Clone Name | rbasd22h13 |
---|---|
Clone Library Name | barley_pub |
>PSAL_HORVU (P23993) Photosystem I reaction center subunit XI, chloroplast| precursor (PSI-L) (PSI subunit V) Length = 209 Score = 296 bits (758), Expect = 2e-80 Identities = 148/156 (94%), Positives = 148/156 (94%) Frame = -3 Query: 526 PINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFALTG 347 PINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFALTG Sbjct: 54 PINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFALTG 113 Query: 346 PLRNTPVHGQAGTLGAIGLVSILSVCLTMYGVASFNEGEPSTAPVLTLTGRKKEADKLQT 167 PLRNTPVHGQAGTLGAIGLVSILSVCLTMYGVASFNEGEPSTAPVLTLTGRKKEADKLQT Sbjct: 114 PLRNTPVHGQAGTLGAIGLVSILSVCLTMYGVASFNEGEPSTAPVLTLTGRKKEADKLQT 173 Query: 166 AEGWSQXXXXXXXXGVSGAVWAYFLLYVLDLPYFFK 59 AEGWSQ GVSGAVWAYFLLYVLDLPYFFK Sbjct: 174 AEGWSQFTGGFFFGGVSGAVWAYFLLYVLDLPYFFK 209
>PSAL_CUCSA (Q39654) Photosystem I reaction center subunit XI, chloroplast| precursor (PSI-L) (PSI subunit V) Length = 217 Score = 247 bits (630), Expect = 2e-65 Identities = 121/156 (77%), Positives = 131/156 (83%) Frame = -3 Query: 526 PINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFALTG 347 PINGDPFIGSLETPVTSSPL+AWYLSNLPAYRTAVSPLLRGIEVGLAHG+ LVGPF G Sbjct: 62 PINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKAG 121 Query: 346 PLRNTPVHGQAGTLGAIGLVSILSVCLTMYGVASFNEGEPSTAPVLTLTGRKKEADKLQT 167 PLRNT G AG+L A GL+ ILSVCLTMYGVASFNEGEPSTAP LTLTGRKK D LQT Sbjct: 122 PLRNTAYAGGAGSLAAGGLIVILSVCLTMYGVASFNEGEPSTAPSLTLTGRKKTPDPLQT 181 Query: 166 AEGWSQXXXXXXXXGVSGAVWAYFLLYVLDLPYFFK 59 A+GW++ G+SG +WAYFLLYVLDLPY+ K Sbjct: 182 ADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK 217
>PSAL_SPIOL (Q41385) Photosystem I reaction center subunit XI, chloroplast| precursor (PSI-L) (PSI subunit V) Length = 216 Score = 239 bits (610), Expect = 3e-63 Identities = 114/156 (73%), Positives = 130/156 (83%) Frame = -3 Query: 526 PINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFALTG 347 P+NGDPFIG LETPVTSSPL+AWYLSNLPAYRTAV+PLLRG+EVGLAHG+LLVGPF G Sbjct: 61 PLNGDPFIGGLETPVTSSPLIAWYLSNLPAYRTAVNPLLRGVEVGLAHGFLLVGPFVKAG 120 Query: 346 PLRNTPVHGQAGTLGAIGLVSILSVCLTMYGVASFNEGEPSTAPVLTLTGRKKEADKLQT 167 PLRNT G AG+L A GLV ILS+CLTMYG+ASF EGEPS AP LTLTGRKK+ D+LQ+ Sbjct: 121 PLRNTEYAGAAGSLAAAGLVVILSMCLTMYGIASFKEGEPSIAPALTLTGRKKQPDQLQS 180 Query: 166 AEGWSQXXXXXXXXGVSGAVWAYFLLYVLDLPYFFK 59 A+GW++ GVSG WA FL+YVLDLPY+FK Sbjct: 181 ADGWAKFTGGFFFGGVSGVTWACFLMYVLDLPYYFK 216
