ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd22h23
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CP7A1_RABIT (P51542) Cytochrome P450 7A1 (EC 1.14.13.17) (Choles... 31 1.3
2GGT1_PIG (P20735) Gamma-glutamyltranspeptidase 1 precursor (EC 2... 30 3.9
3ADT1_RAT (Q05962) ADP/ATP translocase 1 (Adenine nucleotide tran... 29 6.7
4ADT1_MOUSE (P48962) ADP/ATP translocase 1 (Adenine nucleotide tr... 29 6.7
5ADT1_HUMAN (P12235) ADP/ATP translocase 1 (Adenine nucleotide tr... 29 6.7
6SYS_PYRAE (Q8ZTP4) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--... 28 8.7
7ADT1_RABIT (O46373) ADP/ATP translocase 1 (Adenine nucleotide tr... 28 8.7
8ADT1_BOVIN (P02722) ADP/ATP translocase 1 (Adenine nucleotide tr... 28 8.7

>CP7A1_RABIT (P51542) Cytochrome P450 7A1 (EC 1.14.13.17) (Cholesterol|
           7-alpha-monooxygenase) (CYPVII) (Cholesterol
           7-alpha-hydroxylase)
          Length = 501

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 12/28 (42%), Positives = 14/28 (50%), Gaps = 6/28 (21%)
 Frame = -2

Query: 344 WTWG------CCLWLLCSSRNKRAAGPP 279
           W WG      CCLWL+   R +R   PP
Sbjct: 6   WIWGICLSVCCCLWLILGLRRRRMGEPP 33



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>GGT1_PIG (P20735) Gamma-glutamyltranspeptidase 1 precursor (EC 2.3.2.2)|
           (Gamma-glutamyltransferase 1) (GGT 1) (CD224 antigen)
           [Contains: Gamma-glutamyltranspeptidase 1 heavy chain;
           Gamma-glutamyltranspeptidase 1 light chain]
          Length = 568

 Score = 29.6 bits (65), Expect = 3.9
 Identities = 23/58 (39%), Positives = 28/58 (48%), Gaps = 12/58 (20%)
 Frame = -2

Query: 335 GCCLWLLCSSR-----NKRAAGPPDAIR-------TDRDSGFAVSASKAQLLLITSQN 198
           G CLWL  +S+       RAA   DA+R       T RD G AV A+ A LL +   N
Sbjct: 21  GLCLWLPSNSKPHNHVYPRAAVAADALRCSEIGRDTLRDGGSAVDAAIAALLCVGLMN 78



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>ADT1_RAT (Q05962) ADP/ATP translocase 1 (Adenine nucleotide translocator 1)|
           (ANT 1) (ADP,ATP carrier protein 1) (Solute carrier
           family 25 member 4)
          Length = 297

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 19/50 (38%), Positives = 27/50 (54%)
 Frame = +2

Query: 284 VLRLAYFGNYIKARGSIPRSKDVCARCSFVAHQKGVTCIDFAGRA*FPLD 433
           + R AYFG Y  A+G +P  K+V    S++  Q  VT +  AG   +P D
Sbjct: 185 IYRAAYFGVYDTAKGMLPDPKNVHIIVSWMIAQ-SVTAV--AGLVSYPFD 231



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>ADT1_MOUSE (P48962) ADP/ATP translocase 1 (Adenine nucleotide translocator 1)|
           (ANT 1) (ADP,ATP carrier protein 1) (Solute carrier
           family 25 member 4) (ADP,ATP carrier protein,
           heart/skeletal muscle isoform T1) (mANC1)
          Length = 297

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 19/50 (38%), Positives = 27/50 (54%)
 Frame = +2

Query: 284 VLRLAYFGNYIKARGSIPRSKDVCARCSFVAHQKGVTCIDFAGRA*FPLD 433
           + R AYFG Y  A+G +P  K+V    S++  Q  VT +  AG   +P D
Sbjct: 185 IYRAAYFGVYDTAKGMLPDPKNVHIIVSWMIAQ-SVTAV--AGLVSYPFD 231



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>ADT1_HUMAN (P12235) ADP/ATP translocase 1 (Adenine nucleotide translocator 1)|
           (ANT 1) (ADP,ATP carrier protein 1) (Solute carrier
           family 25 member 4) (ADP,ATP carrier protein,
           heart/skeletal muscle isoform T1)
          Length = 297

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 19/50 (38%), Positives = 27/50 (54%)
 Frame = +2

Query: 284 VLRLAYFGNYIKARGSIPRSKDVCARCSFVAHQKGVTCIDFAGRA*FPLD 433
           + R AYFG Y  A+G +P  K+V    S++  Q  VT +  AG   +P D
Sbjct: 185 IYRAAYFGVYDTAKGMLPDPKNVHIFVSWMIAQ-SVTAV--AGLVSYPFD 231



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>SYS_PYRAE (Q8ZTP4) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase)|
           (SerRS)
          Length = 451

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 18/70 (25%), Positives = 29/70 (41%)
 Frame = +1

Query: 238 DTANPESRSVRMASGGPAARLFRELHKSQRQHPQVQGRLCSMLIRRSPKRRYLHRLCWPG 417
           D   P ++   +    P+  ++REL            RL   + R+  KR Y+H L   G
Sbjct: 342 DLGAPAAKKYDIEVWYPSQGMYRELASCSNVTDWQSYRLGIRVTRKGMKREYVHTLNCTG 401

Query: 418 LVPARSLLGI 447
           L   R++  I
Sbjct: 402 LATTRTITAI 411



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>ADT1_RABIT (O46373) ADP/ATP translocase 1 (Adenine nucleotide translocator 1)|
           (ANT 1) (ADP,ATP carrier protein 1) (Solute carrier
           family 25 member 4) (30 kDa calsequestrin-binding
           protein) (CSQ-binding 30 kDa protein)
          Length = 297

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 18/50 (36%), Positives = 25/50 (50%)
 Frame = +2

Query: 284 VLRLAYFGNYIKARGSIPRSKDVCARCSFVAHQKGVTCIDFAGRA*FPLD 433
           + R AYFG Y  A+G +P  K+V    S++  Q   T    AG   +P D
Sbjct: 185 IYRAAYFGVYDTAKGMLPDPKNVHIIVSWMIAQ---TVTAVAGLVSYPFD 231



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>ADT1_BOVIN (P02722) ADP/ATP translocase 1 (Adenine nucleotide translocator 1)|
           (ANT 1) (ADP,ATP carrier protein 1) (Solute carrier
           family 25 member 4) (ADP,ATP carrier protein, heart
           isoform T1)
          Length = 297

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 18/50 (36%), Positives = 25/50 (50%)
 Frame = +2

Query: 284 VLRLAYFGNYIKARGSIPRSKDVCARCSFVAHQKGVTCIDFAGRA*FPLD 433
           + R AYFG Y  A+G +P  K+V    S++  Q   T    AG   +P D
Sbjct: 185 IYRAAYFGVYDTAKGMLPDPKNVHIIVSWMIAQ---TVTAVAGLVSYPFD 231


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,337,495
Number of Sequences: 219361
Number of extensions: 1248862
Number of successful extensions: 3221
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3143
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3219
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2968155324
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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