 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 365 gaagaagaagaagcagatgctgcaacta 392 ||||||||||||| |||||| ||||||| Sbjct: 1462 gaagaagaagaagaagatgcagcaacta 1489
>gb|AC139751.2| Mus musculus BAC clone RP24-403E24 from chromosome 17, complete sequence Length = 183224 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 agccttctcctcctcctcct 298 |||||||||||||||||||| Sbjct: 97786 agccttctcctcctcctcct 97805
>ref|NM_018584.4| Homo sapiens calcium/calmodulin-dependent protein kinase II inhibitor 1 (CAMK2N1), mRNA Length = 860 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 279 agccttctcctcctcctcct 298 |||||||||||||||||||| Sbjct: 828 agccttctcctcctcctcct 809
>gb|AY338463.1| Homo sapiens thyroid hormone receptor-associated protein complex 240 kDa component-like mRNA, complete cds Length = 9546 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 aagccttctcctcctcctcc 297 |||||||||||||||||||| Sbjct: 3876 aagccttctcctcctcctcc 3895
>gb|AC170084.13| Medicago truncatula clone mth2-156k10, complete sequence Length = 143943 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 362 gaggaagaagaagaagcaga 381 |||||||||||||||||||| Sbjct: 91404 gaggaagaagaagaagcaga 91423
>gb|AC161530.4| Mus musculus chromosome 18, clone RP24-339M16, complete sequence Length = 168512 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 aaaccccacaaactgaggaa 72 |||||||||||||||||||| Sbjct: 131969 aaaccccacaaactgaggaa 131950
>gb|AC114539.8| Mus musculus chromosome 19, clone RP23-62I23, complete sequence Length = 249767 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 ccttctcctcctcctcctgt 300 |||||||||||||||||||| Sbjct: 245330 ccttctcctcctcctcctgt 245349
>gb|AC159993.10| Mus musculus chromosome 8, clone RP23-39P7, complete sequence Length = 211785 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 330 aaaaggatctagcagtgaag 349 |||||||||||||||||||| Sbjct: 141618 aaaaggatctagcagtgaag 141599
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 361 ggaggaagaagaagaagcag 380 |||||||||||||||||||| Sbjct: 21123608 ggaggaagaagaagaagcag 21123627 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 361 ggaggaagaagaagaagcag 380 |||||||||||||||||||| Sbjct: 15220710 ggaggaagaagaagaagcag 15220729
>gb|AC165346.4| Mus musculus BAC clone RP23-354N5 from chromosome 13, complete sequence Length = 233740 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 ccttctcctcctcctcctgt 300 |||||||||||||||||||| Sbjct: 96191 ccttctcctcctcctcctgt 96172
>gb|AF515599.1| Homo sapiens PROSIT240 mRNA, complete cds Length = 9377 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 aagccttctcctcctcctcc 297 |||||||||||||||||||| Sbjct: 3724 aagccttctcctcctcctcc 3743
>gb|AC115867.12| Mus musculus chromosome 6, clone RP24-326P23, complete sequence Length = 162067 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 362 gaggaagaagaagaagcaga 381 |||||||||||||||||||| Sbjct: 139786 gaggaagaagaagaagcaga 139767
>gb|AC110262.12| Mus musculus chromosome 17, clone RP23-291L10, complete sequence Length = 210850 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 362 gaggaagaagaagaagcaga 381 |||||||||||||||||||| Sbjct: 122471 gaggaagaagaagaagcaga 122452 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 362 gaggaagaagaagaagcaga 381 |||||||||||||||||||| Sbjct: 104390 gaggaagaagaagaagcaga 104371
>gb|AC131521.5| Rattus norvegicus 2 BAC CH230-275M7 (Children's Hospital Oakland Research Institute) complete sequence Length = 191106 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 ccttctcctcctcctcctgt 300 |||||||||||||||||||| Sbjct: 183259 ccttctcctcctcctcctgt 183278 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 ccttctcctcctcctcctgt 300 |||||||||||||||||||| Sbjct: 49973 ccttctcctcctcctcctgt 49992
>ref|XM_534693.2| PREDICTED: Canis familiaris similar to thyroid hormone receptor associated protein 2 (LOC477496), mRNA Length = 8307 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 aagccttctcctcctcctcc 297 |||||||||||||||||||| Sbjct: 3876 aagccttctcctcctcctcc 3895
>ref|XM_851542.1| PREDICTED: Canis familiaris similar to pericentriolar material 1, transcript variant 10 (LOC475618), mRNA Length = 6906 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 362 gaggaagaagaagaagcaga 381 |||||||||||||||||||| Sbjct: 2254 gaggaagaagaagaagcaga 2273
>ref|XM_851501.1| PREDICTED: Canis familiaris similar to pericentriolar material 1, transcript variant 9 (LOC475618), mRNA Length = 6726 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 362 gaggaagaagaagaagcaga 381 |||||||||||||||||||| Sbjct: 2239 gaggaagaagaagaagcaga 2258
>ref|XM_851464.1| PREDICTED: Canis familiaris similar to pericentriolar material 1, transcript variant 8 (LOC475618), mRNA Length = 6960 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 362 gaggaagaagaagaagcaga 381 |||||||||||||||||||| Sbjct: 2239 gaggaagaagaagaagcaga 2258
