ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd22g04 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X97771.1|HVPSII10K H.vulgare mRNA for PSII 10kD protein Length = 575 Score = 731 bits (369), Expect = 0.0 Identities = 376/377 (99%), Gaps = 1/377 (0%) Strand = Plus / Minus Query: 1 tttactgatttgcgggtagtgatatttgtatcc-ttacatatgtcctgacggttataatc 59 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 556 tttactgatttgcgggtagtgatatttgtatccattacatatgtcctgacggttataatc 497 Query: 60 cgcactattatacacatcgtttggtgcatagcttggtttgctgcacataggcttcaggaa 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 496 cgcactattatacacatcgtttggtgcatagcttggtttgctgcacataggcttcaggaa 437 Query: 120 gccaaggcgctagtactgtagacaagaagagcaccgcccagcagaattccagcaagagtc 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 436 gccaaggcgctagtactgtagacaagaagagcaccgcccagcagaattccagcaagagtc 377 Query: 180 actgcccagagaaacagccccgtctttcctccaacataaacgtcgccacttggagaccac 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 376 actgcccagagaaacagccccgtctttcctccaacataaacgtcgccacttggagaccac 317 Query: 240 tcttctggtgtgtatatagggctgtacccatcaacatttgctccatacttgtcggcaaac 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 316 tcttctggtgtgtatatagggctgtacccatcaacatttgctccatacttgtcggcaaac 257 Query: 300 tggtaaacacccttccccttggctacccttccagacgcatcgacgccttccttgaacgcc 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 256 tggtaaacacccttccccttggctacccttccagacgcatcgacgccttccttgaacgcc 197 Query: 360 actccaccaccaggccc 376 ||||||||||||||||| Sbjct: 196 actccaccaccaggccc 180 Score = 307 bits (155), Expect = 2e-80 Identities = 155/155 (100%) Strand = Plus / Minus Query: 466 ccgtagggttgggcagtctggaccttcttcgccttcttggccactatgaccaacgacggc 525 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ccgtagggttgggcagtctggaccttcttcgccttcttggccactatgaccaacgacggc 122 Query: 526 ctcgccgatggtcgcacgcctccaagcttggatcgttgtaacagaggagaggaagatggt 585 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ctcgccgatggtcgcacgcctccaagcttggatcgttgtaacagaggagaggaagatggt 62 Query: 586 ttcagagccaaagatgccatgacacaggcagacat 620 ||||||||||||||||||||||||||||||||||| Sbjct: 61 ttcagagccaaagatgccatgacacaggcagacat 27
>emb|AJ234408.1|HVU234408 Hordeum vulgare partial mRNA; clone cMWG0658 Length = 377 Score = 379 bits (191), Expect = e-102 Identities = 207/211 (98%), Gaps = 2/211 (0%) Strand = Plus / Minus Query: 168 ccagcaagagtcactgcccagagaaacagccccgtctttcctccaacataaacgtcgcca 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 377 ccagcaagagtcactgcccagagaaacagccccgtctttcctccaacataaacgtcgcca 318 Query: 228 cttggagaccactcttctggtgtgtatatagggctgtacccatcaacatttgctccatac 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 317 cttggagaccactcttctggtgtgtatatagggctgtacccatcaacatttgctccatac 258 Query: 288 ttgtcgg-caaactggtaaacacccttccccttggctacccttcc-agacgcatcgacgc 345 ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 257 ttgtcggnhdaactggtaaacacccttccccttggctacccttccaagacgcatcgacgc 198 Query: 346 cttccttgaacgccactccaccaccaggccc 376 ||||||||||||||||||||||||||||||| Sbjct: 197 cttccttgaacgccactccaccaccaggccc 167 Score = 307 bits (155), Expect = 2e-80 Identities = 155/155 (100%) Strand = Plus / Minus Query: 466 ccgtagggttgggcagtctggaccttcttcgccttcttggccactatgaccaacgacggc 525 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 168 ccgtagggttgggcagtctggaccttcttcgccttcttggccactatgaccaacgacggc 109 Query: 526 ctcgccgatggtcgcacgcctccaagcttggatcgttgtaacagaggagaggaagatggt 585 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108 ctcgccgatggtcgcacgcctccaagcttggatcgttgtaacagaggagaggaagatggt 49 Query: 586 ttcagagccaaagatgccatgacacaggcagacat 620 ||||||||||||||||||||||||||||||||||| Sbjct: 48 ttcagagccaaagatgccatgacacaggcagacat 14
>emb|AJ234420.1|HVU234420 Hordeum vulgare partial mRNA; clone cMWG0681 Length = 247 Score = 307 bits (155), Expect = 2e-80 Identities = 155/155 (100%) Strand = Plus / Minus Query: 466 ccgtagggttgggcagtctggaccttcttcgccttcttggccactatgaccaacgacggc 525 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 168 ccgtagggttgggcagtctggaccttcttcgccttcttggccactatgaccaacgacggc 109 Query: 526 ctcgccgatggtcgcacgcctccaagcttggatcgttgtaacagaggagaggaagatggt 585 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108 ctcgccgatggtcgcacgcctccaagcttggatcgttgtaacagaggagaggaagatggt 49 Query: 586 ttcagagccaaagatgccatgacacaggcagacat 620 ||||||||||||||||||||||||||||||||||| Sbjct: 48 ttcagagccaaagatgccatgacacaggcagacat 14 Score = 161 bits (81), Expect = 3e-36 Identities = 81/81 (100%) Strand = Plus / Minus Query: 296 aaactggtaaacacccttccccttggctacccttccagacgcatcgacgccttccttgaa 355 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 247 aaactggtaaacacccttccccttggctacccttccagacgcatcgacgccttccttgaa 188 Query: 356 cgccactccaccaccaggccc 376 ||||||||||||||||||||| Sbjct: 187 cgccactccaccaccaggccc 167
>ref|XM_476619.1| Oryza sativa (japonica cultivar-group), mRNA Length = 620 Score = 224 bits (113), Expect = 3e-55 Identities = 209/241 (86%) Strand = Plus / Minus Query: 136 tgtagacaagaagagcaccgcccagcagaattccagcaagagtcactgcccagagaaaca 195 |||||||||||| ||| ||||| | ||||||||||||||||| | ||||||||||| | Sbjct: 460 tgtagacaagaatagcgccgccaactagaattccagcaagagtgattgcccagagaagta 401 Query: 196 gccccgtctttcctccaacataaacgtcgccacttggagaccactcttctggtgtgtata 255 || | ||||||||||||||| || || ||| ||| |||||| |||||||| || |||| Sbjct: 400 aacctgcctttcctccaacatagacatcaccagttgaagaccattcttctggggtatata 341 Query: 256 tagggctgtacccatcaacatttgctccatacttgtcggcaaactggtaaacacccttcc 315 | |||||||||||||||||||||||||||||||||| || ||||||||||| |||||| | Sbjct: 340 ttgggctgtacccatcaacatttgctccatacttgttggaaaactggtaaagaccctttc 281 Query: 316 ccttggctacccttccagacgcatcgacgccttccttgaacgccactccaccaccaggcc 375 ||||||||||||||||||| ||||| || |||||||||||| ||||||| ||| |||||| Sbjct: 280 ccttggctacccttccagatgcatcaacaccttccttgaacaccactcctccagcaggcc 221 Query: 376 c 376 | Sbjct: 220 c 220 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 579 agatggtttcagagccaaagatgccatgacacaggcag 616 ||||||||||||||||| ||| ||||||||| |||||| Sbjct: 108 agatggtttcagagccagagaagccatgacagaggcag 71
>dbj|AK062172.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-C07, full insert sequence Length = 620 Score = 224 bits (113), Expect = 3e-55 Identities = 209/241 (86%) Strand = Plus / Minus Query: 136 tgtagacaagaagagcaccgcccagcagaattccagcaagagtcactgcccagagaaaca 195 |||||||||||| ||| ||||| | ||||||||||||||||| | ||||||||||| | Sbjct: 460 tgtagacaagaatagcgccgccaactagaattccagcaagagtgattgcccagagaagta 401 Query: 196 gccccgtctttcctccaacataaacgtcgccacttggagaccactcttctggtgtgtata 255 || | ||||||||||||||| || || ||| ||| |||||| |||||||| || |||| Sbjct: 400 aacctgcctttcctccaacatagacatcaccagttgaagaccattcttctggggtatata 341 Query: 256 tagggctgtacccatcaacatttgctccatacttgtcggcaaactggtaaacacccttcc 315 | |||||||||||||||||||||||||||||||||| || ||||||||||| |||||| | Sbjct: 340 ttgggctgtacccatcaacatttgctccatacttgttggaaaactggtaaagaccctttc 281 Query: 316 ccttggctacccttccagacgcatcgacgccttccttgaacgccactccaccaccaggcc 375 ||||||||||||||||||| ||||| || |||||||||||| ||||||| ||| |||||| Sbjct: 280 ccttggctacccttccagatgcatcaacaccttccttgaacaccactcctccagcaggcc 221 Query: 376 c 376 | Sbjct: 220 c 220 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 579 agatggtttcagagccaaagatgccatgacacaggcag 616 ||||||||||||||||| ||| ||||||||| |||||| Sbjct: 108 agatggtttcagagccagagaagccatgacagaggcag 71
>dbj|AK120691.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013169L11, full insert sequence Length = 777 Score = 216 bits (109), Expect = 7e-53 Identities = 208/241 (86%) Strand = Plus / Minus Query: 136 tgtagacaagaagagcaccgcccagcagaattccagcaagagtcactgcccagagaaaca 195 |||||||||||| ||| ||||| | ||| ||||||||||||| | ||||||||||| | Sbjct: 461 tgtagacaagaatagcgccgccaactagacttccagcaagagtgattgcccagagaagta 402 Query: 196 gccccgtctttcctccaacataaacgtcgccacttggagaccactcttctggtgtgtata 255 || | ||||||||||||||| || || ||| ||| |||||| |||||||| || |||| Sbjct: 401 aacctgcctttcctccaacatagacatcaccagttgaagaccattcttctggggtatata 342 Query: 256 tagggctgtacccatcaacatttgctccatacttgtcggcaaactggtaaacacccttcc 315 | |||||||||||||||||||||||||||||||||| || ||||||||||| |||||| | Sbjct: 341 ttgggctgtacccatcaacatttgctccatacttgttggaaaactggtaaagaccctttc 282 Query: 316 ccttggctacccttccagacgcatcgacgccttccttgaacgccactccaccaccaggcc 375 ||||||||||||||||||| ||||| || |||||||||||| ||||||| ||| |||||| Sbjct: 281 ccttggctacccttccagatgcatcaacaccttccttgaacaccactcctccagcaggcc 222 Query: 376 c 376 | Sbjct: 221 c 221 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 579 agatggtttcagagccaaagatgccatgacacaggcag 616 ||||||||||||||||| ||| ||||||||| |||||| Sbjct: 109 agatggtttcagagccagagaagccatgacagaggcag 72
>ref|XM_476620.1| Oryza sativa (japonica cultivar-group), mRNA Length = 405 Score = 190 bits (96), Expect = 4e-45 Identities = 177/204 (86%) Strand = Plus / Minus Query: 117 gaagccaaggcgctagtactgtagacaagaagagcaccgcccagcagaattccagcaaga 176 ||||||||||| |||||| ||||||||||||||||||| ||||||||||||||| |||| Sbjct: 401 gaagccaaggcactagtattgtagacaagaagagcaccagccagcagaattccagaaaga 342 Query: 177 gtcactgcccagagaaacagccccgtctttcctccaacataaacgtcgccacttggagac 236 || ||||||||||| |||| ||| |||||||||||| |||||| || |||||||| ||| Sbjct: 341 gtgactgcccagagcaacaaccctgtctttcctccagtataaacatcaccacttggtgac 282 Query: 237 cactcttctggtgtgtatatagggctgtacccatcaacatttgctccatacttgtcggca 296 || || ||||| | ||||| |||||||| ||||||||||| |||||||||||| |||| Sbjct: 281 cattcctctgggttatatattgggctgtatccatcaacattagctccatacttgctggca 222 Query: 297 aactggtaaacacccttccccttg 320 |||||||| || || ||||||||| Sbjct: 221 aactggtagacccctttccccttg 198
