Clone Name | rbasd22h23 |
---|---|
Clone Library Name | barley_pub |
>CP7A1_RABIT (P51542) Cytochrome P450 7A1 (EC 1.14.13.17) (Cholesterol| 7-alpha-monooxygenase) (CYPVII) (Cholesterol 7-alpha-hydroxylase) Length = 501 Score = 31.2 bits (69), Expect = 1.3 Identities = 12/28 (42%), Positives = 14/28 (50%), Gaps = 6/28 (21%) Frame = -2 Query: 344 WTWG------CCLWLLCSSRNKRAAGPP 279 W WG CCLWL+ R +R PP Sbjct: 6 WIWGICLSVCCCLWLILGLRRRRMGEPP 33
>GGT1_PIG (P20735) Gamma-glutamyltranspeptidase 1 precursor (EC 2.3.2.2)| (Gamma-glutamyltransferase 1) (GGT 1) (CD224 antigen) [Contains: Gamma-glutamyltranspeptidase 1 heavy chain; Gamma-glutamyltranspeptidase 1 light chain] Length = 568 Score = 29.6 bits (65), Expect = 3.9 Identities = 23/58 (39%), Positives = 28/58 (48%), Gaps = 12/58 (20%) Frame = -2 Query: 335 GCCLWLLCSSR-----NKRAAGPPDAIR-------TDRDSGFAVSASKAQLLLITSQN 198 G CLWL +S+ RAA DA+R T RD G AV A+ A LL + N Sbjct: 21 GLCLWLPSNSKPHNHVYPRAAVAADALRCSEIGRDTLRDGGSAVDAAIAALLCVGLMN 78
>ADT1_RAT (Q05962) ADP/ATP translocase 1 (Adenine nucleotide translocator 1)| (ANT 1) (ADP,ATP carrier protein 1) (Solute carrier family 25 member 4) Length = 297 Score = 28.9 bits (63), Expect = 6.7 Identities = 19/50 (38%), Positives = 27/50 (54%) Frame = +2 Query: 284 VLRLAYFGNYIKARGSIPRSKDVCARCSFVAHQKGVTCIDFAGRA*FPLD 433 + R AYFG Y A+G +P K+V S++ Q VT + AG +P D Sbjct: 185 IYRAAYFGVYDTAKGMLPDPKNVHIIVSWMIAQ-SVTAV--AGLVSYPFD 231
>ADT1_MOUSE (P48962) ADP/ATP translocase 1 (Adenine nucleotide translocator 1)| (ANT 1) (ADP,ATP carrier protein 1) (Solute carrier family 25 member 4) (ADP,ATP carrier protein, heart/skeletal muscle isoform T1) (mANC1) Length = 297 Score = 28.9 bits (63), Expect = 6.7 Identities = 19/50 (38%), Positives = 27/50 (54%) Frame = +2 Query: 284 VLRLAYFGNYIKARGSIPRSKDVCARCSFVAHQKGVTCIDFAGRA*FPLD 433 + R AYFG Y A+G +P K+V S++ Q VT + AG +P D Sbjct: 185 IYRAAYFGVYDTAKGMLPDPKNVHIIVSWMIAQ-SVTAV--AGLVSYPFD 231
>ADT1_HUMAN (P12235) ADP/ATP translocase 1 (Adenine nucleotide translocator 1)| (ANT 1) (ADP,ATP carrier protein 1) (Solute carrier family 25 member 4) (ADP,ATP carrier protein, heart/skeletal muscle isoform T1) Length = 297 Score = 28.9 bits (63), Expect = 6.7 Identities = 19/50 (38%), Positives = 27/50 (54%) Frame = +2 Query: 284 VLRLAYFGNYIKARGSIPRSKDVCARCSFVAHQKGVTCIDFAGRA*FPLD 433 + R AYFG Y A+G +P K+V S++ Q VT + AG +P D Sbjct: 185 IYRAAYFGVYDTAKGMLPDPKNVHIFVSWMIAQ-SVTAV--AGLVSYPFD 231
>SYS_PYRAE (Q8ZTP4) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase)| (SerRS) Length = 451 Score = 28.5 bits (62), Expect = 8.7 Identities = 18/70 (25%), Positives = 29/70 (41%) Frame = +1 Query: 238 DTANPESRSVRMASGGPAARLFRELHKSQRQHPQVQGRLCSMLIRRSPKRRYLHRLCWPG 417 D P ++ + P+ ++REL RL + R+ KR Y+H L G Sbjct: 342 DLGAPAAKKYDIEVWYPSQGMYRELASCSNVTDWQSYRLGIRVTRKGMKREYVHTLNCTG 401 Query: 418 LVPARSLLGI 447 L R++ I Sbjct: 402 LATTRTITAI 411
>ADT1_RABIT (O46373) ADP/ATP translocase 1 (Adenine nucleotide translocator 1)| (ANT 1) (ADP,ATP carrier protein 1) (Solute carrier family 25 member 4) (30 kDa calsequestrin-binding protein) (CSQ-binding 30 kDa protein) Length = 297 Score = 28.5 bits (62), Expect = 8.7 Identities = 18/50 (36%), Positives = 25/50 (50%) Frame = +2 Query: 284 VLRLAYFGNYIKARGSIPRSKDVCARCSFVAHQKGVTCIDFAGRA*FPLD 433 + R AYFG Y A+G +P K+V S++ Q T AG +P D Sbjct: 185 IYRAAYFGVYDTAKGMLPDPKNVHIIVSWMIAQ---TVTAVAGLVSYPFD 231
>ADT1_BOVIN (P02722) ADP/ATP translocase 1 (Adenine nucleotide translocator 1)| (ANT 1) (ADP,ATP carrier protein 1) (Solute carrier family 25 member 4) (ADP,ATP carrier protein, heart isoform T1) Length = 297 Score = 28.5 bits (62), Expect = 8.7 Identities = 18/50 (36%), Positives = 25/50 (50%) Frame = +2 Query: 284 VLRLAYFGNYIKARGSIPRSKDVCARCSFVAHQKGVTCIDFAGRA*FPLD 433 + R AYFG Y A+G +P K+V S++ Q T AG +P D Sbjct: 185 IYRAAYFGVYDTAKGMLPDPKNVHIIVSWMIAQ---TVTAVAGLVSYPFD 231 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 63,337,495 Number of Sequences: 219361 Number of extensions: 1248862 Number of successful extensions: 3221 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 3143 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3219 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2968155324 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)