ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd22g19 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_185232.2| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1557 Score = 174 bits (88), Expect = 2e-40 Identities = 306/376 (81%), Gaps = 2/376 (0%) Strand = Plus / Minus Query: 266 tcatggaccgttctgcaggtataacactccattttgttctctagggttcacatcttcttt 325 |||||||||||| | || ||| | || ||||||||| ||| ||||| | | |||||||| Sbjct: 1557 tcatggaccgttttccaagtacatcaatccattttgctctgtaggggccgcgtcttcttt 1498 Query: 326 tgctttcagaggcgtcgaagccaagttcttgataatcgcagcagataggtcaaactcagc 385 || | | ||||| || ||||| | ||||||||||| | |||| | || ||||| ||||| Sbjct: 1497 tgatcttagaggtgtggaagcaagattcttgataatggaagcatacagatcaaaatcagc 1438 Query: 386 tttgtacttgcagcagctggcctcgatccactcctctgcaaggcttgttgatacattgtc 445 |||||||||||||||||| ||||| ||||||| ||||||||||||||| | || |||| Sbjct: 1437 tttgtacttgcagcagctagcctcaatccacttctctgcaaggcttgtggccacgctgtc 1378 Query: 446 ttggctgtccctctcatgttcttcaatcgctggccttatctcgtcgtacagggcatcgat 505 ||| || ||||||||||| ||||| ||||| ||||||||||||||||||||| || || Sbjct: 1377 ttgactatccctctcatgctcttcgatcgccggccttatctcgtcgtacaggctgtcaat 1318 Query: 506 ttcggcagtcgcctgcttcttcacttcctcacagaacaatatctccctggcgtgccgcag 565 ||| |||| || | ||||||| |||||| || ||||||| | | | |||||| | Sbjct: 1317 ttcagcagcagcttcattcttcatttcctcgcaatacaatat-ttcttcacgtgccacct 1259 Query: 566 ctgatgctaaccgggcacaaatatctgcaacattcaattgcttgcgcagaccacgtttag 625 ||||||||||||| |||| ||| | ||||||||| ||||||||||| ||||||||||| Sbjct: 1258 ctgatgctaaccgatcacagatacccacaacattcagttgcttgcgcataccacgtttag 1199 Query: 626 cttttgccaccacgaa 641 ||||| |||||||||| Sbjct: 1198 ctttt-ccaccacgaa 1184
>dbj|AK073414.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033039I24, full insert sequence Length = 2025 Score = 174 bits (88), Expect = 2e-40 Identities = 306/376 (81%), Gaps = 2/376 (0%) Strand = Plus / Minus Query: 266 tcatggaccgttctgcaggtataacactccattttgttctctagggttcacatcttcttt 325 |||||||||||| | || ||| | || ||||||||| ||| ||||| | | |||||||| Sbjct: 1846 tcatggaccgttttccaagtacatcaatccattttgctctgtaggggccgcgtcttcttt 1787 Query: 326 tgctttcagaggcgtcgaagccaagttcttgataatcgcagcagataggtcaaactcagc 385 || | | ||||| || ||||| | ||||||||||| | |||| | || ||||| ||||| Sbjct: 1786 tgatcttagaggtgtggaagcaagattcttgataatggaagcatacagatcaaaatcagc 1727 Query: 386 tttgtacttgcagcagctggcctcgatccactcctctgcaaggcttgttgatacattgtc 445 |||||||||||||||||| ||||| ||||||| ||||||||||||||| | || |||| Sbjct: 1726 tttgtacttgcagcagctagcctcaatccacttctctgcaaggcttgtggccacgctgtc 1667 Query: 446 ttggctgtccctctcatgttcttcaatcgctggccttatctcgtcgtacagggcatcgat 505 ||| || ||||||||||| ||||| ||||| ||||||||||||||||||||| || || Sbjct: 1666 ttgactatccctctcatgctcttcgatcgccggccttatctcgtcgtacaggctgtcaat 1607 Query: 506 ttcggcagtcgcctgcttcttcacttcctcacagaacaatatctccctggcgtgccgcag 565 ||| |||| || | ||||||| |||||| || ||||||| | | | |||||| | Sbjct: 1606 ttcagcagcagcttcattcttcatttcctcgcaatacaatat-ttcttcacgtgccacct 1548 Query: 566 ctgatgctaaccgggcacaaatatctgcaacattcaattgcttgcgcagaccacgtttag 625 ||||||||||||| |||| ||| | ||||||||| ||||||||||| ||||||||||| Sbjct: 1547 ctgatgctaaccgatcacagatacccacaacattcagttgcttgcgcataccacgtttag 1488 Query: 626 cttttgccaccacgaa 641 ||||| |||||||||| Sbjct: 1487 ctttt-ccaccacgaa 1473
>emb|AL606632.5| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042L16, complete sequence Length = 163738 Score = 151 bits (76), Expect = 3e-33 Identities = 193/232 (83%) Strand = Plus / Minus Query: 266 tcatggaccgttctgcaggtataacactccattttgttctctagggttcacatcttcttt 325 |||||||||||| | || ||| | || ||||||||| ||| ||||| | | |||||||| Sbjct: 84462 tcatggaccgttttccaagtacatcaatccattttgctctgtaggggccgcgtcttcttt 84403 Query: 326 tgctttcagaggcgtcgaagccaagttcttgataatcgcagcagataggtcaaactcagc 385 || | | ||||| || ||||| | ||||||||||| | |||| | || ||||| ||||| Sbjct: 84402 tgatcttagaggtgtggaagcaagattcttgataatggaagcatacagatcaaaatcagc 84343 Query: 386 tttgtacttgcagcagctggcctcgatccactcctctgcaaggcttgttgatacattgtc 445 |||||||||||||||||| ||||| ||||||| ||||||||||||||| | || |||| Sbjct: 84342 tttgtacttgcagcagctagcctcaatccacttctctgcaaggcttgtggccacgctgtc 84283 Query: 446 ttggctgtccctctcatgttcttcaatcgctggccttatctcgtcgtacagg 497 ||| || ||||||||||| ||||| ||||| ||||||||||||||||||||| Sbjct: 84282 ttgactatccctctcatgctcttcgatcgccggccttatctcgtcgtacagg 84231 Score = 71.9 bits (36), Expect = 3e-09 Identities = 67/76 (88%), Gaps = 1/76 (1%) Strand = Plus / Minus Query: 566 ctgatgctaaccgggcacaaatatctgcaacattcaattgcttgcgcagaccacgtttag 625 ||||||||||||| |||| ||| | ||||||||| ||||||||||| ||||||||||| Sbjct: 84073 ctgatgctaaccgatcacagatacccacaacattcagttgcttgcgcataccacgtttag 84014 Query: 626 cttttgccaccacgaa 641 ||||| |||||||||| Sbjct: 84013 ctttt-ccaccacgaa 83999
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 151 bits (76), Expect = 3e-33 Identities = 193/232 (83%) Strand = Plus / Minus Query: 266 tcatggaccgttctgcaggtataacactccattttgttctctagggttcacatcttcttt 325 |||||||||||| | || ||| | || ||||||||| ||| ||||| | | |||||||| Sbjct: 21270988 tcatggaccgttttccaagtacatcaatccattttgctctgtaggggccgcgtcttcttt 21270929 Query: 326 tgctttcagaggcgtcgaagccaagttcttgataatcgcagcagataggtcaaactcagc 385 || | | ||||| || ||||| | ||||||||||| | |||| | || ||||| ||||| Sbjct: 21270928 tgatcttagaggtgtggaagcaagattcttgataatggaagcatacagatcaaaatcagc 21270869 Query: 386 tttgtacttgcagcagctggcctcgatccactcctctgcaaggcttgttgatacattgtc 445 |||||||||||||||||| ||||| ||||||| ||||||||||||||| | || |||| Sbjct: 21270868 tttgtacttgcagcagctagcctcaatccacttctctgcaaggcttgtggccacgctgtc 21270809 Query: 446 ttggctgtccctctcatgttcttcaatcgctggccttatctcgtcgtacagg 497 ||| || ||||||||||| ||||| ||||| ||||||||||||||||||||| Sbjct: 21270808 ttgactatccctctcatgctcttcgatcgccggccttatctcgtcgtacagg 21270757 Score = 71.9 bits (36), Expect = 3e-09 Identities = 67/76 (88%), Gaps = 1/76 (1%) Strand = Plus / Minus Query: 566 ctgatgctaaccgggcacaaatatctgcaacattcaattgcttgcgcagaccacgtttag 625 ||||||||||||| |||| ||| | ||||||||| ||||||||||| ||||||||||| Sbjct: 21270599 ctgatgctaaccgatcacagatacccacaacattcagttgcttgcgcataccacgtttag 21270540 Query: 626 cttttgccaccacgaa 641 ||||| |||||||||| Sbjct: 21270539 ctttt-ccaccacgaa 21270525
>gb|AY122273.1| Zea mays cultivar B73 SET domain-containing protein SET102 (SET102) mRNA, complete cds Length = 1792 Score = 145 bits (73), Expect = 2e-31 Identities = 133/153 (86%) Strand = Plus / Minus Query: 387 ttgtacttgcagcagctggcctcgatccactcctctgcaaggcttgttgatacattgtct 446 |||||||||| |||||| ||||||||||||| ||| || |||||||| || || | ||| Sbjct: 1536 ttgtacttgcggcagctagcctcgatccacttctccgcgaggcttgtggagacgctatct 1477 Query: 447 tggctgtccctctcatgttcttcaatcgctggccttatctcgtcgtacagggcatcgatt 506 |||||||||||||| || ||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 1476 tggctgtccctctcgtgctcttcaaccgcaggccttatctcgtcgtacagggcatcgatt 1417 Query: 507 tcggcagtcgcctgcttcttcacttcctcacag 539 || | | ||||| |||||||||||||||||| Sbjct: 1416 tcagaaacggcctggttcttcacttcctcacag 1384
