ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd22h13
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PSAL_HORVU (P23993) Photosystem I reaction center subunit XI, ch... 296 2e-80
2PSAL_CUCSA (Q39654) Photosystem I reaction center subunit XI, ch... 247 2e-65
3PSAL_SPIOL (Q41385) Photosystem I reaction center subunit XI, ch... 239 3e-63
4PSAL_ARATH (Q9SUI4) Photosystem I reaction center subunit XI, ch... 239 3e-63
5PSAL_CYACA (Q9TM17) Photosystem I reaction center subunit XI (PS... 135 5e-32
6PSAL_GRATL (Q6B8P4) Photosystem I reaction center subunit XI (PS... 135 9e-32
7PSAL_PORPU (P51222) Photosystem I reaction center subunit XI (PS... 134 2e-31
8PSAL_GUITH (O78469) Photosystem I reaction center subunit XI (PS... 134 2e-31
9PSAL_SYNEL (Q8DGB4) Photosystem I reaction center subunit XI (PS... 130 3e-30
10PSAL_CYAME (Q85FP8) Photosystem I reaction center subunit XI (PS... 127 1e-29
11PSAL_SYNEN (P25902) Photosystem I reaction center subunit XI (PS... 127 2e-29
12PSAL_SYNY3 (P37277) Photosystem I reaction center subunit XI (PS... 127 2e-29
13PSAL_ANASP (P58577) Photosystem I reaction center subunit XI (PS... 125 7e-29
14PSAL_ANAVT (P31092) Photosystem I reaction center subunit XI (PS... 124 1e-28
15PSAL_MASLA (O31126) Photosystem I reaction center subunit XI (PS... 124 2e-28
16PSAL_ISOGA (Q5ENP6) Photosystem I reaction center subunit XI (PS... 124 2e-28
17PSAL_ODOSI (P49486) Photosystem I reaction center subunit XI (PS... 122 8e-28
18PSAL_SYNP7 (P95822) Photosystem I reaction center subunit XI (PS... 119 5e-27
19PSAL_SYNP2 (Q54753) Photosystem I reaction center subunit XI (PS... 118 9e-27
20PSAL_SYNP6 (P31084) Photosystem I reaction center subunit XI (PS... 115 7e-26
21PSAL_PROMA (O87787) Photosystem I reaction center subunit XI (PS... 102 6e-22
22PSAL_GLOVI (Q7NIE7) Photosystem I reaction center subunit XI (PS... 96 8e-20
23ICP0_BHV1J (P29128) Trans-acting transcriptional protein ICP0 (P... 30 5.3
24ETS3_DROME (P29774) DNA-binding protein D-ETS-3 30 5.3
25CBP_HUMAN (Q92793) CREB-binding protein (EC 2.3.1.48) 29 9.1
26HRDB_STRCO (P18183) RNA polymerase principal sigma factor hrdB 29 9.1
27LRIG1_HUMAN (Q96JA1) Leucine-rich repeats and immunoglobulin-lik... 29 9.1

>PSAL_HORVU (P23993) Photosystem I reaction center subunit XI, chloroplast|
           precursor (PSI-L) (PSI subunit V)
          Length = 209

 Score =  296 bits (758), Expect = 2e-80
 Identities = 148/156 (94%), Positives = 148/156 (94%)
 Frame = -3

Query: 526 PINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFALTG 347
           PINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFALTG
Sbjct: 54  PINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFALTG 113

Query: 346 PLRNTPVHGQAGTLGAIGLVSILSVCLTMYGVASFNEGEPSTAPVLTLTGRKKEADKLQT 167
           PLRNTPVHGQAGTLGAIGLVSILSVCLTMYGVASFNEGEPSTAPVLTLTGRKKEADKLQT
Sbjct: 114 PLRNTPVHGQAGTLGAIGLVSILSVCLTMYGVASFNEGEPSTAPVLTLTGRKKEADKLQT 173

Query: 166 AEGWSQXXXXXXXXGVSGAVWAYFLLYVLDLPYFFK 59
           AEGWSQ        GVSGAVWAYFLLYVLDLPYFFK
Sbjct: 174 AEGWSQFTGGFFFGGVSGAVWAYFLLYVLDLPYFFK 209



to top

>PSAL_CUCSA (Q39654) Photosystem I reaction center subunit XI, chloroplast|
           precursor (PSI-L) (PSI subunit V)
          Length = 217

