ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd22h22 |
|---|---|
| Clone Library Name | barley_pub |
>3HIDH_ARATH (Q9SUC0) Probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial| precursor (EC 1.1.1.31) (HIBADH) Length = 347 Score = 222 bits (566), Expect = 6e-58 Identities = 105/140 (75%), Positives = 120/140 (85%) Frame = -1 Query: 645 IYCGGAGNGSAAKICNNMAMAISMLGVSEAFALGQNLGIKASTLTDIFNCSSARCWSSDT 466 IYCGG+GNGSAAKICNN+AMA+SMLG SEA ALGQ+LGI ASTLT++ N SS RCWSSD Sbjct: 207 IYCGGSGNGSAAKICNNLAMAVSMLGTSEALALGQSLGISASTLTEVLNTSSGRCWSSDA 266 Query: 465 YNPVPGVMAGVPSARNYDGGFTSKLMAKDLDLAMASASGVGFKCPMGSEALEIYRKLCDE 286 YNPVPGVM GVPS+R+Y+GGF SKLMAKDL+LA ASA VG K P+ S+A EIY+K+C+E Sbjct: 267 YNPVPGVMKGVPSSRDYNGGFASKLMAKDLNLAAASAEEVGHKSPLISKAQEIYKKMCEE 326 Query: 285 GCEFKDFSCAFRHFYTGKDE 226 G E KDFSC FRHFY GKDE Sbjct: 327 GHETKDFSCVFRHFYNGKDE 346
>3HIDH_HUMAN (P31937) 3-hydroxyisobutyrate dehydrogenase, mitochondrial| precursor (EC 1.1.1.31) (HIBADH) Length = 336 Score = 155 bits (391), Expect = 1e-37 Identities = 77/133 (57%), Positives = 90/133 (67%) Frame = -1 Query: 648 LIYCGGAGNGSAAKICNNMAMAISMLGVSEAFALGQNLGIKASTLTDIFNCSSARCWSSD 469 ++YCG G G AAKICNNM +AISM+G +EA LG LG+ L I N SS RCWSSD Sbjct: 196 VVYCGAVGTGQAAKICNNMLLAISMIGTAEAMNLGIRLGLDPKLLAKILNMSSGRCWSSD 255 Query: 468 TYNPVPGVMAGVPSARNYDGGFTSKLMAKDLDLAMASASGVGFKCPMGSEALEIYRKLCD 289 TYNPVPGVM GVPSA NY GGF + LMAKDL LA SA+ +GS A +IYR +C Sbjct: 256 TYNPVPGVMDGVPSANNYQGGFGTTLMAKDLGLAQDSATSTKSPILLGSLAHQIYRMMCA 315 Query: 288 EGCEFKDFSCAFR 250 +G KDFS F+ Sbjct: 316 KGYSKKDFSSVFQ 328
>3HIDH_RAT (P29266) 3-hydroxyisobutyrate dehydrogenase, mitochondrial| precursor (EC 1.1.1.31) (HIBADH) Length = 335 Score = 152 bits (384), Expect = 8e-37 Identities = 74/134 (55%), Positives = 91/134 (67%) Frame = -1 Query: 648 LIYCGGAGNGSAAKICNNMAMAISMLGVSEAFALGQNLGIKASTLTDIFNCSSARCWSSD 469 ++YCG G+G +AKICNNM +AISM+G +EA LG G+ L I N SS RCWSSD Sbjct: 195 VLYCGAVGSGQSAKICNNMLLAISMIGTAEAMNLGIRSGLDPKLLAKILNMSSGRCWSSD 254 Query: 468 TYNPVPGVMAGVPSARNYDGGFTSKLMAKDLDLAMASASGVGFKCPMGSEALEIYRKLCD 289 TYNPVPGVM GVPS+ NY GGF + LMAKDL LA SA+ +GS A +IYR +C Sbjct: 255 TYNPVPGVMDGVPSSNNYQGGFGTTLMAKDLGLAQDSATSTKTPILLGSVAHQIYRMMCS 314 Query: 288 EGCEFKDFSCAFRH 247 +G KDFS F++ Sbjct: 315 KGYSKKDFSSVFQY 328