>gb|AY106665.1| Zea mays PCO091068 mRNA sequence Length = 767 Score = 137 bits (69), Expect = 5e-29 Identities = 132/153 (86%) Strand = Plus / Minus Query: 387 ttgtacttgcagcagctggcctcgatccactcctctgcaaggcttgttgatacattgtct 446 |||||||||| |||||| ||||||||||||| ||| || |||||||| || || | ||| Sbjct: 482 ttgtacttgcggcagctagcctcgatccacttctccgcgaggcttgtggagacgctatct 423 Query: 447 tggctgtccctctcatgttcttcaatcgctggccttatctcgtcgtacagggcatcgatt 506 |||||||||||||| || ||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 422 tggctgtccctctcgtgctcttcaaccgcaggccttatctcgtcgtacagggcatcgatt 363 Query: 507 tcggcagtcgcctgcttcttcacttcctcacag 539 || | | || || |||||||||||||||||| Sbjct: 362 tcagaaacggcatggttcttcacttcctcacag 330
>gb|DQ469712.1| Hordeum vulgare subsp. vulgare serine/threonine kinase-like protein ABC1036 gene, complete cds Length = 29663 Score = 109 bits (55), Expect = 1e-20 Identities = 58/59 (98%) Strand = Plus / Plus Query: 20 tcgcgagatcttataggtttcacctctagcctaccccaacttgtttgggactaaaggct 78 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22798 tcgcgagatcttatgggtttcacctctagcctaccccaacttgtttgggactaaaggct 22856 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 22 gcgagatcttataggtttcacctctagcctaccccaacttgtttgg 67 ||||||| |||| ||||||| ||||||||||| ||||||| ||||| Sbjct: 24462 gcgagattttatgggtttcagctctagcctactccaacttatttgg 24507
>gb|AY013753.1| Aegilops tauschii glutathione-S-transferase 2 and glutathione S-transferase 1 genes, complete cds Length = 13710 Score = 109 bits (55), Expect = 1e-20 Identities = 61/63 (96%) Strand = Plus / Minus Query: 16 ttgatcgcgagatcttataggtttcacctctagcctaccccaacttgtttgggactaaag 75 ||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 13122 ttgattgcgagatcttatgggtttcacctctagcctaccccaacttgtttgggactaaag 13063 Query: 76 gct 78 ||| Sbjct: 13062 gct 13060
>gb|DQ335573.1| Elymus hystrix plastid acetyl-CoA carboxylase pla2 gene, partial cds; nuclear gene for plastid product Length = 1609 Score = 109 bits (55), Expect = 1e-20 Identities = 58/59 (98%) Strand = Plus / Plus Query: 20 tcgcgagatcttataggtttcacctctagcctaccccaacttgtttgggactaaaggct 78 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 835 tcgcgagatcttatgggtttcacctctagcctaccccaacttgtttgggactaaaggct 893
>gb|AF091802.1|AF091802 Aegilops tauschii starch synthase I gene, complete cds Length = 11387 Score = 109 bits (55), Expect = 1e-20 Identities = 61/63 (96%) Strand = Plus / Plus Query: 16 ttgatcgcgagatcttataggtttcacctctagcctaccccaacttgtttgggactaaag 75 |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 9455 ttgatcacgagatcttatgggtttcacctctagcctaccccaacttgtttgggactaaag 9514 Query: 76 gct 78 ||| Sbjct: 9515 gct 9517
>gb|DQ146421.1| Triticum monococcum strain PI503874 VRN1 (VRN1) gene, complete cds Length = 16224 Score = 105 bits (53), Expect = 2e-19 Identities = 56/57 (98%) Strand = Plus / Plus Query: 22 gcgagatcttataggtttcacctctagcctaccccaacttgtttgggactaaaggct 78 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14136 gcgagatcttatgggtttcacctctagcctaccccaacttgtttgggactaaaggct 14192 Score = 54.0 bits (27), Expect = 6e-04 Identities = 49/55 (89%), Gaps = 1/55 (1%) Strand = Plus / Plus Query: 24 gagatcttataggtttcacctctagcctaccccaacttgtttgggactaaaggct 78 |||||||||| | ||||| ||||| ||||||| ||||| |||||||||||||||| Sbjct: 9958 gagatcttatggatttcagctctaccctaccc-aacttatttgggactaaaggct 10011
>gb|DQ146422.1| Triticum monococcum strain PI326317 VRN1 (VRN1) gene, complete cds Length = 15688 Score = 105 bits (53), Expect = 2e-19 Identities = 56/57 (98%) Strand = Plus / Plus Query: 22 gcgagatcttataggtttcacctctagcctaccccaacttgtttgggactaaaggct 78 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13600 gcgagatcttatgggtttcacctctagcctaccccaacttgtttgggactaaaggct 13656 Score = 54.0 bits (27), Expect = 6e-04 Identities = 49/55 (89%), Gaps = 1/55 (1%) Strand = Plus / Plus Query: 24 gagatcttataggtttcacctctagcctaccccaacttgtttgggactaaaggct 78 |||||||||| | ||||| ||||| ||||||| ||||| |||||||||||||||| Sbjct: 9422 gagatcttatggatttcagctctaccctaccc-aacttatttgggactaaaggct 9475
>gb|DQ146423.1| Triticum monococcum strain PI306540 VRN1 (VRN1) gene, complete cds Length = 16209 Score = 105 bits (53), Expect = 2e-19 Identities = 56/57 (98%) Strand = Plus / Plus Query: 22 gcgagatcttataggtttcacctctagcctaccccaacttgtttgggactaaaggct 78 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14121 gcgagatcttatgggtttcacctctagcctaccccaacttgtttgggactaaaggct 14177 Score = 54.0 bits (27), Expect = 6e-04 Identities = 49/55 (89%), Gaps = 1/55 (1%) Strand = Plus / Plus Query: 24 gagatcttataggtttcacctctagcctaccccaacttgtttgggactaaaggct 78 |||||||||| | ||||| ||||| ||||||| ||||| |||||||||||||||| Sbjct: 9943 gagatcttatggatttcagctctaccctaccc-aacttatttgggactaaaggct 9996
>gb|AY188331.1| Triticum monococcum DV92 chromosome 5AL BAC 231A16, complete sequence Length = 133625 Score = 105 bits (53), Expect = 2e-19 Identities = 56/57 (98%) Strand = Plus / Plus Query: 22 gcgagatcttataggtttcacctctagcctaccccaacttgtttgggactaaaggct 78 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 80672 gcgagatcttatgggtttcacctctagcctaccccaacttgtttgggactaaaggct 80728 Score = 54.0 bits (27), Expect = 6e-04 Identities = 49/55 (89%), Gaps = 1/55 (1%) Strand = Plus / Plus Query: 24 gagatcttataggtttcacctctagcctaccccaacttgtttgggactaaaggct 78 |||||||||| | ||||| ||||| ||||||| ||||| |||||||||||||||| Sbjct: 76494 gagatcttatggatttcagctctaccctaccc-aacttatttgggactaaaggct 76547
>gb|AY747601.1| Triticum aestivum cultivar Triple Dirk D line VRN-A1 (VRN-A1) gene, complete cds; and Stowaway MITE and gypsy retrotransposon Sukkula, complete sequence Length = 12464 Score = 105 bits (53), Expect = 2e-19 Identities = 56/57 (98%) Strand = Plus / Plus Query: 22 gcgagatcttataggtttcacctctagcctaccccaacttgtttgggactaaaggct 78 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10788 gcgagatcttatgggtttcacctctagcctaccccaacttgtttgggactaaaggct 10844
>gb|AY747600.1| Triticum aestivum cultivar Triple Dirk C line VRN-A1 (VRN-A1) gene, complete cds; and Stowaway MITE and gypsy retrotransposon Sukkula, complete sequence Length = 12233 Score = 105 bits (53), Expect = 2e-19 Identities = 56/57 (98%) Strand = Plus / Plus Query: 22 gcgagatcttataggtttcacctctagcctaccccaacttgtttgggactaaaggct 78 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10557 gcgagatcttatgggtttcacctctagcctaccccaacttgtttgggactaaaggct 10613
>gb|AY747599.1| Triticum aestivum cultivar IL369 line VRN-A1 (VRN-A1) gene, complete cds; and gypsy retrotransposon Sukkula, complete sequence Length = 6730 Score = 105 bits (53), Expect = 2e-19 Identities = 56/57 (98%) Strand = Plus / Plus Query: 22 gcgagatcttataggtttcacctctagcctaccccaacttgtttgggactaaaggct 78 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5052 gcgagatcttatgggtttcacctctagcctaccccaacttgtttgggactaaaggct 5108