 Score =  247 bits (630), Expect = 2e-65
 Identities = 121/156 (77%), Positives = 131/156 (83%)
 Frame = -3

Query: 526 PINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFALTG 347
           PINGDPFIGSLETPVTSSPL+AWYLSNLPAYRTAVSPLLRGIEVGLAHG+ LVGPF   G
Sbjct: 62  PINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKAG 121

Query: 346 PLRNTPVHGQAGTLGAIGLVSILSVCLTMYGVASFNEGEPSTAPVLTLTGRKKEADKLQT 167
           PLRNT   G AG+L A GL+ ILSVCLTMYGVASFNEGEPSTAP LTLTGRKK  D LQT
Sbjct: 122 PLRNTAYAGGAGSLAAGGLIVILSVCLTMYGVASFNEGEPSTAPSLTLTGRKKTPDPLQT 181

Query: 166 AEGWSQXXXXXXXXGVSGAVWAYFLLYVLDLPYFFK 59
           A+GW++        G+SG +WAYFLLYVLDLPY+ K
Sbjct: 182 ADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK 217



to top

>PSAL_SPIOL (Q41385) Photosystem I reaction center subunit XI, chloroplast|
           precursor (PSI-L) (PSI subunit V)
          Length = 216

 Score =  239 bits (610), Expect = 3e-63
 Identities = 114/156 (73%), Positives = 130/156 (83%)
 Frame = -3

Query: 526 PINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFALTG 347
           P+NGDPFIG LETPVTSSPL+AWYLSNLPAYRTAV+PLLRG+EVGLAHG+LLVGPF   G
Sbjct: 61  PLNGDPFIGGLETPVTSSPLIAWYLSNLPAYRTAVNPLLRGVEVGLAHGFLLVGPFVKAG 120

Query: 346 PLRNTPVHGQAGTLGAIGLVSILSVCLTMYGVASFNEGEPSTAPVLTLTGRKKEADKLQT 167
           PLRNT   G AG+L A GLV ILS+CLTMYG+ASF EGEPS AP LTLTGRKK+ D+LQ+
Sbjct: 121 PLRNTEYAGAAGSLAAAGLVVILSMCLTMYGIASFKEGEPSIAPALTLTGRKKQPDQLQS 180

Query: 166 AEGWSQXXXXXXXXGVSGAVWAYFLLYVLDLPYFFK 59
           A+GW++        GVSG  WA FL+YVLDLPY+FK
Sbjct: 181 ADGWAKFTGGFFFGGVSGVTWACFLMYVLDLPYYFK 216



to top

>PSAL_ARATH (Q9SUI4) Photosystem I reaction center subunit XI, chloroplast|
           precursor (PSI-L) (PSI subunit V)
          Length = 219

 Score =  239 bits (610), Expect = 3e-63
 Identities = 114/156 (73%), Positives = 129/156 (82%)
 Frame = -3

Query: 526 PINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFALTG 347
           PINGDPFIGSLETPVTSSPL+AWYLSNLP YRTAV+PLLRG+EVGLAHG+ LVGPF   G
Sbjct: 64  PINGDPFIGSLETPVTSSPLIAWYLSNLPGYRTAVNPLLRGVEVGLAHGFFLVGPFVKAG 123

Query: 346 PLRNTPVHGQAGTLGAIGLVSILSVCLTMYGVASFNEGEPSTAPVLTLTGRKKEADKLQT 167
           PLRNT   G AG+L A GLV ILS+CLT+YG++SF EGEPS AP LTLTGRKK+ D+LQT
Sbjct: 124 PLRNTAYAGSAGSLAAAGLVVILSMCLTIYGISSFKEGEPSIAPSLTLTGRKKQPDQLQT 183

Query: 166 AEGWSQXXXXXXXXGVSGAVWAYFLLYVLDLPYFFK 59
           A+GW++        G+SG  WAYFLLYVLDLPYF K
Sbjct: 184 ADGWAKFTGGFFFGGISGVTWAYFLLYVLDLPYFVK 219



to top

>PSAL_CYACA (Q9TM17) Photosystem I reaction center subunit XI (PSI-L) (PSI|
           subunit V)
          Length = 152

 Score =  135 bits (341), Expect = 5e-32
 Identities = 66/146 (45%), Positives = 88/146 (60%)
 Frame = -3

Query: 526 PINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFALTG 347
           P   +PF+G+L TPV SS +  WYL NLP YR  +SPLLRG+E+G+AHGY ++GPF   G
Sbjct: 7   PYGSNPFVGNLSTPVNSSKVTIWYLKNLPIYRRGLSPLLRGLEIGMAHGYFIIGPFYKLG 66