>ref|XM_851418.1| PREDICTED: Canis familiaris similar to pericentriolar material 1, transcript variant 7 (LOC475618), mRNA Length = 7018 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 362 gaggaagaagaagaagcaga 381 |||||||||||||||||||| Sbjct: 2354 gaggaagaagaagaagcaga 2373
>ref|XM_851378.1| PREDICTED: Canis familiaris similar to pericentriolar material 1, transcript variant 6 (LOC475618), mRNA Length = 6712 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 362 gaggaagaagaagaagcaga 381 |||||||||||||||||||| Sbjct: 2048 gaggaagaagaagaagcaga 2067
>ref|XM_843474.1| PREDICTED: Canis familiaris similar to pericentriolar material 1, transcript variant 2 (LOC475618), mRNA Length = 6783 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 362 gaggaagaagaagaagcaga 381 |||||||||||||||||||| Sbjct: 2137 gaggaagaagaagaagcaga 2156
>ref|XM_851292.1| PREDICTED: Canis familiaris similar to pericentriolar material 1, transcript variant 5 (LOC475618), mRNA Length = 7021 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 362 gaggaagaagaagaagcaga 381 |||||||||||||||||||| Sbjct: 2369 gaggaagaagaagaagcaga 2388
>ref|XM_851252.1| PREDICTED: Canis familiaris similar to pericentriolar material 1, transcript variant 4 (LOC475618), mRNA Length = 7108 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 362 gaggaagaagaagaagcaga 381 |||||||||||||||||||| Sbjct: 2363 gaggaagaagaagaagcaga 2382
>ref|XM_851211.1| PREDICTED: Canis familiaris similar to pericentriolar material 1, transcript variant 3 (LOC475618), mRNA Length = 7135 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 362 gaggaagaagaagaagcaga 381 |||||||||||||||||||| Sbjct: 2471 gaggaagaagaagaagcaga 2490
>ref|XM_532832.2| PREDICTED: Canis familiaris similar to pericentriolar material 1, transcript variant 1 (LOC475618), mRNA Length = 7136 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 362 gaggaagaagaagaagcaga 381 |||||||||||||||||||| Sbjct: 2239 gaggaagaagaagaagcaga 2258
>ref|XM_745717.1| Aspergillus fumigatus Af293 hypothetical protein (Afu6g09220) partial mRNA Length = 3426 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 358 accggaggaagaagaagaag 377 |||||||||||||||||||| Sbjct: 710 accggaggaagaagaagaag 729
>gb|AC127553.3| Mus musculus BAC clone RP24-553F11 from chromosome 5, complete sequence Length = 159693 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 361 ggaggaagaagaagaagcagatgc 384 |||||||||||| ||||||||||| Sbjct: 23940 ggaggaagaagaggaagcagatgc 23917
>gb|AC112523.5| Mus musculus BAC clone RP23-418K6 from chromosome 16, complete sequence Length = 186848 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 caagaaaccccacaaactga 68 |||||||||||||||||||| Sbjct: 145970 caagaaaccccacaaactga 145989
>gb|AC124183.4| Mus musculus BAC clone RP23-213I18 from 13, complete sequence Length = 215251 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 ccttctcctcctcctcctgt 300 |||||||||||||||||||| Sbjct: 198362 ccttctcctcctcctcctgt 198381
>emb|CR712546.2|CNS0GCR2 Tetraodon nigroviridis full-length cDNA Length = 1116 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 ccttctcctcctcctcctgt 300 |||||||||||||||||||| Sbjct: 303 ccttctcctcctcctcctgt 284
>emb|CR680696.2|CNS0FO6C Tetraodon nigroviridis full-length cDNA Length = 1146 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 366 aagaagaagaagcagatgct 385 |||||||||||||||||||| Sbjct: 116 aagaagaagaagcagatgct 135
>emb|CR670802.2|CNS0FGK8 Tetraodon nigroviridis full-length cDNA Length = 1423 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 ccttctcctcctcctcctgt 300 |||||||||||||||||||| Sbjct: 906 ccttctcctcctcctcctgt 887
>emb|CR661457.2|CNS0F9CN Tetraodon nigroviridis full-length cDNA Length = 1423 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 ccttctcctcctcctcctgt 300 |||||||||||||||||||| Sbjct: 907 ccttctcctcctcctcctgt 888
>gb|BT010323.1| Arabidopsis thaliana At1g23980 mRNA, complete cds Length = 1110 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 358 accggaggaagaagaagaag 377 |||||||||||||||||||| Sbjct: 132 accggaggaagaagaagaag 113
>emb|BX088689.8| Human DNA sequence from clone RP11-394M20 on chromosome 1 Contains part of a novel pseudogene and the 3' end of the YAP gene for YY1 associated protein, complete sequence Length = 13236 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 362 gaggaagaagaagaagcaga 381 |||||||||||||||||||| Sbjct: 1966 gaggaagaagaagaagcaga 1947
>emb|AL451140.15| Human DNA sequence from clone RP11-540H22 on chromosome 9 Contains the 5' end of a novel gene and the 3' end of a novel gene, complete sequence Length = 187738 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 364 ggaagaagaagaagcagatg 383 |||||||||||||||||||| Sbjct: 124116 ggaagaagaagaagcagatg 124135