>gb|AY747598.1| Triticum turgidum cultivar Langdon clone BAC 1256C17 VRN-A1 (VRN-A1) gene, complete cds Length = 5065 Score = 105 bits (53), Expect = 2e-19 Identities = 56/57 (98%) Strand = Plus / Plus Query: 22 gcgagatcttataggtttcacctctagcctaccccaacttgtttgggactaaaggct 78 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3387 gcgagatcttatgggtttcacctctagcctaccccaacttgtttgggactaaaggct 3443
>gb|AY639700.1| Aegilops tauschii cultivar KU2156 FtsH-like protein gene, partial cds Length = 678 Score = 93.7 bits (47), Expect = 7e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 20 tcgcgagatcttataggtttcacctctagcctaccccaacttgtttgggactaaaggct 78 |||||||||||||| | ||||||||||||||||||||||||||||||||| |||||||| Sbjct: 415 tcgcgagatcttatggatttcacctctagcctaccccaacttgtttgggattaaaggct 473
>gb|AY639698.1| Aegilops tauschii cultivar KU2146 FtsH-like protein gene, partial cds Length = 679 Score = 93.7 bits (47), Expect = 7e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 20 tcgcgagatcttataggtttcacctctagcctaccccaacttgtttgggactaaaggct 78 |||||||||||||| | ||||||||||||||||||||||||||||||||| |||||||| Sbjct: 413 tcgcgagatcttatggatttcacctctagcctaccccaacttgtttgggattaaaggct 471
>gb|AY639697.1| Aegilops tauschii cultivar KU2030 FtsH-like protein gene, partial cds Length = 676 Score = 93.7 bits (47), Expect = 7e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 20 tcgcgagatcttataggtttcacctctagcctaccccaacttgtttgggactaaaggct 78 |||||||||||||| | ||||||||||||||||||||||||||||||||| |||||||| Sbjct: 410 tcgcgagatcttatggatttcacctctagcctaccccaacttgtttgggattaaaggct 468
>gb|AY639696.1| Aegilops tauschii cultivar KU2065 FtsH-like protein gene, partial cds Length = 682 Score = 93.7 bits (47), Expect = 7e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 20 tcgcgagatcttataggtttcacctctagcctaccccaacttgtttgggactaaaggct 78 |||||||||||||| | ||||||||||||||||||||||||||||||||| |||||||| Sbjct: 413 tcgcgagatcttatggatttcacctctagcctaccccaacttgtttgggattaaaggct 471
>gb|AY639695.1| Aegilops tauschii cultivar KU2801 FtsH-like protein gene, partial cds Length = 680 Score = 93.7 bits (47), Expect = 7e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 20 tcgcgagatcttataggtttcacctctagcctaccccaacttgtttgggactaaaggct 78 |||||||||||||| | ||||||||||||||||||||||||||||||||| |||||||| Sbjct: 414 tcgcgagatcttatggatttcacctctagcctaccccaacttgtttgggattaaaggct 472
>gb|DQ125942.1| Hordeum vulgare chloroplast Mg-chelatase subunit XANTHA-G precursor, gene, complete cds; nuclear gene for chloroplast product Length = 7993 Score = 87.7 bits (44), Expect = 4e-14 Identities = 44/44 (100%) Strand = Plus / Plus Query: 35 ggtttcacctctagcctaccccaacttgtttgggactaaaggct 78 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5005 ggtttcacctctagcctaccccaacttgtttgggactaaaggct 5048
>gb|AF064563.1|AF064563 Hordeum vulgare cultivar Bomi starch branching enzyme IIb (sbeIIb) gene, nuclear gene encoding plastid protein, partial cds Length = 3960 Score = 87.7 bits (44), Expect = 4e-14 Identities = 63/68 (92%), Gaps = 1/68 (1%) Strand = Plus / Minus Query: 12 tgaattgatcgcgagatcttataggtttcacctctagcctaccccaacttgtttggg-ac 70 ||||| |||||||||||||||| ||||||||| ||||||||||||||||||||||| || Sbjct: 1264 tgaatcgatcgcgagatcttatgagtttcacctttagcctaccccaacttgtttgggaac 1205 Query: 71 taaaggct 78 |||||||| Sbjct: 1204 taaaggct 1197
>gb|AY639699.1| Aegilops tauschii cultivar KU2160 FtsH-like protein gene, partial cds Length = 678 Score = 85.7 bits (43), Expect = 2e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 20 tcgcgagatcttataggtttcacctctagcctaccccaacttgtttgggactaaaggct 78 |||||||||||||| | ||||||||||||||| ||||||||||||||||| |||||||| Sbjct: 415 tcgcgagatcttatggatttcacctctagcctgccccaacttgtttgggattaaaggct 473
>emb|AJ001317.1|HVHOTR1 Hordeum vulgare Hotr1 gene Length = 9665 Score = 85.7 bits (43), Expect = 2e-13 Identities = 56/59 (94%), Gaps = 1/59 (1%) Strand = Plus / Minus Query: 20 tcgcgagatcttataggtttcacctctagcctaccccaacttgtttgggactaaaggct 78 |||| ||||||||| |||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 4503 tcgctagatcttatgggtttcacctctagccta-cccaacttgtttgggactaaaggct 4446
>gb|AF521177.1| Hordeum vulgare contig 211252, complete sequence Length = 211664 Score = 71.9 bits (36), Expect = 3e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 23 cgagatcttataggtttcacctctagcctaccccaacttgtttgggactaaaggct 78 ||||||||||| | ||||| |||||||||||||||||||| || |||||||||||| Sbjct: 79841 cgagatcttatggatttcagctctagcctaccccaacttgattcggactaaaggct 79786
>ref|NM_202429.1| Arabidopsis thaliana unknown protein AT1G76710 transcript variant AT1G76710.2 mRNA, complete cds Length = 1847 Score = 69.9 bits (35), Expect = 1e-08 Identities = 59/67 (88%) Strand = Plus / Minus Query: 429 cttgttgatacattgtcttggctgtccctctcatgttcttcaatcgctggccttatctcg 488 ||||||| |||| |||||||||| || || ||||| || |||||||| |||||||||||| Sbjct: 1517 cttgttgctacactgtcttggctatctctttcatgctcctcaatcgccggccttatctcg 1458 Query: 489 tcgtaca 495 ||||||| Sbjct: 1457 tcgtaca 1451
>ref|NM_106321.3| Arabidopsis thaliana unknown protein AT1G76710 transcript variant AT1G76710.1 mRNA, complete cds Length = 1751 Score = 69.9 bits (35), Expect = 1e-08 Identities = 59/67 (88%) Strand = Plus / Minus Query: 429 cttgttgatacattgtcttggctgtccctctcatgttcttcaatcgctggccttatctcg 488 ||||||| |||| |||||||||| || || ||||| || |||||||| |||||||||||| Sbjct: 1421 cttgttgctacactgtcttggctatctctttcatgctcctcaatcgccggccttatctcg 1362 Query: 489 tcgtaca 495 ||||||| Sbjct: 1361 tcgtaca 1355
>gb|AY063813.1| Arabidopsis thaliana At1g76710 mRNA sequence Length = 1776 Score = 69.9 bits (35), Expect = 1e-08 Identities = 59/67 (88%) Strand = Plus / Minus Query: 429 cttgttgatacattgtcttggctgtccctctcatgttcttcaatcgctggccttatctcg 488 ||||||| |||| |||||||||| || || ||||| || |||||||| |||||||||||| Sbjct: 1420 cttgttgctacactgtcttggctatctctttcatgctcctcaatcgccggccttatctcg 1361 Query: 489 tcgtaca 495 ||||||| Sbjct: 1360 tcgtaca 1354
>emb|BX816390.1|CNS0AEGK Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH45ZB12 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1615 Score = 69.9 bits (35), Expect = 1e-08 Identities = 59/67 (88%) Strand = Plus / Minus Query: 429 cttgttgatacattgtcttggctgtccctctcatgttcttcaatcgctggccttatctcg 488 ||||||| |||| |||||||||| || || ||||| || |||||||| |||||||||||| Sbjct: 1325 cttgttgctacactgtcttggctatctctttcatgctcctcaatcgccggccttatctcg 1266 Query: 489 tcgtaca 495 ||||||| Sbjct: 1265 tcgtaca 1259
>emb|BX816503.1|CNS0AE45 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH52ZD08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1809 Score = 69.9 bits (35), Expect = 1e-08 Identities = 59/67 (88%) Strand = Plus / Minus Query: 429 cttgttgatacattgtcttggctgtccctctcatgttcttcaatcgctggccttatctcg 488 ||||||| |||| |||||||||| || || ||||| || |||||||| |||||||||||| Sbjct: 1518 cttgttgctacactgtcttggctatctctttcatgctcctcaatcgccggccttatctcg 1459 Query: 489 tcgtaca 495 ||||||| Sbjct: 1458 tcgtaca 1452