>3HIDH_MOUSE (Q99L13) 3-hydroxyisobutyrate dehydrogenase, mitochondrial| precursor (EC 1.1.1.31) (HIBADH) Length = 335 Score = 152 bits (383), Expect = 1e-36 Identities = 74/134 (55%), Positives = 90/134 (67%) Frame = -1 Query: 648 LIYCGGAGNGSAAKICNNMAMAISMLGVSEAFALGQNLGIKASTLTDIFNCSSARCWSSD 469 ++YCG G G +AKICNNM +AISM+G +EA LG G+ L I N SS RCWSSD Sbjct: 195 VVYCGAVGTGQSAKICNNMLLAISMIGTAEAMNLGIRSGLDPKLLAKILNMSSGRCWSSD 254 Query: 468 TYNPVPGVMAGVPSARNYDGGFTSKLMAKDLDLAMASASGVGFKCPMGSEALEIYRKLCD 289 TYNPVPGVM GVPS+ NY GGF + LMAKDL LA SA+ +GS A +IYR +C Sbjct: 255 TYNPVPGVMHGVPSSNNYQGGFGTTLMAKDLGLAQDSATSTKTPILLGSLAHQIYRMMCS 314 Query: 288 EGCEFKDFSCAFRH 247 +G KDFS F++ Sbjct: 315 KGYSKKDFSSVFQY 328
>3HIDH_DROME (Q9V8M5) Probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial| precursor (EC 1.1.1.31) (HIBADH) Length = 324 Score = 134 bits (337), Expect = 2e-31 Identities = 64/132 (48%), Positives = 86/132 (65%) Frame = -1 Query: 648 LIYCGGAGNGSAAKICNNMAMAISMLGVSEAFALGQNLGIKASTLTDIFNCSSARCWSSD 469 + +CG G G AAK+CNNM +AISM+GVSEA L G+ A+ +I N S+ RCW+S+ Sbjct: 183 ITHCGVYGMGQAAKLCNNMMLAISMIGVSEAMNLAVRQGLDANVFAEIINSSTGRCWASE 242 Query: 468 TYNPVPGVMAGVPSARNYDGGFTSKLMAKDLDLAMASASGVGFKCPMGSEALEIYRKLCD 289 YNPVPGV P+ R+Y GGF+S L+ KDL LA A+ P+GS A ++Y+ LCD Sbjct: 243 IYNPVPGVCPSAPANRDYAGGFSSALITKDLGLASGVANASNSPIPLGSLAHKVYQSLCD 302 Query: 288 EGCEFKDFSCAF 253 +G KDFS + Sbjct: 303 KGLGNKDFSVVY 314
>3HIDH_CAEEL (Q9XTI0) Probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial| (EC 1.1.1.31) (HIBADH) Length = 299 Score = 132 bits (333), Expect = 7e-31 Identities = 67/134 (50%), Positives = 86/134 (64%), Gaps = 1/134 (0%) Frame = -1 Query: 648 LIYCGGAGNGSAAKICNNMAMAISMLGVSEAFALGQNLGIKASTLTDIFNCSSARCWSSD 469 ++ G GNG+AAKICNNM + I M+ V+E LG ++G+ A L I N SS RCWSSD Sbjct: 159 IVNLGAVGNGTAAKICNNMLLGIQMVAVAETMNLGISMGLDAKALAGIVNTSSGRCWSSD 218 Query: 468 TYNPVPGVMAGVPSARNYDGGFTSKLMAKDLDLAMASASGVGFKCPMGSEALEIYRKLC- 292 TYNPVPGV+ +PS R Y GGF + LMAKDL LA +++ PMGS A +IYR L Sbjct: 219 TYNPVPGVIENIPSCRGYAGGFGTTLMAKDLSLAQNASTNTQAPTPMGSLAHQIYRILAR 278 Query: 291 DEGCEFKDFSCAFR 250 D + KDF ++ Sbjct: 279 DPQYQAKDFGVVYQ 292
>MMSB_MYCTU (P63935) Probable 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31)| (HIBADH) Length = 294 Score = 111 bits (278), Expect = 2e-24 Identities = 52/129 (40%), Positives = 79/129 (61%) Frame = -1 Query: 648 LIYCGGAGNGSAAKICNNMAMAISMLGVSEAFALGQNLGIKASTLTDIFNCSSARCWSSD 469 +I+CG AG G AAK+CNNM +A+ + ++EAF L + LG+ A +L D+ ++ CW+ Sbjct: 155 IIHCGAAGAGQAAKVCNNMVLAVQQIAIAEAFVLAEKLGLSAQSLFDVITGATGNCWAVH 214 Query: 468 TYNPVPGVMAGVPSARNYDGGFTSKLMAKDLDLAMASASGVGFKCPMGSEALEIYRKLCD 289 T PVPG + P+ ++ GF++ LM KDL LAM + + G P+GS A +IY K Sbjct: 215 TNCPVPGPVPTSPANNDFKPGFSTALMNKDLGLAMDAVAATGATAPLGSHAADIYAKFAA 274 Query: 288 EGCEFKDFS 262 + + DFS Sbjct: 275 DHADL-DFS 282