>ref|XM_499614.1| Yarrowia lipolytica CLIB122, YALI0A00374g predicted mRNA Length = 858 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 358 accggaggaagaagaagaagcaga 381 |||||||||||||| ||||||||| Sbjct: 516 accggaggaagaagcagaagcaga 493
>emb|AL391357.20| Human DNA sequence from clone RP11-401M16 on chromosome 1 Contains the gene for calcium/calmodulin-dependent protein kinase II (CaMKIINalpha), the gene for a novel protein (FLJ12875), a ribosomal protein S4 X-linked (RPS4X) pseudogene, the CDA gene for cytidine deaminase, the PINK1 gene for PTEN induced putative kinase 1, a novel gene (FLJ00387), the DDOST gene for dolichyl-diphosphooligosaccharide-protein glycosyltransferase and the 3' end of the KIF17 gene for kinesin family member 17, complete sequence Length = 195076 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 agccttctcctcctcctcct 298 |||||||||||||||||||| Sbjct: 5265 agccttctcctcctcctcct 5284
>emb|AL353807.18| Human DNA sequence from clone RP11-29H23 on chromosome 1 Contains the 5' end of the ASH1L gene for ash1 (absent, small, or homeotic)-like (Drosophila), two novel genes, a pseudogene similar to part of death associated protein 3 (DAP3), the gene for a novel protein (FLJ10504), the 3' end of a novel pseudogene and a CpG island, complete sequence Length = 179064 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 362 gaggaagaagaagaagcaga 381 |||||||||||||||||||| Sbjct: 179030 gaggaagaagaagaagcaga 179011
>gb|AC098697.4| Rattus norvegicus strain Brown Norway clone RP31-387A21, complete sequence Length = 123000 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 tacagagacagcacatgcca 106 |||||||||||||||||||| Sbjct: 51921 tacagagacagcacatgcca 51902
>gb|AC164636.4| Mus musculus BAC clone RP23-70P16 from chromosome 6, complete sequence Length = 212096 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 362 gaggaagaagaagaagcaga 381 |||||||||||||||||||| Sbjct: 120747 gaggaagaagaagaagcaga 120728
>emb|CR382133.1| Debaryomyces hansenii chromosome A of strain CBS767 of Debaryomyces hansenii Length = 1249565 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 362 gaggaagaagaagaagcaga 381 |||||||||||||||||||| Sbjct: 923167 gaggaagaagaagaagcaga 923186 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 362 gaggaagaagaagaagcaga 381 |||||||||||||||||||| Sbjct: 921090 gaggaagaagaagaagcaga 921109
>emb|BX294009.1|NC64C2 Neurospora crassa DNA linkage group V Cosmid contig 64C2 Length = 81866 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 agccttctcctcctcctcct 298 |||||||||||||||||||| Sbjct: 79528 agccttctcctcctcctcct 79547
>emb|AL589738.6| Mouse DNA sequence from clone RP23-322J11 on chromosome 13 Contains the Foxq1 gene for forkhead box Q1 (Hfh1l), two novel genes and two CpG islands, complete sequence Length = 187709 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 gagatgaaataattagcaca 155 |||||||||||||||||||| Sbjct: 22844 gagatgaaataattagcaca 22863
>emb|AL117263.1|LMFL7836 Leishmania major Friedlin chromosome 23 cosmid L7836, complete sequence Length = 36235 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 agccttctcctcctcctcct 298 |||||||||||||||||||| Sbjct: 33058 agccttctcctcctcctcct 33077
>gb|AY204901.1| Homo sapiens calcium/calmodulin-dependent protein kinase II inhibitor alpha (CaMKIINalpha) mRNA, complete cds Length = 860 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 279 agccttctcctcctcctcct 298 |||||||||||||||||||| Sbjct: 828 agccttctcctcctcctcct 809
>emb|AL691451.11| Mouse DNA sequence from clone RP23-249C15 on chromosome 11 Contains a eukaryotic translation initiation factor 3 subunit 6 (Eif3s6) pseudogene, complete sequence Length = 107557 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 ccttctcctcctcctcctgt 300 |||||||||||||||||||| Sbjct: 32822 ccttctcctcctcctcctgt 32841
>gb|AC156982.8| Mus musculus chromosome 19, clone RP23-183N3, complete sequence Length = 216311 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 ccttctcctcctcctcctgt 300 |||||||||||||||||||| Sbjct: 19407 ccttctcctcctcctcctgt 19426
>emb|CR457453.7| Zebrafish DNA sequence from clone CH211-76I17 in linkage group 14, complete sequence Length = 171899 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 363 aggaagaagaagaagcagat 382 |||||||||||||||||||| Sbjct: 134603 aggaagaagaagaagcagat 134622
>emb|AL671983.18| Mouse DNA sequence from clone RP23-232B3 on chromosome X, complete sequence Length = 176577 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 203 cttattttcatgacataacttaac 226 ||||||||||| |||||||||||| Sbjct: 149137 cttattttcatcacataacttaac 149114
>emb|CR749332.1| Homo sapiens mRNA; cDNA DKFZp781D0112 (from clone DKFZp781D0112) Length = 8915 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 aagccttctcctcctcctcc 297 |||||||||||||||||||| Sbjct: 3248 aagccttctcctcctcctcc 3267
