ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd22g02 |
|---|---|
| Clone Library Name | barley_pub |
>TRIPC_HUMAN (Q14669) Thyroid receptor-interacting protein 12 (TRIP12)| Length = 1992 Score = 154 bits (388), Expect = 3e-37 Identities = 84/163 (51%), Positives = 102/163 (62%), Gaps = 1/163 (0%) Frame = -3 Query: 693 AFKAGFNQVFDISSLQIFSPQELDYLICGRR-ELWEPETLVEHIKFDHGYTSKSPAIVNL 517 +F+ GF VF +S LQ F P+ELD L+CG + + W+ +TL+E + DHGYT S A+ L Sbjct: 1840 SFRDGFESVFPLSHLQYFYPEELDQLLCGSKADTWDAKTLMECCRPDHGYTHDSRAVKFL 1899 Query: 516 LEIMTEFTPEQQHAFCQFVTGAPRLPPGGLASLNPKLTIVRKHXXXXXXXXXXXXXXXXX 337 EI++ F EQQ F QFVTG+PRLP GG SLNP LTIVRK Sbjct: 1900 FEILSSFDNEQQRLFLQFVTGSPRLPVGGFRSLNPPLTIVRK----------TFESTENP 1949 Query: 336 XXDLPSVMTCANYLKLPPYSTKEVMHKKLLYAINEGQGSFDLS 208 LPSVMTC NYLKLP YS+ E+M +KLL A EGQ SF LS Sbjct: 1950 DDFLPSVMTCVNYLKLPDYSSIEIMREKLLIAAREGQQSFHLS 1992
>YDE1_SCHPO (Q10435) Probable ubiquitin fusion degradation protein C12B10.01c| Length = 1647 Score = 129 bits (324), Expect = 8e-30 Identities = 74/162 (45%), Positives = 95/162 (58%) Frame = -3 Query: 693 AFKAGFNQVFDISSLQIFSPQELDYLICGRRELWEPETLVEHIKFDHGYTSKSPAIVNLL 514 AF+ GF+ VF +SLQ+ + EL L E W TL++ I DHGYT +SP I LL Sbjct: 1496 AFQNGFSSVFPYTSLQVLTEHELVTLFGTVDEDWSYATLMKSIVADHGYTMESPTIQRLL 1555 Query: 513 EIMTEFTPEQQHAFCQFVTGAPRLPPGGLASLNPKLTIVRKHXXXXXXXXXXXXXXXXXX 334 +M++ ++Q F QF+TG+ +LP GG A LNP LT+VR+ Sbjct: 1556 TLMSQMNFQEQRDFLQFITGSRKLPIGGFAGLNPPLTVVRR----------LNEPPYVPD 1605 Query: 333 XDLPSVMTCANYLKLPPYSTKEVMHKKLLYAINEGQGSFDLS 208 LPSVMTC NYLKLP YS+ EV+ +L AI EGQGSF LS Sbjct: 1606 DYLPSVMTCVNYLKLPEYSSSEVLGSRLSKAILEGQGSFHLS 1647
>UFD4_YEAST (P33202) Ubiquitin fusion degradation protein 4 (UB fusion protein 4)| Length = 1483 Score = 123 bits (308), Expect = 6e-28 Identities = 67/162 (41%), Positives = 90/162 (55%) Frame = -3 Query: 693 AFKAGFNQVFDISSLQIFSPQELDYLICGRRELWEPETLVEHIKFDHGYTSKSPAIVNLL 514 AF GF++VF + I P EL + E W TL ++ +HGYT S I + + Sbjct: 1332 AFIEGFSKVFSYERMLILFPDELVDIFGRVEEDWSMATLYTNLNAEHGYTMDSSIIHDFI 1391 Query: 513 EIMTEFTPEQQHAFCQFVTGAPRLPPGGLASLNPKLTIVRKHXXXXXXXXXXXXXXXXXX 334 I++ F ++ F QF+TG+P+LP GG SLNPK T+V KH Sbjct: 1392 SIISAFGKHERRLFLQFLTGSPKLPIGGFKSLNPKFTVVLKH----------AEDGLTAD 1441 Query: 333 XDLPSVMTCANYLKLPPYSTKEVMHKKLLYAINEGQGSFDLS 208 LPSVMTCANYLKLP Y++K++M +L AI EG G+F LS Sbjct: 1442 EYLPSVMTCANYLKLPKYTSKDIMRSRLCQAIEEGAGAFLLS 1483
>HECD1_HUMAN (Q9ULT8) E3 ubiquitin-protein ligase HECTD1 (HECT domain-containing| protein 1) (E3 ligase for inhibin receptor) (EULIR) Length = 2612 Score = 113 bits (283), Expect = 5e-25 Identities = 58/155 (37%), Positives = 88/155 (56%), Gaps = 1/155 (0%) Frame = -3 Query: 693 AFKAGFNQVFDISSLQIFSPQELDYLICGRRE-LWEPETLVEHIKFDHGYTSKSPAIVNL 517 AF+ GFN+VF + L FS +E+ ++CG + W E ++ + + GYT SP + Sbjct: 2466 AFRDGFNKVFPMEKLSSFSHEEVQMILCGNQSPSWAAEDIINYTEPKLGYTRDSPGFLRF 2525 Query: 516 LEIMTEFTPEQQHAFCQFVTGAPRLPPGGLASLNPKLTIVRKHXXXXXXXXXXXXXXXXX 337 + ++ + +++ AF QF TG LPPGGLA+L+P+LT+VRK Sbjct: 2526 VRVLCGMSSDERKAFLQFTTGCSTLPPGGLANLHPRLTVVRK--------------VDAT 2571 Query: 336 XXDLPSVMTCANYLKLPPYSTKEVMHKKLLYAINE 232 PSV TC +YLKLP YS++E+M ++LL A E Sbjct: 2572 DASYPSVNTCVHYLKLPEYSSEEIMRERLLAATME 2606
>UBE3A_HUMAN (Q05086) Ubiquitin-protein ligase E3A (EC 6.3.2.-) (E6AP| ubiquitin-protein ligase) (Oncogenic protein-associated protein E6-AP) (Human papillomavirus E6-associated protein) (NY-REN-54 antigen) Length = 875 Score = 89.7 bits (221), Expect = 7e-18 Identities = 60/158 (37%), Positives = 82/158 (51%), Gaps = 1/158 (0%) Frame = -3 Query: 693 AFKAGFNQVFDISSLQ-IFSPQELDYLICGRRELWEPETLVEHIKFDHGYTSKSPAIVNL 517 AF+ GF+ V + S L+ +F P+E++ LICG R L + + L E ++D GYT S I Sbjct: 732 AFRRGFHMVTNESPLKYLFRPEEIELLICGSRNL-DFQALEETTEYDGGYTRDSVLIREF 790 Query: 516 LEIMTEFTPEQQHAFCQFVTGAPRLPPGGLASLNPKLTIVRKHXXXXXXXXXXXXXXXXX 337 EI+ FT EQ+ F QF TG R P GGL L K+ I + Sbjct: 791 WEIVHSFTDEQKRLFLQFTTGTDRAPVGGLGKL--KMIIAKN---------------GPD 833 Query: 336 XXDLPSVMTCANYLKLPPYSTKEVMHKKLLYAINEGQG 223 LP+ TC N L LP YS+KE + ++LL AI +G Sbjct: 834 TERLPTSHTCFNVLLLPEYSSKEKLKERLLKAITYAKG 871
>UBE3A_MOUSE (O08759) Ubiquitin-protein ligase E3A (EC 6.3.2.-) (Oncogenic| protein-associated protein E6-AP) Length = 885 Score = 87.8 bits (216), Expect = 3e-17 Identities = 59/158 (37%), Positives = 82/158 (51%), Gaps = 1/158 (0%) Frame = -3 Query: 693 AFKAGFNQVFDISSLQ-IFSPQELDYLICGRRELWEPETLVEHIKFDHGYTSKSPAIVNL 517 AF+ GF+ V + S L+ +F P+E++ LICG R L + + L E ++D GYT +S I Sbjct: 742 AFRRGFHMVTNESPLKYLFRPEEIELLICGSRNL-DFQALEETTEYDGGYTRESVVIREF 800 Query: 516 LEIMTEFTPEQQHAFCQFVTGAPRLPPGGLASLNPKLTIVRKHXXXXXXXXXXXXXXXXX 337 EI+ FT EQ+ F F TG R P GGL L K+ I + Sbjct: 801 WEIVHSFTDEQKRLFLLFTTGTDRAPVGGLGKL--KMIIAKN---------------GPD 843 Query: 336 XXDLPSVMTCANYLKLPPYSTKEVMHKKLLYAINEGQG 223 LP+ TC N L LP YS+KE ++ +LL AI +G Sbjct: 844 TERLPTSHTCFNVLLLPEYSSKEKLNVRLLKAITYAKG 881
