>gb|AF527610.1| Zea mays DNA methyltransferase DMT106 (dmt106) mRNA, complete cds
          Length = 2197

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 99/122 (81%)
 Strand = Plus / Minus

                                                                        
Query: 392  ccaccatcttttcagaattttcctgttcacatcagattcttcgatagacaccacacactt 451
            |||||| ||| | |||||||| || ||||| |||||||| || | ||| | |||||| ||
Sbjct: 1960 ccaccaccttcttagaatttttctattcacctcagattcctcaacagatatcacacattt 1901

                                                                        
Query: 452  cagaggaataccgagacgatgcagcgcaacttctgcacccccaactccactatagatgga 511
            || ||| || || |||||||| || || ||||||||||| ||||  ||||| ||||||||
Sbjct: 1900 caaagggatgcctagacgatgaagtgctacttctgcacctccaatgccactgtagatgga 1841

              
Query: 512  ta 513
            ||
Sbjct: 1840 ta 1839

>gb|AY105527.1| Zea mays PCO143520 mRNA sequence
          Length = 1628

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 99/122 (81%)
 Strand = Plus / Minus

                                                                        
Query: 392  ccaccatcttttcagaattttcctgttcacatcagattcttcgatagacaccacacactt 451
            |||||| ||| | |||||||| || ||||| |||||||| || | ||| | |||||| ||
Sbjct: 1271 ccaccaccttcttagaatttttctattcacctcagattcctcaacagatatcacacattt 1212

                                                                        
Query: 452  cagaggaataccgagacgatgcagcgcaacttctgcacccccaactccactatagatgga 511
            || ||| || || |||||||| || || ||||||||||| ||||  ||||| ||||||||
Sbjct: 1211 caaagggatgcctagacgatgaagtgctacttctgcacctccaatgccactgtagatgga 1152

              
Query: 512  ta 513
            ||
Sbjct: 1151 ta 1150

>emb|AL590633.9| Mouse DNA sequence from clone RP23-211O23 on chromosome X, complete
             sequence
          Length = 179289

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 377   ctgctctgtttttgcccaccatctttt 403
             |||||||| ||||||||||||||||||
Sbjct: 29881 ctgctctggttttgcccaccatctttt 29855

>gb|AC026711.6| Homo sapiens chromosome 5 clone CTD-2093E18, complete sequence
          Length = 191309

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 334   tctttagcttccatatgccagg 355
             ||||||||||||||||||||||
Sbjct: 97687 tctttagcttccatatgccagg 97708

>gb|AC021842.7|AC021842 Homo sapiens chromosome 8, clone RP11-472N16, complete sequence
          Length = 190044

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 204   tcaaaatattttttggagtcca 225
             ||||||||||||||||||||||
Sbjct: 35736 tcaaaatattttttggagtcca 35715

>gb|AC010281.4|AC010281 Homo sapiens chromosome 5 clone CTC-553B9, complete sequence
          Length = 160378

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 334    tctttagcttccatatgccagg 355
              ||||||||||||||||||||||
Sbjct: 137657 tctttagcttccatatgccagg 137636

>gb|AC087552.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0519E07,
            complete sequence
          Length = 151399

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 102/129 (79%)
 Strand = Plus / Minus

                                                                        
Query: 392  ccaccatcttttcagaattttcctgttcacatcagattcttcgatagacaccacacactt 451
            |||||| ||| ||| |||||||||||||  ||||||||  || | ||| || ||||||| 
Sbjct: 5711 ccaccaccttctcaaaattttcctgttcgtatcagattggtcaacagatactacacactg 5652

                                                                        
Query: 452  cagaggaataccgagacgatgcagcgcaacttctgcacccccaactccactatagatgga 511
             || || || || || ||||| || |||| | ||||||| |||| |||||| ||||| ||
Sbjct: 5651 tagtggtatccctaggcgatggagggcaattgctgcacctccaattccactgtagattga 5592

                     
Query: 512  tagtaccct 520
            ||| |||||
Sbjct: 5591 tagcaccct 5583

>gb|AC118288.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0077L08, complete sequence
          Length = 115640

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 102/129 (79%)
 Strand = Plus / Minus

                                                                         
Query: 392   ccaccatcttttcagaattttcctgttcacatcagattcttcgatagacaccacacactt 451
             |||||| ||| ||| |||||||||||||  ||||||||  || | ||| || ||||||| 
Sbjct: 91608 ccaccaccttctcaaaattttcctgttcgtatcagattggtcaacagatactacacactg 91549

                                                                         
Query: 452   cagaggaataccgagacgatgcagcgcaacttctgcacccccaactccactatagatgga 511
              || || || || || ||||| || |||| | ||||||| |||| |||||| ||||| ||
Sbjct: 91548 tagtggtatccctaggcgatggagggcaattgctgcacctccaattccactgtagattga 91489

                      
Query: 512   tagtaccct 520
             ||| |||||
Sbjct: 91488 tagcaccct 91480

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 102/129 (79%)
 Strand = Plus / Minus

                                                                           
Query: 392     ccaccatcttttcagaattttcctgttcacatcagattcttcgatagacaccacacactt 451
               |||||| ||| ||| |||||||||||||  ||||||||  || | ||| || ||||||| 
Sbjct: 1912834 ccaccaccttctcaaaattttcctgttcgtatcagattggtcaacagatactacacactg 1912775