>dbj|AB028948.2| Homo sapiens mRNA for KIAA1025 protein, partial cds Length = 8444 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 aagccttctcctcctcctcc 297 |||||||||||||||||||| Sbjct: 2791 aagccttctcctcctcctcc 2810
>gb|AC023729.5| Drosophila melanogaster X BAC RP98-39L4 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 182635 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 467 gatgttgctgttgatgctgc 486 |||||||||||||||||||| Sbjct: 19184 gatgttgctgttgatgctgc 19203
>gb|AC023719.4| Drosophila melanogaster X BAC RP98-4L24 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 187230 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 467 gatgttgctgttgatgctgc 486 |||||||||||||||||||| Sbjct: 100852 gatgttgctgttgatgctgc 100833
>dbj|AK127706.1| Homo sapiens cDNA FLJ45806 fis, clone NT2RI3008179, weakly similar to Homo sapiens thyroid hormone receptor-associated protein, 240 kDa subunit (TRAP240) Length = 3991 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 aagccttctcctcctcctcc 297 |||||||||||||||||||| Sbjct: 3258 aagccttctcctcctcctcc 3277
>emb|CR606015.1| full-length cDNA clone CS0DF018YE24 of Fetal brain of Homo sapiens (human) Length = 1083 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 279 agccttctcctcctcctcct 298 |||||||||||||||||||| Sbjct: 22 agccttctcctcctcctcct 3
>emb|CR604926.1| full-length cDNA clone CS0DF038YH05 of Fetal brain of Homo sapiens (human) Length = 1566 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 279 agccttctcctcctcctcct 298 |||||||||||||||||||| Sbjct: 541 agccttctcctcctcctcct 522
>dbj|AK023837.1| Homo sapiens cDNA FLJ13775 fis, clone PLACE4000369, moderately similar to Homo sapiens thyroid hormone receptor-associated protein complex component TRAP240 mRNA Length = 4829 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 aagccttctcctcctcctcc 297 |||||||||||||||||||| Sbjct: 441 aagccttctcctcctcctcc 460
>ref|NM_132288.1| Drosophila melanogaster CG15365-RA (CG15365), mRNA Length = 2466 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 467 gatgttgctgttgatgctgc 486 |||||||||||||||||||| Sbjct: 808 gatgttgctgttgatgctgc 789
>gb|AC093283.3| Homo sapiens chromosome 5 clone RP11-428C6, complete sequence Length = 206254 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 atgaaataattagcacacaa 158 |||||||||||||||||||| Sbjct: 124794 atgaaataattagcacacaa 124775
>gb|AC093294.3| Homo sapiens chromosome 5 clone RP11-524C16, complete sequence Length = 171739 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 496 ctgctactgttgtggcattt 515 |||||||||||||||||||| Sbjct: 69538 ctgctactgttgtggcattt 69557
>gb|AC104533.3| Homo sapiens chromosome 19 clone LLNLR-276C7, complete sequence Length = 32074 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 362 gaggaagaagaagaagcaga 381 |||||||||||||||||||| Sbjct: 27046 gaggaagaagaagaagcaga 27027
>dbj|AK137555.1| Mus musculus adult male bone cDNA, RIKEN full-length enriched library, clone:9830141A22 product:CUG triplet repeat,RNA binding protein 2, full insert sequence Length = 4106 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 143 aataattagcacacaaaaaccctt 166 |||||||||||||||||| ||||| Sbjct: 1814 aataattagcacacaaaatccctt 1837
>gb|AC096674.3| Homo sapiens chromosome 1 clone RP11-59A2, complete sequence Length = 176747 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 ccttctcctcctcctcctgt 300 |||||||||||||||||||| Sbjct: 135430 ccttctcctcctcctcctgt 135411
>ref|XM_694839.1| PREDICTED: Danio rerio hypothetical protein LOC553462 (LOC553462), mRNA Length = 915 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 361 ggaggaagaagaagaagcag 380 |||||||||||||||||||| Sbjct: 486 ggaggaagaagaagaagcag 505
>gb|AC022138.5| Homo sapiens chromosome 5 clone CTD-2252A20, complete sequence Length = 174627 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 atgaaataattagcacacaa 158 |||||||||||||||||||| Sbjct: 168829 atgaaataattagcacacaa 168848
>gb|AC161756.3| Mus musculus BAC clone RP24-106J5 from chromosome 16, complete sequence Length = 219500 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 ataatttaaggagaaaaagc 281 |||||||||||||||||||| Sbjct: 145927 ataatttaaggagaaaaagc 145946
>gb|BC020630.1| Homo sapiens calcium/calmodulin-dependent protein kinase II inhibitor 1, mRNA (cDNA clone MGC:22256 IMAGE:4703846), complete cds Length = 1377 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 279 agccttctcctcctcctcct 298 |||||||||||||||||||| Sbjct: 270 agccttctcctcctcctcct 251
>ref|XM_572072.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 7 Length = 1869 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 364 ggaagaagaagaagcagatg 383 |||||||||||||||||||| Sbjct: 1769 ggaagaagaagaagcagatg 1788