>HUL5_YEAST (P53119) Probable ubiquitin-protein ligase HUL5 (EC 6.3.2.-)| Length = 910 Score = 82.8 bits (203), Expect = 9e-16 Identities = 53/162 (32%), Positives = 79/162 (48%) Frame = -3 Query: 693 AFKAGFNQVFDISSLQIFSPQELDYLICGRRELWEPETLVEHIKFDHGYTSKSPAIVNLL 514 AF G + + +++F+ EL LI G R+ + + L + ++ GY + IV+ Sbjct: 766 AFHGGLSVIIAPHWMEMFNSIELQMLISGERDNIDLDDLKSNTEYG-GYKEEDQTIVDFW 824 Query: 513 EIMTEFTPEQQHAFCQFVTGAPRLPPGGLASLNPKLTIVRKHXXXXXXXXXXXXXXXXXX 334 E++ EF E++ F +FVT P+ P G +L+PK I Sbjct: 825 EVLNEFKFEEKLNFLKFVTSVPQAPLQGFKALDPKFGI---------------RNAGTEK 869 Query: 333 XDLPSVMTCANYLKLPPYSTKEVMHKKLLYAINEGQGSFDLS 208 LP+ TC N LKLP Y K ++ +KLLYAIN G FDLS Sbjct: 870 YRLPTASTCVNLLKLPDYRNKTILREKLLYAINSG-ARFDLS 910
>WWP2_HUMAN (O00308) NEDD4-like E3 ubiquitin-protein ligase WWP2 (EC 6.3.2.-) (WW| domain-containing protein 2) (Atrophin-1-interacting protein 2) (AIP2) Length = 870 Score = 80.9 bits (198), Expect = 3e-15 Identities = 55/165 (33%), Positives = 77/165 (46%), Gaps = 8/165 (4%) Frame = -3 Query: 693 AFKAGFNQVFDISSLQIFSPQELDYLICGRREL----WEPETLVEHIKFDHGYTSKSPAI 526 AF GFN+V + L+ F +EL+ ++CG +E+ W+ T+ H YT S I Sbjct: 723 AFLDGFNEVAPLEWLRYFDEKELELMLCGMQEIDMSDWQKSTIYRH------YTKNSKQI 776 Query: 525 VNLLEIMTEFTPEQQHAFCQFVTGAPRLPPGGLASL----NPKLTIVRKHXXXXXXXXXX 358 +++ E E++ QFVTG RLP GG A L P+ + K Sbjct: 777 QWFWQVVKEMDNEKRIRLLQFVTGTCRLPVGGFAELIGSNGPQKFCIDK----------- 825 Query: 357 XXXXXXXXXDLPSVMTCANYLKLPPYSTKEVMHKKLLYAINEGQG 223 LP TC N L LPPY + E + +KLLYAI E +G Sbjct: 826 ----VGKETWLPRSHTCFNRLDLPPYKSYEQLREKLLYAIEETEG 866
>WWP1_MOUSE (Q8BZZ3) NEDD4-like E3 ubiquitin-protein ligase WWP1 (EC 6.3.2.-) (WW| domain-containing protein 1) Length = 918 Score = 79.0 bits (193), Expect = 1e-14 Identities = 55/165 (33%), Positives = 76/165 (46%), Gaps = 8/165 (4%) Frame = -3 Query: 693 AFKAGFNQVFDISSLQIFSPQELDYLICGRREL----WEPETLVEHIKFDHGYTSKSPAI 526 AF GFN+V + LQ F +EL+ ++CG +E+ W+ T+ H YT S I Sbjct: 771 AFLDGFNEVVPLQWLQYFDEKELEVMLCGMQEVDLADWQRNTVYRH------YTRNSKQI 824 Query: 525 VNLLEIMTEFTPEQQHAFCQFVTGAPRLPPGGLASL----NPKLTIVRKHXXXXXXXXXX 358 + + + E E + QFVTG RLP GG A L P+ + K Sbjct: 825 IWFWQFVKETDNEVRMRLLQFVTGTCRLPLGGFAELMGSNGPQKFCIEK----------- 873 Query: 357 XXXXXXXXXDLPSVMTCANYLKLPPYSTKEVMHKKLLYAINEGQG 223 LP TC N L LPPY + E + +KLL+AI E +G Sbjct: 874 ----VGKDTWLPRSHTCFNRLDLPPYKSYEQLKEKLLFAIEETEG 914
>WWP1_HUMAN (Q9H0M0) NEDD4-like E3 ubiquitin-protein ligase WWP1 (EC 6.3.2.-) (WW| domain-containing protein 1) (Atropin-1-interacting protein 5) (AIP5) Length = 922 Score = 79.0 bits (193), Expect = 1e-14 Identities = 55/165 (33%), Positives = 76/165 (46%), Gaps = 8/165 (4%) Frame = -3 Query: 693 AFKAGFNQVFDISSLQIFSPQELDYLICGRREL----WEPETLVEHIKFDHGYTSKSPAI 526 AF GFN+V + LQ F +EL+ ++CG +E+ W+ T+ H YT S I Sbjct: 775 AFLDGFNEVVPLQWLQYFDEKELEVMLCGMQEVDLADWQRNTVYRH------YTRNSKQI 828 Query: 525 VNLLEIMTEFTPEQQHAFCQFVTGAPRLPPGGLASL----NPKLTIVRKHXXXXXXXXXX 358 + + + E E + QFVTG RLP GG A L P+ + K Sbjct: 829 IWFWQFVKETDNEVRMRLLQFVTGTCRLPLGGFAELMGSNGPQKFCIEK----------- 877 Query: 357 XXXXXXXXXDLPSVMTCANYLKLPPYSTKEVMHKKLLYAINEGQG 223 LP TC N L LPPY + E + +KLL+AI E +G Sbjct: 878 ----VGKDTWLPRSHTCFNRLDLPPYKSYEQLKEKLLFAIEETEG 918
>ITCH_MOUSE (Q8C863) Itchy E3 ubiquitin protein ligase (EC 6.3.2.-)| Length = 864 Score = 77.8 bits (190), Expect = 3e-14 Identities = 54/165 (32%), Positives = 75/165 (45%), Gaps = 8/165 (4%) Frame = -3 Query: 693 AFKAGFNQVFDISSLQIFSPQELDYLICGRREL----WEPETLVEHIKFDHGYTSKSPAI 526 AF GFN++ LQ F +EL+ L+CG +E+ W+ + H YT S I Sbjct: 717 AFFEGFNEILPQQYLQYFDAKELEVLLCGMQEIDLNDWQRHAIYRH------YTRTSKQI 770 Query: 525 VNLLEIMTEFTPEQQHAFCQFVTGAPRLPPGGLASL----NPKLTIVRKHXXXXXXXXXX 358 + + + E E++ QFVTG RLP GG A L P+ + K Sbjct: 771 MWFWQFVKEIDNEKRMRLLQFVTGTCRLPVGGFADLMGSNGPQKFCIEK----------- 819 Query: 357 XXXXXXXXXDLPSVMTCANYLKLPPYSTKEVMHKKLLYAINEGQG 223 LP TC N L LPPY + E + +KLL+AI E +G Sbjct: 820 ----VGKENWLPRSHTCFNRLDLPPYKSYEQLKEKLLFAIEETEG 860
>WWP2_MOUSE (Q9DBH0) NEDD4-like E3 ubiquitin-protein ligase WWP2 (EC 6.3.2.-) (WW| domain-containing protein 2) Length = 870 Score = 77.4 bits (189), Expect = 4e-14 Identities = 53/165 (32%), Positives = 76/165 (46%), Gaps = 8/165 (4%) Frame = -3 Query: 693 AFKAGFNQVFDISSLQIFSPQELDYLICGRREL----WEPETLVEHIKFDHGYTSKSPAI 526 AF GFN+V + L+ F +EL+ ++CG +E+ W+ + H YT S I Sbjct: 723 AFLDGFNEVAPLEWLRYFDEKELELMLCGMQEIDMSDWQKNAIYRH------YTKSSKQI 776 Query: 525 VNLLEIMTEFTPEQQHAFCQFVTGAPRLPPGGLASL----NPKLTIVRKHXXXXXXXXXX 358 +++ E E++ QFVTG RLP GG A L P+ + + Sbjct: 777 QWFWQVVKEMDNEKRIRLLQFVTGTCRLPVGGFAELIGSNGPQKFCIDR----------- 825 Query: 357 XXXXXXXXXDLPSVMTCANYLKLPPYSTKEVMHKKLLYAINEGQG 223 LP TC N L LPPY + E + +KLLYAI E +G Sbjct: 826 ----VGKETWLPRSHTCFNRLDLPPYKSYEQLKEKLLYAIEETEG 866
