ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd22g05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY111873.1| Zea mays CL29338_1 mRNA sequence 54 4e-04
2gb|AC109601.9| Oryza sativa chromosome 3 BAC OSJNBa0004G03 genom... 46 0.11
3gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 46 0.11
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.11
5gb|AC101661.7| Mus musculus chromosome 1, clone RP23-26A10, comp... 44 0.42
6emb|AL645669.11| Mouse DNA sequence from clone RP23-26A10 on chr... 44 0.42
7ref|XM_472831.1| Oryza sativa (japonica cultivar-group), predic... 42 1.6
8gb|AC163898.5| Mus musculus chromosome 7, clone RP24-108A5, comp... 42 1.6
9emb|Z83848.1|HS57A13 Human DNA sequence from clone RP1-57A13 on ... 42 1.6
10dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
11dbj|AK120756.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.6
12dbj|AK100883.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.6
13dbj|AK099564.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.6
14emb|AL606441.3|OSJN00012 Oryza sativa genomic DNA, chromosome 4,... 42 1.6
15gb|CP000066.1| Trypanosoma brucei chromosome 3, complete sequence 40 6.5
16gb|AC104642.11| Trypanosoma brucei chromosome 3 clone RPCI93-27C... 40 6.5
17gb|AC079274.4| Mus musculus strain C57BL6/J chromosome 6 clone R... 40 6.5
18gb|AC133081.4| Mus musculus BAC clone RP24-290O13 from chromosom... 40 6.5
19ref|XM_820542.1| Trypanosoma brucei TREU927 clone RPCI93-27C5 3'... 40 6.5
20emb|CR759945.8| Zebrafish DNA sequence from clone CH211-167E4 in... 40 6.5
21gb|AC116322.5| Mus musculus BAC clone RP23-273O16 from chromosom... 40 6.5
22ref|XM_643029.1| Entamoeba histolytica HM-1:IMSS hypothetical pr... 40 6.5
23ref|XM_646196.1| Entamoeba histolytica HM-1:IMSS conserved hypot... 40 6.5
24ref|XM_649852.1| Entamoeba histolytica HM-1:IMSS conserved hypot... 40 6.5
25ref|XM_650868.1| Entamoeba histolytica HM-1:IMSS conserved hypot... 40 6.5
26gb|AC090099.14| Homo sapiens chromosome 11, clone RP11-113D6, co... 40 6.5
27gb|AC113415.3| Homo sapiens chromosome 5 clone RP11-55N10, compl... 40 6.5
28emb|AL929087.4| Zebrafish DNA sequence from clone CH211-226M16 i... 40 6.5
29gb|AC107948.7| Homo sapiens chromosome 11, clone RP11-81D23, com... 40 6.5
30gb|AC026741.6| Homo sapiens chromosome 5 clone CTD-2653M23, comp... 40 6.5
31dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
32gb|AC020699.6| Homo sapiens BAC clone RP11-131K17 from 4, comple... 40 6.5
33gb|AC005235.2| Homo sapiens BAC clone RP11-439M9 from 2, complet... 40 6.5
34dbj|AP000837.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
35emb|Z33352.1|MCAAO M.capricolum DNA for CONTIG MCAAO 40 6.5
36emb|AL772273.11| Zebrafish DNA sequence from clone CH211-153P8, ... 40 6.5
37gb|AC153739.3| Aotus nancymaae clone CH258-485H7, complete sequence 40 6.5
38gb|AE016854.1| Pseudomonas syringae pv. tomato str. DC3000 plasm... 40 6.5
39emb|AL645857.11| Mouse DNA sequence from clone RP23-167N2 on chr... 40 6.5 
>gb|AY111873.1| Zea mays CL29338_1 mRNA sequence
          Length = 1018

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 57/67 (85%)
 Strand = Plus / Plus

                                                                       
Query: 398 caggcatggatccagcaaaattctcccttggcaaaatttgcatcggcggtggatggcagt 457
           |||||||||||||||||    ||||||||||||| ||| | ||  |||||||| ||||||
Sbjct: 412 caggcatggatccagcagccctctcccttggcaagattgggatttgcggtggaaggcagt 471

                  
Query: 458 aaaatgg 464
           |||||||
Sbjct: 472 aaaatgg 478
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>gb|AC109601.9| Oryza sativa chromosome 3 BAC OSJNBa0004G03 genomic sequence, complete
             sequence
          Length = 145590