>gb|AC154646.2| Mus musculus BAC clone RP23-283B12 from chromosome 14, complete sequence Length = 189102 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 361 ggaggaagaagaagaagcag 380 |||||||||||||||||||| Sbjct: 60455 ggaggaagaagaagaagcag 60474
>gb|AC128645.5| Oryza sativa chromosome 3 BAC OSJNBb0016P23 genomic sequence, complete sequence Length = 131250 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 361 ggaggaagaagaagaagcag 380 |||||||||||||||||||| Sbjct: 101364 ggaggaagaagaagaagcag 101383
>gb|AF314193.1| Drosophila melanogaster Toutatis (tou) gene, complete cds Length = 39574 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 361 ggaggaagaagaagaagcag 380 |||||||||||||||||||| Sbjct: 12871 ggaggaagaagaagaagcag 12852
>gb|AC155830.7| Mus musculus 10 BAC RP24-495I3 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 189267 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 ccttctcctcctcctcctgt 300 |||||||||||||||||||| Sbjct: 145496 ccttctcctcctcctcctgt 145515
>gb|AC004597.1|AC004597 Homo sapiens chromosome 19, cosmid F20722, complete sequence Length = 43310 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 362 gaggaagaagaagaagcaga 381 |||||||||||||||||||| Sbjct: 10200 gaggaagaagaagaagcaga 10181
>gb|AC008491.6|AC008491 Homo sapiens chromosome 5 clone CTC-426L22, complete sequence Length = 143661 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 106 actctcacatctgtgataaa 125 |||||||||||||||||||| Sbjct: 89987 actctcacatctgtgataaa 90006
>gb|AY817054.1| Haliaeetus albicilla clone Hal 15 microsatellite sequences Length = 639 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 ccttctcctcctcctcctgt 300 |||||||||||||||||||| Sbjct: 329 ccttctcctcctcctcctgt 310
>dbj|AK047603.1| Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:B930097H22 product:suppressor of fused homolog (Drosophila), full insert sequence Length = 2668 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 ccttctcctcctcctcctgt 300 |||||||||||||||||||| Sbjct: 1396 ccttctcctcctcctcctgt 1415
>gb|BC095704.1| Danio rerio hypothetical protein LOC553462, mRNA (cDNA clone IMAGE:7237003), partial cds Length = 968 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 361 ggaggaagaagaagaagcag 380 |||||||||||||||||||| Sbjct: 492 ggaggaagaagaagaagcag 511
>emb|BX930437.2| Gallus gallus finished cDNA, clone ChEST619p23 Length = 975 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 279 agccttctcctcctcctcct 298 |||||||||||||||||||| Sbjct: 456 agccttctcctcctcctcct 437
>gb|AF116637.1|AF116637 Homo sapiens PRO1489 mRNA, complete cds Length = 1321 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 agccttctcctcctcctcct 298 |||||||||||||||||||| Sbjct: 1027 agccttctcctcctcctcct 1046
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 gccttctcctcctcctcctg 299 |||||||||||||||||||| Sbjct: 3935251 gccttctcctcctcctcctg 3935232
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 279 agccttctcctcctcctcct 298 |||||||||||||||||||| Sbjct: 1985453 agccttctcctcctcctcct 1985434 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 361 ggaggaagaagaagaagcag 380 |||||||||||||||||||| Sbjct: 132828 ggaggaagaagaagaagcag 132809
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 361 ggaggaagaagaagaagcag 380 |||||||||||||||||||| Sbjct: 21116637 ggaggaagaagaagaagcag 21116656 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 361 ggaggaagaagaagaagcag 380 |||||||||||||||||||| Sbjct: 15215244 ggaggaagaagaagaagcag 15215263
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 275 aaaaagccttctcctcctcctcct 298 ||||||||| |||||||||||||| Sbjct: 24281212 aaaaagcctcctcctcctcctcct 24281189 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 gccttctcctcctcctcctg 299 |||||||||||||||||||| Sbjct: 2125417 gccttctcctcctcctcctg 2125398
>gb|AC010315.6|AC010315 Homo sapiens chromosome 5 clone CTB-84H20, complete sequence Length = 65705 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 106 actctcacatctgtgataaa 125 |||||||||||||||||||| Sbjct: 31980 actctcacatctgtgataaa 31999
>gb|AC011696.4|AC011696 Drosophila melanogaster, chromosome 2R, region 48A-48C, BAC clone BACR35F01, complete sequence Length = 170869 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 361 ggaggaagaagaagaagcag 380 |||||||||||||||||||| Sbjct: 20814 ggaggaagaagaagaagcag 20833
>gb|AC007473.10|AC007473 Drosophila melanogaster, chromosome 2R, region 48A-48B, BAC clone BACR38D12, complete sequence Length = 171831 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 361 ggaggaagaagaagaagcag 380 |||||||||||||||||||| Sbjct: 61133 ggaggaagaagaagaagcag 61152
>gb|AC009350.4|AC009350 Drosophila melanogaster, chromosome 3R, region 85D-85E, BAC clone BACR19N07, complete sequence Length = 176933 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 ccttctcctcctcctcctgt 300 |||||||||||||||||||| Sbjct: 171561 ccttctcctcctcctcctgt 171542