>ITCH_HUMAN (Q96J02) Itchy homolog E3 ubiquitin protein ligase (EC 6.3.2.-)| (Itch) (Atrophin-1-interacting protein 4) (AIP4) (NFE2-associated polypeptide 1) (NAPP1) Length = 903 Score = 75.9 bits (185), Expect = 1e-13 Identities = 53/165 (32%), Positives = 74/165 (44%), Gaps = 8/165 (4%) Frame = -3 Query: 693 AFKAGFNQVFDISSLQIFSPQELDYLICGRREL----WEPETLVEHIKFDHGYTSKSPAI 526 AF GFN++ LQ F +EL+ L+CG +E+ W+ + H Y S I Sbjct: 756 AFFEGFNEILPQQYLQYFDAKELEVLLCGMQEIDLNDWQRHAIYRH------YARTSKQI 809 Query: 525 VNLLEIMTEFTPEQQHAFCQFVTGAPRLPPGGLASL----NPKLTIVRKHXXXXXXXXXX 358 + + + E E++ QFVTG RLP GG A L P+ + K Sbjct: 810 MWFWQFVKEIDNEKRMRLLQFVTGTCRLPVGGFADLMGSNGPQKFCIEK----------- 858 Query: 357 XXXXXXXXXDLPSVMTCANYLKLPPYSTKEVMHKKLLYAINEGQG 223 LP TC N L LPPY + E + +KLL+AI E +G Sbjct: 859 ----VGKENWLPRSHTCFNRLDLPPYKSYEQLKEKLLFAIEETEG 899
>PUB2_SCHPO (Q9UTG2) E3 ubiquitin--protein ligase pub2 (EC 6.3.2.-)| Length = 671 Score = 73.9 bits (180), Expect = 4e-13 Identities = 50/165 (30%), Positives = 76/165 (46%), Gaps = 8/165 (4%) Frame = -3 Query: 693 AFKAGFNQVFDISSLQIFSPQELDYLICGRREL----WEPETLVEHIKFDHGYTSKSPAI 526 A K G N++ S LQIF+ ELD L+ G+R++ W+ T YT + Sbjct: 524 ALKGGLNELIPDSVLQIFNENELDTLLNGKRDIDVQDWKRFTDYR------SYTETDDIV 577 Query: 525 VNLLEIMTEFTPEQQHAFCQFVTGAPRLPPGGLASLN----PKLTIVRKHXXXXXXXXXX 358 + E+++E++PE++ QF TG RLP G ++ P+ + K Sbjct: 578 IWFWELLSEWSPEKKAKLLQFATGTSRLPLSGFKDMHGSDGPRKFTIEK----------- 626 Query: 357 XXXXXXXXXDLPSVMTCANYLKLPPYSTKEVMHKKLLYAINEGQG 223 LP TC N L +PPY++KE + +KL AI E G Sbjct: 627 ----VGHISQLPKAHTCFNRLDIPPYNSKEELEQKLTIAIQETAG 667
>HUL4_ASHGO (Q757T0) Probable ubiquitin-protein ligase HUL4 (EC 6.3.2.-) (HECT| ubiquitin ligase 4) Length = 839 Score = 71.6 bits (174), Expect = 2e-12 Identities = 43/158 (27%), Positives = 75/158 (47%), Gaps = 1/158 (0%) Frame = -3 Query: 693 AFKAGFNQVFDISSLQIFSPQELDYLICGRRELWEPETLVEHI-KFDHGYTSKSPAIVNL 517 +F+ GF V + +S ++F +EL+ L+CG E +++ + ++ G+ SP + Sbjct: 695 SFRNGFFHVIEGNSFRLFGSEELEQLVCGSNEQSLDVSMLRSVTRYQGGFDDNSPVVQWF 754 Query: 516 LEIMTEFTPEQQHAFCQFVTGAPRLPPGGLASLNPKLTIVRKHXXXXXXXXXXXXXXXXX 337 EI++E QQ FVTG+ R+P G+ ++ +++ +R Sbjct: 755 WEILSEMEYPQQRKLLHFVTGSDRVPATGVTTIPFRISRIR-----------------SG 797 Query: 336 XXDLPSVMTCANYLKLPPYSTKEVMHKKLLYAINEGQG 223 LP TC N + L Y KE + KL+ A+ E QG Sbjct: 798 ADRLPLSHTCFNEICLHEYKDKETLRNKLIIALEESQG 835
>HUL4_YEAST (P40985) Probable ubiquitin-protein ligase HUL4 (EC 6.3.2.-) (HECT| ubiquitin ligase 4) Length = 892 Score = 71.2 bits (173), Expect = 3e-12 Identities = 47/159 (29%), Positives = 84/159 (52%), Gaps = 3/159 (1%) Frame = -3 Query: 690 FKAGFNQVF-DISSLQIFSPQELDYLICGRREL--WEPETLVEHIKFDHGYTSKSPAIVN 520 F +GF +VF + +S+++F+ +EL+ L+CG E ++ ++L K+ G++ S A+ Sbjct: 746 FVSGFKRVFAECNSIKLFNSEELERLVCGDEEQTKFDFKSLRSVTKYVGGFSDDSRAVCW 805 Query: 519 LLEIMTEFTPEQQHAFCQFVTGAPRLPPGGLASLNPKLTIVRKHXXXXXXXXXXXXXXXX 340 EI+ + Q QFVT + R+P G++++ K++++ H Sbjct: 806 FWEIIESWDYPLQKKLLQFVTASDRIPATGISTIPFKISLLGSHDSDD------------ 853 Query: 339 XXXDLPSVMTCANYLKLPPYSTKEVMHKKLLYAINEGQG 223 LP TC N + L YS+K+ + KLL+AINE +G Sbjct: 854 ----LPLAHTCFNEICLWNYSSKKKLELKLLWAINESEG 888
>SUDX_DROME (Q9Y0H4) E3 ubiquitin-protein ligase suppressor of deltex (EC| 6.3.2.-) Length = 949 Score = 70.1 bits (170), Expect = 6e-12 Identities = 48/164 (29%), Positives = 74/164 (45%), Gaps = 8/164 (4%) Frame = -3 Query: 690 FKAGFNQVFDISSLQIFSPQELDYLICGRREL----WEPETLVEHIKFDHGYTSKSPAIV 523 F GFN+V + L+ F +EL+ ++CG +++ W+ T+ H Y S +V Sbjct: 803 FLEGFNEVVPLEWLKYFDERELELILCGMQDVDVEDWQRNTIYRH------YNRNSKQVV 856 Query: 522 NLLEIMTEFTPEQQHAFCQFVTGAPRLPPGGLASL----NPKLTIVRKHXXXXXXXXXXX 355 + + E E++ QFVTG R+P GG A L P+ + K Sbjct: 857 WFWQFVRETDNEKRARLLQFVTGTCRVPVGGFAELMGSNGPQRFCIEK------------ 904 Query: 354 XXXXXXXXDLPSVMTCANYLKLPPYSTKEVMHKKLLYAINEGQG 223 LP TC N L LPPY + + + +KL +AI E +G Sbjct: 905 ---VGKETWLPRSHTCFNRLDLPPYKSYDQLVEKLTFAIEETEG 945
>UPL1_ARATH (Q8GY23) E3 ubiquitin protein ligase UPL1 (EC 6.3.2.-)| (Ubiquitin-protein ligase 1) Length = 3684 Score = 69.7 bits (169), Expect = 8e-12 Identities = 51/163 (31%), Positives = 77/163 (47%), Gaps = 4/163 (2%) Frame = -3 Query: 693 AFKAGFNQVFDISSLQIFSPQELDYLICGRRELWEPETLVEHIKFDHGYTSKSPAIVNLL 514 AF GFN++ + IF+ +EL+ LI G E+ + + L + ++ YT+ SP I Sbjct: 3532 AFLEGFNELIPRELVSIFNDKELELLISGLPEI-DFDDLKANTEYT-SYTAGSPVIHWFW 3589 Query: 513 EIMTEFTPEQQHAFCQFVTGAPRLPPGGLASLN----PKLTIVRKHXXXXXXXXXXXXXX 346 E++ F+ E F QFVTG ++P G +L P+ + K Sbjct: 3590 EVVKAFSKEDMARFLQFVTGTSKVPLEGFKALQGISGPQRLQIHK--------------A 3635 Query: 345 XXXXXDLPSVMTCANYLKLPPYSTKEVMHKKLLYAINEGQGSF 217 LPS TC N L LP Y +KE + ++LL AI+E F Sbjct: 3636 YGAPERLPSAHTCFNQLDLPEYQSKEQLQERLLLAIHEASEGF 3678