Query: 346 PLRNTPVHGQAGTLGAIGLVSILSVCLTMYGVASFNEGEPSTAPVLTLTGRKKEADKLQT 167
           PLRNT +   +G + AIGL+ I S+ + +YG+ +F+  E +              DKLQT
Sbjct: 67  PLRNTDLSLLSGLIAAIGLIIISSIAMIIYGIVTFDNSENN--------------DKLQT 112

Query: 166 AEGWSQXXXXXXXXGVSGAVWAYFLL 89
           A GW Q         V GA +AY LL
Sbjct: 113 ANGWRQLASGFLLGAVGGAGFAYILL 138



to top

>PSAL_GRATL (Q6B8P4) Photosystem I reaction center subunit XI (PSI-L) (PSI|
           subunit V)
          Length = 150

 Score =  135 bits (339), Expect = 9e-32
 Identities = 70/144 (48%), Positives = 89/144 (61%)
 Frame = -3

Query: 520 NGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFALTGPL 341
           N DPF+G+L TPV++S      L+NLPAYR  +SPLLRG+E+G+AHGY LVGPF   GPL
Sbjct: 9   NNDPFLGNLSTPVSTSTFTKGLLNNLPAYRRGLSPLLRGLEIGMAHGYFLVGPFDKLGPL 68

Query: 340 RNTPVHGQAGTLGAIGLVSILSVCLTMYGVASFNEGEPSTAPVLTLTGRKKEADKLQTAE 161
           RNT V   +G L A+GL+ IL+VCL+MYG  SF++ +                D LQT E
Sbjct: 69  RNTDVALLSGFLSAVGLIIILTVCLSMYGNVSFDKDDAK--------------DLLQTTE 114

Query: 160 GWSQXXXXXXXXGVSGAVWAYFLL 89
           GW Q         V G+ +AY LL
Sbjct: 115 GWGQFTAGFLVGAVGGSGFAYLLL 138



to top

>PSAL_PORPU (P51222) Photosystem I reaction center subunit XI (PSI-L) (PSI|
           subunit V)
          Length = 153

 Score =  134 bits (337), Expect = 2e-31
 Identities = 70/146 (47%), Positives = 86/146 (58%)
 Frame = -3

Query: 526 PINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFALTG 347
           P N DPF+G+L TPV++S      L NLPAYR  +SPLLRG+E+G+AHGY L+GPF   G
Sbjct: 7   PYNDDPFVGNLSTPVSTSSFSKGLLGNLPAYRRGLSPLLRGLEIGMAHGYFLIGPFDKLG 66

Query: 346 PLRNTPVHGQAGTLGAIGLVSILSVCLTMYGVASFNEGEPSTAPVLTLTGRKKEADKLQT 167
           PLR T V   AG L ++GL+ IL+ CL+MYG  SF               R    D LQT
Sbjct: 67  PLRGTDVALLAGFLSSVGLIIILTTCLSMYGNVSFT--------------RSDSKDPLQT 112

Query: 166 AEGWSQXXXXXXXXGVSGAVWAYFLL 89
           AEGW Q         V G+ +AY LL
Sbjct: 113 AEGWGQFTAGFLVGAVGGSGFAYLLL 138



to top

>PSAL_GUITH (O78469) Photosystem I reaction center subunit XI (PSI-L) (PSI|
           subunit V)
          Length = 152

 Score =  134 bits (336), Expect = 2e-31
 Identities = 66/146 (45%), Positives = 88/146 (60%)
 Frame = -3

Query: 526 PINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFALTG 347
           P N DPF+G+L TP+T+S      LSNLPAYR  +SPLLRG+E+G+ HGY LVGPF   G
Sbjct: 7   PYNDDPFVGNLATPITTSSFTRTLLSNLPAYRAGLSPLLRGLEIGMTHGYFLVGPFYKLG 66

Query: 346 PLRNTPVHGQAGTLGAIGLVSILSVCLTMYGVASFNEGEPSTAPVLTLTGRKKEADKLQT 167
           PLRN+ V   AG   A+GL+ I++ CL +YGV SFN  +                ++LQ+
Sbjct: 67  PLRNSEVALLAGVFSALGLIIIMAACLAIYGVVSFNTND--------------GGEQLQS 112