>gb|AC008315.9|AC008315 Drosophila melanogaster, chromosome 3R, region 85E-85E, BAC clone BACR30F01, complete sequence Length = 177028 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 ccttctcctcctcctcctgt 300 |||||||||||||||||||| Sbjct: 44870 ccttctcctcctcctcctgt 44851
>gb|AC153377.5| Mus musculus 6 BAC RP23-380O16 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 195618 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 ccttctcctcctcctcctgt 300 |||||||||||||||||||| Sbjct: 81228 ccttctcctcctcctcctgt 81247
>gb|AC158234.2| Mus musculus BAC clone RP23-149C23 from chromosome 16, complete sequence Length = 227632 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 caagaaaccccacaaactga 68 |||||||||||||||||||| Sbjct: 40880 caagaaaccccacaaactga 40861
>ref|NM_134377.1| Rattus norvegicus calsyntenin 2 (Clstn2), mRNA Length = 2920 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 362 gaggaagaagaagaagcaga 381 |||||||||||||||||||| Sbjct: 2722 gaggaagaagaagaagcaga 2741
>gb|AC084590.1|CBRG41N04 Caenorhabditis briggsae cosmid G41N04, complete sequence Length = 34978 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 361 ggaggaagaagaagaagcag 380 |||||||||||||||||||| Sbjct: 8475 ggaggaagaagaagaagcag 8456
>gb|AC025226.4|AC025226 Homo sapiens BAC clone RP11-57J19 from Y, complete sequence Length = 168066 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 ccttctcctcctcctcctgt 300 |||||||||||||||||||| Sbjct: 35401 ccttctcctcctcctcctgt 35420
>gb|BT003163.1| Arabidopsis thaliana At5g66630 mRNA, complete cds Length = 2109 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 365 gaagaagaagaagcagatgctgca 388 |||||||||||||| ||||||||| Sbjct: 1910 gaagaagaagaagctgatgctgca 1887
>ref|XM_238213.3| PREDICTED: Rattus norvegicus delangin (predicted) (NIPBL_predicted), mRNA Length = 9778 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 361 ggaggaagaagaagaagcag 380 |||||||||||||||||||| Sbjct: 220 ggaggaagaagaagaagcag 239
>gb|AF259391.1|AF259391 Crisia denticulata Cd7-2b microsatellite sequence Length = 688 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 gcacacaaaaacccttgtga 170 |||||||||||||||||||| Sbjct: 393 gcacacaaaaacccttgtga 412
>gb|AC002423.3|AC002423 Genomic sequence for Arabidopsis thaliana BAC T23E23, complete sequence Length = 99254 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 358 accggaggaagaagaagaag 377 |||||||||||||||||||| Sbjct: 60337 accggaggaagaagaagaag 60356
>gb|AC012157.21| Homo sapiens 12 BAC RP11-493P1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 165833 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 aagccttctcctcctcctcc 297 |||||||||||||||||||| Sbjct: 154316 aagccttctcctcctcctcc 154297
>emb|BX088525.4| Zebrafish DNA sequence from clone DKEYP-51F8 in linkage group 10, complete sequence Length = 212133 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 465 aggatgttgctgttgatgct 484 |||||||||||||||||||| Sbjct: 132388 aggatgttgctgttgatgct 132407
>dbj|AP003314.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0046B10 Length = 142596 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 275 aaaaagccttctcctcctcctcct 298 ||||||||| |||||||||||||| Sbjct: 105776 aaaaagcctcctcctcctcctcct 105753
>dbj|AP002913.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0480E02 Length = 141862 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 gccttctcctcctcctcctg 299 |||||||||||||||||||| Sbjct: 46529 gccttctcctcctcctcctg 46510
>dbj|AP002866.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0410E01 Length = 166753 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 275 aaaaagccttctcctcctcctcct 298 ||||||||| |||||||||||||| Sbjct: 27116 aaaaagcctcctcctcctcctcct 27093
>dbj|AK174131.1| Ciona intestinalis cDNA, clone:cibd005d17, full insert sequence Length = 1271 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 493 ttgctgctactgttgtggca 512 |||||||||||||||||||| Sbjct: 38 ttgctgctactgttgtggca 57
>dbj|AP004654.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0015C07 Length = 149079 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 361 ggaggaagaagaagaagcag 380 |||||||||||||||||||| Sbjct: 48163 ggaggaagaagaagaagcag 48144
>dbj|AP004059.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1372_D06 Length = 129242 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 358 accggaggaagaagaagaag 377 |||||||||||||||||||| Sbjct: 42713 accggaggaagaagaagaag 42694
>dbj|AP004083.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1212_C01 Length = 124548 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 358 accggaggaagaagaagaag 377 |||||||||||||||||||| Sbjct: 105864 accggaggaagaagaagaag 105845