>NED4L_HUMAN (Q96PU5) E3 ubiquitin-protein ligase NEDD4-like protein (EC 6.3.2.-)| (Nedd4-2) (NEDD4.2) Length = 975 Score = 69.3 bits (168), Expect = 1e-11 Identities = 48/161 (29%), Positives = 71/161 (44%), Gaps = 4/161 (2%) Frame = -3 Query: 693 AFKAGFNQVFDISSLQIFSPQELDYLICGRRELWEPETLVEHIKFDHGYTSKSPAIVNLL 514 AF GF ++ I ++IF EL+ L+CG ++ + +H + +GY P I Sbjct: 826 AFLEGFTELLPIDLIKIFDENELELLMCGLGDV-DVNDWRQHSIYKNGYCPNHPVIQWFW 884 Query: 513 EIMTEFTPEQQHAFCQFVTGAPRLPPGGLASL----NPKLTIVRKHXXXXXXXXXXXXXX 346 + + E++ QFVTG R+P G A L P+L + + Sbjct: 885 KAVLLMDAEKRIRLLQFVTGTSRVPMNGFAELYGSNGPQLFTIEQWGSPEK--------- 935 Query: 345 XXXXXDLPSVMTCANYLKLPPYSTKEVMHKKLLYAINEGQG 223 LP TC N L LPPY T E + +KLL A+ QG Sbjct: 936 ------LPRAHTCFNRLDLPPYETFEDLREKLLMAVENAQG 970
>NED4L_MOUSE (Q8CFI0) E3 ubiquitin-protein ligase NEDD4-like protein (EC 6.3.2.-)| (Nedd4-2) (NEDD4.2) Length = 1004 Score = 69.3 bits (168), Expect = 1e-11 Identities = 48/161 (29%), Positives = 71/161 (44%), Gaps = 4/161 (2%) Frame = -3 Query: 693 AFKAGFNQVFDISSLQIFSPQELDYLICGRRELWEPETLVEHIKFDHGYTSKSPAIVNLL 514 AF GF ++ I ++IF EL+ L+CG ++ + +H + +GY P I Sbjct: 855 AFLEGFTELLPIDLIKIFDENELELLMCGLGDV-DVNDWRQHSIYKNGYCPNHPVIQWFW 913 Query: 513 EIMTEFTPEQQHAFCQFVTGAPRLPPGGLASL----NPKLTIVRKHXXXXXXXXXXXXXX 346 + + E++ QFVTG R+P G A L P+L + + Sbjct: 914 KAVLLMDAEKRIRLLQFVTGTSRVPMNGFAELYGSNGPQLFTIEQWGSPEK--------- 964 Query: 345 XXXXXDLPSVMTCANYLKLPPYSTKEVMHKKLLYAINEGQG 223 LP TC N L LPPY T E + +KLL A+ QG Sbjct: 965 ------LPRAHTCFNRLDLPPYETFEDLREKLLMAVENAQG 999
>NED4L_PONPY (Q5RBF2) E3 ubiquitin-protein ligase NEDD4-like protein (EC 6.3.2.-)| Length = 959 Score = 69.3 bits (168), Expect = 1e-11 Identities = 48/161 (29%), Positives = 71/161 (44%), Gaps = 4/161 (2%) Frame = -3 Query: 693 AFKAGFNQVFDISSLQIFSPQELDYLICGRRELWEPETLVEHIKFDHGYTSKSPAIVNLL 514 AF GF ++ I ++IF EL+ L+CG ++ + +H + +GY P I Sbjct: 810 AFLEGFTELLPIDLIKIFDENELELLMCGLGDV-DVNDWRQHSIYKNGYCPNHPVIQWFW 868 Query: 513 EIMTEFTPEQQHAFCQFVTGAPRLPPGGLASL----NPKLTIVRKHXXXXXXXXXXXXXX 346 + + E++ QFVTG R+P G A L P+L + + Sbjct: 869 KAVLLMDAEKRIRLLQFVTGTSRVPMNGFAELYGSNGPQLFTIEQWGSPEK--------- 919 Query: 345 XXXXXDLPSVMTCANYLKLPPYSTKEVMHKKLLYAINEGQG 223 LP TC N L LPPY T E + +KLL A+ QG Sbjct: 920 ------LPRAHTCFNRLDLPPYETFEDLREKLLMAVENAQG 954
>K0317_HUMAN (O15033) Protein KIAA0317| Length = 823 Score = 67.8 bits (164), Expect = 3e-11 Identities = 43/160 (26%), Positives = 69/160 (43%) Frame = -3 Query: 690 FKAGFNQVFDISSLQIFSPQELDYLICGRRELWEPETLVEHIKFDHGYTSKSPAIVNLLE 511 F G N++ + L IF EL+ L+CG ++ + + + + + Sbjct: 679 FLKGLNELVPENLLAIFDENELELLMCGTGDISVSDFKAHAVVVGGSWHFREKVMRWFWT 738 Query: 510 IMTEFTPEQQHAFCQFVTGAPRLPPGGLASLNPKLTIVRKHXXXXXXXXXXXXXXXXXXX 331 +++ T E+ QF TG+ +LPPGG A+L P I+ Sbjct: 739 VVSSLTQEELARLLQFTTGSSQLPPGGFAALCPSFQII----------------AAPTHS 782 Query: 330 DLPSVMTCANYLKLPPYSTKEVMHKKLLYAINEGQGSFDL 211 LP+ TC N L LP Y + E +H+ L AI+EG F + Sbjct: 783 TLPTAHTCFNQLCLPTYDSYEEVHRMLQLAISEGCEGFGM 822
>K0317_MOUSE (Q8CHG5) Protein KIAA0317| Length = 823 Score = 67.4 bits (163), Expect = 4e-11 Identities = 43/160 (26%), Positives = 69/160 (43%) Frame = -3 Query: 690 FKAGFNQVFDISSLQIFSPQELDYLICGRRELWEPETLVEHIKFDHGYTSKSPAIVNLLE 511 F G N++ + L IF EL+ L+CG ++ + + + + + Sbjct: 679 FLKGLNELVPENLLAIFDENELELLMCGTGDINVSDFKAHAVVVGGSWHFREKVMRWFWA 738 Query: 510 IMTEFTPEQQHAFCQFVTGAPRLPPGGLASLNPKLTIVRKHXXXXXXXXXXXXXXXXXXX 331 +++ T E+ QF TG+ +LPPGG A+L P I+ Sbjct: 739 VVSSLTQEELARLLQFTTGSSQLPPGGFAALCPSFQII----------------AAPTHS 782 Query: 330 DLPSVMTCANYLKLPPYSTKEVMHKKLLYAINEGQGSFDL 211 LP+ TC N L LP Y + E +H+ L AI+EG F + Sbjct: 783 TLPTAHTCFNQLCLPTYDSYEEVHRMLQLAISEGCEGFGM 822
>UBE3C_MOUSE (Q80U95) Ubiquitin-protein ligase E3C (EC 6.3.2.-)| Length = 1083 Score = 67.4 bits (163), Expect = 4e-11 Identities = 48/162 (29%), Positives = 68/162 (41%) Frame = -3 Query: 693 AFKAGFNQVFDISSLQIFSPQELDYLICGRRELWEPETLVEHIKFDHGYTSKSPAIVNLL 514 AF+ G V + L++F QE+ LI G + E L + GY++ P I Sbjct: 938 AFRQGLANVVSLEWLRMFDQQEIQVLISGAQVPVSLEDLKSFTNYSGGYSADHPVIKIFW 997 Query: 513 EIMTEFTPEQQHAFCQFVTGAPRLPPGGLASLNPKLTIVRKHXXXXXXXXXXXXXXXXXX 334 ++ FT E++ +FVT R P G L P I Sbjct: 998 RVVEGFTDEEKRKLLKFVTSCSRPPLLGFKELYPAFCI---------------HNGGSDL 1042 Query: 333 XDLPSVMTCANYLKLPPYSTKEVMHKKLLYAINEGQGSFDLS 208 LP+ TC N LKLP + + ++ KLLYAI E F+LS Sbjct: 1043 ERLPTASTCMNLLKLPEFYDEALLRSKLLYAI-ECAAGFELS 1083
>UBE3C_HUMAN (Q15386) Ubiquitin-protein ligase E3C (EC 6.3.2.-)| Length = 1083 Score = 67.4 bits (163), Expect = 4e-11 Identities = 48/162 (29%), Positives = 68/162 (41%) Frame = -3 Query: 693 AFKAGFNQVFDISSLQIFSPQELDYLICGRRELWEPETLVEHIKFDHGYTSKSPAIVNLL 514 AF+ G V + L++F QE+ LI G + E L + GY++ P I Sbjct: 938 AFRQGLANVVSLEWLRMFDQQEIQVLISGAQVPISLEDLKSFTNYSGGYSADHPVIKVFW 997 Query: 513 EIMTEFTPEQQHAFCQFVTGAPRLPPGGLASLNPKLTIVRKHXXXXXXXXXXXXXXXXXX 334 ++ FT E++ +FVT R P G L P I Sbjct: 998 RVVEGFTDEEKRKLLKFVTSCSRPPLLGFKELYPAFCI---------------HNGGSDL 1042 Query: 333 XDLPSVMTCANYLKLPPYSTKEVMHKKLLYAINEGQGSFDLS 208 LP+ TC N LKLP + + ++ KLLYAI E F+LS Sbjct: 1043 ERLPTASTCMNLLKLPEFYDETLLRSKLLYAI-ECAAGFELS 1083