>gb|AY146990.1| Xerophyta humilis photosystem II 10 kDa protein (PsbR) mRNA, complete cds Length = 698 Score = 121 bits (61), Expect = 3e-24 Identities = 154/185 (83%) Strand = Plus / Minus Query: 135 ctgtagacaagaagagcaccgcccagcagaattccagcaagagtcactgcccagagaaac 194 ||||| |||||||||||||| || ||||| |||||||||||| | |||||||| || Sbjct: 474 ctgtacacaagaagagcacctccacccagaagtccagcaagagtgattgcccagacaatg 415 Query: 195 agccccgtctttcctccaacataaacgtcgccacttggagaccactcttctggtgtgtat 254 || || || |||||||||||||||| || ||||| |||||||| || ||||||| ||| Sbjct: 414 agaccagtggttcctccaacataaacatcaccactaggagaccattcgtctggtgagtag 355 Query: 255 atagggctgtacccatcaacatttgctccatacttgtcggcaaactggtaaacacccttc 314 || |||||||| |||||||||||||| ||||| ||||| |||| ||||| |||||||| Sbjct: 354 atcgggctgtagccatcaacatttgcaccatatttgtccacaaattggtagacacccttt 295 Query: 315 ccctt 319 ||||| Sbjct: 294 ccctt 290
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 119 bits (60), Expect = 1e-23 Identities = 90/100 (90%) Strand = Plus / Minus Query: 110 gcttcaggaagccaaggcgctagtactgtagacaagaagagcaccgcccagcagaattcc 169 |||||| ||||||||||| |||||| ||||||||||||||||||| ||||||||||||| Sbjct: 2490122 gcttcaagaagccaaggcactagtattgtagacaagaagagcaccagccagcagaattcc 2490063 Query: 170 agcaagagtcactgcccagagaaacagccccgtctttcct 209 || |||||| ||||||||||| |||| ||| ||||||||| Sbjct: 2490062 agaaagagtgactgcccagagcaacaaccctgtctttcct 2490023 Score = 83.8 bits (42), Expect = 6e-13 Identities = 54/58 (93%) Strand = Plus / Minus Query: 261 ctgtacccatcaacatttgctccatacttgtcggcaaactggtaaacacccttcccct 318 ||||||||||||||||||||||||||||||| || ||||||||||| |||||| |||| Sbjct: 2487136 ctgtacccatcaacatttgctccatacttgttggaaaactggtaaagaccctttccct 2487079 Score = 77.8 bits (39), Expect = 4e-11 Identities = 57/63 (90%) Strand = Plus / Minus Query: 316 ccttggctacccttccagacgcatcgacgccttccttgaacgccactccaccaccaggcc 375 ||||||||||||||||||| ||||| || |||||||||||| ||||||| ||| |||||| Sbjct: 2486995 ccttggctacccttccagatgcatcaacaccttccttgaacaccactcctccagcaggcc 2486936 Query: 376 cta 378 ||| Sbjct: 2486935 cta 2486933 Score = 60.0 bits (30), Expect = 9e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 261 ctgtacccatcaacatttgctccatacttgtcggcaaactggtaaacacccttcccct 318 ||||| ||||||||||| |||||||||||| |||||||||||| || || ||||||| Sbjct: 2489753 ctgtatccatcaacattagctccatacttgctggcaaactggtagacccctttcccct 2489696 Score = 58.0 bits (29), Expect = 4e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 136 tgtagacaagaagagcaccgcccagcagaattccagcaagagtcactgcccagagaa 192 |||||||||||| ||| ||||| | ||||||||||||||||| | ||||||||||| Sbjct: 2487628 tgtagacaagaatagcgccgccaactagaattccagcaagagtgattgcccagagaa 2487572 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 579 agatggtttcagagccaaagatgccatgacacaggcag 616 ||||||||||||||||| ||| ||||||||| |||||| Sbjct: 2486597 agatggtttcagagccagagaagccatgacagaggcag 2486560 Score = 46.1 bits (23), Expect = 0.14 Identities = 50/59 (84%) Strand = Plus / Minus Query: 207 cctccaacataaacgtcgccacttggagaccactcttctggtgtgtatatagggctgta 265 ||||||||||| || || ||| ||| |||||| |||||||| || ||||| |||||||| Sbjct: 2487433 cctccaacatagacatcaccagttgaagaccattcttctggggtatatattgggctgta 2487375
>dbj|AP004263.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0022E03 Length = 163032 Score = 119 bits (60), Expect = 1e-23 Identities = 90/100 (90%) Strand = Plus / Minus Query: 110 gcttcaggaagccaaggcgctagtactgtagacaagaagagcaccgcccagcagaattcc 169 |||||| ||||||||||| |||||| ||||||||||||||||||| ||||||||||||| Sbjct: 55102 gcttcaagaagccaaggcactagtattgtagacaagaagagcaccagccagcagaattcc 55043 Query: 170 agcaagagtcactgcccagagaaacagccccgtctttcct 209 || |||||| ||||||||||| |||| ||| ||||||||| Sbjct: 55042 agaaagagtgactgcccagagcaacaaccctgtctttcct 55003 Score = 83.8 bits (42), Expect = 6e-13 Identities = 54/58 (93%) Strand = Plus / Minus Query: 261 ctgtacccatcaacatttgctccatacttgtcggcaaactggtaaacacccttcccct 318 ||||||||||||||||||||||||||||||| || ||||||||||| |||||| |||| Sbjct: 52116 ctgtacccatcaacatttgctccatacttgttggaaaactggtaaagaccctttccct 52059 Score = 77.8 bits (39), Expect = 4e-11 Identities = 57/63 (90%) Strand = Plus / Minus Query: 316 ccttggctacccttccagacgcatcgacgccttccttgaacgccactccaccaccaggcc 375 ||||||||||||||||||| ||||| || |||||||||||| ||||||| ||| |||||| Sbjct: 51975 ccttggctacccttccagatgcatcaacaccttccttgaacaccactcctccagcaggcc 51916 Query: 376 cta 378 ||| Sbjct: 51915 cta 51913 Score = 60.0 bits (30), Expect = 9e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 261 ctgtacccatcaacatttgctccatacttgtcggcaaactggtaaacacccttcccct 318 ||||| ||||||||||| |||||||||||| |||||||||||| || || ||||||| Sbjct: 54733 ctgtatccatcaacattagctccatacttgctggcaaactggtagacccctttcccct 54676 Score = 58.0 bits (29), Expect = 4e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 136 tgtagacaagaagagcaccgcccagcagaattccagcaagagtcactgcccagagaa 192 |||||||||||| ||| ||||| | ||||||||||||||||| | ||||||||||| Sbjct: 52608 tgtagacaagaatagcgccgccaactagaattccagcaagagtgattgcccagagaa 52552 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 579 agatggtttcagagccaaagatgccatgacacaggcag 616 ||||||||||||||||| ||| ||||||||| |||||| Sbjct: 51577 agatggtttcagagccagagaagccatgacagaggcag 51540 Score = 46.1 bits (23), Expect = 0.14 Identities = 50/59 (84%) Strand = Plus / Minus Query: 207 cctccaacataaacgtcgccacttggagaccactcttctggtgtgtatatagggctgta 265 ||||||||||| || || ||| ||| |||||| |||||||| || ||||| |||||||| Sbjct: 52413 cctccaacatagacatcaccagttgaagaccattcttctggggtatatattgggctgta 52355
>emb|X70088.1|NTNTPII10 N. tabacum mRNA for NtpII10 Length = 639 Score = 89.7 bits (45), Expect = 1e-14 Identities = 96/113 (84%) Strand = Plus / Minus Query: 207 cctccaacataaacgtcgccacttggagaccactcttctggtgtgtatatagggctgtac 266 ||||||||||| || || |||||||||||||| || |||| |||| || |||||||| Sbjct: 342 cctccaacatagacatcaccacttggagaccagtcatctgtgttgtagatggggctgtat 283 Query: 267 ccatcaacatttgctccatacttgtcggcaaactggtaaacacccttcccctt 319 |||||||||||||||||||| ||||| | || |||||||||||||| ||||| Sbjct: 282 ccatcaacatttgctccatatttgtcaacgaattggtaaacaccctttccctt 230
>gb|AY310792.1| Nicotiana benthamiana clone 10-302 unknown mRNA Length = 438 Score = 85.7 bits (43), Expect = 2e-13 Identities = 97/115 (84%) Strand = Plus / Minus Query: 207 cctccaacataaacgtcgccacttggagaccactcttctggtgtgtatatagggctgtac 266 ||||||||||| || || || ||||||||||| || |||| |||| || |||||||| Sbjct: 197 cctccaacatagacatcaccgcttggagaccagtcatctgtgttgtagatggggctgtat 138 Query: 267 ccatcaacatttgctccatacttgtcggcaaactggtaaacacccttccccttgg 321 |||||||||||||||||||| ||||| | || |||||||||||||| ||||||| Sbjct: 137 ccatcaacatttgctccatatttgtcaacgaattggtaaacaccctttcccttgg 83
>gb|AY310790.1| Nicotiana benthamiana clone 10-284 unknown mRNA Length = 373 Score = 83.8 bits (42), Expect = 6e-13 Identities = 96/115 (83%) Strand = Plus / Minus Query: 207 cctccaacataaacgtcgccacttggagaccactcttctggtgtgtatatagggctgtac 266 ||||||||||| || || || |||| |||||| || |||| |||| || |||||||| Sbjct: 133 cctccaacatanacatcaccgcttgnagaccagtcatctgtgttgtagatggggctgtat 74 Query: 267 ccatcaacatttgctccatacttgtcggcaaactggtaaacacccttccccttgg 321 |||||||||||||||||||| ||||| | || |||||||||||||| ||||||| Sbjct: 73 ccatcaacatttgctccatatttgtcaacnaattggtaaacaccctttcccttgg 19
>dbj|AP003957.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1470_H06 Length = 62794 Score = 83.8 bits (42), Expect = 6e-13 Identities = 54/58 (93%) Strand = Plus / Minus Query: 261 ctgtacccatcaacatttgctccatacttgtcggcaaactggtaaacacccttcccct 318 ||||||||||||||||||||||||||||||| || ||||||||||| |||||| |||| Sbjct: 60883 ctgtacccatcaacatttgctccatacttgttggaaaactggtaaagaccctttccct 60826 Score = 77.8 bits (39), Expect = 4e-11 Identities = 57/63 (90%) Strand = Plus / Minus Query: 316 ccttggctacccttccagacgcatcgacgccttccttgaacgccactccaccaccaggcc 375 ||||||||||||||||||| ||||| || |||||||||||| ||||||| ||| |||||| Sbjct: 60742 ccttggctacccttccagatgcatcaacaccttccttgaacaccactcctccagcaggcc 60683 Query: 376 cta 378 ||| Sbjct: 60682 cta 60680 Score = 58.0 bits (29), Expect = 4e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 136 tgtagacaagaagagcaccgcccagcagaattccagcaagagtcactgcccagagaa 192 |||||||||||| ||| ||||| | ||||||||||||||||| | ||||||||||| Sbjct: 61375 tgtagacaagaatagcgccgccaactagaattccagcaagagtgattgcccagagaa 61319 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 579 agatggtttcagagccaaagatgccatgacacaggcag 616 ||||||||||||||||| ||| ||||||||| |||||| Sbjct: 60344 agatggtttcagagccagagaagccatgacagaggcag 60307 Score = 46.1 bits (23), Expect = 0.14 Identities = 50/59 (84%) Strand = Plus / Minus Query: 207 cctccaacataaacgtcgccacttggagaccactcttctggtgtgtatatagggctgta 265 ||||||||||| || || ||| ||| |||||| |||||||| || ||||| |||||||| Sbjct: 61180 cctccaacatagacatcaccagttgaagaccattcttctggggtatatattgggctgta 61122
>emb|X04401.1|STLS1R Potato mRNA for light inducible tissue-specific ST-LS1 gene Length = 560 Score = 77.8 bits (39), Expect = 4e-11 Identities = 96/115 (83%) Strand = Plus / Minus Query: 207 cctccaacataaacgtcgccacttggagaccactcttctggtgtgtatatagggctgtac 266 ||||||||||| || || ||||||||||||||||| |||| |||| || || ||||| Sbjct: 323 cctccaacatagacatcaccacttggagaccactcatctgtgttgtagatgggactgtat 264 Query: 267 ccatcaacatttgctccatacttgtcggcaaactggtaaacacccttccccttgg 321 ||||||||||| |||||||| ||||| || | ||||| |||||||| ||||||| Sbjct: 263 ccatcaacattagctccatatttgtcaacatattggtacacaccctttcccttgg 209
>gb|AY348557.1| Trifolium pratense 10 kDa photosystem II polypeptide mRNA, complete cds Length = 584 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Minus Query: 255 atagggctgtacccatcaacatttgctccatacttgtcggcaaactggtaaacacccttc 314 ||||| ||||| ||||||||||| || ||||| ||||| ||||||||||||||||||| Sbjct: 276 ataggactgtatccatcaacattagcaccatatttgtccacaaactggtaaacacccttt 217 Query: 315 ccctt 319 ||||| Sbjct: 216 ccctt 212
>emb|Z75521.1|LESEND34 L.esculentum mRNA for photosystem II 10 kD protein Length = 540 Score = 61.9 bits (31), Expect = 2e-06 Identities = 94/115 (81%) Strand = Plus / Minus Query: 207 cctccaacataaacgtcgccacttggagaccactcttctggtgtgtatatagggctgtac 266 ||||||||||| || || |||||||||||||| || || | |||| || || ||||| Sbjct: 300 cctccaacatagacatcaccacttggagaccattcatccgtgttgtagatgggactgtat 241 Query: 267 ccatcaacatttgctccatacttgtcggcaaactggtaaacacccttccccttgg 321 ||||||||||| |||||||| ||||| || | ||||| |||||||| ||||||| Sbjct: 240 ccatcaacattagctccatatttgtcaacatattggtacacaccctttcccttgg 186