>gb|AC010718.5|AC010718 Arabidopsis thaliana chromosome 1 BAC F28O16 genomic sequence, complete sequence Length = 87684 Score = 69.9 bits (35), Expect = 1e-08 Identities = 59/67 (88%) Strand = Plus / Plus Query: 429 cttgttgatacattgtcttggctgtccctctcatgttcttcaatcgctggccttatctcg 488 ||||||| |||| |||||||||| || || ||||| || |||||||| |||||||||||| Sbjct: 26831 cttgttgctacactgtcttggctatctctttcatgctcctcaatcgccggccttatctcg 26890 Query: 489 tcgtaca 495 ||||||| Sbjct: 26891 tcgtaca 26897
>gb|BT001913.1| Arabidopsis thaliana clone C105110 unknown protein (At1g76710) mRNA, complete cds Length = 1510 Score = 69.9 bits (35), Expect = 1e-08 Identities = 59/67 (88%) Strand = Plus / Minus Query: 429 cttgttgatacattgtcttggctgtccctctcatgttcttcaatcgctggccttatctcg 488 ||||||| |||| |||||||||| || || ||||| || |||||||| |||||||||||| Sbjct: 1307 cttgttgctacactgtcttggctatctctttcatgctcctcaatcgccggccttatctcg 1248 Query: 489 tcgtaca 495 ||||||| Sbjct: 1247 tcgtaca 1241
>dbj|AB108271.1| Phleum pratense DNA, SSR, microsatellite A16-D04 Length = 585 Score = 65.9 bits (33), Expect = 2e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 23 cgagatcttataggtttcacctctagcctaccccaacttgtttgggact 71 ||||||||||| |||||| ||||||| ||||||||||||||||||||| Sbjct: 360 cgagatcttatgagtttcaactctagcgtaccccaacttgtttgggact 312
>gb|AY781893.1| Saccharum hybrid cultivar isolate 32a2pro ribosomal protein S27 genes, partial cds Length = 1945 Score = 63.9 bits (32), Expect = 6e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 35 ggtttcacctctagcctaccccaacttgtttgggactaaaggct 78 ||||||| |||||||||||||||||||| ||||||| ||||||| Sbjct: 1060 ggtttcatctctagcctaccccaacttgcttgggacaaaaggct 1017
>gb|AC165174.2| Zea mays clone ZMMBBb-127F19, complete sequence Length = 187659 Score = 63.9 bits (32), Expect = 6e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 35 ggtttcacctctagcctaccccaacttgtttgggactaaa 74 ||||||| |||||||||||||||||||| ||||||||||| Sbjct: 65857 ggtttcaactctagcctaccccaacttgcttgggactaaa 65818
>gb|AC165175.2| Zea mays clone ZMMBBb-136N21, complete sequence Length = 129274 Score = 63.9 bits (32), Expect = 6e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 35 ggtttcacctctagcctaccccaacttgtttgggactaaa 74 ||||||| |||||||||||||||||||| ||||||||||| Sbjct: 69295 ggtttcaactctagcctaccccaacttgcttgggactaaa 69256 Score = 48.1 bits (24), Expect = 0.037 Identities = 33/36 (91%) Strand = Plus / Plus Query: 35 ggtttcacctctagcctaccccaacttgtttgggac 70 ||||||| ||||||||||||||||| || ||||||| Sbjct: 119084 ggtttcatctctagcctaccccaacgtgcttgggac 119119 Score = 48.1 bits (24), Expect = 0.037 Identities = 30/32 (93%) Strand = Plus / Minus Query: 43 ctctagcctaccccaacttgtttgggactaaa 74 ||||||||||||||||||| ||||||||||| Sbjct: 93044 ctctagcctaccccaactttcttgggactaaa 93013
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 63.9 bits (32), Expect = 6e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 37 tttcacctctagcctaccccaacttgtttgggactaaagg 76 ||||| |||||||||||||||||||||||| ||||||||| Sbjct: 2083303 tttcatctctagcctaccccaacttgtttgagactaaagg 2083264 Score = 44.1 bits (22), Expect = 0.58 Identities = 28/30 (93%) Strand = Plus / Plus Query: 46 tagcctaccccaacttgtttgggactaaag 75 ||||||||||||||||| ||||| |||||| Sbjct: 74611 tagcctaccccaacttggttgggcctaaag 74640
>dbj|AP003896.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1613_G04 Length = 135357 Score = 63.9 bits (32), Expect = 6e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 37 tttcacctctagcctaccccaacttgtttgggactaaagg 76 ||||| |||||||||||||||||||||||| ||||||||| Sbjct: 76833 tttcatctctagcctaccccaacttgtttgagactaaagg 76794
>gb|AY634681.1| Hordeum vulgare ADP-glucose pyrophosphorylase small subunit gene, complete cds, alternatively spliced Length = 9669 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 37 tttcacctctagcctaccccaacttgtttgggact 71 ||||| ||||||||||||||||||||||||||||| Sbjct: 8752 tttcaactctagcctaccccaacttgtttgggact 8786
>gb|AF023160.1|AF023160 Zea mays starch synthase DULL1 (dull1) gene, partial cds Length = 1856 Score = 60.0 bits (30), Expect = 1e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 37 tttcacctctagcctaccccaacttgtttgggactaaa 74 ||||| |||||| ||||||||||||||||||||||||| Sbjct: 139 tttcaactctagtctaccccaacttgtttgggactaaa 176
>gb|AC099404.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0019D02, complete sequence Length = 154692 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 43 ctctagcctaccccaacttgtttgggactaaa 74 ||||||| |||||||||||||||||||||||| Sbjct: 124889 ctctagcttaccccaacttgtttgggactaaa 124920
>gb|BT018999.1| Zea mays clone Contig487.F mRNA sequence Length = 1246 Score = 56.0 bits (28), Expect = 2e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 35 ggtttcacctctagcctaccccaacttgtttgggactaaa 74 ||||||| ||||||||||| |||||||| ||||||||||| Sbjct: 111 ggtttcaactctagcctactccaacttgcttgggactaaa 150
>gb|AC108763.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBb0004A05, complete sequence Length = 157913 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 43 ctctagcctaccccaacttgtttgggactaaa 74 ||||||| |||||||||||||||||||||||| Sbjct: 9563 ctctagcttaccccaacttgtttgggactaaa 9594
>gb|AY649842.1| Zea mays ASF/SF2-like pre-mRNA splicing factor SRP30 (srp30) gene, complete cds, alternatively spliced Length = 21267 Score = 56.0 bits (28), Expect = 2e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 35 ggtttcacctctagcctaccccaacttgtttgggactaaa 74 ||||||| || ||||||||||||||||| ||||||||||| Sbjct: 11058 ggtttcaactttagcctaccccaacttgcttgggactaaa 11097
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 43 ctctagcctaccccaacttgtttgggactaaa 74 ||||||| |||||||||||||||||||||||| Sbjct: 19079603 ctctagcttaccccaacttgtttgggactaaa 19079634 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Minus Query: 36 gtttcacctctagcctaccccaacttgtttgggactaaagg 76 |||||| |||||||||||||||||||| ||| |||||||| Sbjct: 7862376 gtttcatctctagcctaccccaacttgcctggaactaaagg 7862336
>gb|AF100768.1|AF100768 Zea mays ZM2LRK pseudogene sequence Length = 2700 Score = 56.0 bits (28), Expect = 2e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 35 ggtttcacctctagcctaccccaacttgtttgggactaaa 74 ||||||| ||||||||||||| |||||| ||||||||||| Sbjct: 2313 ggtttcaactctagcctaccctaacttgcttgggactaaa 2352
>emb|AJ293564.1|SHY293564 Saccharum hybrid cultivar microsatellite DNA, clone mSSCIR78 Length = 862 Score = 56.0 bits (28), Expect = 2e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 35 ggtttcacctctagcctaccccaacttgtttgggactaaaggct 78 ||||||| |||||||||||||||||||| | ||||| ||||||| Sbjct: 698 ggtttcatctctagcctaccccaacttgctcgggacaaaaggct 741
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 44 tctagcctaccccaacttgtttgggactaaaggct 78 ||||||||||||||| ||| ||||||||||||||| Sbjct: 26974234 tctagcctaccccaaattgcttgggactaaaggct 26974268 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 50 ctaccccaacttgtttgggactaaaggct 78 ||||||||||||| ||||||||||||||| Sbjct: 52814 ctaccccaacttgcttgggactaaaggct 52842