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 316   ggaggctggacacgagacggggtgaga 342
             |||||||||||| ||||||||||||||
Sbjct: 43957 ggaggctggacatgagacggggtgaga 43983
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                           
Query: 316      ggaggctggacacgagacggggtgaga 342
                |||||||||||| ||||||||||||||
Sbjct: 22448710 ggaggctggacatgagacggggtgaga 22448736
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                           
Query: 316      ggaggctggacacgagacggggtgaga 342
                |||||||||||| ||||||||||||||
Sbjct: 22441739 ggaggctggacatgagacggggtgaga 22441765
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>gb|AC101661.7| Mus musculus chromosome 1, clone RP23-26A10, complete sequence
          Length = 228933

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 109    tgtacctgagaagacaactaaagaaagcaa 138
              ||||||||| ||| ||||||||||||||||
Sbjct: 197470 tgtacctgacaaggcaactaaagaaagcaa 197441
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>emb|AL645669.11| Mouse DNA sequence from clone RP23-26A10 on chromosome 1 Contains part of
              the gene for ortholog of human amyotrophic lateral
              sclerosis 2 (juvenile) chromosome region candidate 19
              (ALS2CR19), complete sequence
          Length = 228932

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 109    tgtacctgagaagacaactaaagaaagcaa 138
              ||||||||| ||| ||||||||||||||||
Sbjct: 197469 tgtacctgacaaggcaactaaagaaagcaa 197440
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>ref|XM_472831.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3720

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 267  tcaccgtaaatcctgcgaatagtaaacatgcgggtttatgtaacc 311
            ||||||||||| |||||||||||| ||    ||||||||||||||
Sbjct: 3720 tcaccgtaaattctgcgaatagtagaccgatgggtttatgtaacc 3676
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>gb|AC163898.5| Mus musculus chromosome 7, clone RP24-108A5, complete sequence
          Length = 143726

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 74     gaatgtaattaaaacactttg 94
              |||||||||||||||||||||
Sbjct: 110534 gaatgtaattaaaacactttg 110514
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>emb|Z83848.1|HS57A13 Human DNA sequence from clone RP1-57A13 on chromosome Xq24 Contains the
             5' end of the GRIA3 gene for glutamate receptor,
             ionotrophic, AMPA 3, the gene for a novel protein and a
             CpG island, complete sequence
          Length = 169693

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 43    ataccattctataatgtgctg 63
             |||||||||||||||||||||
Sbjct: 43831 ataccattctataatgtgctg 43811
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                             
Query: 267      tcaccgtaaatcctgcgaatagtaaacatgcgggtttatgtaacc 311
                ||||||||||| |||||||||||| ||    ||||||||||||||
Sbjct: 23529497 tcaccgtaaattctgcgaatagtagaccgatgggtttatgtaacc 23529541



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 80/99 (80%), Gaps = 1/99 (1%)
 Strand = Plus / Plus

                                                                            
Query: 4        gataaatagtgaaatgtatgcttgatnactattggaaaaataccattctataatgtgctg 63
                ||||||||||||  | ||| |||||  ||||||||| || | |||| ||||||  | |||
Sbjct: 23529213 gataaatagtgaggtatatccttgagcactattggacaa-tgccatactataacttactg 23529271

                                                       
Query: 64       caaatttgcagaatgtaattaaaacactttgaaggcaaa 102
                 || ||||||| |||||||| ||  ||||||||||||||
Sbjct: 23529272 gaactttgcaggatgtaattgaagtactttgaaggcaaa 23529310
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>dbj|AK120756.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023007B14, full
            insert sequence
          Length = 4434

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 267  tcaccgtaaatcctgcgaatagtaaacatgcgggtttatgtaacc 311
            ||||||||||| |||||||||||| ||    ||||||||||||||
Sbjct: 4126 tcaccgtaaattctgcgaatagtagaccgatgggtttatgtaacc 4082



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 80/99 (80%), Gaps = 1/99 (1%)
 Strand = Plus / Minus

                                                                        
Query: 4    gataaatagtgaaatgtatgcttgatnactattggaaaaataccattctataatgtgctg 63
            ||||||||||||  | ||| |||||  ||||||||| || | |||| ||||||  | |||
Sbjct: 4410 gataaatagtgaggtatatccttgagcactattggacaa-tgccatactataacttactg 4352

                                                   
Query: 64   caaatttgcagaatgtaattaaaacactttgaaggcaaa 102
             || ||||||| |||||||| ||  ||||||||||||||
Sbjct: 4351 gaactttgcaggatgtaattgaagtactttgaaggcaaa 4313
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>dbj|AK100883.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023127M15, full
            insert sequence
          Length = 4644

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 267  tcaccgtaaatcctgcgaatagtaaacatgcgggtttatgtaacc 311
            ||||||||||| |||||||||||| ||    ||||||||||||||
Sbjct: 4359 tcaccgtaaattctgcgaatagtagaccgatgggtttatgtaacc 4315



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 80/99 (80%), Gaps = 1/99 (1%)
 Strand = Plus / Minus