>gb|J03887.1|SPIPSBIA Spinach psbI gene encoding the 10kd polypeptide of photosystem II, complete cds Length = 590 Score = 61.9 bits (31), Expect = 2e-06 Identities = 75/87 (86%), Gaps = 2/87 (2%) Strand = Plus / Minus Query: 261 ctgtacccatcaacatttgctccatacttgtcggcaaactggtaaacaccctt-cccctt 319 ||||| ||||||||||| || ||||||||||| |||| |||||||||||||| ||| || Sbjct: 292 ctgtaaccatcaacattggcaccatacttgtcaacaaattggtaaacacccttgcccgtt 233 Query: 320 ggctacccttccagacgcatcgacgcc 346 |||| ||||||||||| ||| ||||| Sbjct: 232 ggct-tccttccagacgaatcaacgcc 207
>emb|X95987.1|LEPSIIPRE L.esculentum mRNA for 10kDa polypeptide precursor of photosystem II Length = 632 Score = 54.0 bits (27), Expect = 6e-04 Identities = 93/115 (80%) Strand = Plus / Minus Query: 207 cctccaacataaacgtcgccacttggagaccactcttctggtgtgtatatagggctgtac 266 ||||||||||| || || |||||||||||||| || || | |||| || || ||||| Sbjct: 323 cctccaacatagacatcaccacttggagaccattcatccgtgttgtagatgggactgtat 264 Query: 267 ccatcaacatttgctccatacttgtcggcaaactggtaaacacccttccccttgg 321 ||||||||||| || ||||| ||||| || | ||||| |||||||| ||||||| Sbjct: 263 ccatcaacattagccccatatttgtcaacatattggtacacaccctttcccttgg 209
>dbj|AP006696.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT17N21, TM0403, complete sequence Length = 97807 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 261 ctgtacccatcaacatttgctccatacttgtcggcaaactggtaaacacccttcccct 318 ||||| ||||||||||| || || |||||||| || |||||||||||||||| |||| Sbjct: 84239 ctgtatccatcaacattagcaccgtacttgtccacatactggtaaacaccctttccct 84296
>dbj|AP006396.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT26P21, TM0279b, complete sequence Length = 28275 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Minus Query: 261 ctgtacccatcaacatttgctccatacttgtcggcaaactggtaaacacccttcccct 318 ||||| ||||||||||| || || |||||||| || |||||||||||||||| |||| Sbjct: 14725 ctgtatccatcaacattagcaccgtacttgtccacatactggtaaacaccctttccct 14668
>emb|X04753.1|STLS1G Potato light-inducible tissue-specific ST-LS1 gene Length = 3699 Score = 48.1 bits (24), Expect = 0.035 Identities = 36/40 (90%) Strand = Plus / Minus Query: 207 cctccaacataaacgtcgccacttggagaccactcttctg 246 ||||||||||| || || ||||||||||||||||| |||| Sbjct: 3042 cctccaacatagacatcaccacttggagaccactcatctg 3003 Score = 44.1 bits (22), Expect = 0.54 Identities = 49/58 (84%) Strand = Plus / Minus Query: 261 ctgtacccatcaacatttgctccatacttgtcggcaaactggtaaacacccttcccct 318 ||||| ||||||||||| |||||||| ||||| || | ||||| |||||||| |||| Sbjct: 2892 ctgtatccatcaacattagctccatatttgtcaacatattggtacacaccctttccct 2835
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 519 cgacggcctcgccgatggtcgc 540 |||||||||||||||||||||| Sbjct: 577535 cgacggcctcgccgatggtcgc 577556
>dbj|AB090880.1| Aster tripolium mRNA for thiol protease, complete cds Length = 910 Score = 44.1 bits (22), Expect = 0.54 Identities = 34/38 (89%) Strand = Plus / Minus Query: 282 ccatacttgtcggcaaactggtaaacacccttcccctt 319 ||||||||||| |||| ||||| |||||||||||||| Sbjct: 355 ccatacttgtcaacaaattggtagacacccttcccctt 318
>gb|AC139131.19| Mus musculus chromosome 7, clone RP23-301N20, complete sequence Length = 230772 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 394 acacacaaaaattcatgtgaa 414 ||||||||||||||||||||| Sbjct: 199285 acacacaaaaattcatgtgaa 199305
>ref|NM_106555.2| Arabidopsis thaliana unknown protein AT1G79040 mRNA, complete cds Length = 647 Score = 42.1 bits (21), Expect = 2.1 Identities = 51/61 (83%) Strand = Plus / Minus Query: 250 tgtatatagggctgtacccatcaacatttgctccatacttgtcggcaaactggtaaacac 309 |||| ||||| ||||| ||||| || || ||||||||||||||| | ||| |||||||| Sbjct: 353 tgtaaataggactgtatccatcgacgttagctccatacttgtcgacgtacttgtaaacac 294 Query: 310 c 310 | Sbjct: 293 c 293
>gb|AC168062.3| Mus musculus BAC clone RP23-191D8 from chromosome 14, complete sequence Length = 174822 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 442 catatacatgtatatgtatac 462 ||||||||||||||||||||| Sbjct: 98217 catatacatgtatatgtatac 98237
>gb|AC154761.2| Mus musculus BAC clone RP24-416E4 from chromosome 17, complete sequence Length = 169027 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 407 catgtgaaggtggttctcaac 427 ||||||||||||||||||||| Sbjct: 65652 catgtgaaggtggttctcaac 65672
>gb|AC154627.2| Mus musculus BAC clone RP23-312J2 from chromosome 14, complete sequence Length = 225640 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 442 catatacatgtatatgtatac 462 ||||||||||||||||||||| Sbjct: 219007 catatacatgtatatgtatac 218987
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 488 ccttcttcgccttcttggcca 508 ||||||||||||||||||||| Sbjct: 2184158 ccttcttcgccttcttggcca 2184178
>gb|AC114404.12| Mus musculus chromosome 7, clone RP24-350D24, complete sequence Length = 188585 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 394 acacacaaaaattcatgtgaa 414 ||||||||||||||||||||| Sbjct: 27453 acacacaaaaattcatgtgaa 27473
>gb|AC110622.6| Mus musculus BAC clone RP23-204H3 from chromosome 8, complete sequence Length = 190632 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 442 catatacatgtatatgtatac 462 ||||||||||||||||||||| Sbjct: 63917 catatacatgtatatgtatac 63937
>gb|AC127577.4| Mus musculus BAC clone RP24-243K23 from chromosome 6, complete sequence Length = 154273 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 441 ccatatacatgtatatgtata 461 ||||||||||||||||||||| Sbjct: 92651 ccatatacatgtatatgtata 92671
>gb|AC137677.24| Mus musculus chromosome 1, clone RP23-257D12, complete sequence Length = 189162 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 442 catatacatgtatatgtatac 462 ||||||||||||||||||||| Sbjct: 72948 catatacatgtatatgtatac 72968
>emb|AL031428.9|HS184J9 Human DNA sequence from clone RP1-184J9 on chromosome 1p35.1-36.12 Contains the 5' end of a novel gene, the gene for a novel protein (KIAA0601), a novel gene and the 5' end of the LUZP1 gene for leucine zipper protein 1, complete sequence Length = 100951 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 442 catatacatgtatatgtatac 462 ||||||||||||||||||||| Sbjct: 81600 catatacatgtatatgtatac 81620
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 488 ccttcttcgccttcttggcca 508 ||||||||||||||||||||| Sbjct: 2523514 ccttcttcgccttcttggcca 2523534
>emb|AL360170.23| Human DNA sequence from clone RP11-131N13 on chromosome 10 Contains the 5' end of the gene for Ste20-related serine/threonine kinase (SLK) and a CpG island, complete sequence Length = 60252 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 442 catatacatgtatatgtatac 462 ||||||||||||||||||||| Sbjct: 36130 catatacatgtatatgtatac 36110
>emb|AL162390.9| Human DNA sequence from clone RP11-386J22 on chromosome 9 Contains the SMC5L1 gene for SMC5 structural maintenance of chromosomes 5-like 1 (yeast) (SMC5, KIAA0594), the BTEB1 gene for basic transcription element binding protein 1 (BTEB, KLF9) and three CpG islands, complete sequence Length = 182427 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 442 catatacatgtatatgtatac 462 ||||||||||||||||||||| Sbjct: 174971 catatacatgtatatgtatac 174951 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 174956 catatacatgtatatgtata 174975
>gb|AY096544.1| Arabidopsis thaliana putative photosystem II polypeptide (At1g79040) mRNA, complete cds Length = 454 Score = 42.1 bits (21), Expect = 2.1 Identities = 51/61 (83%) Strand = Plus / Minus Query: 250 tgtatatagggctgtacccatcaacatttgctccatacttgtcggcaaactggtaaacac 309 |||| ||||| ||||| ||||| || || ||||||||||||||| | ||| |||||||| Sbjct: 286 tgtaaataggactgtatccatcgacgttagctccatacttgtcgacgtacttgtaaacac 227 Query: 310 c 310 | Sbjct: 226 c 226
>gb|AY070103.1| Arabidopsis thaliana putative photosystem II polypeptide protein (At1g79040) mRNA, complete cds Length = 645 Score = 42.1 bits (21), Expect = 2.1 Identities = 51/61 (83%) Strand = Plus / Minus Query: 250 tgtatatagggctgtacccatcaacatttgctccatacttgtcggcaaactggtaaacac 309 |||| ||||| ||||| ||||| || || ||||||||||||||| | ||| |||||||| Sbjct: 336 tgtaaataggactgtatccatcgacgttagctccatacttgtcgacgtacttgtaaacac 277 Query: 310 c 310 | Sbjct: 276 c 276
>gb|AC092864.5| Homo sapiens 12p BAC RP11-653A22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 59892 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 391 cacacacacaaaaattcatgt 411 ||||||||||||||||||||| Sbjct: 44555 cacacacacaaaaattcatgt 44535
>gb|AF035554.1|AF035554 Pisaster ochraceus protein kinase C-related kinase (PRK2) mRNA, partial cds Length = 2892 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 212 aacataaacgtcgccacttgg 232 ||||||||||||||||||||| Sbjct: 1465 aacataaacgtcgccacttgg 1485
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 442 catatacatgtatatgtatac 462 ||||||||||||||||||||| Sbjct: 40289842 catatacatgtatatgtatac 40289862 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 442 catatacatgtatatgtatac 462 ||||||||||||||||||||| Sbjct: 40289808 catatacatgtatatgtatac 40289828 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 40289857 catatacatgtatatgtata 40289838 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 40289823 catatacatgtatatgtata 40289804 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 21830117 catatacatgtatatgtata 21830136
>emb|BX815694.1|CNS0ABGL Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS85ZA04 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 580 Score = 42.1 bits (21), Expect = 2.1 Identities = 51/61 (83%) Strand = Plus / Minus Query: 250 tgtatatagggctgtacccatcaacatttgctccatacttgtcggcaaactggtaaacac 309 |||| ||||| ||||| ||||| || || ||||||||||||||| | ||| |||||||| Sbjct: 319 tgtaaataggactgtatccatcgacgttagctccatacttgtcgacgtacttgtaaacac 260 Query: 310 c 310 | Sbjct: 259 c 259
>emb|BX813377.1|CNS0AC7S Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB13ZE07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 580 Score = 42.1 bits (21), Expect = 2.1 Identities = 51/61 (83%) Strand = Plus / Minus Query: 250 tgtatatagggctgtacccatcaacatttgctccatacttgtcggcaaactggtaaacac 309 |||| ||||| ||||| ||||| || || ||||||||||||||| | ||| |||||||| Sbjct: 319 tgtaaataggactgtatccatcgacgttagctccatacttgtcgacgtacttgtaaacac 260 Query: 310 c 310 | Sbjct: 259 c 259