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 44 tctagcctaccccaacttgtttgggactaaaggct 78 ||||||||||||||| ||| ||||||||||||||| Sbjct: 27065557 tctagcctaccccaaattgcttgggactaaaggct 27065591 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 50 ctaccccaacttgtttgggactaaaggct 78 ||||||||||||| ||||||||||||||| Sbjct: 52814 ctaccccaacttgcttgggactaaaggct 52842
>gb|AC087851.4|AC087851 Oryza sativa chromosome 3 BAC OSJNBb0072E24 genomic sequence, complete sequence Length = 111882 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 44 tctagcctaccccaacttgtttgggactaaaggct 78 ||||||||||||||| ||| ||||||||||||||| Sbjct: 85165 tctagcctaccccaaattgcttgggactaaaggct 85131
>dbj|AK107672.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-131-H10, full insert sequence Length = 1562 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 44 tctagcctaccccaacttgtttgggactaaaggct 78 ||||||||||||||| ||| ||||||||||||||| Sbjct: 1528 tctagcctaccccaaattgcttgggactaaaggct 1494
>emb|AJ841697.1| Poa pratensis serk2 gene for somatic embryogenesis receptor-like kinase 2, exons 1-11, allele 1 Length = 5290 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 36 gtttcacctctagcctaccccaacttgtttggga 69 |||||| |||||||||||||||||||| |||||| Sbjct: 1192 gtttcatctctagcctaccccaacttgcttggga 1225
>dbj|AK123523.1| Homo sapiens cDNA FLJ41529 fis, clone BRTHA2014792, weakly similar to ENHANCER OF ZESTE Length = 1800 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 435 gatacattgtcttggctgtccctctcatgttcttcaat 472 |||||| |||||||||| |||||||| ||||||||||| Sbjct: 1491 gatacactgtcttggctatccctctcgtgttcttcaat 1454
>gb|AY466100.1| Sorghum propinquum phytochrome B (PHYB) gene, complete cds Length = 7269 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 46 tagcctaccccaacttgtttgggactaaa 74 ||||||||||||||||| ||||||||||| Sbjct: 5874 tagcctaccccaacttgcttgggactaaa 5846
>gb|AY466099.1| Sorghum x drummondii voucher PI302233 phytochrome B (PHYB) gene, complete cds Length = 7271 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 46 tagcctaccccaacttgtttgggactaaa 74 ||||||||||||||||| ||||||||||| Sbjct: 5872 tagcctaccccaacttgcttgggactaaa 5844
>gb|AY466098.1| Sorghum arundinaceum voucher PI302233 phytochrome B (PHYB) gene, complete cds Length = 7242 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 46 tagcctaccccaacttgtttgggactaaa 74 ||||||||||||||||| ||||||||||| Sbjct: 5886 tagcctaccccaacttgcttgggactaaa 5858
>gb|AY466097.1| Sorghum arundinaceum voucher PI225905 phytochrome B (PHYB) gene, complete cds Length = 7285 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 46 tagcctaccccaacttgtttgggactaaa 74 ||||||||||||||||| ||||||||||| Sbjct: 5886 tagcctaccccaacttgcttgggactaaa 5858
>gb|AY466096.1| Sorghum arundinaceum voucher IS14485 phytochrome B (PHYB) gene, complete cds Length = 7284 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 46 tagcctaccccaacttgtttgggactaaa 74 ||||||||||||||||| ||||||||||| Sbjct: 5886 tagcctaccccaacttgcttgggactaaa 5858
>gb|AY466095.1| Sorghum arundinaceum voucher PI302105 phytochrome B (PHYB) gene, complete cds Length = 7284 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 46 tagcctaccccaacttgtttgggactaaa 74 ||||||||||||||||| ||||||||||| Sbjct: 5886 tagcctaccccaacttgcttgggactaaa 5858
>gb|AY466094.1| Sorghum arundinaceum voucher IS14567 phytochrome B (PHYB) gene, complete cds Length = 7284 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 46 tagcctaccccaacttgtttgggactaaa 74 ||||||||||||||||| ||||||||||| Sbjct: 5886 tagcctaccccaacttgcttgggactaaa 5858
>gb|AY466093.1| Sorghum arundinaceum voucher IS14503 phytochrome B (PHYB) gene, complete cds Length = 7283 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 46 tagcctaccccaacttgtttgggactaaa 74 ||||||||||||||||| ||||||||||| Sbjct: 5885 tagcctaccccaacttgcttgggactaaa 5857
>gb|AY466092.1| Sorghum arundinaceum voucher PI213900 phytochrome B (PHYB) gene, complete cds Length = 7283 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 46 tagcctaccccaacttgtttgggactaaa 74 ||||||||||||||||| ||||||||||| Sbjct: 5885 tagcctaccccaacttgcttgggactaaa 5857
>gb|AY466091.1| Sorghum arundinaceum voucher IS14569 phytochrome B (PHYB) gene, complete cds Length = 7283 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 46 tagcctaccccaacttgtttgggactaaa 74 ||||||||||||||||| ||||||||||| Sbjct: 5885 tagcctaccccaacttgcttgggactaaa 5857
>gb|AY466090.1| Sorghum bicolor phytochrome B (PHYB) gene, complete cds Length = 7285 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 46 tagcctaccccaacttgtttgggactaaa 74 ||||||||||||||||| ||||||||||| Sbjct: 5886 tagcctaccccaacttgcttgggactaaa 5858
>gb|AY466089.1| Sorghum bicolor isolate PHYB-Rtx430 phytochrome B (PHYB) gene, complete cds Length = 7285 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 46 tagcctaccccaacttgtttgggactaaa 74 ||||||||||||||||| ||||||||||| Sbjct: 5886 tagcctaccccaacttgcttgggactaaa 5858
>gb|AY466088.1| Sorghum bicolor voucher NSL83707 phytochrome B (PHYB) gene, complete cds Length = 7285 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 46 tagcctaccccaacttgtttgggactaaa 74 ||||||||||||||||| ||||||||||| Sbjct: 5886 tagcctaccccaacttgcttgggactaaa 5858
>gb|AY466087.1| Sorghum bicolor voucher PI152593 phytochrome B (PHYB) gene, complete cds Length = 7285 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 46 tagcctaccccaacttgtttgggactaaa 74 ||||||||||||||||| ||||||||||| Sbjct: 5886 tagcctaccccaacttgcttgggactaaa 5858
>gb|AY466086.1| Sorghum bicolor voucher PI229835 phytochrome B (PHYB) gene, complete cds Length = 7285 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 46 tagcctaccccaacttgtttgggactaaa 74 ||||||||||||||||| ||||||||||| Sbjct: 5886 tagcctaccccaacttgcttgggactaaa 5858
>gb|AY466085.1| Sorghum bicolor voucher PI153800 phytochrome B (PHYB) gene, complete cds Length = 7285 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 46 tagcctaccccaacttgtttgggactaaa 74 ||||||||||||||||| ||||||||||| Sbjct: 5886 tagcctaccccaacttgcttgggactaaa 5858
>gb|AY466084.1| Sorghum bicolor voucher PI267380 phytochrome B (PHYB) gene, complete cds Length = 7284 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 46 tagcctaccccaacttgtttgggactaaa 74 ||||||||||||||||| ||||||||||| Sbjct: 5885 tagcctaccccaacttgcttgggactaaa 5857
>gb|AC097627.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0079B22, from chromosome 3, complete sequence Length = 125217 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 50 ctaccccaacttgtttgggactaaaggct 78 ||||||||||||| ||||||||||||||| Sbjct: 72404 ctaccccaacttgcttgggactaaaggct 72376
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 43 ctctagcctaccccaacttgtttgg 67 ||||||||||||||||||||||||| Sbjct: 3230952 ctctagcctaccccaacttgtttgg 3230928 Score = 40.1 bits (20), Expect = 9.1 Identities = 35/40 (87%) Strand = Plus / Minus Query: 37 tttcacctctagcctaccccaacttgtttgggactaaagg 76 ||||| |||||||||||| ||||||| | |||||| |||| Sbjct: 29113662 tttcatctctagcctacctcaacttgctagggacttaagg 29113623