                                                                        
Query: 4    gataaatagtgaaatgtatgcttgatnactattggaaaaataccattctataatgtgctg 63
            ||||||||||||  | ||| |||||  ||||||||| || | |||| ||||||  | |||
Sbjct: 4643 gataaatagtgaggtatatccttgagcactattggacaa-tgccatactataacttactg 4585

                                                   
Query: 64   caaatttgcagaatgtaattaaaacactttgaaggcaaa 102
             || ||||||| |||||||| ||  ||||||||||||||
Sbjct: 4584 gaactttgcaggatgtaattgaagtactttgaaggcaaa 4546
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>dbj|AK099564.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013034M05, full
            insert sequence
          Length = 3444

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 267  tcaccgtaaatcctgcgaatagtaaacatgcgggtttatgtaacc 311
            ||||||||||| |||||||||||| ||    ||||||||||||||
Sbjct: 3218 tcaccgtaaattctgcgaatagtagaccgatgggtttatgtaacc 3174
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>emb|AL606441.3|OSJN00012 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0089K21,
             complete sequence
          Length = 139298

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                          
Query: 267   tcaccgtaaatcctgcgaatagtaaacatgcgggtttatgtaacc 311
             ||||||||||| |||||||||||| ||    ||||||||||||||
Sbjct: 85400 tcaccgtaaattctgcgaatagtagaccgatgggtttatgtaacc 85444



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 80/99 (80%), Gaps = 1/99 (1%)
 Strand = Plus / Plus

                                                                         
Query: 4     gataaatagtgaaatgtatgcttgatnactattggaaaaataccattctataatgtgctg 63
             ||||||||||||  | ||| |||||  ||||||||| || | |||| ||||||  | |||
Sbjct: 85116 gataaatagtgaggtatatccttgagcactattggacaa-tgccatactataacttactg 85174

                                                    
Query: 64    caaatttgcagaatgtaattaaaacactttgaaggcaaa 102
              || ||||||| |||||||| ||  ||||||||||||||
Sbjct: 85175 gaactttgcaggatgtaattgaagtactttgaaggcaaa 85213
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>gb|CP000066.1| Trypanosoma brucei chromosome 3, complete sequence
          Length = 1653225

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 382    ccaaccatggggaaagcagg 401
              ||||||||||||||||||||
Sbjct: 788099 ccaaccatggggaaagcagg 788080
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>gb|AC104642.11| Trypanosoma brucei chromosome 3 clone RPCI93-27C5, complete sequence
          Length = 126762

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 382   ccaaccatggggaaagcagg 401
             ||||||||||||||||||||
Sbjct: 97047 ccaaccatggggaaagcagg 97028
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>gb|AC079274.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-142L8, complete
             sequence
          Length = 113724

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 389   tggggaaagcaggcatggat 408
             ||||||||||||||||||||
Sbjct: 74198 tggggaaagcaggcatggat 74179
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>gb|AC133081.4| Mus musculus BAC clone RP24-290O13 from chromosome 3, complete sequence
          Length = 180525

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 224    atctcattttcaagttctct 243
              ||||||||||||||||||||
Sbjct: 100629 atctcattttcaagttctct 100610
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>ref|XM_820542.1| Trypanosoma brucei TREU927 clone RPCI93-27C5 3', 5'-cyclic nucleotide
            phosphodiesterase (Tb927.3.3070) partial mRNA
          Length = 2730

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 382  ccaaccatggggaaagcagg 401
            ||||||||||||||||||||
Sbjct: 1856 ccaaccatggggaaagcagg 1875
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>emb|CR759945.8| Zebrafish DNA sequence from clone CH211-167E4 in linkage group 13,
             complete sequence
          Length = 146960

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 51    ctataatgtgctgcaaattt 70
             ||||||||||||||||||||
Sbjct: 98547 ctataatgtgctgcaaattt 98566
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>gb|AC116322.5| Mus musculus BAC clone RP23-273O16 from chromosome 15, complete
             sequence
          Length = 190750

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 451   tggcagtaaaatggcctgag 470
             ||||||||||||||||||||
Sbjct: 30150 tggcagtaaaatggcctgag 30131
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>ref|XM_643029.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (557.t00002)
           partial mRNA
          Length = 1527

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 160 tgttgagagtcagacatctt 179
           ||||||||||||||||||||
Sbjct: 125 tgttgagagtcagacatctt 106
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>ref|XM_646196.1| Entamoeba histolytica HM-1:IMSS conserved hypothetical protein
           (172.t00002) partial mRNA
          Length = 2397

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 160 tgttgagagtcagacatctt 179
           ||||||||||||||||||||
Sbjct: 125 tgttgagagtcagacatctt 106
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>ref|XM_649852.1| Entamoeba histolytica HM-1:IMSS conserved hypothetical protein
           (40.t00005) partial mRNA
          Length = 2784