>emb|BX813545.1|CNS0AC1I Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB23ZD11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 576 Score = 42.1 bits (21), Expect = 2.1 Identities = 51/61 (83%) Strand = Plus / Minus Query: 250 tgtatatagggctgtacccatcaacatttgctccatacttgtcggcaaactggtaaacac 309 |||| ||||| ||||| ||||| || || ||||||||||||||| | ||| |||||||| Sbjct: 315 tgtaaataggactgtatccatcgacgttagctccatacttgtcgacgtacttgtaaacac 256 Query: 310 c 310 | Sbjct: 255 c 255
>emb|BX815389.1|CNS0ABFG Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS56ZH04 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 580 Score = 42.1 bits (21), Expect = 2.1 Identities = 51/61 (83%) Strand = Plus / Minus Query: 250 tgtatatagggctgtacccatcaacatttgctccatacttgtcggcaaactggtaaacac 309 |||| ||||| ||||| ||||| || || ||||||||||||||| | ||| |||||||| Sbjct: 319 tgtaaataggactgtatccatcgacgttagctccatacttgtcgacgtacttgtaaacac 260 Query: 310 c 310 | Sbjct: 259 c 259
>emb|BX818517.1|CNS0AB2P Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL83ZE09 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 579 Score = 42.1 bits (21), Expect = 2.1 Identities = 51/61 (83%) Strand = Plus / Minus Query: 250 tgtatatagggctgtacccatcaacatttgctccatacttgtcggcaaactggtaaacac 309 |||| ||||| ||||| ||||| || || ||||||||||||||| | ||| |||||||| Sbjct: 318 tgtaaataggactgtatccatcgacgttagctccatacttgtcgacgtacttgtaaacac 259 Query: 310 c 310 | Sbjct: 258 c 258
>emb|BX817507.1|CNS0AAZC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL27ZF07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 588 Score = 42.1 bits (21), Expect = 2.1 Identities = 51/61 (83%) Strand = Plus / Minus Query: 250 tgtatatagggctgtacccatcaacatttgctccatacttgtcggcaaactggtaaacac 309 |||| ||||| ||||| ||||| || || ||||||||||||||| | ||| |||||||| Sbjct: 321 tgtaaataggactgtatccatcgacgttagctccatacttgtcgacgtacttgtaaacac 262 Query: 310 c 310 | Sbjct: 261 c 261
>dbj|AP006843.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1793G04 Length = 156714 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 442 catatacatgtatatgtatac 462 ||||||||||||||||||||| Sbjct: 155620 catatacatgtatatgtatac 155640 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 442 catatacatgtatatgtatac 462 ||||||||||||||||||||| Sbjct: 155586 catatacatgtatatgtatac 155606 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 155635 catatacatgtatatgtata 155616 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 155601 catatacatgtatatgtata 155582
>gb|AC006156.5|AC006156 Homo sapiens BAC clone RP11-344D2 from Y, complete sequence Length = 112581 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 442 catatacatgtatatgtatac 462 ||||||||||||||||||||| Sbjct: 111878 catatacatgtatatgtatac 111858
>gb|AY084512.1| Arabidopsis thaliana clone 110067 mRNA, complete sequence Length = 611 Score = 42.1 bits (21), Expect = 2.1 Identities = 51/61 (83%) Strand = Plus / Minus Query: 250 tgtatatagggctgtacccatcaacatttgctccatacttgtcggcaaactggtaaacac 309 |||| ||||| ||||| ||||| || || ||||||||||||||| | ||| |||||||| Sbjct: 353 tgtaaataggactgtatccatcgacgttagctccatacttgtcgacgtacttgtaaacac 294 Query: 310 c 310 | Sbjct: 293 c 293
>dbj|BS000067.1| Pan troglodytes chromosome 22 clone:RP43-053F13, map 22, complete sequences Length = 74098 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 442 catatacatgtatatgtatac 462 ||||||||||||||||||||| Sbjct: 23502 catatacatgtatatgtatac 23482
>emb|AJ293729.1|ATH293729 Arabidopsis thaliana partial mRNA for 60S ribosomal protein L24 (RL24 gene) Length = 1310 Score = 42.1 bits (21), Expect = 2.1 Identities = 51/61 (83%) Strand = Plus / Minus Query: 250 tgtatatagggctgtacccatcaacatttgctccatacttgtcggcaaactggtaaacac 309 |||| ||||| ||||| ||||| || || ||||||||||||||| | ||| |||||||| Sbjct: 1028 tgtaaataggactgtatccatcgacgttagctccatacttgtcgacgtacttgtaaacac 969 Query: 310 c 310 | Sbjct: 968 c 968
>gb|AF078129.1|HB205SIC1 Plasmodium knowlesi from Malaysia 205 kDa Pk1(B+)1+ SICAvar antigen (SICAvar-HB205) gene, exons 1-3 Length = 3156 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 442 catatacatgtatatgtatac 462 ||||||||||||||||||||| Sbjct: 1477 catatacatgtatatgtatac 1497 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 1492 catatacatgtatatgtata 1473 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 974 catatacatgtatatgtata 993
>dbj|AP001680.1| Homo sapiens genomic DNA, chromosome 21q, section 24/105 Length = 340000 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 442 catatacatgtatatgtatac 462 ||||||||||||||||||||| Sbjct: 314884 catatacatgtatatgtatac 314864
>gb|AC116863.6| Mus musculus chromosome 19, clone RP24-408G9, complete sequence Length = 171621 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 442 catatacatgtatatgtatac 462 ||||||||||||||||||||| Sbjct: 43317 catatacatgtatatgtatac 43297
>gb|AC162449.4| Mus musculus chromosome 1, clone RP23-424E19, complete sequence Length = 184609 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 442 catatacatgtatatgtatac 462 ||||||||||||||||||||| Sbjct: 29462 catatacatgtatatgtatac 29442
>gb|L31936.1|BNABIF11G Brassica campestris ssp. pekinensis (clone bif11) photosystem II 10kDa polypeptide mRNA, complete cds Length = 551 Score = 42.1 bits (21), Expect = 2.1 Identities = 42/49 (85%) Strand = Plus / Minus Query: 250 tgtatatagggctgtacccatcaacatttgctccatacttgtcggcaaa 298 |||| ||||| ||||| |||||||| || || |||||||||||| |||| Sbjct: 301 tgtagataggactgtatccatcaacgttcgcaccatacttgtcgacaaa 253
>gb|AC125793.2| Homo sapiens chromosome 16 clone CTD-3253I12, complete sequence Length = 117647 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 442 catatacatgtatatgtatac 462 ||||||||||||||||||||| Sbjct: 112667 catatacatgtatatgtatac 112687 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 112682 catatacatgtatatgtata 112663
>dbj|AP001136.1| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2, clone:B738P18, LL56-APP region, complete sequence Length = 88499 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 442 catatacatgtatatgtatac 462 ||||||||||||||||||||| Sbjct: 17267 catatacatgtatatgtatac 17247
>gb|AC116825.23| Mus musculus chromosome 8, clone RP24-367H14, complete sequence Length = 182808 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 443 atatacatgtatatgtatac 462 |||||||||||||||||||| Sbjct: 109166 atatacatgtatatgtatac 109185
>gb|AC133456.11| Mus musculus chromosome 5, clone RP24-465G18, complete sequence Length = 162210 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 90497 catatacatgtatatgtata 90516 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 90512 catatacatgtatatgtata 90493
>gb|AC120391.6| Mus musculus chromosome 1, clone RP24-310B3, complete sequence Length = 172679 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 442 catatacatgtatatgtataccca 465 ||||| |||||||||||||||||| Sbjct: 61587 catattcatgtatatgtataccca 61610
>gb|AC118200.8| Mus musculus chromosome 5, clone RP23-330E5, complete sequence Length = 208710 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 124719 catatacatgtatatgtata 124700
>gb|AC108914.8| Mus musculus chromosome 1, clone RP23-435E15, complete sequence Length = 212494 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 443 atatacatgtatatgtatac 462 |||||||||||||||||||| Sbjct: 16784 atatacatgtatatgtatac 16803
>gb|CP000153.1| Thiomicrospira denitrificans ATCC 33889, complete genome Length = 2201561 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 catcaacatttgctccatac 287 |||||||||||||||||||| Sbjct: 1176164 catcaacatttgctccatac 1176145
>gb|AC119957.9| Mus musculus chromosome 17, clone RP24-466G23, complete sequence Length = 153209 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 443 atatacatgtatatgtatac 462 |||||||||||||||||||| Sbjct: 15612 atatacatgtatatgtatac 15593
>gb|AC132830.12| Mus musculus chromosome 1, clone RP24-566B6, complete sequence Length = 205300 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 cactcttctggtgtgtatat 256 |||||||||||||||||||| Sbjct: 143554 cactcttctggtgtgtatat 143573
>gb|AC166830.3| Mus musculus BAC clone RP23-246O1 from chromosome 13, complete sequence Length = 213487 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 75220 catatacatgtatatgtata 75239
>gb|AC169511.1| Mus musculus BAC clone RP23-81P24 from chromosome 14, complete sequence Length = 252587 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 441 ccatatacatgtatatgtat 460 |||||||||||||||||||| Sbjct: 152588 ccatatacatgtatatgtat 152569
>gb|AC113547.27| Mus musculus chromosome 12, clone RP23-263J2, complete sequence Length = 197242 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 agtactgtagacaagaagag 150 |||||||||||||||||||| Sbjct: 4569 agtactgtagacaagaagag 4550
>gb|AC101687.11| Mus musculus chromosome 8, clone RP23-205D7, complete sequence Length = 185997 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 67134 catatacatgtatatgtata 67115
>gb|AC005740.1| Homo sapiens chromosome 5p, BAC clone 50g21 (LBNL H154), complete sequence Length = 186780 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 42496 catatacatgtatatgtata 42515 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 42511 catatacatgtatatgtata 42492
>gb|AC163622.4| Mus musculus BAC clone RP24-566G6 from chromosome y, complete sequence Length = 166756 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 124306 catatacatgtatatgtata 124325 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 124321 catatacatgtatatgtata 124302
>gb|AC136905.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0064E13, complete sequence Length = 150158 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 341 gacgccttccttgaacgcca 360 |||||||||||||||||||| Sbjct: 82024 gacgccttccttgaacgcca 82005
>gb|AC102751.14| Mus musculus chromosome 19, clone RP24-531N3, complete sequence Length = 178150 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 36336 catatacatgtatatgtata 36317