>MMSB_MYCBO (P63936) Probable 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31)| (HIBADH) Length = 294 Score = 111 bits (278), Expect = 2e-24 Identities = 52/129 (40%), Positives = 79/129 (61%) Frame = -1 Query: 648 LIYCGGAGNGSAAKICNNMAMAISMLGVSEAFALGQNLGIKASTLTDIFNCSSARCWSSD 469 +I+CG AG G AAK+CNNM +A+ + ++EAF L + LG+ A +L D+ ++ CW+ Sbjct: 155 IIHCGAAGAGQAAKVCNNMVLAVQQIAIAEAFVLAEKLGLSAQSLFDVITGATGNCWAVH 214 Query: 468 TYNPVPGVMAGVPSARNYDGGFTSKLMAKDLDLAMASASGVGFKCPMGSEALEIYRKLCD 289 T PVPG + P+ ++ GF++ LM KDL LAM + + G P+GS A +IY K Sbjct: 215 TNCPVPGPVPTSPANNDFKPGFSTALMNKDLGLAMDAVAATGATAPLGSHAADIYAKFAA 274 Query: 288 EGCEFKDFS 262 + + DFS Sbjct: 275 DHADL-DFS 282
>MMSB_PSEAE (P28811) 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) (HIBADH)| Length = 298 Score = 102 bits (253), Expect = 1e-21 Identities = 57/142 (40%), Positives = 79/142 (55%), Gaps = 2/142 (1%) Frame = -1 Query: 648 LIYCGGAGNGSAAKICNNMAMAISMLGVSEAFALGQNLGIKASTLTDIFNCSSARCWSSD 469 + + G G G AKICNNM + I M G +EA ALG G+ + L+++ SS W+ + Sbjct: 158 IFHAGDHGAGQVAKICNNMLLGILMAGTAEALALGVKNGLDPAVLSEVMKQSSGGNWALN 217 Query: 468 TYNPVPGVMAGVPSARNYDGGFTSKLMAKDLDLAMASASGVGFKCPMGSEALEIY--RKL 295 YNP PGVM P++ Y GGF +LM KDL LA+A+A V P+G+ A ++ Sbjct: 218 LYNPWPGVMPQAPASNGYAGGFQVRLMNKDLGLALANAQAVQASTPLGALARNLFSLHAQ 277 Query: 294 CDEGCEFKDFSCAFRHFYTGKD 229 D E DFS + + Y GKD Sbjct: 278 ADAEHEGLDFS-SIQKLYRGKD 298
>YKWC_BACSU (O34948) Hypothetical oxidoreductase ykwC (EC 1.1.-.-)| Length = 288 Score = 65.9 bits (159), Expect = 1e-10 Identities = 41/122 (33%), Positives = 62/122 (50%) Frame = -1 Query: 642 YCGGAGNGSAAKICNNMAMAISMLGVSEAFALGQNLGIKASTLTDIFNCSSARCWSSDTY 463 Y G AG+G K+CN +A+A M+GV+EA A Q G++ + +A WS Sbjct: 161 YQGPAGSGQHTKMCNQIAIAAGMIGVAEAMAYAQKSGLEPENVLKSITTGAAGSWSLS-- 218 Query: 462 NPVPGVMAGVPSARNYDGGFTSKLMAKDLDLAMASASGVGFKCPMGSEALEIYRKLCDEG 283 N P ++ G N++ GF K KD+ +A+ A +G + P S A +Y KL +G Sbjct: 219 NLAPRMLQG-----NFEPGFYVKHFIKDMGIALEEAELMGEEMPGLSLAKSLYDKLAAQG 273 Query: 282 CE 277 E Sbjct: 274 EE 275
>Y229_SYNY3 (Q55702) Hypothetical oxidoreductase slr0229 (EC 1.1.-.-)| Length = 290 Score = 50.1 bits (118), Expect = 6e-06 Identities = 28/98 (28%), Positives = 46/98 (46%) Frame = -1 Query: 648 LIYCGGAGNGSAAKICNNMAMAISMLGVSEAFALGQNLGIKASTLTDIFNCSSARCWSSD 469 +++CG +G+G A K+CN + I + +EA L + LGI + D +A W+ Sbjct: 162 IVHCGPSGSGQAVKLCNQVLCGIHAIAAAEAIQLSEQLGIAPELVIDTCGSGAAGSWALT 221 Query: 468 TYNPVPGVMAGVPSARNYDGGFTSKLMAKDLDLAMASA 355 +A S ++ GF K + KDL L +A Sbjct: 222 N-------LAPKMSEADFAPGFMVKHLLKDLRLVREAA 252