>UPL2_ARATH (Q8H0T4) E3 ubiquitin protein ligase UPL2 (EC 6.3.2.-)| (Ubiquitin-protein ligase 2) Length = 3658 Score = 66.2 bits (160), Expect = 9e-11 Identities = 52/166 (31%), Positives = 74/166 (44%), Gaps = 7/166 (4%) Frame = -3 Query: 693 AFKAGFNQVFDISSLQIFSPQELDYLICGRRELWEPETLVEHIKFDHGYTSK---SPAIV 523 AF G N++ + IF+ +EL+ LI G PE + +K + YTS SP I Sbjct: 3509 AFLEGLNELIPRELVSIFNDKELELLISGL-----PEIDFDDLKANTEYTSYTVGSPVIR 3563 Query: 522 NLLEIMTEFTPEQQHAFCQFVTGAPRLPPGGLASLN----PKLTIVRKHXXXXXXXXXXX 355 E++ F+ E F QFVTG ++P G +L P+ + K Sbjct: 3564 WFWEVVKAFSKEDMARFLQFVTGTSKVPLEGFKALQGISGPQRLQIHK------------ 3611 Query: 354 XXXXXXXXDLPSVMTCANYLKLPPYSTKEVMHKKLLYAINEGQGSF 217 LPS TC N L LP Y +KE + ++LL AI+E F Sbjct: 3612 --AYGSPERLPSAHTCFNQLDLPEYQSKEQVQERLLLAIHEANEGF 3655
>PTR1_SCHPO (O13834) E3 ubiquitin protein ligase ptr1 (EC 6.3.2.-) (Poly(A)+ RNA| transport protein 1) Length = 3227 Score = 64.7 bits (156), Expect = 3e-10 Identities = 48/159 (30%), Positives = 63/159 (39%), Gaps = 4/159 (2%) Frame = -3 Query: 681 GFNQVFDISSLQIFSPQELDYLICGRREL----WEPETLVEHIKFDHGYTSKSPAIVNLL 514 GF+ + +QIF+ QEL+ LI G E+ W+ T HGY SP + Sbjct: 3082 GFSDIIPSHLIQIFNEQELELLISGLPEIDIDDWKNNTEY------HGYNVSSPQVQWFW 3135 Query: 513 EIMTEFTPEQQHAFCQFVTGAPRLPPGGLASLNPKLTIVRKHXXXXXXXXXXXXXXXXXX 334 + F E++ QF TG ++P G L R + Sbjct: 3136 RAVRSFDEEERAKLLQFATGTSKVPLNGFKELEGMSGFQRFNIHKSYGSLNR-------- 3187 Query: 333 XDLPSVMTCANYLKLPPYSTKEVMHKKLLYAINEGQGSF 217 LP TC N L LP Y T E + LL AINEG F Sbjct: 3188 --LPQSHTCFNQLDLPEYDTYEQLRSMLLTAINEGSEGF 3224
>NEDD4_HUMAN (P46934) E3 ubiquitin-protein ligase NEDD4 (EC 6.3.2.-)| Length = 1000 Score = 64.3 bits (155), Expect = 3e-10 Identities = 46/157 (29%), Positives = 66/157 (42%) Frame = -3 Query: 693 AFKAGFNQVFDISSLQIFSPQELDYLICGRRELWEPETLVEHIKFDHGYTSKSPAIVNLL 514 AFK GF ++ ++IF EL+ L+CG ++ + EH K+ +GY++ I Sbjct: 851 AFKEGFFELIPQDLIKIFDENELELLMCGLGDV-DVNDWREHTKYKNGYSANHQVIQWFW 909 Query: 513 EIMTEFTPEQQHAFCQFVTGAPRLPPGGLASLNPKLTIVRKHXXXXXXXXXXXXXXXXXX 334 + + E++ QFVTG R+P G A L Sbjct: 910 KAVLMMDSEKRIRLLQFVTGTSRVPMNGFAEL-----------YGSNGPQSFTVEQWGTP 958 Query: 333 XDLPSVMTCANYLKLPPYSTKEVMHKKLLYAINEGQG 223 LP TC N L LPPY + E + KL AI QG Sbjct: 959 EKLPRAHTCFNRLDLPPYESFEELWDKLQMAIENTQG 995
>HERC3_HUMAN (Q15034) HECT domain and RCC1-like domain protein 3| Length = 1050 Score = 63.9 bits (154), Expect = 4e-10 Identities = 45/157 (28%), Positives = 70/157 (44%) Frame = -3 Query: 693 AFKAGFNQVFDISSLQIFSPQELDYLICGRRELWEPETLVEHIKFDHGYTSKSPAIVNLL 514 AF +GF +V L++F P EL ++ G + E L E + Y++ P + Sbjct: 908 AFSSGFLKVCGGKVLELFQPSELRAMMVGNSN-YNWEELEETAIYKGDYSATHPTVKLFW 966 Query: 513 EIMTEFTPEQQHAFCQFVTGAPRLPPGGLASLNPKLTIVRKHXXXXXXXXXXXXXXXXXX 334 E EF E++ F F+TG+ R+P G+ASL + Sbjct: 967 ETFHEFPLEKKKKFLLFLTGSDRIPIYGMASLQIVIQ-----------------STASGE 1009 Query: 333 XDLPSVMTCANYLKLPPYSTKEVMHKKLLYAINEGQG 223 LP TC N L LP YS+KE++ +L A++ +G Sbjct: 1010 EYLPVAHTCYNLLDLPKYSSKEILSARLTQALDNYEG 1046
>SMUF2_HUMAN (Q9HAU4) Smad ubiquitination regulatory factor 2 (EC 6.3.2.-)| (Ubiquitin--protein ligase SMURF2) (Smad-specific E3 ubiquitin ligase 2) (hSMURF2) Length = 748 Score = 62.0 bits (149), Expect = 2e-09 Identities = 49/166 (29%), Positives = 75/166 (45%), Gaps = 9/166 (5%) Frame = -3 Query: 693 AFKAGFNQVFDISSLQIFSPQELDYLICGRREL----WEPETLVEHIKFDHGYTSKSPAI 526 A + GFN+V L+ F +EL+ +ICG ++ W+ T ++H D I Sbjct: 600 ALQKGFNEVIPQHLLKTFDEKELELIICGLGKIDVNDWKVNTRLKHCTPDSN-------I 652 Query: 525 VNLLEIMTEFTPEQQHA-FCQFVTGAPRLPPGGLASLN----PKLTIVRKHXXXXXXXXX 361 V EF E++ A QFVTG+ R+P G +L P+L + + Sbjct: 653 VKWFWKAVEFFDEERRARLLQFVTGSSRVPLQGFKALQGAAGPRLFTIHQ---------- 702 Query: 360 XXXXXXXXXXDLPSVMTCANYLKLPPYSTKEVMHKKLLYAINEGQG 223 +LP TC N + +PPY + E +++KLL AI E G Sbjct: 703 ----IDACTNNLPKAHTCFNRIDIPPYESYEKLYEKLLTAIEETCG 744
>NEDD4_RAT (Q62940) E3 ubiquitin-protein ligase NEDD4 (EC 6.3.2.-)| Length = 887 Score = 61.6 bits (148), Expect = 2e-09 Identities = 45/157 (28%), Positives = 65/157 (41%) Frame = -3 Query: 693 AFKAGFNQVFDISSLQIFSPQELDYLICGRRELWEPETLVEHIKFDHGYTSKSPAIVNLL 514 AFK GF ++ ++IF EL+ L+CG ++ + EH K+ +GY+ I Sbjct: 738 AFKEGFFELIPQDLIKIFDENELELLMCGLGDV-DVNDWREHTKYKNGYSLNHQVIHWFW 796 Query: 513 EIMTEFTPEQQHAFCQFVTGAPRLPPGGLASLNPKLTIVRKHXXXXXXXXXXXXXXXXXX 334 + + E++ QFVTG R+P G A L Sbjct: 797 KAVLMMDSEKRIRLLQFVTGTSRVPMNGFAEL-----------YGSNGPQSFTVEQWGTP 845 Query: 333 XDLPSVMTCANYLKLPPYSTKEVMHKKLLYAINEGQG 223 LP TC N L LPPY + + + KL AI QG Sbjct: 846 DKLPRAHTCFNRLDLPPYESFDELWDKLQMAIENTQG 882
>NEDD4_MOUSE (P46935) E3 ubiquitin-protein ligase NEDD4 (EC 6.3.2.-) (Neural| precursor cell expressed developmentally down-regulated protein 4) Length = 887 Score = 61.6 bits (148), Expect = 2e-09 Identities = 45/157 (28%), Positives = 65/157 (41%) Frame = -3 Query: 693 AFKAGFNQVFDISSLQIFSPQELDYLICGRRELWEPETLVEHIKFDHGYTSKSPAIVNLL 514 AFK GF ++ ++IF EL+ L+CG ++ + EH K+ +GY+ I Sbjct: 738 AFKEGFFELIPQDLIKIFDENELELLMCGLGDV-DVNDWREHTKYKNGYSMNHQVIHWFW 796 Query: 513 EIMTEFTPEQQHAFCQFVTGAPRLPPGGLASLNPKLTIVRKHXXXXXXXXXXXXXXXXXX 334 + + E++ QFVTG R+P G A L Sbjct: 797 KAVWMMDSEKRIRLLQFVTGTSRVPMNGFAEL-----------YGSNGPQSFTVEQWGTP 845 Query: 333 XDLPSVMTCANYLKLPPYSTKEVMHKKLLYAINEGQG 223 LP TC N L LPPY + + + KL AI QG Sbjct: 846 DKLPRAHTCFNRLDLPPYESFDELWDKLQMAIENTQG 882