>gb|AC099572.12| Mus musculus chromosome 15, clone RP23-16A17, complete sequence Length = 200229 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 443 atatacatgtatatgtatac 462 |||||||||||||||||||| Sbjct: 174589 atatacatgtatatgtatac 174608
>gb|AC009341.7| Drosophila melanogaster clone BACR07G13, complete sequence Length = 183723 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 440 gccatatacatgtatatgta 459 |||||||||||||||||||| Sbjct: 78643 gccatatacatgtatatgta 78662
>gb|AC102825.6| Mus musculus chromosome 15, clone RP24-227B12, complete sequence Length = 153145 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 acacccttccccttggctac 325 |||||||||||||||||||| Sbjct: 35663 acacccttccccttggctac 35644
>gb|AC141477.4| Mus musculus BAC clone RP23-386J14 from chromosome 10, complete sequence Length = 213720 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 38081 catatacatgtatatgtata 38100
>gb|AC140187.3| Mus musculus BAC clone RP24-364N20 from chromosome Y, complete sequence Length = 151358 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 132350 catatacatgtatatgtata 132369 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 132365 catatacatgtatatgtata 132346
>gb|AC125156.3| Mus musculus BAC clone RP24-386H5 from chromosome 18, complete sequence Length = 189554 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 182651 catatacatgtatatgtata 182632
>gb|AC134595.3| Mus musculus BAC clone RP23-388E14 from chromosome 15, complete sequence Length = 189263 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 134398 catatacatgtatatgtata 134379
>gb|AC139847.3| Mus musculus BAC clone RP23-387P21 from chromosome 3, complete sequence Length = 203824 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 443 atatacatgtatatgtatac 462 |||||||||||||||||||| Sbjct: 69094 atatacatgtatatgtatac 69113
>gb|AC136956.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0038B22, complete sequence Length = 177557 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 341 gacgccttccttgaacgcca 360 |||||||||||||||||||| Sbjct: 117754 gacgccttccttgaacgcca 117735
>gb|DP000012.1| Macropus eugenii target 1 genomic scaffold Length = 1996640 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 1591617 catatacatgtatatgtata 1591636 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 1591632 catatacatgtatatgtata 1591613
>gb|AC161586.5| Mus musculus BAC clone RP24-457J18 from chromosome 13, complete sequence Length = 146936 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 443 atatacatgtatatgtatac 462 |||||||||||||||||||| Sbjct: 32441 atatacatgtatatgtatac 32460
>gb|AC118540.15| Mus musculus strain 129/SvJ clone mgs1-169d12 map 3, complete sequence Length = 191014 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 128845 catatacatgtatatgtata 128826
>gb|AC124467.3| Mus musculus BAC clone RP24-163L18 from chromosome 15, complete sequence Length = 169366 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 168830 catatacatgtatatgtata 168849
>gb|AC107865.7| Mus musculus chromosome 1, clone RP23-389C9, complete sequence Length = 204959 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 443 atatacatgtatatgtatac 462 |||||||||||||||||||| Sbjct: 203021 atatacatgtatatgtatac 203040
>gb|AC147147.2| Pan troglodytes BAC clone CH251-230I19 from Y, complete sequence Length = 143402 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 23652 catatacatgtatatgtata 23671
>gb|AC127699.4| Mus musculus BAC clone RP24-114P21 from chromosome 7, complete sequence Length = 152811 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 443 atatacatgtatatgtatac 462 |||||||||||||||||||| Sbjct: 65060 atatacatgtatatgtatac 65041
>emb|CT009738.8| Mouse DNA sequence from clone RP23-217H9 on chromosome 12, complete sequence Length = 209619 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 97132 catatacatgtatatgtata 97151 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 97147 catatacatgtatatgtata 97128
>gb|AC146452.3| Pan troglodytes BAC clone CH251-483N3 from Y, complete sequence Length = 215209 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 33755 catatacatgtatatgtata 33736
>gb|AC147477.1| Pan troglodytes BAC clone CH251-483E9 from Y, complete sequence Length = 213500 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 24 atttgtatccttacatatgtcctg 47 |||||||||||| ||||||||||| Sbjct: 145129 atttgtatcctttcatatgtcctg 145152
>gb|AC122450.4| Mus musculus BAC clone RP24-249K4 from chromosome 1, complete sequence Length = 154695 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 104110 catatacatgtatatgtata 104129
>gb|AC134545.5| Mus musculus BAC clone RP24-470H2 from chromosome 18, complete sequence Length = 155887 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 ccagcagaattccagcaaga 176 |||||||||||||||||||| Sbjct: 25861 ccagcagaattccagcaaga 25880
>gb|AC128672.4| Mus musculus BAC clone RP23-136O15 from chromosome 18, complete sequence Length = 215137 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 ccagcagaattccagcaaga 176 |||||||||||||||||||| Sbjct: 7108 ccagcagaattccagcaaga 7089
>gb|AC124524.3| Mus musculus BAC clone RP23-402C9 from chromosome 14, complete sequence Length = 213751 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 78204 catatacatgtatatgtata 78223
>gb|AC122878.4| Mus musculus BAC clone RP23-116F15 from chromosome 14, complete sequence Length = 226611 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 137202 catatacatgtatatgtata 137221
>gb|AC004381.1|HUAC004381 Homo sapiens Chromosome 16 BAC clone CIT987SK-44M2, complete sequence Length = 213541 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 29072 catatacatgtatatgtata 29053
>gb|AF441733.2| Mus musculus clone RP23-225M6 45S pre-ribosomal RNA gene, partial sequence; and intergenic spacer, partial sequence Length = 31129 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 5362 catatacatgtatatgtata 5381
>gb|AC127283.2| Mus musculus BAC clone RP23-323E20 from chromosome 3, complete sequence Length = 210014 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 157212 catatacatgtatatgtata 157193
>gb|AC122422.4| Mus musculus BAC clone RP24-169N11 from chromosome 17, complete sequence Length = 181626 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 443 atatacatgtatatgtatac 462 |||||||||||||||||||| Sbjct: 68319 atatacatgtatatgtatac 68338
>gb|AC090042.2| Homo sapiens chromosome 3 clone RP11-21B12 map 3p, complete sequence Length = 167559 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 443 atatacatgtatatgtatac 462 |||||||||||||||||||| Sbjct: 154418 atatacatgtatatgtatac 154437
>gb|AC125050.6| Mus musculus BAC clone RP23-372I18 from chromosome 7, complete sequence Length = 199810 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 566 acagaggagaggaagatggt 585 |||||||||||||||||||| Sbjct: 84446 acagaggagaggaagatggt 84465
>gb|AC122872.3| Mus musculus BAC clone RP23-110E8 from 1, complete sequence Length = 190644 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 67867 catatacatgtatatgtata 67886
>gb|AC122841.4| Mus musculus BAC clone RP23-194E5 from 3, complete sequence Length = 200088 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 98068 catatacatgtatatgtata 98049
>gb|AC127326.4| Mus musculus BAC clone RP23-251C4 from 8, complete sequence Length = 207802 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 140766 catatacatgtatatgtata 140785 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 140781 catatacatgtatatgtata 140762
>gb|AC125195.4| Mus musculus BAC clone RP23-246M2 from 2, complete sequence Length = 195041 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 443 atatacatgtatatgtatac 462 |||||||||||||||||||| Sbjct: 13190 atatacatgtatatgtatac 13171
>gb|AC121583.3| Mus musculus BAC clone RP23-259K16 from 13, complete sequence Length = 207129 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 443 atatacatgtatatgtatac 462 |||||||||||||||||||| Sbjct: 36683 atatacatgtatatgtatac 36664
>gb|AC126695.4| Mus musculus BAC clone RP23-313D2 from 18, complete sequence Length = 171427 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 155223 catatacatgtatatgtata 155242
>gb|AF503579.1| Pan troglodytes chromosome 19p, 10.5 kb SmaI fragment of RP43-141Q35, orientation p-telomer to centromere, complete sequence Length = 10497 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 6362 catatacatgtatatgtata 6381
>gb|AC116329.3| Mus musculus BAC clone RP24-290C19 from 5, complete sequence Length = 170072 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 11712 catatacatgtatatgtata 11693
>gb|AC121576.2| Mus musculus BAC clone RP23-244D21 from 18, complete sequence Length = 158243 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 77215 catatacatgtatatgtata 77234
>gb|AC113596.8| Mus musculus chromosome 5, clone RP23-374B20, complete sequence Length = 203500 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 6358 catatacatgtatatgtata 6377
>gb|AC108392.17| Mus musculus chromosome 10, clone RP23-121B23, complete sequence Length = 207763 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 53947 catatacatgtatatgtata 53928
>gb|AC159814.2| Mus musculus BAC clone RP23-389H15 from chromosome 12, complete sequence Length = 209280 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 166810 catatacatgtatatgtata 166829 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 166825 catatacatgtatatgtata 166806
>gb|AC006507.21| Mus musculus strain 129S6/SvEvTac clone rp21-580p20 map 10, complete sequence Length = 185664 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 45978 catatacatgtatatgtata 45959
>gb|AC140851.12| Mus musculus strain C57BL/6J clone rp23-358m4, complete sequence Length = 214913 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 33404 catatacatgtatatgtata 33385