>PSAL_ARATH (Q9SUI4) Photosystem I reaction center subunit XI, chloroplast| precursor (PSI-L) (PSI subunit V) Length = 219 Score = 239 bits (610), Expect = 3e-63 Identities = 114/156 (73%), Positives = 129/156 (82%) Frame = -3 Query: 526 PINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFALTG 347 PINGDPFIGSLETPVTSSPL+AWYLSNLP YRTAV+PLLRG+EVGLAHG+ LVGPF G Sbjct: 64 PINGDPFIGSLETPVTSSPLIAWYLSNLPGYRTAVNPLLRGVEVGLAHGFFLVGPFVKAG 123 Query: 346 PLRNTPVHGQAGTLGAIGLVSILSVCLTMYGVASFNEGEPSTAPVLTLTGRKKEADKLQT 167 PLRNT G AG+L A GLV ILS+CLT+YG++SF EGEPS AP LTLTGRKK+ D+LQT Sbjct: 124 PLRNTAYAGSAGSLAAAGLVVILSMCLTIYGISSFKEGEPSIAPSLTLTGRKKQPDQLQT 183 Query: 166 AEGWSQXXXXXXXXGVSGAVWAYFLLYVLDLPYFFK 59 A+GW++ G+SG WAYFLLYVLDLPYF K Sbjct: 184 ADGWAKFTGGFFFGGISGVTWAYFLLYVLDLPYFVK 219
>PSAL_CYACA (Q9TM17) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 152 Score = 135 bits (341), Expect = 5e-32 Identities = 66/146 (45%), Positives = 88/146 (60%) Frame = -3 Query: 526 PINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFALTG 347 P +PF+G+L TPV SS + WYL NLP YR +SPLLRG+E+G+AHGY ++GPF G Sbjct: 7 PYGSNPFVGNLSTPVNSSKVTIWYLKNLPIYRRGLSPLLRGLEIGMAHGYFIIGPFYKLG 66 Query: 346 PLRNTPVHGQAGTLGAIGLVSILSVCLTMYGVASFNEGEPSTAPVLTLTGRKKEADKLQT 167 PLRNT + +G + AIGL+ I S+ + +YG+ +F+ E + DKLQT Sbjct: 67 PLRNTDLSLLSGLIAAIGLIIISSIAMIIYGIVTFDNSENN--------------DKLQT 112 Query: 166 AEGWSQXXXXXXXXGVSGAVWAYFLL 89 A GW Q V GA +AY LL Sbjct: 113 ANGWRQLASGFLLGAVGGAGFAYILL 138
>PSAL_GRATL (Q6B8P4) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 150 Score = 135 bits (339), Expect = 9e-32 Identities = 70/144 (48%), Positives = 89/144 (61%) Frame = -3 Query: 520 NGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFALTGPL 341 N DPF+G+L TPV++S L+NLPAYR +SPLLRG+E+G+AHGY LVGPF GPL Sbjct: 9 NNDPFLGNLSTPVSTSTFTKGLLNNLPAYRRGLSPLLRGLEIGMAHGYFLVGPFDKLGPL 68 Query: 340 RNTPVHGQAGTLGAIGLVSILSVCLTMYGVASFNEGEPSTAPVLTLTGRKKEADKLQTAE 161 RNT V +G L A+GL+ IL+VCL+MYG SF++ + D LQT E Sbjct: 69 RNTDVALLSGFLSAVGLIIILTVCLSMYGNVSFDKDDAK--------------DLLQTTE 114 Query: 160 GWSQXXXXXXXXGVSGAVWAYFLL 89 GW Q V G+ +AY LL Sbjct: 115 GWGQFTAGFLVGAVGGSGFAYLLL 138
>PSAL_PORPU (P51222) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 153 Score = 134 bits (337), Expect = 2e-31 Identities = 70/146 (47%), Positives = 86/146 (58%) Frame = -3 Query: 526 PINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFALTG 347 P N DPF+G+L TPV++S L NLPAYR +SPLLRG+E+G+AHGY L+GPF G Sbjct: 7 PYNDDPFVGNLSTPVSTSSFSKGLLGNLPAYRRGLSPLLRGLEIGMAHGYFLIGPFDKLG 66 Query: 346 PLRNTPVHGQAGTLGAIGLVSILSVCLTMYGVASFNEGEPSTAPVLTLTGRKKEADKLQT 167 PLR T V AG L ++GL+ IL+ CL+MYG SF R D LQT Sbjct: 67 PLRGTDVALLAGFLSSVGLIIILTTCLSMYGNVSFT--------------RSDSKDPLQT 112 Query: 166 AEGWSQXXXXXXXXGVSGAVWAYFLL 89 AEGW Q V G+ +AY LL Sbjct: 113 AEGWGQFTAGFLVGAVGGSGFAYLLL 138