Query: 166 AEGWSQXXXXXXXXGVSGAVWAYFLL 89
           A+GW Q         + GA +AY L+
Sbjct: 113 AKGWRQFTSGWLVGSIGGASFAYILI 138



to top

>PSAL_SYNEL (Q8DGB4) Photosystem I reaction center subunit XI (PSI-L) (PSI|
           subunit V)
          Length = 155

 Score =  130 bits (326), Expect = 3e-30
 Identities = 63/146 (43%), Positives = 87/146 (59%)
 Frame = -3

Query: 526 PINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFALTG 347
           P NGDPF+G L TP++ S LV  ++ NLPAYR  +SP+LRG+EVG+AHGY L+GP+   G
Sbjct: 8   PYNGDPFVGHLSTPISDSGLVKTFIGNLPAYRQGLSPILRGLEVGMAHGYFLIGPWVKLG 67

Query: 346 PLRNTPVHGQAGTLGAIGLVSILSVCLTMYGVASFNEGEPSTAPVLTLTGRKKEADKLQT 167
           PLR++ V    G +  I L+ + + CL  YG+ SF +G  S             +D L+T
Sbjct: 68  PLRDSDVANLGGLISGIALILVATACLAAYGLVSFQKGGSS-------------SDPLKT 114

Query: 166 AEGWSQXXXXXXXXGVSGAVWAYFLL 89
           +EGWSQ         +  A  A+FLL
Sbjct: 115 SEGWSQFTAGFFVGAMGSAFVAFFLL 140



to top

>PSAL_CYAME (Q85FP8) Photosystem I reaction center subunit XI (PSI-L) (PSI|
           subunit V)
          Length = 140

 Score =  127 bits (320), Expect = 1e-29
 Identities = 65/146 (44%), Positives = 83/146 (56%)
 Frame = -3

Query: 526 PINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFALTG 347
           P N DPF+G L TP+ SS L   YLS LP YR  VSP LRG+E+G+AHGY L+GPF   G
Sbjct: 7   PYNNDPFVGHLATPINSSSLTRAYLSQLPIYRRGVSPFLRGLEIGMAHGYFLIGPFVQLG 66

Query: 346 PLRNTPVHGQAGTLGAIGLVSILSVCLTMYGVASFNEGEPSTAPVLTLTGRKKEADKLQT 167
           PLRNT +   AG L AIGL+ IL++ + +YG  SF                  ++  L++
Sbjct: 67  PLRNTDIKYLAGLLSAIGLIVILTLGMLLYGAVSFT----------------NDSQDLES 110

Query: 166 AEGWSQXXXXXXXXGVSGAVWAYFLL 89
            +GW Q         V GA +AY LL
Sbjct: 111 VDGWRQLASGFLLGAVGGAGFAYLLL 136



to top

>PSAL_SYNEN (P25902) Photosystem I reaction center subunit XI (PSI-L) (PSI|
           subunit V)
          Length = 148

 Score =  127 bits (319), Expect = 2e-29
 Identities = 62/146 (42%), Positives = 86/146 (58%)
 Frame = -3

Query: 526 PINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFALTG 347
           P NGDPF+G L TP++ S LV  ++ NLPAYR  +SP+L G+EVG+AHGY L+GP+   G
Sbjct: 7   PYNGDPFVGHLSTPISDSGLVKTFIGNLPAYRQGLSPILPGLEVGMAHGYFLIGPWVKLG 66

Query: 346 PLRNTPVHGQAGTLGAIGLVSILSVCLTMYGVASFNEGEPSTAPVLTLTGRKKEADKLQT 167
           PLR++ V    G +  I L+ + + CL  YG+ SF +G  S             +D L+T
Sbjct: 67  PLRDSDVANLGGLISGIALILVATACLAAYGLVSFQKGGSS-------------SDPLKT 113

Query: 166 AEGWSQXXXXXXXXGVSGAVWAYFLL 89
           +EGWSQ         +  A  A+FLL
Sbjct: 114 SEGWSQFTAGFFVGAMGSAFVAFFLL 139



to top

>PSAL_SYNY3 (P37277) Photosystem I reaction center subunit XI (PSI-L) (PSI|
           subunit V)
          Length = 157

 Score =  127 bits (318), Expect = 2e-29
 Identities = 62/144 (43%), Positives = 86/144 (59%)
 Frame = -3