>GARR_ECOLI (P0ABQ2) 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)| (Tartronate semialdehyde reductase) (TSAR) Length = 294 Score = 47.8 bits (112), Expect = 3e-05 Identities = 34/129 (26%), Positives = 59/129 (45%) Frame = -1 Query: 648 LIYCGGAGNGSAAKICNNMAMAISMLGVSEAFALGQNLGIKASTLTDIFNCSSARCWSSD 469 +++ G G G+ K+ N + +A+++ +SEA L G+ + A D Sbjct: 157 VVHTGEIGAGNVTKLANQVIVALNIAAMSEALTLATKAGVNPDLVYQAIRGGLAGSTVLD 216 Query: 468 TYNPVPGVMAGVPSARNYDGGFTSKLMAKDLDLAMASASGVGFKCPMGSEALEIYRKLCD 289 P+ VM RN+ GF L KDL A+ ++ GVG + P+ + +E+ + L Sbjct: 217 AKAPM--VMD-----RNFKPGFRIDLHIKDLANALDTSHGVGAQLPLTAAVMEMMQALRA 269 Query: 288 EGCEFKDFS 262 +G D S Sbjct: 270 DGLGTADHS 278
>GARR_ECOL6 (P0ABQ3) 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)| (Tartronate semialdehyde reductase) (TSAR) Length = 294 Score = 47.8 bits (112), Expect = 3e-05 Identities = 34/129 (26%), Positives = 59/129 (45%) Frame = -1 Query: 648 LIYCGGAGNGSAAKICNNMAMAISMLGVSEAFALGQNLGIKASTLTDIFNCSSARCWSSD 469 +++ G G G+ K+ N + +A+++ +SEA L G+ + A D Sbjct: 157 VVHTGEIGAGNVTKLANQVIVALNIAAMSEALTLATKAGVNPDLVYQAIRGGLAGSTVLD 216 Query: 468 TYNPVPGVMAGVPSARNYDGGFTSKLMAKDLDLAMASASGVGFKCPMGSEALEIYRKLCD 289 P+ VM RN+ GF L KDL A+ ++ GVG + P+ + +E+ + L Sbjct: 217 AKAPM--VMD-----RNFKPGFRIDLHIKDLANALDTSHGVGAQLPLTAAVMEMMQALRA 269 Query: 288 EGCEFKDFS 262 +G D S Sbjct: 270 DGLGTADHS 278
>GLXR_ECOLI (P77161) 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)| (Tartronate semialdehyde reductase) (TSAR) Length = 292 Score = 38.5 bits (88), Expect = 0.017 Identities = 32/137 (23%), Positives = 50/137 (36%), Gaps = 12/137 (8%) Frame = -1 Query: 636 GGAGNGSAAKICNNMAMAISMLGVSEAFALGQNLGIKASTLTDIFNCSSARCWSSDTYNP 457 GG G+G K+ N + +A+++ VSEA G +D Sbjct: 160 GGNGDGQTCKVANQIIVALNIEAVSEALLFASKAG-------------------ADPVRV 200 Query: 456 VPGVMAGVPSA------------RNYDGGFTSKLMAKDLDLAMASASGVGFKCPMGSEAL 313 +M G S+ R ++ GF L KDL+LA+ SA + P + Sbjct: 201 RQALMGGFASSRILEVHGERMIKRTFNPGFKIALHQKDLNLALQSAKALALNLPNTATCQ 260 Query: 312 EIYRKLCDEGCEFKDFS 262 E++ G D S Sbjct: 261 ELFNTCAANGGSQLDHS 277
>YCY3_SHEFR (O33730) Hypothetical oxidoreductase in cytochrome c3 5'region| (Fragment) Length = 194 Score = 37.7 bits (86), Expect = 0.030 Identities = 26/114 (22%), Positives = 49/114 (42%) Frame = -1 Query: 636 GGAGNGSAAKICNNMAMAISMLGVSEAFALGQNLGIKASTLTDIFNCSSARCWSSDTYNP 457 G G G K+ N + +A + G++E ++ G+ + ++ + A+ W + N Sbjct: 66 GPVGAGQLTKMVNQICIAGVVQGLAEGLHFAKSAGLDGLKVIEVISKGRAQSWQME--NR 123 Query: 456 VPGVMAGVPSARNYDGGFTSKLMAKDLDLAMASASGVGFKCPMGSEALEIYRKL 295 + G YD GF M KDL +A+ A G P+ + + Y ++ Sbjct: 124 YKTMWQG-----QYDFGFAIDWMRKDLGIALDEARRNGSHLPVAALVDQFYSEV 172