>dbj|AP005912.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0064I23 Length = 161865 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Minus Query: 36 gtttcacctctagcctaccccaacttgtttgggactaaagg 76 |||||| |||||||||||||||||||| ||| |||||||| Sbjct: 109579 gtttcatctctagcctaccccaacttgcctggaactaaagg 109539
>dbj|AP004843.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1103G11 Length = 182931 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 43 ctctagcctaccccaacttgtttgg 67 ||||||||||||||||||||||||| Sbjct: 103139 ctctagcctaccccaacttgtttgg 103115
>gb|AF182394.1|AF182394 Sorghum bicolor phytochrome B (PHYB) gene, complete cds Length = 8786 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 46 tagcctaccccaacttgtttgggactaaa 74 ||||||||||||||||| ||||||||||| Sbjct: 6314 tagcctaccccaacttgcttgggactaaa 6286
>gb|AF528565.1| Zea mays cultivar BSSS53 chromosome 4 clone BAC 072, complete sequence Length = 106246 Score = 48.1 bits (24), Expect = 0.037 Identities = 33/36 (91%) Strand = Plus / Plus Query: 35 ggtttcacctctagcctaccccaacttgtttgggac 70 ||||||| ||||||||||||||||| || ||||||| Sbjct: 13331 ggtttcatctctagcctaccccaacgtgcttgggac 13366
>gb|AC128706.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0063F24, complete sequence Length = 152738 Score = 48.1 bits (24), Expect = 0.037 Identities = 33/36 (91%) Strand = Plus / Minus Query: 35 ggtttcacctctagcctaccccaacttgtttgggac 70 ||||||| |||||||||||| |||||||||||||| Sbjct: 62360 ggtttcatctctagcctaccaaaacttgtttgggac 62325
>gb|AY491681.1| Triticum monococcum DV92 BAC 109N23, complete sequence Length = 101101 Score = 48.1 bits (24), Expect = 0.037 Identities = 33/36 (91%) Strand = Plus / Minus Query: 43 ctctagcctaccccaacttgtttgggactaaaggct 78 ||||||||||| ||||||| ||| |||||||||||| Sbjct: 13342 ctctagcctactccaacttatttcggactaaaggct 13307
>gb|AC165177.2| Zea mays clone ZMMBBb-188L18, complete sequence Length = 137852 Score = 48.1 bits (24), Expect = 0.037 Identities = 36/40 (90%) Strand = Plus / Minus Query: 35 ggtttcacctctagcctaccccaacttgtttgggactaaa 74 ||||||| ||||||| |||| ||||||| ||||||||||| Sbjct: 18961 ggtttcaactctagcgtaccacaacttgcttgggactaaa 18922
>gb|AY530729.1| Zea mays Tha8 (tha8) gene, complete cds Length = 5140 Score = 48.1 bits (24), Expect = 0.037 Identities = 33/36 (91%) Strand = Plus / Minus Query: 35 ggtttcacctctagcctaccccaacttgtttgggac 70 ||||||| ||||||||||||||||| || ||||||| Sbjct: 2573 ggtttcatctctagcctaccccaacgtgcttgggac 2538
>gb|AF448416.1| Zea mays B73 chromosome 9S bz genomic region Length = 106186 Score = 48.1 bits (24), Expect = 0.037 Identities = 33/36 (91%) Strand = Plus / Plus Query: 35 ggtttcacctctagcctaccccaacttgtttgggac 70 ||||||| ||||||||||||||||| || ||||||| Sbjct: 98485 ggtttcatctctagcctaccccaacgtgcttgggac 98520
>gb|AC165267.2| Zea mays clone ZMMBBb-151F20, complete sequence Length = 115478 Score = 48.1 bits (24), Expect = 0.037 Identities = 36/40 (90%) Strand = Plus / Plus Query: 35 ggtttcacctctagcctaccccaacttgtttgggactaaa 74 ||||||| ||||||| |||| ||||||| ||||||||||| Sbjct: 6839 ggtttcaactctagcgtaccacaacttgcttgggactaaa 6878
>gb|AF090447.2| Zea mays 22 kDa alpha zein gene cluster, complete sequence Length = 346296 Score = 48.1 bits (24), Expect = 0.037 Identities = 33/36 (91%) Strand = Plus / Plus Query: 35 ggtttcacctctagcctaccccaacttgtttgggac 70 ||||||| ||||||||||||||||| || ||||||| Sbjct: 342168 ggtttcatctctagcctaccccaacgtgcttgggac 342203
>gb|AY747606.1| Triticum aestivum cultivar Triple Dirk C line VRN-D1 (VRN-D1) gene, complete cds Length = 12335 Score = 48.1 bits (24), Expect = 0.037 Identities = 40/44 (90%), Gaps = 1/44 (2%) Strand = Plus / Plus Query: 35 ggtttcacctctagcctaccccaacttgtttgggactaaaggct 78 ||||||| ||||| ||||||| ||||| |||||||||||||||| Sbjct: 6664 ggtttcagctctaccctaccc-aacttatttgggactaaaggct 6706
>gb|AY747605.1| Aegilops tauschii BAC 22J2 VRN-D1 (VRN-D1) gene, complete cds Length = 12224 Score = 48.1 bits (24), Expect = 0.037 Identities = 40/44 (90%), Gaps = 1/44 (2%) Strand = Plus / Plus Query: 35 ggtttcacctctagcctaccccaacttgtttgggactaaaggct 78 ||||||| ||||| ||||||| ||||| |||||||||||||||| Sbjct: 6662 ggtttcagctctaccctaccc-aacttatttgggactaaaggct 6704
>gb|AY747597.1| Triticum aestivum cultivar Triple Dirk E line VRN-D1 (VRN-D1) gene, complete cds Length = 8100 Score = 48.1 bits (24), Expect = 0.037 Identities = 40/44 (90%), Gaps = 1/44 (2%) Strand = Plus / Plus Query: 35 ggtttcacctctagcctaccccaacttgtttgggactaaaggct 78 ||||||| ||||| ||||||| ||||| |||||||||||||||| Sbjct: 2429 ggtttcagctctaccctaccc-aacttatttgggactaaaggct 2471
>gb|AF123535.1| Zea mays alcohol dehydrogenase 1 (adh1) gene, adh1-F allele, complete cds Length = 160480 Score = 48.1 bits (24), Expect = 0.037 Identities = 36/40 (90%) Strand = Plus / Plus Query: 35 ggtttcacctctagcctaccccaacttgtttgggactaaa 74 ||||||| ||||||||||||| | |||| ||||||||||| Sbjct: 116291 ggtttcaactctagcctaccctagcttgcttgggactaaa 116330 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 33 taggtttcacctctagcctaccccaacttgttt 65 ||||||| | ||||||| ||||||||||||||| Sbjct: 109121 taggttttaactctagcttaccccaacttgttt 109153
>gb|AY691949.1| Zea mays alcohol dehydrogenase 1 (adh1A) gene, complete cds; Fourf copia_LTR and Huck gypsy_LTR retrotransposons, complete sequence; Opie2 copia_LTR retrotransposon Zeon gypsy_LTR and Opie1 copia_LTR retrotransposons, complete sequence; Ji copia_LTR retrotransposon, complete sequence; and unknown protein (adh1B), cyclin H-1 (adh1C), unknown protein (adh1D), hypothetical protein (adh1E), and unknown protein (adh1F) genes, complete cds Length = 126039 Score = 48.1 bits (24), Expect = 0.037 Identities = 36/40 (90%) Strand = Plus / Plus Query: 35 ggtttcacctctagcctaccccaacttgtttgggactaaa 74 ||||||| ||||||||||||| | |||| ||||||||||| Sbjct: 99622 ggtttcaactctagcctaccctagcttgcttgggactaaa 99661 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 33 taggtttcacctctagcctaccccaacttgttt 65 ||||||| | ||||||| ||||||||||||||| Sbjct: 92495 taggttttaactctagcttaccccaacttgttt 92527
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 48.1 bits (24), Expect = 0.037 Identities = 33/36 (91%) Strand = Plus / Minus Query: 35 ggtttcacctctagcctaccccaacttgtttgggac 70 ||||||| |||||||||||| |||||||||||||| Sbjct: 19839899 ggtttcatctctagcctaccaaaacttgtttgggac 19839864 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 422 tgcaaggcttgttgatacattgtc 445 ||||||||||||| |||||||||| Sbjct: 22271934 tgcaaggcttgttcatacattgtc 22271957
>gb|AF542974.1| Triticum aestivum Emr1 mRNA, complete cds Length = 1564 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 48 gcctaccccaacttgtttgggactaaa 74 ||||||||||||||||||| ||||||| Sbjct: 165 gcctaccccaacttgtttgcgactaaa 139
>gb|AC165176.2| Zea mays clone ZMMBBb-177G21, complete sequence Length = 176679 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 48 gcctaccccaacttgtttgggactaaa 74 ||||||||||||||||| ||||||||| Sbjct: 5585 gcctaccccaacttgttcgggactaaa 5559