Query: 520 NGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFALTGPL 341
           NGDPF+G L TP++ S     ++ NLPAYR  +SP+LRG+EVG+AHGY L+GP+ L GPL
Sbjct: 12  NGDPFVGHLSTPISDSAFTRTFIGNLPAYRKGLSPILRGLEVGMAHGYFLIGPWTLLGPL 71

Query: 340 RNTPVHGQAGTLGAIGLVSILSVCLTMYGVASFNEGEPSTAPVLTLTGRKKEADKLQTAE 161
           R++      G +GA+ L+ + +  L+ YG+ +F              G +   D LQTA+
Sbjct: 72  RDSEYQYIGGLIGALALILVATAALSSYGLVTFQ-------------GEQGSGDTLQTAD 118

Query: 160 GWSQXXXXXXXXGVSGAVWAYFLL 89
           GWSQ        G+ GA  AYFLL
Sbjct: 119 GWSQFAAGFFVGGMGGAFVAYFLL 142



to top

>PSAL_ANASP (P58577) Photosystem I reaction center subunit XI (PSI-L) (PSI|
           subunit V)
          Length = 172

 Score =  125 bits (314), Expect = 7e-29
 Identities = 66/145 (45%), Positives = 87/145 (60%)
 Frame = -3

Query: 526 PINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFALTG 347
           P   DP  G+LETPV +SPLV W+++NLPAYR  ++P  RG+EVG+AHGY L GPFA  G
Sbjct: 23  PAGRDPQWGNLETPVNASPLVKWFINNLPAYRPGLTPFRRGLEVGMAHGYFLFGPFAKLG 82

Query: 346 PLRNTPVHGQAGTLGAIGLVSILSVCLTMYGVASFNEGEPSTAPVLTLTGRKKEADKLQT 167
           PLR+      AG LGAIGLV + ++ L++Y     N   P+    +T+       D  Q+
Sbjct: 83  PLRDAANANLAGLLGAIGLVVLFTLALSLYA----NSNPPTALASVTV---PNPPDAFQS 135

Query: 166 AEGWSQXXXXXXXXGVSGAVWAYFL 92
            EGW+         G+ GAV AYFL
Sbjct: 136 KEGWNNFASAFLIGGIGGAVVAYFL 160



to top

>PSAL_ANAVT (P31092) Photosystem I reaction center subunit XI (PSI-L) (PSI|
           subunit V)
          Length = 172

 Score =  124 bits (312), Expect = 1e-28
 Identities = 66/145 (45%), Positives = 86/145 (59%)
 Frame = -3

Query: 526 PINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFALTG 347
           P   DP  G+LETPV +SPLV W+++NLPAYR  ++P  RG+EVG+AHGY L GPFA  G
Sbjct: 23  PAGRDPQWGNLETPVNASPLVKWFINNLPAYRPGLTPFRRGLEVGMAHGYFLFGPFAKLG 82

Query: 346 PLRNTPVHGQAGTLGAIGLVSILSVCLTMYGVASFNEGEPSTAPVLTLTGRKKEADKLQT 167
           PLR+      AG LGAIGLV + ++ L++Y     N   P     +T+       D  Q+
Sbjct: 83  PLRDAANANLAGLLGAIGLVVLFTLSLSLYA----NSNPPKALASVTV---PNPPDAFQS 135

Query: 166 AEGWSQXXXXXXXXGVSGAVWAYFL 92
            EGW+         G+ GAV AYFL
Sbjct: 136 KEGWNNFASAFLIGGIGGAVVAYFL 160



to top

>PSAL_MASLA (O31126) Photosystem I reaction center subunit XI (PSI-L) (PSI|
           subunit V)
          Length = 173

 Score =  124 bits (311), Expect = 2e-28
 Identities = 69/151 (45%), Positives = 87/151 (57%)
 Frame = -3

Query: 526 PINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFALTG 347
           P   DP IG LETP+ SSPLV W++ NLPAYR  ++   RG+EVG+AHGY + GPFA  G
Sbjct: 23  PAYRDPQIGDLETPINSSPLVKWFIGNLPAYRPGITTFRRGLEVGMAHGYWIFGPFAKLG 82

Query: 346 PLRNTPVHGQAGTLGAIGLVSILSVCLTMYGVASFNEGEPSTAPVLTLTGRKKEADKLQT 167
           PLRNT     AG L A+GL+ IL+  LT+Y        +P        T    EA   Q+
Sbjct: 83  PLRNTVNANLAGLLSALGLIIILTGALTLYA-----NSKPPKPVKSVATPNPPEA--FQS 135