>YIHU_SALTY (Q9L7S0) Hypothetical oxidoreductase yihU (EC 1.1.-.-)| Length = 298 Score = 35.8 bits (81), Expect = 0.11 Identities = 36/130 (27%), Positives = 60/130 (46%), Gaps = 1/130 (0%) Frame = -1 Query: 648 LIYCGGAGNGSAAKICNN-MAMAISMLGVSEAFALGQNLGIKASTLTDIFNCSSARCWSS 472 L+ GG G G K+ NN M++A++ L +EA L + LG+ + + ++A Sbjct: 158 LVNTGGPGMGIRVKLINNYMSIALNALS-AEAAVLCEALGLSFDVALKVMSGTAAGKGHF 216 Query: 471 DTYNPVPGVMAGVPSARNYDGGFTSKLMAKDLDLAMASASGVGFKCPMGSEALEIYRKLC 292 T P VM G + F L KDL +A+ A+ + P+G+ + E+Y Sbjct: 217 TTTWPNK-VMKG-----DLSPAFMIDLAHKDLGIALDVANQLHVPMPLGAASREVYNLAR 270 Query: 291 DEGCEFKDFS 262 G +D+S Sbjct: 271 AAGRGREDWS 280
>YIHU_SHIFL (P0A9V9) Hypothetical oxidoreductase yihU (EC 1.1.-.-)| Length = 298 Score = 34.7 bits (78), Expect = 0.25 Identities = 35/130 (26%), Positives = 61/130 (46%), Gaps = 1/130 (0%) Frame = -1 Query: 648 LIYCGGAGNGSAAKICNN-MAMAISMLGVSEAFALGQNLGIKASTLTDIFNCSSARCWSS 472 LI GG G G K+ NN M++A++ L +EA L + L + + + ++A Sbjct: 158 LINAGGPGMGIRVKLINNYMSIALNALS-AEAAVLCEALNLPFDVAVKVMSGTAAGKGHF 216 Query: 471 DTYNPVPGVMAGVPSARNYDGGFTSKLMAKDLDLAMASASGVGFKCPMGSEALEIYRKLC 292 T P V++G + F L KDL +A+ A+ + P+G+ + E+Y + Sbjct: 217 TTSWPNK-VLSG-----DLSPAFMIDLAHKDLGIALDVANQLHVPMPLGAASREVYSQAR 270 Query: 291 DEGCEFKDFS 262 G +D+S Sbjct: 271 AAGRGRQDWS 280
>YIHU_ECOLI (P0A9V8) Hypothetical oxidoreductase yihU (EC 1.1.-.-)| Length = 298 Score = 34.7 bits (78), Expect = 0.25 Identities = 35/130 (26%), Positives = 61/130 (46%), Gaps = 1/130 (0%) Frame = -1 Query: 648 LIYCGGAGNGSAAKICNN-MAMAISMLGVSEAFALGQNLGIKASTLTDIFNCSSARCWSS 472 LI GG G G K+ NN M++A++ L +EA L + L + + + ++A Sbjct: 158 LINAGGPGMGIRVKLINNYMSIALNALS-AEAAVLCEALNLPFDVAVKVMSGTAAGKGHF 216 Query: 471 DTYNPVPGVMAGVPSARNYDGGFTSKLMAKDLDLAMASASGVGFKCPMGSEALEIYRKLC 292 T P V++G + F L KDL +A+ A+ + P+G+ + E+Y + Sbjct: 217 TTSWPNK-VLSG-----DLSPAFMIDLAHKDLGIALDVANQLHVPMPLGAASREVYSQAR 270 Query: 291 DEGCEFKDFS 262 G +D+S Sbjct: 271 AAGRGRQDWS 280
>YFJR_BACSU (O34969) Hypothetical oxidoreductase yfjR (EC 1.1.-.-)| Length = 261 Score = 34.7 bits (78), Expect = 0.25 Identities = 27/112 (24%), Positives = 49/112 (43%) Frame = -1 Query: 618 SAAKICNNMAMAISMLGVSEAFALGQNLGIKASTLTDIFNCSSARCWSSDTYNPVPGVMA 439 +AAKI N + + +SE+F + + G++ +I ++ + S Y +MA Sbjct: 143 NAAKISINFLLVSMLEALSESFLMMEKYGLEQKQFLEI----ASALFGSPVYQNYGTIMA 198 Query: 438 GVPSARNYDGGFTSKLMAKDLDLAMASASGVGFKCPMGSEALEIYRKLCDEG 283 + GF L KD +LA+A+A V P+ A + ++G Sbjct: 199 ---EQKFEPAGFKMSLGLKDTNLALAAAKRVSANLPLAELAKSHFESGIEKG 247