>PSAL_GUITH (O78469) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 152 Score = 134 bits (336), Expect = 2e-31 Identities = 66/146 (45%), Positives = 88/146 (60%) Frame = -3 Query: 526 PINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFALTG 347 P N DPF+G+L TP+T+S LSNLPAYR +SPLLRG+E+G+ HGY LVGPF G Sbjct: 7 PYNDDPFVGNLATPITTSSFTRTLLSNLPAYRAGLSPLLRGLEIGMTHGYFLVGPFYKLG 66 Query: 346 PLRNTPVHGQAGTLGAIGLVSILSVCLTMYGVASFNEGEPSTAPVLTLTGRKKEADKLQT 167 PLRN+ V AG A+GL+ I++ CL +YGV SFN + ++LQ+ Sbjct: 67 PLRNSEVALLAGVFSALGLIIIMAACLAIYGVVSFNTND--------------GGEQLQS 112 Query: 166 AEGWSQXXXXXXXXGVSGAVWAYFLL 89 A+GW Q + GA +AY L+ Sbjct: 113 AKGWRQFTSGWLVGSIGGASFAYILI 138
>PSAL_SYNEL (Q8DGB4) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 155 Score = 130 bits (326), Expect = 3e-30 Identities = 63/146 (43%), Positives = 87/146 (59%) Frame = -3 Query: 526 PINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFALTG 347 P NGDPF+G L TP++ S LV ++ NLPAYR +SP+LRG+EVG+AHGY L+GP+ G Sbjct: 8 PYNGDPFVGHLSTPISDSGLVKTFIGNLPAYRQGLSPILRGLEVGMAHGYFLIGPWVKLG 67 Query: 346 PLRNTPVHGQAGTLGAIGLVSILSVCLTMYGVASFNEGEPSTAPVLTLTGRKKEADKLQT 167 PLR++ V G + I L+ + + CL YG+ SF +G S +D L+T Sbjct: 68 PLRDSDVANLGGLISGIALILVATACLAAYGLVSFQKGGSS-------------SDPLKT 114 Query: 166 AEGWSQXXXXXXXXGVSGAVWAYFLL 89 +EGWSQ + A A+FLL Sbjct: 115 SEGWSQFTAGFFVGAMGSAFVAFFLL 140
>PSAL_CYAME (Q85FP8) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 140 Score = 127 bits (320), Expect = 1e-29 Identities = 65/146 (44%), Positives = 83/146 (56%) Frame = -3 Query: 526 PINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFALTG 347 P N DPF+G L TP+ SS L YLS LP YR VSP LRG+E+G+AHGY L+GPF G Sbjct: 7 PYNNDPFVGHLATPINSSSLTRAYLSQLPIYRRGVSPFLRGLEIGMAHGYFLIGPFVQLG 66 Query: 346 PLRNTPVHGQAGTLGAIGLVSILSVCLTMYGVASFNEGEPSTAPVLTLTGRKKEADKLQT 167 PLRNT + AG L AIGL+ IL++ + +YG SF ++ L++ Sbjct: 67 PLRNTDIKYLAGLLSAIGLIVILTLGMLLYGAVSFT----------------NDSQDLES 110 Query: 166 AEGWSQXXXXXXXXGVSGAVWAYFLL 89 +GW Q V GA +AY LL Sbjct: 111 VDGWRQLASGFLLGAVGGAGFAYLLL 136
>PSAL_SYNEN (P25902) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 148 Score = 127 bits (319), Expect = 2e-29 Identities = 62/146 (42%), Positives = 86/146 (58%) Frame = -3 Query: 526 PINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFALTG 347 P NGDPF+G L TP++ S LV ++ NLPAYR +SP+L G+EVG+AHGY L+GP+ G Sbjct: 7 PYNGDPFVGHLSTPISDSGLVKTFIGNLPAYRQGLSPILPGLEVGMAHGYFLIGPWVKLG 66 Query: 346 PLRNTPVHGQAGTLGAIGLVSILSVCLTMYGVASFNEGEPSTAPVLTLTGRKKEADKLQT 167 PLR++ V G + I L+ + + CL YG+ SF +G S +D L+T Sbjct: 67 PLRDSDVANLGGLISGIALILVATACLAAYGLVSFQKGGSS-------------SDPLKT 113 Query: 166 AEGWSQXXXXXXXXGVSGAVWAYFLL 89 +EGWSQ + A A+FLL Sbjct: 114 SEGWSQFTAGFFVGAMGSAFVAFFLL 139