>emb|AL935059.4| Human DNA sequence from clone RP11-691H16 on chromosome X Contains a novel gene, complete sequence Length = 31134 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 443 atatacatgtatatgtatac 462 |||||||||||||||||||| Sbjct: 9284 atatacatgtatatgtatac 9265 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 443 atatacatgtatatgtatac 462 |||||||||||||||||||| Sbjct: 9246 atatacatgtatatgtatac 9227 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 443 atatacatgtatatgtatac 462 |||||||||||||||||||| Sbjct: 9216 atatacatgtatatgtatac 9197 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 443 atatacatgtatatgtatac 462 |||||||||||||||||||| Sbjct: 9178 atatacatgtatatgtatac 9159 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 443 atatacatgtatatgtatac 462 |||||||||||||||||||| Sbjct: 9140 atatacatgtatatgtatac 9121
>emb|AL583860.7| Human DNA sequence from clone RP11-16P8 on chromosome 10 Contains the 5' end of a novel gene, complete sequence Length = 87845 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 74494 catatacatgtatatgtata 74513 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 74509 catatacatgtatatgtata 74490
>emb|AL355810.10| Human DNA sequence from clone RP11-40E6 on chromosome 13, complete sequence Length = 103749 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 443 atatacatgtatatgtatac 462 |||||||||||||||||||| Sbjct: 87690 atatacatgtatatgtatac 87671
>emb|AL355588.8| Human DNA sequence from clone RP11-515J13 on chromosome 9, complete sequence Length = 123274 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 443 atatacatgtatatgtatac 462 |||||||||||||||||||| Sbjct: 102878 atatacatgtatatgtatac 102897
>emb|AL160411.25| Human DNA sequence from clone RP4-726N1 on chromosome 20 Contains the 5' end of the ZNF339 gene for zinc finger protein 339, a novel gene, the RPL15P1 gene for ribosomal protein L15 pseudogene 1 and a CpG island, complete sequence Length = 100834 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 31300 catatacatgtatatgtata 31319
>emb|AL138920.11| Human DNA sequence from clone RP11-148B2 on chromosome 10 Contains the RAB18 gene for RAB18, member RAS oncogene family and a CpG island, complete sequence Length = 168217 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 443 atatacatgtatatgtatac 462 |||||||||||||||||||| Sbjct: 27487 atatacatgtatatgtatac 27506 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 443 atatacatgtatatgtatac 462 |||||||||||||||||||| Sbjct: 27406 atatacatgtatatgtatac 27425
>emb|AL136373.21| Human DNA sequence from clone RP11-49P4 on chromosome 1p32.2-33 Contains two novel genes (FLJ40412, FLJ32011), the MKNK1 gene for MAP kinase-interacting serine/threonine kinase 1, the gene for MOB3C protein (MOB3C) and the 3' end of the ATPAF1 gene for ATP synthase mitochondrial F1 complex assembly factor 1, complete sequence Length = 121112 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 440 gccatatacatgtatatgtatacc 463 ||||||||||| |||||||||||| Sbjct: 12168 gccatatacatttatatgtatacc 12145
>gb|AC011401.9| Homo sapiens chromosome 5 clone CTB-35K5, complete sequence Length = 199275 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 185088 catatacatgtatatgtata 185107 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 185103 catatacatgtatatgtata 185084
>emb|AL121601.13|HSDJ315G1 Human DNA sequence from clone RP1-315G1 on chromosome Xq24-25 Contains the 3' end of the BIRC4 gene for baculoviral IAP repeat-containing 4, two novel genes, a par-6 partitioning defective 6 homolog beta (C. elegans) (PARD6B) pseudogene, the 5' end of the STAG2 gene for stromal antigen 2 and a CpG island, complete sequence Length = 133391 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 390 tcacacacacaaaaattcat 409 |||||||||||||||||||| Sbjct: 73339 tcacacacacaaaaattcat 73358
>emb|AL121902.13|HSBA80K6 Human DNA sequence from clone RP11-80K6 on chromosome 20 Contains a novel gene, the RPL36P1 gene for ribosomal protein L36 pseudogene 1, the 5' end of the gene for a novel protein (FLJ33887) and a CpG island, complete sequence Length = 170740 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 443 atatacatgtatatgtatac 462 |||||||||||||||||||| Sbjct: 57124 atatacatgtatatgtatac 57105
>emb|AL079342.17|HSDJ72A23 Human DNA sequence from clone RP1-72A23 on chromosome 6 Contains an adaptor-related (clathrin-associated) protein complex 4, sigma 1 subunit (AP4A1) pseudogene, a novel pseudogene, the 5' end of the RNGTT gene for RNA guanylyltransferase and 5'-phosphatase (mRNA capping enzyme, CAP1A) and two CpG islands, complete sequence Length = 150541 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 141670 catatacatgtatatgtata 141689
>emb|AL031661.28|HS404H4 Human DNA sequence from clone RP3-404H4 on chromosome 20q12-13.13 Contains STSs and GSSs, complete sequence Length = 155867 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 96325 catatacatgtatatgtata 96344
>gb|AC128707.2| Homo sapiens 12 BAC RP11-38F22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 121538 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 102293 catatacatgtatatgtata 102312 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 102308 catatacatgtatatgtata 102289 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 102265 catatacatgtatatgtata 102284 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 102280 catatacatgtatatgtata 102261 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 102237 catatacatgtatatgtata 102256 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 102252 catatacatgtatatgtata 102233 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 102209 catatacatgtatatgtata 102228 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 102224 catatacatgtatatgtata 102205 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 102181 catatacatgtatatgtata 102200 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 102196 catatacatgtatatgtata 102177
>gb|AC112026.4| Rattus norvegicus 19 BAC CH230-105L11 (Children's Hospital Oakland Research Institute) complete sequence Length = 237539 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 63008 catatacatgtatatgtata 62989
>emb|AL022324.1|HS246H3 Human DNA sequence from clone CTA-246H3 on chromosome 22, complete sequence Length = 140679 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 4620 catatacatgtatatgtata 4601
>emb|Z99122.2|BSUB0019 Bacillus subtilis complete genome (section 19 of 21): from 3608981 to 3809670 Length = 200690 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 ttggtttgctgcacataggc 111 |||||||||||||||||||| Sbjct: 125094 ttggtttgctgcacataggc 125075
>emb|Z92952.1|BSZ92952 B.subtilis ywq[A,B,C,D,E,F,G,H,I,J,K,L,M,N,O] genes Length = 14047 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 ttggtttgctgcacataggc 111 |||||||||||||||||||| Sbjct: 1312 ttggtttgctgcacataggc 1331
>emb|AL663049.8| Mouse DNA sequence from clone RP23-198N8 on chromosome 11 Contains the Mor2 gene for soluble malate dehydrogenase, a novel gene, a phosphoglycerate mutase (Pgam) pseudogene and a CpG island, complete sequence Length = 203295 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 443 atatacatgtatatgtatac 462 |||||||||||||||||||| Sbjct: 133263 atatacatgtatatgtatac 133282
>gb|AC100400.10| Mus musculus chromosome 15, clone RP23-134E16, complete sequence Length = 211743 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 124659 catatacatgtatatgtata 124678
>gb|AC153539.7| Mus musculus 10 BAC RP23-245C19 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 230854 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 106261 catatacatgtatatgtata 106242
>emb|AL671970.9| Mouse DNA sequence from clone RP23-152A20 on chromosome 4, complete sequence Length = 166569 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 443 atatacatgtatatgtatac 462 |||||||||||||||||||| Sbjct: 23291 atatacatgtatatgtatac 23310
>emb|BX005114.6| Mouse DNA sequence from clone RP24-199F23 on chromosome 11 no genes, complete sequence Length = 135695 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 97983 catatacatgtatatgtata 97964
>emb|AL805927.4| Mouse DNA sequence from clone RP24-221D22 on chromosome 4 Contains a novel pseudogene, complete sequence Length = 141669 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 22915 catatacatgtatatgtata 22896
>emb|CR858827.1| Pongo pygmaeus mRNA; cDNA DKFZp469O2110 (from clone DKFZp469O2110) Length = 6078 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 442 catatacatgtatatgtataccca 465 |||||| ||||||||||||||||| Sbjct: 5455 catatatatgtatatgtataccca 5478
>gb|AC015994.13| Homo sapiens, clone RP11-328A22, complete sequence Length = 163186 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 14279 catatacatgtatatgtata 14298 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 14294 catatacatgtatatgtata 14275
>gb|AC107909.5| Homo sapiens chromosome 8, clone CTD-2340D6, complete sequence Length = 149001 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 441 ccatatacatgtatatgtat 460 |||||||||||||||||||| Sbjct: 22937 ccatatacatgtatatgtat 22956
>gb|AC156557.8| Mus musculus chromosome 7, clone RP23-321F8, complete sequence Length = 209053 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 443 atatacatgtatatgtatac 462 |||||||||||||||||||| Sbjct: 156889 atatacatgtatatgtatac 156908
>gb|AC151827.5| Mus musculus BAC clone RP24-453P17 from chromosome y, complete sequence Length = 166980 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 27650 catatacatgtatatgtata 27669 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 27665 catatacatgtatatgtata 27646
>gb|AC104986.5| Homo sapiens chromosome 8, clone RP11-410L14, complete sequence Length = 153411 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 441 ccatatacatgtatatgtat 460 |||||||||||||||||||| Sbjct: 9908 ccatatacatgtatatgtat 9889
>dbj|BS000618.1| Pan troglodytes chromosome Y clone:PTB-428B15, complete sequences Length = 103410 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 24 atttgtatccttacatatgtcctg 47 |||||||||||| ||||||||||| Sbjct: 42122 atttgtatcctttcatatgtcctg 42099