>PCF11_HUMAN (O94913) Pre-mRNA cleavage complex 2 protein Pcf11 (Pre-mRNA| cleavage complex II protein Pcf11) (Fragment) Length = 1654 Score = 31.6 bits (70), Expect = 2.1 Identities = 23/72 (31%), Positives = 34/72 (47%) Frame = +3 Query: 78 QRDADRYLDLFSKTLSGHCSTNT*IQSIGEHYCFISTSVEFAGIATGITSHPCRCRSGET 257 ++D D ++ L+G S N I I + I+ E G G +S R RS Sbjct: 527 KKDKDEHMKSSEHRLAG--SRNKIINGIVQKQDTITEESEKQGTKPGRSSTRKRSRSRSP 584 Query: 258 RMRNP*IHSPRR 293 + R+P IHSP+R Sbjct: 585 KSRSPIIHSPKR 596
>BGLS_HANAN (P06835) Beta-glucosidase precursor (EC 3.2.1.21) (Gentiobiase)| (Cellobiase) (Beta-D-glucoside glucohydrolase) Length = 825 Score = 31.2 bits (69), Expect = 2.8 Identities = 17/56 (30%), Positives = 29/56 (51%) Frame = -1 Query: 627 GNGSAAKICNNMAMAISMLGVSEAFALGQNLGIKASTLTDIFNCSSARCWSSDTYN 460 G GSA+ C+ ++ L +S L ++A+ LTD+F C A +S ++N Sbjct: 78 GVGSASGPCSGNTGSVPRLNISSICVQDGPLSVRAADLTDVFPCGMA---ASSSFN 130
>DEF_MYCLE (Q9CBI2) Peptide deformylase (EC 3.5.1.88) (PDF) (Polypeptide| deformylase) Length = 197 Score = 30.8 bits (68), Expect = 3.6 Identities = 12/20 (60%), Positives = 14/20 (70%) Frame = +2 Query: 425 ADGTPAITPGTGLYVSLLQH 484 ADG P T GTGL+ +LQH Sbjct: 129 ADGNPVTTEGTGLFARMLQH 148
>PPZ2_YEAST (P33329) Serine/threonine-protein phosphatase PP-Z2 (EC 3.1.3.16)| Length = 709 Score = 30.0 bits (66), Expect = 6.2 Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 3/37 (8%) Frame = -2 Query: 251 ATSTPARMRSD---PCSYPSKLNTGRNKTIMFSNRLN 150 +TS+ R RSD P SYP G N + FSNR N Sbjct: 214 STSSKLRRRSDNTLPASYPLNAEAGGNGSDYFSNRSN 250
>QUEA_PASMU (P57832) S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC| 5.-.-.-) (Queuosine biosynthesis protein queA) Length = 363 Score = 29.6 bits (65), Expect = 8.0 Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 11/70 (15%) Frame = -1 Query: 465 YNPVPGVMAGVPSARNYDGGFTSKLMAKDLDLAMASAS-GVGFKCP----------MGSE 319 YN VPG +A + ++D ++L AK ++ A + G G P M +E Sbjct: 175 YNKVPGAVAAPTAGLHFDDALLAQLKAKGVNFAFVTLHVGAGTFQPVRVEQIEDHKMHAE 234 Query: 318 ALEIYRKLCD 289 +E+ +++CD Sbjct: 235 YVEVPQEVCD 244 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 93,698,766 Number of Sequences: 219361 Number of extensions: 1952754 Number of successful extensions: 5003 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 4850 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5003 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6086476506 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