>TOM1_YEAST (Q03280) E3 ubiquitin protein ligase TOM1 (EC 6.3.2.-)| (Temperature-dependent organization in mitotic nucleus protein 1) (Suppressor of snRNA protein 2) Length = 3268 Score = 61.6 bits (148), Expect = 2e-09 Identities = 46/165 (27%), Positives = 66/165 (40%), Gaps = 4/165 (2%) Frame = -3 Query: 690 FKAGFNQVFDISSLQIFSPQELDYLICGRREL----WEPETLVEHIKFDHGYTSKSPAIV 523 F GF + + IF QEL+ LI G ++ W+ T + YT+ + Sbjct: 3120 FLVGFYALISKDLITIFDEQELELLISGLPDIDVDDWKNNTTYVN------YTATCKEVS 3173 Query: 522 NLLEIMTEFTPEQQHAFCQFVTGAPRLPPGGLASLNPKLTIVRKHXXXXXXXXXXXXXXX 343 + F E++ QFVTG ++P G L+ + + Sbjct: 3174 YFWRAVRSFDAEERAKLLQFVTGTSKVPLNGFKELSGVNGVCK----------FSIHRDF 3223 Query: 342 XXXXDLPSVMTCANYLKLPPYSTKEVMHKKLLYAINEGQGSFDLS 208 LPS TC N L LPPY + E + LL AINEG F L+ Sbjct: 3224 GSSERLPSSHTCFNQLNLPPYESYETLRGSLLLAINEGHEGFGLA 3268
>PUB1_SCHPO (Q92462) E3 ubiquitin--protein ligase pub1 (EC 6.3.2.-)| Length = 767 Score = 60.5 bits (145), Expect = 5e-09 Identities = 45/161 (27%), Positives = 70/161 (43%), Gaps = 4/161 (2%) Frame = -3 Query: 693 AFKAGFNQVFDISSLQIFSPQELDYLICGRRELWEPETLVEHIKFDHGYTSKSPAIVNLL 514 AF GF+++ + +F +EL+ LI G E+ + E +H + Y+ I Sbjct: 620 AFHEGFSELIPQELINVFDERELELLIGGISEI-DMEDWKKHTDY-RSYSENDQIIKWFW 677 Query: 513 EIMTEFTPEQQHAFCQFVTGAPRLPPGGLASLN----PKLTIVRKHXXXXXXXXXXXXXX 346 E+M E++ E++ QF TG R+P G L P+ + K Sbjct: 678 ELMDEWSNEKKSRLLQFTTGTSRIPVNGFKDLQGSDGPRKFTIEK--------------- 722 Query: 345 XXXXXDLPSVMTCANYLKLPPYSTKEVMHKKLLYAINEGQG 223 LP TC N L LPPY++K+ + KL A+ E G Sbjct: 723 AGEPNKLPKAHTCFNRLDLPPYTSKKDLDHKLSIAVEETIG 763
>HERC2_DROME (Q9VR91) HECT domain and RCC1-like domain-containing protein 2| Length = 4912 Score = 60.1 bits (144), Expect = 6e-09 Identities = 45/156 (28%), Positives = 73/156 (46%), Gaps = 3/156 (1%) Frame = -3 Query: 693 AFKAGFNQVFDISSLQIFSPQELDYLICGRRELWEPETLVEHIKFDHGYTSKSPAIVNLL 514 A + G ++V + L +FS EL ++CG ++ P L++ + G+ S + Sbjct: 4737 AVRDGMSKVIPVPLLSLFSAAELQAMVCGSPDI--PLGLLKSVATYKGFDPSSALVTWFW 4794 Query: 513 EIMTEFTPEQQHAFCQFVTGAPRLPPGGLASLNPK---LTIVRKHXXXXXXXXXXXXXXX 343 E+M EFT +++ F +FV G RLP +A + L ++ K+ Sbjct: 4795 EVMEEFTNQERSLFLRFVWGRTRLPRT-IADFRGRDFVLQVLEKNPPDHF---------- 4843 Query: 342 XXXXDLPSVMTCANYLKLPPYSTKEVMHKKLLYAIN 235 LP TC LK+P YS K V+ +KL YAI+ Sbjct: 4844 -----LPESYTCFFLLKMPRYSCKAVLLEKLKYAIH 4874
>TOM1_NEUCR (Q9P4Z1) E3 ubiquitin protein ligase TOM1-like protein (EC 6.3.2.-)| Length = 4065 Score = 60.1 bits (144), Expect = 6e-09 Identities = 46/163 (28%), Positives = 66/163 (40%), Gaps = 4/163 (2%) Frame = -3 Query: 693 AFKAGFNQVFDISSLQIFSPQELDYLICGRREL----WEPETLVEHIKFDHGYTSKSPAI 526 AF GF+++ + IF+ QEL+ LI G ++ W+ T H Y++ +P I Sbjct: 3916 AFLTGFHEIIPEELIAIFNEQELELLISGLPDIDIDDWKANTEY------HNYSAGAPQI 3969 Query: 525 VNLLEIMTEFTPEQQHAFCQFVTGAPRLPPGGLASLNPKLTIVRKHXXXXXXXXXXXXXX 346 + F E+ QFVTG ++P G L + R + Sbjct: 3970 QWFWRAVRSFDKEELAKLLQFVTGTSKVPLNGFKELEGMNGVSRFNIHRDYGSKDR---- 4025 Query: 345 XXXXXDLPSVMTCANYLKLPPYSTKEVMHKKLLYAINEGQGSF 217 LPS TC N L LP Y E + +LL AI G F Sbjct: 4026 ------LPSSHTCFNQLDLPEYENYETLRSQLLKAITAGSDYF 4062
>HERC5_HUMAN (Q9UII4) HECT domain and RCC1-like domain-containing protein 5| (Cyclin-E-binding protein 1) Length = 1024 Score = 58.5 bits (140), Expect = 2e-08 Identities = 43/156 (27%), Positives = 71/156 (45%) Frame = -3 Query: 690 FKAGFNQVFDISSLQIFSPQELDYLICGRRELWEPETLVEHIKFDHGYTSKSPAIVNLLE 511 F+ GF ++ D +++F P+EL +I G + ++ +T ++ +++ GY S P IV + Sbjct: 884 FRRGFYKMCDEDIIKLFHPEELKDVIVGNTD-YDWKTFEKNARYEPGYNSSHPTIVMFWK 942 Query: 510 IMTEFTPEQQHAFCQFVTGAPRLPPGGLASLNPKLTIVRKHXXXXXXXXXXXXXXXXXXX 331 + T E++ F F+TG RL L N K+T Sbjct: 943 AFHKLTLEEKKKFLVFLTGTDRLQMKDLN--NMKITFCCPESWNERDPI----------- 989 Query: 330 DLPSVMTCANYLKLPPYSTKEVMHKKLLYAINEGQG 223 +TC + L LP YST E + + L AIN +G Sbjct: 990 ---RALTCFSVLFLPKYSTMETVEEALQEAINNNRG 1022
>TOM1_ASHGO (Q756G2) Probable E3 ubiquitin protein ligase TOM1 (EC 6.3.2.-)| Length = 3258 Score = 58.2 bits (139), Expect = 2e-08 Identities = 47/170 (27%), Positives = 68/170 (40%), Gaps = 9/170 (5%) Frame = -3 Query: 690 FKAGFNQVFDISSLQIFSPQELDYLICGRREL----WEPETLVEHIKFDHGYTSKSPAIV 523 F GF + + IF QEL+ L+ G ++ W+ T+ + YT I Sbjct: 3110 FLQGFYAIIPKDLISIFDEQELELLVSGLPDIDVDDWKNNTIYVN------YTPTCKQIN 3163 Query: 522 NLLEIMTEFTPEQQHAFCQFVTGAPRLPPGGLASLN-----PKLTIVRKHXXXXXXXXXX 358 + F E++ QFVTG ++P G L+ K +I R + Sbjct: 3164 YFWRAVRSFDKEERAKLLQFVTGTSKVPLNGFKELSGVNGISKFSIHRDYGSIDR----- 3218 Query: 357 XXXXXXXXXDLPSVMTCANYLKLPPYSTKEVMHKKLLYAINEGQGSFDLS 208 LPS TC N L LP Y + E + LL AINEG F ++ Sbjct: 3219 ----------LPSSHTCFNQLDLPAYDSYETLRGSLLLAINEGHEGFGIA 3258