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 160 tgttgagagtcagacatctt 179
           ||||||||||||||||||||
Sbjct: 125 tgttgagagtcagacatctt 106
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>ref|XM_650868.1| Entamoeba histolytica HM-1:IMSS conserved hypothetical protein
           (20.t00003) partial mRNA
          Length = 1779

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 160 tgttgagagtcagacatctt 179
           ||||||||||||||||||||
Sbjct: 125 tgttgagagtcagacatctt 106
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>gb|AC090099.14| Homo sapiens chromosome 11, clone RP11-113D6, complete sequence
          Length = 172939

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 115   tgagaagacaactaaagaaa 134
             ||||||||||||||||||||
Sbjct: 12740 tgagaagacaactaaagaaa 12759
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>gb|AC113415.3| Homo sapiens chromosome 5 clone RP11-55N10, complete sequence
          Length = 170798

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 68    tttgcagaatgtaattaaaa 87
             ||||||||||||||||||||
Sbjct: 40956 tttgcagaatgtaattaaaa 40937
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>emb|AL929087.4| Zebrafish DNA sequence from clone CH211-226M16 in linkage group 23
              Contains three novel genes and a CpG island, complete
              sequence
          Length = 205160

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 59     tgctgcaaatttgcagaatg 78
              ||||||||||||||||||||
Sbjct: 198995 tgctgcaaatttgcagaatg 198976
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>gb|AC107948.7| Homo sapiens chromosome 11, clone RP11-81D23, complete sequence
          Length = 156839

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 115   tgagaagacaactaaagaaa 134
             ||||||||||||||||||||
Sbjct: 90888 tgagaagacaactaaagaaa 90907
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>gb|AC026741.6| Homo sapiens chromosome 5 clone CTD-2653M23, complete sequence
          Length = 195849

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 34    attggaaaaataccattcta 53
             ||||||||||||||||||||
Sbjct: 58900 attggaaaaataccattcta 58919
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 4       gataaatagtgaaatgtatg 23
               ||||||||||||||||||||
Sbjct: 9514555 gataaatagtgaaatgtatg 9514536
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>gb|AC020699.6| Homo sapiens BAC clone RP11-131K17 from 4, complete sequence
          Length = 186961

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 222   aaatctcattttcaagttct 241
             ||||||||||||||||||||
Sbjct: 15093 aaatctcattttcaagttct 15074
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>gb|AC005235.2| Homo sapiens BAC clone RP11-439M9 from 2, complete sequence
          Length = 197911

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 225   tctcattttcaagttctctt 244
             ||||||||||||||||||||
Sbjct: 47540 tctcattttcaagttctctt 47521
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>dbj|AP000837.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             clone:P0424A08
          Length = 151294

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 4     gataaatagtgaaatgtatg 23
             ||||||||||||||||||||
Sbjct: 47984 gataaatagtgaaatgtatg 47965
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>emb|Z33352.1|MCAAO M.capricolum DNA for CONTIG MCAAO
          Length = 1629

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 119  aagacaactaaagaaagcaa 138
            ||||||||||||||||||||
Sbjct: 1408 aagacaactaaagaaagcaa 1427
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>emb|AL772273.11| Zebrafish DNA sequence from clone CH211-153P8, complete sequence
          Length = 171830

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 51    ctataatgtgctgcaaattt 70
             ||||||||||||||||||||
Sbjct: 33786 ctataatgtgctgcaaattt 33767
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>gb|AC153739.3| Aotus nancymaae clone CH258-485H7, complete sequence
          Length = 47312

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 220   acaaatctcattttcaagtt 239
             ||||||||||||||||||||
Sbjct: 36430 acaaatctcattttcaagtt 36411
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>gb|AE016854.1| Pseudomonas syringae pv. tomato str. DC3000 plasmid pDC3000B, complete
             sequence
          Length = 67473

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 32    ctattggaaaaataccattc 51
             ||||||||||||||||||||
Sbjct: 36245 ctattggaaaaataccattc 36226
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>emb|AL645857.11| Mouse DNA sequence from clone RP23-167N2 on chromosome X, complete
              sequence
          Length = 137904

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 64     caaatttgcagaatgtaatt 83
              ||||||||||||||||||||
Sbjct: 120809 caaatttgcagaatgtaatt 120828


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,589,577
Number of Sequences: 3902068
Number of extensions: 4589577
Number of successful extensions: 86892
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 86691
Number of HSP's gapped (non-prelim): 194
length of query: 482
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 460
effective length of database: 17,147,199,772
effective search space: 7887711895120
effective search space used: 7887711895120
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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