>gb|AY096801.1| Nicotiana tabacum isolate 2 squalene synthase gene, partial cds Length = 5251 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Plus Query: 46 tagcctaccccaacttgtttgggact 71 ||||| |||||||||||||||||||| Sbjct: 2747 tagccgaccccaacttgtttgggact 2772
>gb|U59683.1|NTU59683 Nicotiana tabacum squalene synthase (TSS) gene, complete cds Length = 7173 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Plus Query: 46 tagcctaccccaacttgtttgggact 71 ||||| |||||||||||||||||||| Sbjct: 2765 tagccgaccccaacttgtttgggact 2790
>dbj|AP005406.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1147B12 Length = 127902 Score = 44.1 bits (22), Expect = 0.58 Identities = 28/30 (93%) Strand = Plus / Plus Query: 46 tagcctaccccaacttgtttgggactaaag 75 ||||||||||||||||| ||||| |||||| Sbjct: 74611 tagcctaccccaacttggttgggcctaaag 74640
>gb|U25628.1|NAU25628 Nicotiana alata stigma-specific arabinogalactan-protein precursor (AGPNa3) mRNA, complete cds Length = 754 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Plus Query: 46 tagcctaccccaacttgtttgggact 71 ||||| |||||||||||||||||||| Sbjct: 568 tagccgaccccaacttgtttgggact 593
>gb|AC144737.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0018K15, complete sequence Length = 168519 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 43 ctctagcctaccccaacttgtttgg 67 |||||||||||||||||||| |||| Sbjct: 60746 ctctagcctaccccaacttgcttgg 60722
>gb|AC091734.3| Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0068A07, from Chromosome 10, complete sequence Length = 154505 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 50 ctaccccaacttgtttgggactaaaggct 78 |||||||| |||| ||||||||||||||| Sbjct: 86610 ctaccccagcttgcttgggactaaaggct 86582
>dbj|AK056822.1| Homo sapiens cDNA FLJ32260 fis, clone PROST1000334 Length = 2454 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 411 atccactcctctgcaaggctt 431 ||||||||||||||||||||| Sbjct: 1883 atccactcctctgcaaggctt 1863
>gb|AC156641.2| Mus musculus BAC clone RP23-204J8 from chromosome 9, complete sequence Length = 219981 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 625 gcttttgccaccacgaaatttgggt 649 ||||||||||||| ||||||||||| Sbjct: 74274 gcttttgccaccaagaaatttgggt 74250
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 50 ctaccccaacttgtttgggactaaaggct 78 |||||||| |||| ||||||||||||||| Sbjct: 12566523 ctaccccagcttgcttgggactaaaggct 12566495
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 50 ctaccccaacttgtttgggactaaaggct 78 |||||||| |||| ||||||||||||||| Sbjct: 24161611 ctaccccagcttgcttgggactaaaggct 24161583 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 35 ggtttcacctctagcctaccccaacttg 62 ||||||| |||||||| ||||||||||| Sbjct: 19787507 ggtttcatctctagcccaccccaacttg 19787534
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 43 ctctagcctaccccaacttgtttgg 67 |||||||||||||||||||| |||| Sbjct: 23375210 ctctagcctaccccaacttgcttgg 23375186
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 43 ctctagcctaccccaacttgtttgggactaaag 75 |||||||||| |||||||| |||||||||||| Sbjct: 32417177 ctctagcctatcccaacttccttgggactaaag 32417145
>gb|AC079811.6| Homo sapiens BAC clone CTD-2502L6 from 2, complete sequence Length = 130618 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 411 atccactcctctgcaaggctt 431 ||||||||||||||||||||| Sbjct: 75534 atccactcctctgcaaggctt 75554
>dbj|AP003106.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0665A11 Length = 166421 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 43 ctctagcctaccccaacttgtttgggactaaag 75 |||||||||| |||||||| |||||||||||| Sbjct: 4698 ctctagcctatcccaacttccttgggactaaag 4666
>gb|AY663391.1| Triticum turgidum cultivar Langdon clone BAC 1156G16, complete sequence Length = 187012 Score = 42.1 bits (21), Expect = 2.3 Identities = 31/33 (93%), Gaps = 1/33 (3%) Strand = Plus / Minus Query: 47 agcctaccccaa-cttgtttgggactaaaggct 78 |||||||||||| ||||||| |||||||||||| Sbjct: 38655 agcctaccccaaacttgtttaggactaaaggct 38623
>dbj|AP003371.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1143G03 Length = 137770 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 43 ctctagcctaccccaacttgtttgggactaaag 75 |||||||||| |||||||| |||||||||||| Sbjct: 96674 ctctagcctatcccaacttccttgggactaaag 96642
>dbj|AP003846.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1710_H11 Length = 136107 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 50 ctaccccaacttgtttgggactaaaggct 78 |||||||| |||| ||||||||||||||| Sbjct: 95026 ctaccccagcttgcttgggactaaaggct 94998
>emb|AJ279062.2|ZMA279062 Zea mays rbr2 gene for retinoblastoma-related protein, exons 1-16 Length = 8716 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 38 ttcacctctagcctaccccaa 58 ||||||||||||||||||||| Sbjct: 6301 ttcacctctagcctaccccaa 6281
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 50 ctaccccaacttgtttgggactaaaggct 78 |||||||| |||| ||||||||||||||| Sbjct: 12573863 ctaccccagcttgcttgggactaaaggct 12573835
>emb|AL929125.1| Mouse DNA sequence from clone RP23-262O4 on chromosome 2, complete sequence Length = 183595 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 318 tcttcttttgctttcagaggc 338 ||||||||||||||||||||| Sbjct: 148098 tcttcttttgctttcagaggc 148078
>ref|XM_467367.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1128 Score = 40.1 bits (20), Expect = 9.1 Identities = 35/40 (87%) Strand = Plus / Plus Query: 37 tttcacctctagcctaccccaacttgtttgggactaaagg 76 ||||| |||||||||||| ||||||| | |||||| |||| Sbjct: 1024 tttcatctctagcctacctcaacttgctagggacttaagg 1063
>ref|XM_507523.1| PREDICTED Oryza sativa (japonica cultivar-group), P0724B10.42 mRNA Length = 1144 Score = 40.1 bits (20), Expect = 9.1 Identities = 35/40 (87%) Strand = Plus / Plus Query: 37 tttcacctctagcctaccccaacttgtttgggactaaagg 76 ||||| |||||||||||| ||||||| | |||||| |||| Sbjct: 1032 tttcatctctagcctacctcaacttgctagggacttaagg 1071
>ref|XM_506931.2| PREDICTED Oryza sativa (japonica cultivar-group), P0724B10.42 mRNA Length = 1166 Score = 40.1 bits (20), Expect = 9.1 Identities = 35/40 (87%) Strand = Plus / Plus Query: 37 tttcacctctagcctaccccaacttgtttgggactaaagg 76 ||||| |||||||||||| ||||||| | |||||| |||| Sbjct: 1030 tttcatctctagcctacctcaacttgctagggacttaagg 1069
>gb|AC106169.5| Rattus norvegicus x BAC CH230-105D14 (Children's Hospital Oakland Research Institute) complete sequence Length = 227592 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 588 atctgcaacattcaattgct 607 |||||||||||||||||||| Sbjct: 145887 atctgcaacattcaattgct 145906
>gb|AC035247.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-108D4, complete sequence Length = 204935 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 310 ggttcacatcttcttttgctttca 333 |||||||||| ||||||||||||| Sbjct: 162435 ggttcacatcatcttttgctttca 162458
>gb|AC114828.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0038L23, complete sequence Length = 124582 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 422 tgcaaggcttgttgatacattgtc 445 ||||||||||||| |||||||||| Sbjct: 71749 tgcaaggcttgttcatacattgtc 71772