>HUWE1_HUMAN (Q7Z6Z7) HECT, UBA and WWE domain-containing protein 1 (EC 6.3.2.-)| (E3 ubiquitin protein ligase URE-B1) (Mcl-1 ubiquitin ligase E3) (Mule) (ARF-binding protein 1) (ARF-BP1) Length = 4374 Score = 57.8 bits (138), Expect = 3e-08 Identities = 48/162 (29%), Positives = 68/162 (41%) Frame = -3 Query: 693 AFKAGFNQVFDISSLQIFSPQELDYLICGRRELWEPETLVEHIKFDHGYTSKSPAIVNLL 514 AF GF ++ + IF+ QEL+ LI G + + + L + ++ H Y S S I Sbjct: 4225 AFLEGFYEIIPKRLISIFTEQELELLISGLPTI-DIDDLKSNTEY-HKYQSNSIQIQWFW 4282 Query: 513 EIMTEFTPEQQHAFCQFVTGAPRLPPGGLASLNPKLTIVRKHXXXXXXXXXXXXXXXXXX 334 + F + F QFVTG ++P G A+L I + Sbjct: 4283 RALRSFDQADRAKFLQFVTGTSKVPLQGFAALEGMNGIQK----------FQIHRDDRST 4332 Query: 333 XDLPSVMTCANYLKLPPYSTKEVMHKKLLYAINEGQGSFDLS 208 LPS TC N L LP Y + E + LL AI E F L+ Sbjct: 4333 DRLPSAHTCFNQLDLPAYESFEKLRHMLLLAIQECSEGFGLA 4374
>HUWE1_RAT (P51593) HECT, UBA and WWE domain-containing protein 1 (EC 6.3.2.-)| (E3 ubiquitin protein ligase URE-B1) (Upstream regulatory element-binding protein 1) (Fragment) Length = 322 Score = 57.8 bits (138), Expect = 3e-08 Identities = 48/162 (29%), Positives = 68/162 (41%) Frame = -3 Query: 693 AFKAGFNQVFDISSLQIFSPQELDYLICGRRELWEPETLVEHIKFDHGYTSKSPAIVNLL 514 AF GF ++ + IF+ QEL+ LI G + + + L + ++ H Y S S I Sbjct: 173 AFLEGFYEIIPKRLISIFTEQELELLISGLPTI-DIDDLKSNTEY-HKYQSNSIQIQWFW 230 Query: 513 EIMTEFTPEQQHAFCQFVTGAPRLPPGGLASLNPKLTIVRKHXXXXXXXXXXXXXXXXXX 334 + F + F QFVTG ++P G A+L I + Sbjct: 231 RALRSFDQADRAKFLQFVTGTSKVPLQGFAALEGMNGIQK----------FQIHRDDRST 280 Query: 333 XDLPSVMTCANYLKLPPYSTKEVMHKKLLYAINEGQGSFDLS 208 LPS TC N L LP Y + E + LL AI E F L+ Sbjct: 281 DRLPSAHTCFNQLDLPAYESFEKLRHMLLLAIQECSEGFGLA 322
>HUWE1_MOUSE (Q7TMY8) HECT, UBA and WWE domain-containing protein 1 (EC 6.3.2.-)| (E3 ubiquitin protein ligase URE-B1) (E3Histone) Length = 4377 Score = 57.8 bits (138), Expect = 3e-08 Identities = 48/162 (29%), Positives = 68/162 (41%) Frame = -3 Query: 693 AFKAGFNQVFDISSLQIFSPQELDYLICGRRELWEPETLVEHIKFDHGYTSKSPAIVNLL 514 AF GF ++ + IF+ QEL+ LI G + + + L + ++ H Y S S I Sbjct: 4228 AFLEGFYEIIPKRLISIFTEQELELLISGLPTI-DIDDLKSNTEY-HKYQSNSIQIQWFW 4285 Query: 513 EIMTEFTPEQQHAFCQFVTGAPRLPPGGLASLNPKLTIVRKHXXXXXXXXXXXXXXXXXX 334 + F + F QFVTG ++P G A+L I + Sbjct: 4286 RALRSFDQADRAKFLQFVTGTSKVPLQGFAALEGMNGIQK----------FQIHRDDRST 4335 Query: 333 XDLPSVMTCANYLKLPPYSTKEVMHKKLLYAINEGQGSFDLS 208 LPS TC N L LP Y + E + LL AI E F L+ Sbjct: 4336 DRLPSAHTCFNQLDLPAYESFEKLRHMLLLAIQECSEGFGLA 4377
>PUB3_SCHPO (O14326) E3 ubiquitin--protein ligase pub3 (EC 6.3.2.-)| Length = 786 Score = 55.5 bits (132), Expect = 2e-07 Identities = 43/161 (26%), Positives = 67/161 (41%), Gaps = 4/161 (2%) Frame = -3 Query: 693 AFKAGFNQVFDISSLQIFSPQELDYLICGRRELWEPETLVEHIKFDHGYTSKSPAIVNLL 514 AF +GF ++ + +F +EL+ LI G ++ + E H ++ Y + P I Sbjct: 639 AFYSGFVELVSPDLVNVFDERELELLIGGISDV-DVEDWKSHTEY-RTYIATDPVIKWFW 696 Query: 513 EIMTEFTPEQQHAFCQFVTGAPRLPPGGLASLN----PKLTIVRKHXXXXXXXXXXXXXX 346 EI+ + E + QF TG R+P G L P+ + K Sbjct: 697 EIIAGWKNEDRSKLLQFATGTSRIPVNGFRDLQGSDGPRKFTIEK--------------- 741 Query: 345 XXXXXDLPSVMTCANYLKLPPYSTKEVMHKKLLYAINEGQG 223 LP TC N L LP Y +K+ +H+KL A+ G Sbjct: 742 AGTPDQLPVAHTCFNRLDLPDYPSKDTLHEKLSLAVENTVG 782
>SMUF1_XENLA (Q9PUN2) Smad ubiquitination regulatory factor 1 (EC 6.3.2.-)| (Ubiquitin--protein ligase SMURF1) (Smad-specific E3 ubiquitin ligase) (xSMURF1) Length = 731 Score = 55.1 bits (131), Expect = 2e-07 Identities = 40/161 (24%), Positives = 69/161 (42%), Gaps = 4/161 (2%) Frame = -3 Query: 693 AFKAGFNQVFDISSLQIFSPQELDYLICGRREL----WEPETLVEHIKFDHGYTSKSPAI 526 A + GFN++ L+ F +EL+ +I G ++ W+ T ++H + S + Sbjct: 580 ALQKGFNELIPQHLLKPFEQKELELIIGGLDKIDISDWKANTRLKHC------LANSNIV 633 Query: 525 VNLLEIMTEFTPEQQHAFCQFVTGAPRLPPGGLASLNPKLTIVRKHXXXXXXXXXXXXXX 346 + + F E++ QFVTG+ R+P G +L Sbjct: 634 QWFWQAVESFDEERRARLLQFVTGSTRVPLQGFKALQGS-------TGAAGPRLFTIHLI 686 Query: 345 XXXXXDLPSVMTCANYLKLPPYSTKEVMHKKLLYAINEGQG 223 +LP TC N + +PPY + E +++KLL A+ E G Sbjct: 687 DANTDNLPKAHTCFNRIDIPPYESYEKLYEKLLTAVEETSG 727
>SMUF1_HUMAN (Q9HCE7) Smad ubiquitination regulatory factor 1 (EC 6.3.2.-)| (Ubiquitin--protein ligase SMURF1) (Smad-specific E3 ubiquitin ligase 1) (hSMURF1) Length = 757 Score = 53.9 bits (128), Expect = 5e-07 Identities = 41/161 (25%), Positives = 69/161 (42%), Gaps = 4/161 (2%) Frame = -3 Query: 693 AFKAGFNQVFDISSLQIFSPQELDYLICGRREL----WEPETLVEHIKFDHGYTSKSPAI 526 A + GFN++ L+ F +EL+ +I G ++ W+ T ++H D S + Sbjct: 606 ALQKGFNELIPQHLLKPFDQKELELIIGGLDKIDLNDWKSNTRLKHCVAD------SNIV 659 Query: 525 VNLLEIMTEFTPEQQHAFCQFVTGAPRLPPGGLASLNPKLTIVRKHXXXXXXXXXXXXXX 346 + + F E++ QFVTG+ R+P G +L Sbjct: 660 RWFWQAVETFDEERRARLLQFVTGSTRVPLQGFKALQGS-------TGAAGPRLFTIHLI 712 Query: 345 XXXXXDLPSVMTCANYLKLPPYSTKEVMHKKLLYAINEGQG 223 +LP TC N + +PPY + E +++KLL A+ E G Sbjct: 713 DANTDNLPKAHTCFNRIDIPPYESYEKLYEKLLTAVEETCG 753