>dbj|AP005620.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0680F05 Length = 185495 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 279 agccttctcctcctcctcct 298 |||||||||||||||||||| Sbjct: 110651 agccttctcctcctcctcct 110632
>dbj|AP005618.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0509D04 Length = 140666 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 279 agccttctcctcctcctcct 298 |||||||||||||||||||| Sbjct: 134488 agccttctcctcctcctcct 134469
>gb|AC117540.9| Mus musculus chromosome 18, clone RP23-131B4, complete sequence Length = 198854 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 aaaccccacaaactgaggaa 72 |||||||||||||||||||| Sbjct: 1048 aaaccccacaaactgaggaa 1067
>dbj|AK119101.1| Arabidopsis thaliana At1g23980 mRNA for unknown protein, complete cds, clone: RAFL21-45-G23 Length = 1300 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 358 accggaggaagaagaagaag 377 |||||||||||||||||||| Sbjct: 146 accggaggaagaagaagaag 127
>dbj|AB018119.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MSN2 Length = 62927 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 365 gaagaagaagaagcagatgctgca 388 |||||||||||||| ||||||||| Sbjct: 897 gaagaagaagaagctgatgctgca 874
>gb|AF194967.1|AF194967 Acanthopagrus latus proopiomelanocortin (POMC) mRNA, complete cds Length = 852 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 gccttctcctcctcctcctg 299 |||||||||||||||||||| Sbjct: 545 gccttctcctcctcctcctg 526
>emb|AJ271735.1|HSA271735 Homo sapiens Xq pseudoautosomal region; segment 1/2 Length = 240000 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 ccttctcctcctcctcctgt 300 |||||||||||||||||||| Sbjct: 135434 ccttctcctcctcctcctgt 135415
>dbj|AK066561.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013073D14, full insert sequence Length = 2396 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 275 aaaaagccttctcctcctcctcct 298 ||||||||| |||||||||||||| Sbjct: 207 aaaaagcctcctcctcctcctcct 230
>gb|AC154526.2| Mus musculus BAC clone RP24-69I14 from 16, complete sequence Length = 219420 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 ataatttaaggagaaaaagc 281 |||||||||||||||||||| Sbjct: 25013 ataatttaaggagaaaaagc 25032
>dbj|AK062906.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-108-F10, full insert sequence Length = 756 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 275 aaaaagccttctcctcctcctcct 298 ||||||||| |||||||||||||| Sbjct: 200 aaaaagcctcctcctcctcctcct 223
>emb|AL732455.6| Zebrafish DNA sequence from clone CH211-225J17 in linkage group 7, complete sequence Length = 192578 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 276 aaaagccttctcctcctcctcctg 299 ||||| |||||||||||||||||| Sbjct: 123225 aaaagtcttctcctcctcctcctg 123202
>emb|BX005071.4| Zebrafish DNA sequence from clone CH211-139O14 in linkage group 7, complete sequence Length = 174225 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 276 aaaagccttctcctcctcctcctg 299 ||||| |||||||||||||||||| Sbjct: 117680 aaaagtcttctcctcctcctcctg 117703
>emb|AL132865.1|CEY62E10A Caenorhabditis elegans YAC Y62E10A, complete sequence Length = 57237 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 362 gaggaagaagaagaagcaga 381 |||||||||||||||||||| Sbjct: 36255 gaggaagaagaagaagcaga 36274
>emb|X53858.1|RNTTF1 Rat TTF-1 mRNA for thyroid nuclear factor 1 Length = 2326 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 362 gaggaagaagaagaagcaga 381 |||||||||||||||||||| Sbjct: 1501 gaggaagaagaagaagcaga 1482
>emb|AJ427342.1|RNO427342 Rattus norvegicus mRNA for calsyntenin-2 protein (cs2 gene) Length = 2920 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 362 gaggaagaagaagaagcaga 381 |||||||||||||||||||| Sbjct: 2722 gaggaagaagaagaagcaga 2741
>gb|AE003683.3| Drosophila melanogaster chromosome 3R, section 21 of 118 of the complete sequence Length = 243348 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 ccttctcctcctcctcctgt 300 |||||||||||||||||||| Sbjct: 200728 ccttctcctcctcctcctgt 200709
>gb|AE003825.3| Drosophila melanogaster chromosome 2R, section 25 of 73 of the complete sequence Length = 261690 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 361 ggaggaagaagaagaagcag 380 |||||||||||||||||||| Sbjct: 139306 ggaggaagaagaagaagcag 139325
>emb|AJ308633.1|MMU308633 Mus musculus partial Sufu gene for suppressor of fused homolog (Drosophila), exon 10 Length = 252 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 ccttctcctcctcctcctgt 300 |||||||||||||||||||| Sbjct: 184 ccttctcctcctcctcctgt 203
>gb|AE003446.4| Drosophila melanogaster chromosome X, section 30 of 74 of the complete sequence Length = 290970 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 467 gatgttgctgttgatgctgc 486 |||||||||||||||||||| Sbjct: 8125 gatgttgctgttgatgctgc 8144