>dbj|BS000574.1| Pan troglodytes chromosome Y clone:PTB-031D23, complete sequences Length = 142928 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 39201 catatacatgtatatgtata 39220
>gb|AC023916.10| Homo sapiens chromosome , clone RP11-12L20, complete sequence Length = 132446 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 31319 catatacatgtatatgtata 31300
>gb|AC092952.4| Homo sapiens 3 BAC RP11-332P22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 168234 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 435 attacgccatatacatgtatatgtatac 462 ||||| ||||||||||| |||||||||| Sbjct: 127248 attactccatatacatgcatatgtatac 127275
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence Length = 23952694 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 16183737 catatacatgtatatgtata 16183718 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 24 atttgtatccttacatatgtcctg 47 |||||||||||| ||||||||||| Sbjct: 14902130 atttgtatcctttcatatgtcctg 14902153
>gb|AC061999.6| Homo sapiens chromosome 11, clone RP11-545D22, complete sequence Length = 182549 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 443 atatacatgtatatgtatac 462 |||||||||||||||||||| Sbjct: 86621 atatacatgtatatgtatac 86640
>gb|AC078862.14| Homo sapiens 12 BAC RP11-139B1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 57000 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 400 aaaaattcatgtgaaggtgg 419 |||||||||||||||||||| Sbjct: 23089 aaaaattcatgtgaaggtgg 23108
>gb|AC093768.3| Homo sapiens BAC clone RP11-113G13 from 4, complete sequence Length = 187624 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 taaacacccttccccttggc 322 |||||||||||||||||||| Sbjct: 65315 taaacacccttccccttggc 65296
>gb|AC097492.6| Homo sapiens BAC clone RP11-264A4 from 4, complete sequence Length = 142890 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 43007 catatacatgtatatgtata 43026
>gb|AC010746.8| Homo sapiens BAC clone RP11-550E21 from 2, complete sequence Length = 229379 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 392 acacacacaaaaattcatgt 411 |||||||||||||||||||| Sbjct: 67022 acacacacaaaaattcatgt 67041
>gb|AC021736.9| Homo sapiens chromosome 8, clone RP11-115J16, complete sequence Length = 158806 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 31284 catatacatgtatatgtata 31265
>gb|AC044891.4| Homo sapiens chromosome 8, clone RP11-624C23, complete sequence Length = 183651 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 80182 catatacatgtatatgtata 80201
>gb|AC021701.8| Homo sapiens chromosome 18, clone RP11-704G7, complete sequence Length = 170311 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 101533 catatacatgtatatgtata 101552
>gb|AC020926.8| Homo sapiens chromosome 16 clone CTD-2152G12, complete sequence Length = 93288 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 48211 catatacatgtatatgtata 48192
>gb|AC008425.6| Homo sapiens chromosome 5 clone CTC-304O9, complete sequence Length = 119579 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 97469 catatacatgtatatgtata 97488 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 97484 catatacatgtatatgtata 97465
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 gcatcgacgccttccttgaa 355 |||||||||||||||||||| Sbjct: 2504750 gcatcgacgccttccttgaa 2504769
>gb|AC158511.2| Mus musculus BAC clone RP24-242G2 from chromosome 13, complete sequence Length = 143388 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 78285 catatacatgtatatgtata 78266
>gb|AC159097.5| Mus musculus chromosome 8, clone RP24-310O9, complete sequence Length = 179528 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 18176 catatacatgtatatgtata 18195
>dbj|AK083570.1| Mus musculus 9 days embryo whole body cDNA, RIKEN full-length enriched library, clone:D030046K16 product:unclassifiable, full insert sequence Length = 2480 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 cactcttctggtgtgtatat 256 |||||||||||||||||||| Sbjct: 278 cactcttctggtgtgtatat 259
>tpg|BK000964.1| TPA: TPA_exp: Mus musculus ribosomal DNA, complete repeating unit Length = 45309 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 17615 catatacatgtatatgtata 17634
>dbj|AK044494.1| Mus musculus adult retina cDNA, RIKEN full-length enriched library, clone:A930016I04 product:unclassifiable, full insert sequence Length = 2914 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 1136 catatacatgtatatgtata 1155 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 1151 catatacatgtatatgtata 1132
>gb|AC131302.5| Mus musculus chromosome 1, clone RP24-117I22, complete sequence Length = 155098 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 44473 catatacatgtatatgtata 44454
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 341 gacgccttccttgaacgcca 360 |||||||||||||||||||| Sbjct: 20071089 gacgccttccttgaacgcca 20071070 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 341 gacgccttccttgaacgcca 360 |||||||||||||||||||| Sbjct: 19940687 gacgccttccttgaacgcca 19940668
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 2755432 catatacatgtatatgtata 2755451
>gb|AC010133.4|AC010133 Homo sapiens clone RP11-118E9, complete sequence Length = 152074 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 38789 catatacatgtatatgtata 38808
>gb|AY696617.1| Pagrus major clone cm002740 microsatellite sequence Length = 734 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 582 tggtttcagagccaaagatg 601 |||||||||||||||||||| Sbjct: 408 tggtttcagagccaaagatg 389
>dbj|AB210421.1| Ciona intestinalis mRNA for transcription factor protein, complete cds, clone: citb004m11 Length = 2001 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 catcgtttggtgcatagctt 93 |||||||||||||||||||| Sbjct: 461 catcgtttggtgcatagctt 442
>gb|AC156644.2| Pan troglodytes BAC clone CH251-301K8 from chromosome unknown, complete sequence Length = 165832 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 113950 catatacatgtatatgtata 113969
>gb|AC133521.3| Mus musculus BAC clone RP23-189F22 from chromosome 12, complete sequence Length = 219682 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 443 atatacatgtatatgtatac 462 |||||||||||||||||||| Sbjct: 60332 atatacatgtatatgtatac 60351
>gb|AC016736.6| Homo sapiens BAC clone RP11-393J17 from 2, complete sequence Length = 149884 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 3543 catatacatgtatatgtata 3562
>gb|AC011246.6| Homo sapiens BAC clone RP11-498O20 from 2, complete sequence Length = 220183 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 168153 catatacatgtatatgtata 168172
>gb|AC069018.17|AC069018 Mus musculus BAC MGS3-563C15 (Genome Systems Mouse BAC Library) complete sequence Length = 157665 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 47057 catatacatgtatatgtata 47076 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 47072 catatacatgtatatgtata 47053
>dbj|AP003334.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1114B07 Length = 148060 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 59410 catatacatgtatatgtata 59429
>gb|AC010737.4|AC010737 Homo sapiens BAC clone RP11-439L24 from Y, complete sequence Length = 70204 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 443 atatacatgtatatgtatac 462 |||||||||||||||||||| Sbjct: 16034 atatacatgtatatgtatac 16053
>gb|AC136777.8| Homo sapiens chromosome 8, clone RP11-63E5, complete sequence Length = 175263 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 443 atatacatgtatatgtatac 462 |||||||||||||||||||| Sbjct: 158777 atatacatgtatatgtatac 158758
>gb|AC136003.10| Mus musculus chromosome 15, clone RP23-191C24, complete sequence Length = 214651 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 443 atatacatgtatatgtatac 462 |||||||||||||||||||| Sbjct: 206279 atatacatgtatatgtatac 206260
>dbj|AP006554.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0529C07 Length = 174011 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 167179 catatacatgtatatgtata 167198
>dbj|BS000098.1| Pan troglodytes chromosome 22 clone:CH251-269G16, map 22, complete sequences Length = 44745 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 443 atatacatgtatatgtatac 462 |||||||||||||||||||| Sbjct: 27820 atatacatgtatatgtatac 27839
>dbj|AK119422.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-132-H02, full insert sequence Length = 3198 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 341 gacgccttccttgaacgcca 360 |||||||||||||||||||| Sbjct: 240 gacgccttccttgaacgcca 221
>gb|AC123644.8| Mus musculus chromosome 15, clone RP23-85G7, complete sequence Length = 186827 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 29243 catatacatgtatatgtata 29262 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 29258 catatacatgtatatgtata 29239
>gb|AC004552.1|AC004552 Homo sapiens Xp22 BAC GSHB-184P14 (Genome Systems Human BAC library) complete sequence Length = 137271 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 91489 catatacatgtatatgtata 91470
>gb|AC145042.3| Macropus eugenii clone ME_KBa-289E24, complete sequence Length = 161181 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 114598 catatacatgtatatgtata 114617 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 114613 catatacatgtatatgtata 114594
>gb|AC005875.2|AC005875 citb_188_b_12, complete sequence Length = 131535 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 443 atatacatgtatatgtatac 462 |||||||||||||||||||| Sbjct: 128931 atatacatgtatatgtatac 128950 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 443 atatacatgtatatgtatac 462 |||||||||||||||||||| Sbjct: 128850 atatacatgtatatgtatac 128869
>gb|AC154300.2| Mus musculus BAC clone RP23-390F4 from 12, complete sequence Length = 187014 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 agtactgtagacaagaagag 150 |||||||||||||||||||| Sbjct: 166431 agtactgtagacaagaagag 166412
>gb|AC122122.14| Mus musculus chromosome 1, clone RP23-15D21, complete sequence Length = 204416 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 129114 catatacatgtatatgtata 129095