>PSAL_SYNY3 (P37277) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 157 Score = 127 bits (318), Expect = 2e-29 Identities = 62/144 (43%), Positives = 86/144 (59%) Frame = -3 Query: 520 NGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFALTGPL 341 NGDPF+G L TP++ S ++ NLPAYR +SP+LRG+EVG+AHGY L+GP+ L GPL Sbjct: 12 NGDPFVGHLSTPISDSAFTRTFIGNLPAYRKGLSPILRGLEVGMAHGYFLIGPWTLLGPL 71 Query: 340 RNTPVHGQAGTLGAIGLVSILSVCLTMYGVASFNEGEPSTAPVLTLTGRKKEADKLQTAE 161 R++ G +GA+ L+ + + L+ YG+ +F G + D LQTA+ Sbjct: 72 RDSEYQYIGGLIGALALILVATAALSSYGLVTFQ-------------GEQGSGDTLQTAD 118 Query: 160 GWSQXXXXXXXXGVSGAVWAYFLL 89 GWSQ G+ GA AYFLL Sbjct: 119 GWSQFAAGFFVGGMGGAFVAYFLL 142
>PSAL_ANASP (P58577) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 172 Score = 125 bits (314), Expect = 7e-29 Identities = 66/145 (45%), Positives = 87/145 (60%) Frame = -3 Query: 526 PINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFALTG 347 P DP G+LETPV +SPLV W+++NLPAYR ++P RG+EVG+AHGY L GPFA G Sbjct: 23 PAGRDPQWGNLETPVNASPLVKWFINNLPAYRPGLTPFRRGLEVGMAHGYFLFGPFAKLG 82 Query: 346 PLRNTPVHGQAGTLGAIGLVSILSVCLTMYGVASFNEGEPSTAPVLTLTGRKKEADKLQT 167 PLR+ AG LGAIGLV + ++ L++Y N P+ +T+ D Q+ Sbjct: 83 PLRDAANANLAGLLGAIGLVVLFTLALSLYA----NSNPPTALASVTV---PNPPDAFQS 135 Query: 166 AEGWSQXXXXXXXXGVSGAVWAYFL 92 EGW+ G+ GAV AYFL Sbjct: 136 KEGWNNFASAFLIGGIGGAVVAYFL 160
>PSAL_ANAVT (P31092) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 172 Score = 124 bits (312), Expect = 1e-28 Identities = 66/145 (45%), Positives = 86/145 (59%) Frame = -3 Query: 526 PINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFALTG 347 P DP G+LETPV +SPLV W+++NLPAYR ++P RG+EVG+AHGY L GPFA G Sbjct: 23 PAGRDPQWGNLETPVNASPLVKWFINNLPAYRPGLTPFRRGLEVGMAHGYFLFGPFAKLG 82 Query: 346 PLRNTPVHGQAGTLGAIGLVSILSVCLTMYGVASFNEGEPSTAPVLTLTGRKKEADKLQT 167 PLR+ AG LGAIGLV + ++ L++Y N P +T+ D Q+ Sbjct: 83 PLRDAANANLAGLLGAIGLVVLFTLSLSLYA----NSNPPKALASVTV---PNPPDAFQS 135 Query: 166 AEGWSQXXXXXXXXGVSGAVWAYFL 92 EGW+ G+ GAV AYFL Sbjct: 136 KEGWNNFASAFLIGGIGGAVVAYFL 160
>PSAL_MASLA (O31126) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 173 Score = 124 bits (311), Expect = 2e-28 Identities = 69/151 (45%), Positives = 87/151 (57%) Frame = -3 Query: 526 PINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFALTG 347 P DP IG LETP+ SSPLV W++ NLPAYR ++ RG+EVG+AHGY + GPFA G Sbjct: 23 PAYRDPQIGDLETPINSSPLVKWFIGNLPAYRPGITTFRRGLEVGMAHGYWIFGPFAKLG 82 Query: 346 PLRNTPVHGQAGTLGAIGLVSILSVCLTMYGVASFNEGEPSTAPVLTLTGRKKEADKLQT 167 PLRNT AG L A+GL+ IL+ LT+Y +P T EA Q+ Sbjct: 83 PLRNTVNANLAGLLSALGLIIILTGALTLYA-----NSKPPKPVKSVATPNPPEA--FQS 135 Query: 166 AEGWSQXXXXXXXXGVSGAVWAYFLLYVLDL 74 +EGW+ G+ GAV AYFL L+L Sbjct: 136 SEGWNNFASAFLIGGIGGAVVAYFLTSNLEL 166