>gb|AC108404.8| Mus musculus chromosome 18, clone RP24-491I16, complete sequence Length = 196638 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 agccttctcctcctcctcct 298 |||||||||||||||||||| Sbjct: 171181 agccttctcctcctcctcct 171200
>emb|CT574593.2| Pan troglodytes chromosome X clone RP43-059H19 map Xq28, complete sequence Length = 151142 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 ccttctcctcctcctcctgt 300 |||||||||||||||||||| Sbjct: 1797 ccttctcctcctcctcctgt 1816
>gb|AC104328.10| Mus musculus strain C57BL/6J chromosome 18 clone rp23-352p20, complete sequence Length = 183187 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 279 agccttctcctcctcctcct 298 |||||||||||||||||||| Sbjct: 163573 agccttctcctcctcctcct 163554
>gb|AC110037.13| Mus musculus chromosome 5, clone RP23-257E17, complete sequence Length = 177428 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 361 ggaggaagaagaagaagcagatgc 384 |||||||||||| ||||||||||| Sbjct: 64758 ggaggaagaagaggaagcagatgc 64781
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 gccttctcctcctcctcctg 299 |||||||||||||||||||| Sbjct: 3935172 gccttctcctcctcctcctg 3935153
>gb|AC115876.18| Mus musculus chromosome 1, clone RP24-356G6, complete sequence Length = 163698 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 gccttctcctcctcctcctg 299 |||||||||||||||||||| Sbjct: 129685 gccttctcctcctcctcctg 129666
>emb|CT030739.10| Mouse DNA sequence from clone RP24-496K8 on chromosome 13, complete sequence Length = 192075 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 281 ccttctcctcctcctcctgtactc 304 |||||||||||||||||| ||||| Sbjct: 81075 ccttctcctcctcctcctctactc 81052
>emb|AL845492.10| Mouse DNA sequence from clone RP23-222P7 on chromosome 2, complete sequence Length = 225684 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 143 aataattagcacacaaaaaccctt 166 |||||||||||||||||| ||||| Sbjct: 108694 aataattagcacacaaaatccctt 108671
>emb|AL845455.7| Mouse DNA sequence from clone RP23-325E4 on chromosome 2, complete sequence Length = 143689 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 ccttctcctcctcctcctgt 300 |||||||||||||||||||| Sbjct: 105947 ccttctcctcctcctcctgt 105928
>dbj|AP006627.1| Bacillus clausii KSM-K16 DNA, complete genome Length = 4303871 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 473 gctgttgatgctgccgtggc 492 |||||||||||||||||||| Sbjct: 2267648 gctgttgatgctgccgtggc 2267629
>emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB122 of Yarrowia lipolytica Length = 2303261 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 358 accggaggaagaagaagaagcaga 381 |||||||||||||| ||||||||| Sbjct: 42980 accggaggaagaagcagaagcaga 43003
>emb|AL683800.9| Mouse DNA sequence from clone RP23-405B8 on chromosome X, complete sequence Length = 198175 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 279 agccttctcctcctcctcct 298 |||||||||||||||||||| Sbjct: 90231 agccttctcctcctcctcct 90212
>emb|AL831766.3| Mouse DNA sequence from clone RP23-209N3 on chromosome 2, complete sequence Length = 178227 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 117 tgtgataaatatgcaaagtg 136 |||||||||||||||||||| Sbjct: 105641 tgtgataaatatgcaaagtg 105660
>emb|AL672052.7| Mouse DNA sequence from clone RP23-60A20 on chromosome X, complete sequence Length = 178995 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 ccttctcctcctcctcctgt 300 |||||||||||||||||||| Sbjct: 91167 ccttctcctcctcctcctgt 91148
>emb|AL133033.1|HSM801300 Homo sapiens mRNA; cDNA DKFZp586E041 (from clone DKFZp586E041); partial cds Length = 8434 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 aagccttctcctcctcctcc 297 |||||||||||||||||||| Sbjct: 2764 aagccttctcctcctcctcc 2783
>emb|X67491.1|HSGLUDP5 H.sapiens gene for glutamate dehydrogenase Length = 2679 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 264 aatttaaggagaaaaagcct 283 |||||||||||||||||||| Sbjct: 609 aatttaaggagaaaaagcct 590
>dbj|AB020971.1| Thunnus obesus mRNA for proopiomelanocortin, complete cds Length = 1084 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 279 agccttctcctcctcctcct 298 |||||||||||||||||||| Sbjct: 567 agccttctcctcctcctcct 548 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8,334,126 Number of Sequences: 3902068 Number of extensions: 8334126 Number of successful extensions: 591726 Number of sequences better than 10.0: 225 Number of HSP's better than 10.0 without gapping: 228 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 587545 Number of HSP's gapped (non-prelim): 4118 length of query: 592 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 569 effective length of database: 17,143,297,704 effective search space: 9754536393576 effective search space used: 9754536393576 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