>gb|AC007421.12|AC007421 Homo sapiens chromosome 17, clone hRPC.1030_O_14, complete sequence Length = 95240 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 443 atatacatgtatatgtatac 462 |||||||||||||||||||| Sbjct: 62237 atatacatgtatatgtatac 62218 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 443 atatacatgtatatgtatac 462 |||||||||||||||||||| Sbjct: 62213 atatacatgtatatgtatac 62194 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 443 atatacatgtatatgtatac 462 |||||||||||||||||||| Sbjct: 62187 atatacatgtatatgtatac 62168 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 443 atatacatgtatatgtatac 462 |||||||||||||||||||| Sbjct: 62161 atatacatgtatatgtatac 62142
>gb|AE003654.3| Drosophila melanogaster chromosome 2L, section 63 of 83 of the complete sequence Length = 258558 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 440 gccatatacatgtatatgta 459 |||||||||||||||||||| Sbjct: 67532 gccatatacatgtatatgta 67551
>dbj|AP000904.6| Homo sapiens genomic DNA, chromosome 11 clone:RP11-702B10, complete sequence Length = 175904 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 78737 catatacatgtatatgtata 78756 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 78752 catatacatgtatatgtata 78733
>dbj|AP001689.1| Homo sapiens genomic DNA, chromosome 21q, section 33/105 Length = 340000 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 162936 catatacatgtatatgtata 162955
>dbj|AP001681.1| Homo sapiens genomic DNA, chromosome 21q, section 25/105 Length = 340000 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 443 atatacatgtatatgtatac 462 |||||||||||||||||||| Sbjct: 178657 atatacatgtatatgtatac 178676
>gb|AC131033.7| Mus musculus chromosome 15, clone RP23-350J23, complete sequence Length = 219579 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 179105 catatacatgtatatgtata 179086
>gb|AC158400.3| Pan troglodytes BAC clone CH251-530D15 from chromosome unknown, complete sequence Length = 205243 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 54129 catatacatgtatatgtata 54148
>gb|AC134793.10| Mus musculus chromosome 15, clone RP23-159M8, complete sequence Length = 216860 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 443 atatacatgtatatgtatac 462 |||||||||||||||||||| Sbjct: 117732 atatacatgtatatgtatac 117751
>gb|AC115771.13| Mus musculus chromosome 19, clone RP23-116D4, complete sequence Length = 209515 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 72750 catatacatgtatatgtata 72769 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 72765 catatacatgtatatgtata 72746
>gb|AC157763.2| Pan troglodytes BAC clone CH251-340C15 from chromosome unknown, complete sequence Length = 198239 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 8387 catatacatgtatatgtata 8368
>gb|AC109168.10| Mus musculus chromosome 19, clone RP23-480L24, complete sequence Length = 190309 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 29772 catatacatgtatatgtata 29753
>dbj|AK116021.1| Ciona intestinalis cDNA, clone:citb004m11, full insert sequence Length = 2001 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 catcgtttggtgcatagctt 93 |||||||||||||||||||| Sbjct: 461 catcgtttggtgcatagctt 442
>gb|U96100.1|SSU96100 Sus scrofa immunoglobulin E epsilon chain precursor, mRNA, complete cds Length = 1885 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 359 cactccaccaccaggccctacaag 382 |||||||||||||||||| ||||| Sbjct: 1564 cactccaccaccaggccccacaag 1587
>gb|AC115018.7| Mus musculus chromosome 3, clone RP24-221D2, complete sequence Length = 164720 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 152272 catatacatgtatatgtata 152253
>emb|AL591936.12| Mouse DNA sequence from clone RP23-28B10 on chromosome 2, complete sequence Length = 147431 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 101274 catatacatgtatatgtata 101293 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 101289 catatacatgtatatgtata 101270
>emb|AL844212.8| Mouse DNA sequence from clone RP23-29B20 on chromosome 4, complete sequence Length = 215351 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 122466 catatacatgtatatgtata 122447
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 341 gacgccttccttgaacgcca 360 |||||||||||||||||||| Sbjct: 20357765 gacgccttccttgaacgcca 20357746 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 341 gacgccttccttgaacgcca 360 |||||||||||||||||||| Sbjct: 20225666 gacgccttccttgaacgcca 20225647
>gb|AC155158.15| Mus musculus chromosome 3, clone RP24-70L3, complete sequence Length = 240767 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 117809 catatacatgtatatgtata 117828
>emb|AL928893.10| Mouse DNA sequence from clone RP23-55I14 on chromosome 2, complete sequence Length = 235241 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 128181 catatacatgtatatgtata 128162
>gb|AC005181.1|AC005181 Homo sapiens chromosome 17, clone hRPK.1003_J_3, complete sequence Length = 202763 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 441 ccatatacatgtatatgtat 460 |||||||||||||||||||| Sbjct: 15921 ccatatacatgtatatgtat 15940
>gb|AC147184.3| Mus musculus BAC clone RP24-286F20 from 1, complete sequence Length = 176857 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 88660 catatacatgtatatgtata 88641
>emb|CT030664.5| Mouse DNA sequence from clone RP23-357K7 on chromosome 13, complete sequence Length = 192064 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 136956 catatacatgtatatgtata 136937
>gb|AC150648.2| Mus musculus BAC clone RP23-235N5 from 7, complete sequence Length = 190414 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 566 acagaggagaggaagatggt 585 |||||||||||||||||||| Sbjct: 170269 acagaggagaggaagatggt 170288
>emb|CR354395.20| Zebrafish DNA sequence from clone DKEYP-45G11 in linkage group 12, complete sequence Length = 160211 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 389 ctcacacacacaaaaattca 408 |||||||||||||||||||| Sbjct: 157552 ctcacacacacaaaaattca 157571
>dbj|AP005597.2| Homo sapiens genomic DNA, chromosome 11 clone:RP11-72M10, complete sequence Length = 163324 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 115320 catatacatgtatatgtata 115339
>gb|AC162912.5| Mus musculus BAC clone RP24-381G1 from chromosome 13, complete sequence Length = 190181 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 158554 catatacatgtatatgtata 158573
>gb|AC158166.2| Mus musculus BAC clone RP23-339K21 from chromosome 16, complete sequence Length = 194274 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 443 atatacatgtatatgtatac 462 |||||||||||||||||||| Sbjct: 188738 atatacatgtatatgtatac 188757
>gb|AC164566.3| Mus musculus BAC clone RP23-94P17 from chromosome 16, complete sequence Length = 203314 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 443 atatacatgtatatgtatac 462 |||||||||||||||||||| Sbjct: 69960 atatacatgtatatgtatac 69941
>emb|AL732410.6| Mouse DNA sequence from clone RP23-91L2 on chromosome X, complete sequence Length = 220894 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 218405 catatacatgtatatgtata 218424
>emb|AL928871.5| Mouse DNA sequence from clone RP23-350F2 on chromosome 2, complete sequence Length = 133330 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 443 atatacatgtatatgtatac 462 |||||||||||||||||||| Sbjct: 129822 atatacatgtatatgtatac 129803
>emb|AL773582.6| Mouse DNA sequence from clone RP23-174J23 on chromosome 2, complete sequence Length = 206309 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 443 atatacatgtatatgtatac 462 |||||||||||||||||||| Sbjct: 90538 atatacatgtatatgtatac 90519
>emb|AL671493.12| Mouse DNA sequence from clone RP23-105O4 on chromosome X, complete sequence Length = 220631 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 136934 catatacatgtatatgtata 136953
>gb|AC130656.11| Mus musculus chromosome 15, clone RP23-305M4, complete sequence Length = 185933 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 34081 catatacatgtatatgtata 34062
>emb|AL133167.4|CNS01DU1 Human chromosome 14 DNA sequence BAC R-185P18 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 163096 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 24792 catatacatgtatatgtata 24811
>gb|AC090043.2| Homo sapiens chromosome 3 clone RP11-551L4 map 3p, complete sequence Length = 173854 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 443 atatacatgtatatgtatac 462 |||||||||||||||||||| Sbjct: 163566 atatacatgtatatgtatac 163547
>dbj|AP000477.2| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2, clone:P494A8, LL56-APP region, complete sequence Length = 108432 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 104398 catatacatgtatatgtata 104417
>dbj|AP004294.1| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1651H12 Length = 180236 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 441 ccatatacatgtatatgtat 460 |||||||||||||||||||| Sbjct: 60963 ccatatacatgtatatgtat 60982
>dbj|AP001137.2| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2, LL56-APP region, clone:B812P3 Length = 203959 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 443 atatacatgtatatgtatac 462 |||||||||||||||||||| Sbjct: 42998 atatacatgtatatgtatac 43017
>emb|AL355005.3| Mouse DNA sequence from clone RP21-429M4 on chromosome X, complete sequence Length = 140069 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 catatacatgtatatgtata 461 |||||||||||||||||||| Sbjct: 74192 catatacatgtatatgtata 74173 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,362,847 Number of Sequences: 3902068 Number of extensions: 6362847 Number of successful extensions: 223014 Number of sequences better than 10.0: 235 Number of HSP's better than 10.0 without gapping: 238 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 221079 Number of HSP's gapped (non-prelim): 1926 length of query: 620 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 597 effective length of database: 17,143,297,704 effective search space: 10234548729288 effective search space used: 10234548729288 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