Query: 166 AEGWSQXXXXXXXXGVSGAVWAYFLLYVLDL 74
           +EGW+         G+ GAV AYFL   L+L
Sbjct: 136 SEGWNNFASAFLIGGIGGAVVAYFLTSNLEL 166



to top

>PSAL_ISOGA (Q5ENP6) Photosystem I reaction center subunit XI (PSI-L) (PSI|
           subunit V)
          Length = 147

 Score =  124 bits (311), Expect = 2e-28
 Identities = 61/146 (41%), Positives = 85/146 (58%)
 Frame = -3

Query: 526 PINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFALTG 347
           P N DPF+G+L TPVT+S     YL NLP YR  ++PLLRG+E+G+AHGY L+GPF + G
Sbjct: 9   PFNNDPFVGNLSTPVTTSTATKLYLGNLPIYRKGLTPLLRGLEIGMAHGYFLIGPFYILG 68

Query: 346 PLRNTPVHGQAGTLGAIGLVSILSVCLTMYGVASFNEGEPSTAPVLTLTGRKKEADKLQT 167
           PLRN+P     G   A GL+ IL++ LT+YG+ASF +                  + L++
Sbjct: 69  PLRNSPNALLVGLFSAFGLIIILTLALTIYGLASFQD--------------NGVGENLES 114

Query: 166 AEGWSQXXXXXXXXGVSGAVWAYFLL 89
           ++GW           + GA  AY +L
Sbjct: 115 SKGWRNFTSGFTIGALGGASVAYLVL 140



to top

>PSAL_ODOSI (P49486) Photosystem I reaction center subunit XI (PSI-L) (PSI|
           subunit V)
          Length = 150

 Score =  122 bits (305), Expect = 8e-28
 Identities = 60/126 (47%), Positives = 83/126 (65%)
 Frame = -3

Query: 526 PINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFALTG 347
           P N DPF+G L TP+TSS +    L NLPAYR  ++PLLRG+E+GLAHGY L+GPF   G
Sbjct: 7   PYNDDPFVGHLATPITSSSITRAILKNLPAYRFGLTPLLRGLEIGLAHGYFLMGPFVKLG 66

Query: 346 PLRNTPVHGQAGTLGAIGLVSILSVCLTMYGVASFNEGEPSTAPVLTLTGRKKEADKLQT 167
           PLRN+ +   +G L  IGL+ IL++ LT+YGVA+F +G+ +           + ++ LQT
Sbjct: 67  PLRNSDIALFSGFLSTIGLILILTLGLTIYGVAAFGQGQTT-----------ENSNDLQT 115

Query: 166 AEGWSQ 149
            + W Q
Sbjct: 116 KKAWDQ 121



to top

>PSAL_SYNP7 (P95822) Photosystem I reaction center subunit XI (PSI-L) (PSI|
           subunit V)
          Length = 166

 Score =  119 bits (298), Expect = 5e-27
 Identities = 63/142 (44%), Positives = 87/142 (61%)
 Frame = -3

Query: 517 GDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFALTGPLR 338
           G P IG+L TP+ SSP    +++ LP YR  +S   RG+E+G+AHG+LL GPF++ GPLR
Sbjct: 10  GTPEIGNLATPINSSPFTRTFINALPIYRRGLSSNRRGLEIGMAHGFLLYGPFSILGPLR 69

Query: 337 NTPVHGQAGTLGAIGLVSILSVCLTMYGVASFNEGEPSTAPVLTLTGRKKEADKLQTAEG 158
           NT   G AG L  +GLV IL+VCL++YG    N G   +A   T+T       +L T EG
Sbjct: 70  NTETAGSAGLLATVGLVVILTVCLSLYG----NAGSGPSAAESTVT-TPNPPQELFTKEG 124

Query: 157 WSQXXXXXXXXGVSGAVWAYFL 92
           WS+        G+ GA +A++L
Sbjct: 125 WSEFTSGFILGGLGGAFFAFYL 146



to top

>PSAL_SYNP2 (Q54753) Photosystem I reaction center subunit XI (PSI-L) (PSI|
           subunit V)
          Length = 152

 Score =  118 bits (296), Expect = 9e-27
 Identities = 64/150 (42%), Positives = 86/150 (57%)
 Frame = -3

Query: 517 GDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFALTGPLR 338
           GDP +G+L TP+ +S     +++NLP YR  +S   RG+EVG+AHGY L GPFAL GPLR
Sbjct: 8   GDPQVGNLATPINASAFSKAFINNLPGYRQGLSAQRRGLEVGMAHGYFLYGPFALLGPLR 67