                                                                           
Query: 452     cagaggaataccgagacgatgcagcgcaacttctgcacccccaactccactatagatgga 511
                || || || || || ||||| || |||| | ||||||| |||| |||||| ||||| ||
Sbjct: 1912774 tagtggtatccctaggcgatggagggcaattgctgcacctccaattccactgtagattga 1912715

                        
Query: 512     tagtaccct 520
               ||| |||||
Sbjct: 1912714 tagcaccct 1912706

>dbj|AK067302.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013102H14, full
            insert sequence
          Length = 3100

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 102/129 (79%)
 Strand = Plus / Minus

                                                                        
Query: 392  ccaccatcttttcagaattttcctgttcacatcagattcttcgatagacaccacacactt 451
            |||||| ||| ||| |||||||||||||  ||||||||  || | ||| || ||||||| 
Sbjct: 2226 ccaccaccttctcaaaattttcctgttcgtatcagattggtcaacagatactacacactg 2167

                                                                        
Query: 452  cagaggaataccgagacgatgcagcgcaacttctgcacccccaactccactatagatgga 511
             || || || || || ||||| || |||| | ||||||| |||| |||||| ||||| ||
Sbjct: 2166 tagtggtatccctaggcgatggagggcaattgctgcacctccaattccactgtagattga 2107

                     
Query: 512  tagtaccct 520
            ||| |||||
Sbjct: 2106 tagcaccct 2098

>dbj|AK063482.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-116-B11, full
            insert sequence
          Length = 2694

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 102/129 (79%)
 Strand = Plus / Minus

                                                                        
Query: 392  ccaccatcttttcagaattttcctgttcacatcagattcttcgatagacaccacacactt 451
            |||||| ||| ||| |||||||||||||  ||||||||  || | ||| || ||||||| 
Sbjct: 2228 ccaccaccttctcaaaattttcctgttcgtatcagattggtcaacagatactacacactg 2169

                                                                        
Query: 452  cagaggaataccgagacgatgcagcgcaacttctgcacccccaactccactatagatgga 511
             || || || || || ||||| || |||| | ||||||| |||| |||||| ||||| ||
Sbjct: 2168 tagtggtatccctaggcgatggagggcaattgctgcacctccaattccactgtagattga 2109

                     
Query: 512  tagtaccct 520
            ||| |||||
Sbjct: 2108 tagcaccct 2100

>ref|XM_956720.1| Neurospora crassa OR74A hypothetical protein (NCU08287.1) partial
            mRNA
          Length = 5499

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 449  cttcagaggaataccgagac 468
            ||||||||||||||||||||
Sbjct: 2283 cttcagaggaataccgagac 2264

>ref|XM_328992.1| Neurospora crassa OR74A hypothetical protein (NCU08287.1) partial
            mRNA
          Length = 5499

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 449  cttcagaggaataccgagac 468
            ||||||||||||||||||||
Sbjct: 2283 cttcagaggaataccgagac 2264

>gb|BT014551.1| Lycopersicon esculentum clone 133972F, mRNA sequence
          Length = 2311

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                                
Query: 457  gaataccgagacgatgcagcgcaacttctgcacccccaactccactatagat 508
            ||||||| || |||||||  ||||||||||| || ||||  |||||||||||
Sbjct: 1854 gaataccaaggcgatgcaatgcaacttctgctccaccaataccactatagat 1803

>gb|AC132573.2| Mus musculus BAC clone RP24-410H24 from chromosome 15, complete
             sequence
          Length = 194219

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 477   gcaacttctgcacccccaac 496
             ||||||||||||||||||||
Sbjct: 12365 gcaacttctgcacccccaac 12346

>gb|AC125541.4| Mus musculus BAC clone RP23-237I10 from chromosome 15, complete sequence
          Length = 215447

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 477    gcaacttctgcacccccaac 496
              ||||||||||||||||||||
Sbjct: 131935 gcaacttctgcacccccaac 131916

>emb|AL358978.17| Human DNA sequence from clone RP11-271K10 on chromosome 10, complete
             sequence
          Length = 84224

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 23    agctggataaagagacagct 42
             ||||||||||||||||||||
Sbjct: 31597 agctggataaagagacagct 31578

>gb|AC154397.8| Mus musculus chromosome 7, clone RP23-53N23, complete sequence
          Length = 273314

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 437    agacaccacacacttcagag 456
              ||||||||||||||||||||
Sbjct: 236686 agacaccacacacttcagag 236705

>gb|AC079042.31| Mus musculus strain C57BL/6J chromosome 3 clone rp23-313f7, complete
             sequence
          Length = 197424

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 4     aaagagacagtagttctctagctg 27
             ||||||||||| ||||||||||||
Sbjct: 75474 aaagagacagtggttctctagctg 75451

>emb|AL671877.15| Mouse DNA sequence from clone RP23-214E3 on chromosome 3, complete
             sequence
          Length = 146015

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 4     aaagagacagtagttctctagctg 27
             ||||||||||| ||||||||||||
Sbjct: 29054 aaagagacagtggttctctagctg 29077


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,669,562
Number of Sequences: 3902068
Number of extensions: 5669562
Number of successful extensions: 119306
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 119246
Number of HSP's gapped (non-prelim): 65
length of query: 623
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 600
effective length of database: 17,143,297,704
effective search space: 10285978622400
effective search space used: 10285978622400
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)