>PSAL_ISOGA (Q5ENP6) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 147 Score = 124 bits (311), Expect = 2e-28 Identities = 61/146 (41%), Positives = 85/146 (58%) Frame = -3 Query: 526 PINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFALTG 347 P N DPF+G+L TPVT+S YL NLP YR ++PLLRG+E+G+AHGY L+GPF + G Sbjct: 9 PFNNDPFVGNLSTPVTTSTATKLYLGNLPIYRKGLTPLLRGLEIGMAHGYFLIGPFYILG 68 Query: 346 PLRNTPVHGQAGTLGAIGLVSILSVCLTMYGVASFNEGEPSTAPVLTLTGRKKEADKLQT 167 PLRN+P G A GL+ IL++ LT+YG+ASF + + L++ Sbjct: 69 PLRNSPNALLVGLFSAFGLIIILTLALTIYGLASFQD--------------NGVGENLES 114 Query: 166 AEGWSQXXXXXXXXGVSGAVWAYFLL 89 ++GW + GA AY +L Sbjct: 115 SKGWRNFTSGFTIGALGGASVAYLVL 140
>PSAL_ODOSI (P49486) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 150 Score = 122 bits (305), Expect = 8e-28 Identities = 60/126 (47%), Positives = 83/126 (65%) Frame = -3 Query: 526 PINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFALTG 347 P N DPF+G L TP+TSS + L NLPAYR ++PLLRG+E+GLAHGY L+GPF G Sbjct: 7 PYNDDPFVGHLATPITSSSITRAILKNLPAYRFGLTPLLRGLEIGLAHGYFLMGPFVKLG 66 Query: 346 PLRNTPVHGQAGTLGAIGLVSILSVCLTMYGVASFNEGEPSTAPVLTLTGRKKEADKLQT 167 PLRN+ + +G L IGL+ IL++ LT+YGVA+F +G+ + + ++ LQT Sbjct: 67 PLRNSDIALFSGFLSTIGLILILTLGLTIYGVAAFGQGQTT-----------ENSNDLQT 115 Query: 166 AEGWSQ 149 + W Q Sbjct: 116 KKAWDQ 121
>PSAL_SYNP7 (P95822) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 166 Score = 119 bits (298), Expect = 5e-27 Identities = 63/142 (44%), Positives = 87/142 (61%) Frame = -3 Query: 517 GDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFALTGPLR 338 G P IG+L TP+ SSP +++ LP YR +S RG+E+G+AHG+LL GPF++ GPLR Sbjct: 10 GTPEIGNLATPINSSPFTRTFINALPIYRRGLSSNRRGLEIGMAHGFLLYGPFSILGPLR 69 Query: 337 NTPVHGQAGTLGAIGLVSILSVCLTMYGVASFNEGEPSTAPVLTLTGRKKEADKLQTAEG 158 NT G AG L +GLV IL+VCL++YG N G +A T+T +L T EG Sbjct: 70 NTETAGSAGLLATVGLVVILTVCLSLYG----NAGSGPSAAESTVT-TPNPPQELFTKEG 124 Query: 157 WSQXXXXXXXXGVSGAVWAYFL 92 WS+ G+ GA +A++L Sbjct: 125 WSEFTSGFILGGLGGAFFAFYL 146