Query: 337 NTPVHGQAGTLGAIGLVSILSVCLTMYGVASFNEGEPSTAPVLTLTGRKKEADKLQTAEG 158
           N    G AG LG +GL+S+L++ L++YG          + P  TLT      + L T EG
Sbjct: 68  NADFAGVAGLLGTVGLISLLTLALSLYGSVGV------STPTATLT-TPNPPENLGTKEG 120

Query: 157 WSQXXXXXXXXGVSGAVWAYFLLYVLDLPY 68
           WS+        G  GA+ AY L   L + Y
Sbjct: 121 WSEFAAGFLIGGCGGALVAYGLCIALPMMY 150



to top

>PSAL_SYNP6 (P31084) Photosystem I reaction center subunit XI (PSI-L) (PSI|
           subunit V)
          Length = 165

 Score =  115 bits (288), Expect = 7e-26
 Identities = 62/142 (43%), Positives = 84/142 (59%)
 Frame = -3

Query: 517 GDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFALTGPLR 338
           G P IG L TP  SSP    +++ LP YR  +S   RG+E+G+AHG+LL GP ++ GPLR
Sbjct: 9   GTPEIGDLATPTNSSPFTRTFINALPIYRRGLSSNRRGLEIGMAHGFLLYGPLSILGPLR 68

Query: 337 NTPVHGQAGTLGAIGLVSILSVCLTMYGVASFNEGEPSTAPVLTLTGRKKEADKLQTAEG 158
           NT   G AG L  +GLV IL+VCL++YG    N G   +A   T+T       +L T EG
Sbjct: 69  NTETAGSAGLLATVGLVVILTVCLSLYG----NAGSGPSAAESTVT-TPNPPQELFTKEG 123

Query: 157 WSQXXXXXXXXGVSGAVWAYFL 92
           WS+        G+ GA +A++L
Sbjct: 124 WSEFTSGFILGGLGGAFFAFYL 145



to top

>PSAL_PROMA (O87787) Photosystem I reaction center subunit XI (PSI-L) (PSI|
           subunit V)
          Length = 199

 Score =  102 bits (254), Expect = 6e-22
 Identities = 65/150 (43%), Positives = 79/150 (52%), Gaps = 3/150 (2%)
 Frame = -3

Query: 514 DPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFALTGPLRN 335
           DP +G+L TPV S      +L+NLP YR  +SP  RG+EVG A GYLL GP+A+TGPLRN
Sbjct: 44  DPCVGNLSTPVNSGYFTKAFLNNLPFYRGGLSPNFRGLEVGAAFGYLLYGPYAMTGPLRN 103

Query: 334 TPVHGQAGTLGAIGLVSILSVCLTMYGVASFNEGEPSTAPVL---TLTGRKKEADKLQTA 164
           T     AG LG IG V IL+  L +Y         P  AP +     T     AD L T 
Sbjct: 104 TDYALTAGLLGTIGAVHILTALLVLYNA-------PGKAPNIQPSDCTINNPPAD-LFTR 155

Query: 163 EGWSQXXXXXXXXGVSGAVWAYFLLYVLDL 74
            GW+         G  GAV+A+ L   L L
Sbjct: 156 SGWADFTSGFWLGGCGGAVFAWLLCGTLHL 185



to top

>PSAL_GLOVI (Q7NIE7) Photosystem I reaction center subunit XI (PSI-L) (PSI|
           subunit V)
          Length = 147

 Score = 95.5 bits (236), Expect = 8e-20
 Identities = 57/147 (38%), Positives = 81/147 (55%)
 Frame = -3

Query: 514 DPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFALTGPLRN 335
           DP  G+L TPV +S  + W++ NLP  R  +    RG+E+G+AHGY L+GPFAL GPLRN
Sbjct: 11  DPQEGTLLTPVNNSTAIRWFIDNLPINRVGMDEFTRGLEIGMAHGYWLIGPFALLGPLRN 70

Query: 334 TPVHGQAGTLGAIGLVSILSVCLTMYGVASFNEGEPSTAPVLTLTGRKKEADKLQTAEGW 155
           T +   AG +  IGL+ I ++ L+  G AS  E  P+            E D+    +GW
Sbjct: 71  TELGLVAGLVSTIGLLLISTIGLS--GYASLVEDVPT------------EFDR----KGW 112