>gb|AC098733.2| Mus musculus BAC clone RP23-103C10 from 19, complete sequence Length = 214382 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 509 ggcagtcgcctgcttcttca 528 |||||||||||||||||||| Sbjct: 24242 ggcagtcgcctgcttcttca 24261
>gb|AC116723.13| Mus musculus chromosome 3, clone RP23-266J14, complete sequence Length = 184835 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 286 ataacactccattttgttctctag 309 ||||||||||| |||||||||||| Sbjct: 66460 ataacactccactttgttctctag 66437
>gb|AC136842.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0085C16, complete sequence Length = 156069 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 422 tgcaaggcttgttgatacattgtc 445 ||||||||||||| |||||||||| Sbjct: 19 tgcaaggcttgttcatacattgtc 42
>gb|AC157319.2| Zea mays clone ZMMBBb-136E2, complete sequence Length = 138186 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 46 tagcctaccccaacttgtttggga 69 ||||||||||||||||| |||||| Sbjct: 85878 tagcctaccccaacttgcttggga 85855
>emb|AL157401.11| Human DNA sequence from clone RP5-1051H14 on chromosome 10p14-15.1 Contains a heat shock protein pseudogene and a novel gene, complete sequence Length = 130780 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 299 ttgttctctagggttcacatcttc 322 ||||||||||||||||| |||||| Sbjct: 110139 ttgttctctagggttcatatcttc 110162
>gb|AC024886.20| Homo sapiens 3 BAC RP11-25K24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 173270 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 518 ctgcttcttcacttcctcac 537 |||||||||||||||||||| Sbjct: 84318 ctgcttcttcacttcctcac 84337
>dbj|AK049555.1| Mus musculus 7 days embryo whole body cDNA, RIKEN full-length enriched library, clone:C430038H22 product:unclassifiable, full insert sequence Length = 1845 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 atgggatgtgcattgagaag 146 |||||||||||||||||||| Sbjct: 993 atgggatgtgcattgagaag 1012
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 422 tgcaaggcttgttgatacattgtc 445 ||||||||||||| |||||||||| Sbjct: 21961944 tgcaaggcttgttcatacattgtc 21961967
>gb|AC084426.1|CBRG24I15 Caenorhabditis briggsae cosmid G24I15, complete sequence Length = 37636 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 316 catcttcttttgctttcaga 335 |||||||||||||||||||| Sbjct: 34151 catcttcttttgctttcaga 34132
>dbj|AP004269.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0048D08 Length = 145772 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 35 ggtttcacctctagcctaccccaacttg 62 ||||||| |||||||| ||||||||||| Sbjct: 119513 ggtttcatctctagcccaccccaacttg 119540
>dbj|AP005320.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0650C03 Length = 144337 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 35 ggtttcacctctagcctaccccaacttg 62 ||||||| |||||||| ||||||||||| Sbjct: 27666 ggtttcatctctagcccaccccaacttg 27693
>dbj|AP005825.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0724B10 Length = 169143 Score = 40.1 bits (20), Expect = 9.1 Identities = 35/40 (87%) Strand = Plus / Minus Query: 37 tttcacctctagcctaccccaacttgtttgggactaaagg 76 ||||| |||||||||||| ||||||| | |||||| |||| Sbjct: 159827 tttcatctctagcctacctcaacttgctagggacttaagg 159788
>dbj|AP005323.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0680A05 Length = 168092 Score = 40.1 bits (20), Expect = 9.1 Identities = 35/40 (87%) Strand = Plus / Minus Query: 37 tttcacctctagcctaccccaacttgtttgggactaaagg 76 ||||| |||||||||||| ||||||| | |||||| |||| Sbjct: 3630 tttcatctctagcctacctcaacttgctagggacttaagg 3591
>gb|U90128.1|ZMU90128 Zea mays ACCase gene, intron containing colonist1, colonist2 retrotransposons, tic transposon and reverse transcriptase pseudogene, complete sequence Length = 5807 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 35 ggtttcacctctagcctaccccaacttg 62 ||||||| |||||||||||| ||||||| Sbjct: 5699 ggtttcaactctagcctacctcaacttg 5726
>dbj|AK106021.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-C03, full insert sequence Length = 1144 Score = 40.1 bits (20), Expect = 9.1 Identities = 35/40 (87%) Strand = Plus / Plus Query: 37 tttcacctctagcctaccccaacttgtttgggactaaagg 76 ||||| |||||||||||| ||||||| | |||||| |||| Sbjct: 1032 tttcatctctagcctacctcaacttgctagggacttaagg 1071
>dbj|AK104529.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-A04, full insert sequence Length = 1128 Score = 40.1 bits (20), Expect = 9.1 Identities = 35/40 (87%) Strand = Plus / Plus Query: 37 tttcacctctagcctaccccaacttgtttgggactaaagg 76 ||||| |||||||||||| ||||||| | |||||| |||| Sbjct: 1024 tttcatctctagcctacctcaacttgctagggacttaagg 1063
>dbj|AK068080.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013132K15, full insert sequence Length = 1166 Score = 40.1 bits (20), Expect = 9.1 Identities = 35/40 (87%) Strand = Plus / Plus Query: 37 tttcacctctagcctaccccaacttgtttgggactaaagg 76 ||||| |||||||||||| ||||||| | |||||| |||| Sbjct: 1030 tttcatctctagcctacctcaacttgctagggacttaagg 1069
>gb|AC153627.2| Mus musculus 6 BAC RP23-104H13 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 198060 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 atgggatgtgcattgagaag 146 |||||||||||||||||||| Sbjct: 90891 atgggatgtgcattgagaag 90872
>gb|AF098296.1|AF098296 Trichosurus vulpecula prolactin receptor precursor (PRL-R) mRNA, complete cds Length = 3300 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 311 gttcacatcttcttttgctt 330 |||||||||||||||||||| Sbjct: 2208 gttcacatcttcttttgctt 2227
>gb|AC139040.8| Mus musculus chromosome 19, clone RP23-292H20, complete sequence Length = 206197 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 509 ggcagtcgcctgcttcttca 528 |||||||||||||||||||| Sbjct: 9998 ggcagtcgcctgcttcttca 9979
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 494 cagggcatcgatttcggcag 513 |||||||||||||||||||| Sbjct: 1524417 cagggcatcgatttcggcag 1524436
>emb|AL669965.13| Mouse DNA sequence from clone RP23-186F24 on chromosome 4, complete sequence Length = 181196 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 450 ctgtccctctcatgttcttc 469 |||||||||||||||||||| Sbjct: 128545 ctgtccctctcatgttcttc 128526
>gb|CP000172.1| Drosophila melanogaster genomic scaffold 211000022279629 Length = 55390 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 tacaccatcaattataatca 122 |||||||||||||||||||| Sbjct: 30768 tacaccatcaattataatca 30749 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,938,822 Number of Sequences: 3902068 Number of extensions: 4938822 Number of successful extensions: 85375 Number of sequences better than 10.0: 143 Number of HSP's better than 10.0 without gapping: 148 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 84683 Number of HSP's gapped (non-prelim): 686 length of query: 663 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 640 effective length of database: 17,143,297,704 effective search space: 10971710530560 effective search space used: 10971710530560 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