>PSAL_SYNP2 (Q54753) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 152 Score = 118 bits (296), Expect = 9e-27 Identities = 64/150 (42%), Positives = 86/150 (57%) Frame = -3 Query: 517 GDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFALTGPLR 338 GDP +G+L TP+ +S +++NLP YR +S RG+EVG+AHGY L GPFAL GPLR Sbjct: 8 GDPQVGNLATPINASAFSKAFINNLPGYRQGLSAQRRGLEVGMAHGYFLYGPFALLGPLR 67 Query: 337 NTPVHGQAGTLGAIGLVSILSVCLTMYGVASFNEGEPSTAPVLTLTGRKKEADKLQTAEG 158 N G AG LG +GL+S+L++ L++YG + P TLT + L T EG Sbjct: 68 NADFAGVAGLLGTVGLISLLTLALSLYGSVGV------STPTATLT-TPNPPENLGTKEG 120 Query: 157 WSQXXXXXXXXGVSGAVWAYFLLYVLDLPY 68 WS+ G GA+ AY L L + Y Sbjct: 121 WSEFAAGFLIGGCGGALVAYGLCIALPMMY 150
>PSAL_SYNP6 (P31084) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 165 Score = 115 bits (288), Expect = 7e-26 Identities = 62/142 (43%), Positives = 84/142 (59%) Frame = -3 Query: 517 GDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFALTGPLR 338 G P IG L TP SSP +++ LP YR +S RG+E+G+AHG+LL GP ++ GPLR Sbjct: 9 GTPEIGDLATPTNSSPFTRTFINALPIYRRGLSSNRRGLEIGMAHGFLLYGPLSILGPLR 68 Query: 337 NTPVHGQAGTLGAIGLVSILSVCLTMYGVASFNEGEPSTAPVLTLTGRKKEADKLQTAEG 158 NT G AG L +GLV IL+VCL++YG N G +A T+T +L T EG Sbjct: 69 NTETAGSAGLLATVGLVVILTVCLSLYG----NAGSGPSAAESTVT-TPNPPQELFTKEG 123 Query: 157 WSQXXXXXXXXGVSGAVWAYFL 92 WS+ G+ GA +A++L Sbjct: 124 WSEFTSGFILGGLGGAFFAFYL 145
>PSAL_PROMA (O87787) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 199 Score = 102 bits (254), Expect = 6e-22 Identities = 65/150 (43%), Positives = 79/150 (52%), Gaps = 3/150 (2%) Frame = -3 Query: 514 DPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFALTGPLRN 335 DP +G+L TPV S +L+NLP YR +SP RG+EVG A GYLL GP+A+TGPLRN Sbjct: 44 DPCVGNLSTPVNSGYFTKAFLNNLPFYRGGLSPNFRGLEVGAAFGYLLYGPYAMTGPLRN 103 Query: 334 TPVHGQAGTLGAIGLVSILSVCLTMYGVASFNEGEPSTAPVL---TLTGRKKEADKLQTA 164 T AG LG IG V IL+ L +Y P AP + T AD L T Sbjct: 104 TDYALTAGLLGTIGAVHILTALLVLYNA-------PGKAPNIQPSDCTINNPPAD-LFTR 155 Query: 163 EGWSQXXXXXXXXGVSGAVWAYFLLYVLDL 74 GW+ G GAV+A+ L L L Sbjct: 156 SGWADFTSGFWLGGCGGAVFAWLLCGTLHL 185
>PSAL_GLOVI (Q7NIE7) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 147 Score = 95.5 bits (236), Expect = 8e-20 Identities = 57/147 (38%), Positives = 81/147 (55%) Frame = -3 Query: 514 DPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFALTGPLRN 335 DP G+L TPV +S + W++ NLP R + RG+E+G+AHGY L+GPFAL GPLRN Sbjct: 11 DPQEGTLLTPVNNSTAIRWFIDNLPINRVGMDEFTRGLEIGMAHGYWLIGPFALLGPLRN 70 Query: 334 TPVHGQAGTLGAIGLVSILSVCLTMYGVASFNEGEPSTAPVLTLTGRKKEADKLQTAEGW 155 T + AG + IGL+ I ++ L+ G AS E P+ E D+ +GW Sbjct: 71 TELGLVAGLVSTIGLLLISTIGLS--GYASLVEDVPT------------EFDR----KGW 112 Query: 154 SQXXXXXXXXGVSGAVWAYFLLYVLDL 74 S+ GV GA++A+ +L L Sbjct: 113 SRLAGGFLVGGVGGAIFAFAILQFFPL 139