Query: 154 SQXXXXXXXXGVSGAVWAYFLLYVLDL 74
           S+        GV GA++A+ +L    L
Sbjct: 113 SRLAGGFLVGGVGGAIFAFAILQFFPL 139



to top

>ICP0_BHV1J (P29128) Trans-acting transcriptional protein ICP0 (P135 protein)|
           (IER 2.9/ER2.6)
          Length = 676

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 23/85 (27%), Positives = 35/85 (41%)
 Frame = +3

Query: 198 PVRVSTGAVDGSPSLKEATPYMVRQTLRMETSPMAPSVPACPCTGVLRSGPVSAKGPTRR 377
           P   S GA  G+P+   A            +S  +P+V A   +    +  +S + PT  
Sbjct: 509 PGPASAGAQIGTPAAAAAVTAAAAAPSVARSSAPSPAVTAAATS---TAAAISTRAPTPS 565

Query: 378 *PWARPTSMPRRSGLTAVR*AGRLE 452
                P + PRR+G  A+  A R E
Sbjct: 566 PAGRAPAADPRRAGAPALAGAARAE 590



to top

>ETS3_DROME (P29774) DNA-binding protein D-ETS-3|
          Length = 490

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 20/65 (30%), Positives = 31/65 (47%)
 Frame = -3

Query: 355 LTGPLRNTPVHGQAGTLGAIGLVSILSVCLTMYGVASFNEGEPSTAPVLTLTGRKKEADK 176
           LT  L   PV    G    +GL    +V + + GV ++N    STA VL+ +G   +  +
Sbjct: 86  LTDSLDTLPVQSGNGGGNCLGLPHNPNVGVGVAGVLNYNAVSSSTAGVLSSSGNGVQRHR 145

Query: 175 LQTAE 161
           L T +
Sbjct: 146 LDTLQ 150



to top

>CBP_HUMAN (Q92793) CREB-binding protein (EC 2.3.1.48)|
          Length = 2442

 Score = 28.9 bits (63), Expect = 9.1
 Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
 Frame = +3

Query: 213  TGAVDGSPSLKEATPYMVRQTLRMETSPMAPSVPACPCTGVLRSGP---VSAKGPTRR*P 383
            T A  G+P+ + +TP   +   + + SP++ S    P   V R+ P   VS   PT + P
Sbjct: 1886 TSAPPGTPTQQPSTPQTPQPPAQPQPSPVSMSPAGFP--SVARTQPPTTVSTGKPTSQVP 1943

Query: 384  WARPTSMPRRSGLTAVR 434
               P + P  + + A R
Sbjct: 1944 APPPPAQPPPAAVEAAR 1960



to top

>HRDB_STRCO (P18183) RNA polymerase principal sigma factor hrdB|
          Length = 511

 Score = 28.9 bits (63), Expect = 9.1
 Identities = 29/105 (27%), Positives = 43/105 (40%), Gaps = 7/105 (6%)
 Frame = +3

Query: 174 SLSASFLRPVRVSTGAVDGSPSLKEATPYMVRQ--TLRMETSPMAPSVPACPCTGVLRSG 347
           +L  S   P R        SP+ + AT  +  +  T R  T+P AP+ PA     V    
Sbjct: 68  TLMVSAAEPKRTRKSVAAKSPAKRTATKAVAAKPVTSRKATAPAAPAAPATEPAAVEEEA 127

Query: 348 P---VSAKGPTRR*PWARPTSMPRRSG--LTAVR*AGRLERYHAT 467
           P    +AK  T +   A+ T+  + +    TA +  G L    AT
Sbjct: 128 PAKKAAAKKTTAKKATAKKTTAKKAAAKKTTAKKEDGELLEDEAT 172



to top

>LRIG1_HUMAN (Q96JA1) Leucine-rich repeats and immunoglobulin-like domains|
           protein 1 precursor (LIG-1)
          Length = 1093

 Score = 28.9 bits (63), Expect = 9.1
 Identities = 18/47 (38%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
 Frame = +3

Query: 195 RPVRVSTGAVDGSPSLKEATPYMVR-QTLRMETSPMAPSVPACPCTG 332
           RPVR   GA   SP L      +VR + +     P AP   AC C G
Sbjct: 3   RPVRGGLGAPRRSPCLLLLWLVLVRLEPVTAAAGPRAPCAAACTCAG 49


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,669,637
Number of Sequences: 219361
Number of extensions: 877735
Number of successful extensions: 3010
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 2858
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2990
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4027872870
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top