>ICP0_BHV1J (P29128) Trans-acting transcriptional protein ICP0 (P135 protein)| (IER 2.9/ER2.6) Length = 676 Score = 29.6 bits (65), Expect = 5.3 Identities = 23/85 (27%), Positives = 35/85 (41%) Frame = +3 Query: 198 PVRVSTGAVDGSPSLKEATPYMVRQTLRMETSPMAPSVPACPCTGVLRSGPVSAKGPTRR 377 P S GA G+P+ A +S +P+V A + + +S + PT Sbjct: 509 PGPASAGAQIGTPAAAAAVTAAAAAPSVARSSAPSPAVTAAATS---TAAAISTRAPTPS 565 Query: 378 *PWARPTSMPRRSGLTAVR*AGRLE 452 P + PRR+G A+ A R E Sbjct: 566 PAGRAPAADPRRAGAPALAGAARAE 590
>ETS3_DROME (P29774) DNA-binding protein D-ETS-3| Length = 490 Score = 29.6 bits (65), Expect = 5.3 Identities = 20/65 (30%), Positives = 31/65 (47%) Frame = -3 Query: 355 LTGPLRNTPVHGQAGTLGAIGLVSILSVCLTMYGVASFNEGEPSTAPVLTLTGRKKEADK 176 LT L PV G +GL +V + + GV ++N STA VL+ +G + + Sbjct: 86 LTDSLDTLPVQSGNGGGNCLGLPHNPNVGVGVAGVLNYNAVSSSTAGVLSSSGNGVQRHR 145 Query: 175 LQTAE 161 L T + Sbjct: 146 LDTLQ 150
>CBP_HUMAN (Q92793) CREB-binding protein (EC 2.3.1.48)| Length = 2442 Score = 28.9 bits (63), Expect = 9.1 Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 3/77 (3%) Frame = +3 Query: 213 TGAVDGSPSLKEATPYMVRQTLRMETSPMAPSVPACPCTGVLRSGP---VSAKGPTRR*P 383 T A G+P+ + +TP + + + SP++ S P V R+ P VS PT + P Sbjct: 1886 TSAPPGTPTQQPSTPQTPQPPAQPQPSPVSMSPAGFP--SVARTQPPTTVSTGKPTSQVP 1943 Query: 384 WARPTSMPRRSGLTAVR 434 P + P + + A R Sbjct: 1944 APPPPAQPPPAAVEAAR 1960
>HRDB_STRCO (P18183) RNA polymerase principal sigma factor hrdB| Length = 511 Score = 28.9 bits (63), Expect = 9.1 Identities = 29/105 (27%), Positives = 43/105 (40%), Gaps = 7/105 (6%) Frame = +3 Query: 174 SLSASFLRPVRVSTGAVDGSPSLKEATPYMVRQ--TLRMETSPMAPSVPACPCTGVLRSG 347 +L S P R SP+ + AT + + T R T+P AP+ PA V Sbjct: 68 TLMVSAAEPKRTRKSVAAKSPAKRTATKAVAAKPVTSRKATAPAAPAAPATEPAAVEEEA 127 Query: 348 P---VSAKGPTRR*PWARPTSMPRRSG--LTAVR*AGRLERYHAT 467 P +AK T + A+ T+ + + TA + G L AT Sbjct: 128 PAKKAAAKKTTAKKATAKKTTAKKAAAKKTTAKKEDGELLEDEAT 172
>LRIG1_HUMAN (Q96JA1) Leucine-rich repeats and immunoglobulin-like domains| protein 1 precursor (LIG-1) Length = 1093 Score = 28.9 bits (63), Expect = 9.1 Identities = 18/47 (38%), Positives = 21/47 (44%), Gaps = 1/47 (2%) Frame = +3 Query: 195 RPVRVSTGAVDGSPSLKEATPYMVR-QTLRMETSPMAPSVPACPCTG 332 RPVR GA SP L +VR + + P AP AC C G Sbjct: 3 RPVRGGLGAPRRSPCLLLLWLVLVRLEPVTAAAGPRAPCAAACTCAG 49 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 50,669,637 Number of Sequences: 219361 Number of extensions: 877735 Number of successful extensions: 3010 Number of sequences better than 10.0: 27 Number of HSP's better than 10.0 without gapping: 2858 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2990 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4027872870 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)