>SMUF1_MOUSE (Q9CUN6) Smad ubiquitination regulatory factor 1 (EC 6.3.2.-)| (Ubiquitin--protein ligase SMURF1) (Smad-specific E3 ubiquitin ligase 1) Length = 731 Score = 53.9 bits (128), Expect = 5e-07 Identities = 41/161 (25%), Positives = 69/161 (42%), Gaps = 4/161 (2%) Frame = -3 Query: 693 AFKAGFNQVFDISSLQIFSPQELDYLICGRREL----WEPETLVEHIKFDHGYTSKSPAI 526 A + GFN++ L+ F +EL+ +I G ++ W+ T ++H D S + Sbjct: 580 ALQKGFNELIPQHLLKPFDQKELELIIGGLDKIDLNDWKSNTRLKHCVAD------SNIV 633 Query: 525 VNLLEIMTEFTPEQQHAFCQFVTGAPRLPPGGLASLNPKLTIVRKHXXXXXXXXXXXXXX 346 + + F E++ QFVTG+ R+P G +L Sbjct: 634 RWFWQAVETFDEERRARLLQFVTGSTRVPLQGFKALQGS-------TGAAGPRLFTIHLI 686 Query: 345 XXXXXDLPSVMTCANYLKLPPYSTKEVMHKKLLYAINEGQG 223 +LP TC N + +PPY + E +++KLL A+ E G Sbjct: 687 DANTDNLPKAHTCFNRIDIPPYESYEKLYEKLLTAVEETCG 727
>RSP5_YEAST (P39940) E3 ubiquitin--protein ligase RSP5 (EC 6.3.2.-)| Length = 809 Score = 53.5 bits (127), Expect = 6e-07 Identities = 44/161 (27%), Positives = 66/161 (40%), Gaps = 4/161 (2%) Frame = -3 Query: 693 AFKAGFNQVFDISSLQIFSPQELDYLICGRRELWEPETLVEHIKFDHGYTSKSPAIVNLL 514 AF GFN++ + +F +EL+ LI G E+ + E +H + GY I Sbjct: 662 AFMDGFNELIPEDLVTVFDERELELLIGGIAEI-DIEDWKKHTDY-RGYQESDEVIQWFW 719 Query: 513 EIMTEFTPEQQHAFCQFVTGAPRLPPGGLASL----NPKLTIVRKHXXXXXXXXXXXXXX 346 + ++E+ EQ+ QF TG R+P G L P+ + K Sbjct: 720 KCVSEWDNEQRARLLQFTTGTSRIPVNGFKDLQGSDGPRRFTIEK--------------- 764 Query: 345 XXXXXDLPSVMTCANYLKLPPYSTKEVMHKKLLYAINEGQG 223 LP TC N + LP Y + M +KL A+ E G Sbjct: 765 AGEVQQLPKSHTCFNRVDLPQYVDYDSMKQKLTLAVEETIG 805
>HERC2_HUMAN (O95714) HECT domain and RCC1-like domain-containing protein 2| Length = 4834 Score = 53.5 bits (127), Expect = 6e-07 Identities = 41/153 (26%), Positives = 69/153 (45%) Frame = -3 Query: 693 AFKAGFNQVFDISSLQIFSPQELDYLICGRRELWEPETLVEHIKFDHGYTSKSPAIVNLL 514 A + G +V + L +F+ EL+ ++CG ++ P L++ + G + I Sbjct: 4648 AVREGMARVVPVPLLSLFTGYELETMVCGSPDI--PLHLLKSVATYKGIEPSASLIQWFW 4705 Query: 513 EIMTEFTPEQQHAFCQFVTGAPRLPPGGLASLNPKLTIVRKHXXXXXXXXXXXXXXXXXX 334 E+M F+ ++ F +FV G RLP +A + +++ Sbjct: 4706 EVMESFSNTERSLFLRFVWGRTRLPRT-IADFRGRDFVIQ-----------VLDKYNPPD 4753 Query: 333 XDLPSVMTCANYLKLPPYSTKEVMHKKLLYAIN 235 LP TC LKLP YS K+V+ +KL YAI+ Sbjct: 4754 HFLPESYTCFFLLKLPRYSCKQVLEEKLKYAIH 4786
>HERC2_MOUSE (Q4U2R1) HECT domain and RCC1-like domain-containing protein 2| Length = 4836 Score = 53.1 bits (126), Expect = 8e-07 Identities = 40/153 (26%), Positives = 69/153 (45%) Frame = -3 Query: 693 AFKAGFNQVFDISSLQIFSPQELDYLICGRRELWEPETLVEHIKFDHGYTSKSPAIVNLL 514 A + G +V + L +F+ EL+ ++CG ++ P L++ + G + + Sbjct: 4650 AVREGMARVVPVPLLSLFTGYELETMVCGSPDI--PLHLLKSVATYKGIEPSASLVQWFW 4707 Query: 513 EIMTEFTPEQQHAFCQFVTGAPRLPPGGLASLNPKLTIVRKHXXXXXXXXXXXXXXXXXX 334 E+M F+ ++ F +FV G RLP +A + +++ Sbjct: 4708 EVMESFSNTERSLFLRFVWGRTRLPRT-IADFRGRDFVIQ-----------VLDKYNPPD 4755 Query: 333 XDLPSVMTCANYLKLPPYSTKEVMHKKLLYAIN 235 LP TC LKLP YS K+V+ +KL YAI+ Sbjct: 4756 HFLPESYTCFFLLKLPRYSCKQVLEEKLKYAIH 4788
>NEDD4_DROME (Q9VVI3) E3 ubiquitin-protein ligase Nedd-4 (EC 6.3.2.-) (DNedd4)| Length = 1007 Score = 53.1 bits (126), Expect = 8e-07 Identities = 43/165 (26%), Positives = 63/165 (38%), Gaps = 8/165 (4%) Frame = -3 Query: 693 AFKAGFNQVFDISSLQIFSPQELDYLICGRREL----WEPETLVEHIKFDHGYTSKSPAI 526 +F GF + ++ ++IF EL+ L+CG + + W TL + Y I Sbjct: 858 SFLDGFGSIIPLNLIKIFDEHELELLMCGIQNIDVKDWRENTL-----YKGDYHMNHIII 912 Query: 525 VNLLEIMTEFTPEQQHAFCQFVTGAPRLPPGGLASL----NPKLTIVRKHXXXXXXXXXX 358 + F+ E + QFVTG R+P G L P++ + K Sbjct: 913 QWFWRAVLSFSNEMRSRLLQFVTGTSRVPMNGFKELYGSNGPQMFTIEKWGTPNN----- 967 Query: 357 XXXXXXXXXDLPSVMTCANYLKLPPYSTKEVMHKKLLYAINEGQG 223 P TC N L LPPY + KL+ AI QG Sbjct: 968 ----------FPRAHTCFNRLDLPPYEGYLQLKDKLIKAIEGSQG 1002
>SMUF1_DROME (Q9V853) E3 ubiquitin-protein ligase Smurf1 (EC 6.3.2.-) (Smad| ubiquitination regulatory factor 1 homolog) (DSmurf) (Lethal with a checkpoint kinase protein) Length = 1061 Score = 52.0 bits (123), Expect = 2e-06 Identities = 39/161 (24%), Positives = 68/161 (42%), Gaps = 4/161 (2%) Frame = -3 Query: 693 AFKAGFNQVFDISSLQIFSPQELDYLICGRREL----WEPETLVEHIKFDHGYTSKSPAI 526 A + GF ++ L+ F +EL+ +I G + W T ++H T+++ + Sbjct: 909 ALQKGFCELIPSHLLRPFDERELELVIGGISSIDVNDWRNNTRLKHC------TNETTQV 962 Query: 525 VNLLEIMTEFTPEQQHAFCQFVTGAPRLPPGGLASLNPKLTIVRKHXXXXXXXXXXXXXX 346 + +++ ++ E + QFVTG+ R+P G +L V Sbjct: 963 LWFWQVVESYSSEMRARLLQFVTGSSRVPLQGFRALQGSTGAVGPRLFTIHLTADVPTQN 1022 Query: 345 XXXXXDLPSVMTCANYLKLPPYSTKEVMHKKLLYAINEGQG 223 LP TC N + LPPY T +++ KL A+ E G Sbjct: 1023 ------LPKAHTCFNRIDLPPYETYQLLCDKLTQAVEETCG 1057
>EDD1_RAT (Q62671) Ubiquitin-protein ligase EDD1 (EC 6.3.2.-) (Hyperplastic| discs protein homolog) (100 kDa protein) (Fragment) Length = 920 Score = 32.7 bits (73), Expect = 1.1 Identities = 14/30 (46%), Positives = 22/30 (73%) Frame = -3 Query: 327 LPSVMTCANYLKLPPYSTKEVMHKKLLYAI 238 LP+ TC + L +P YS+K+++ +KLL AI Sbjct: 883 LPTANTCISRLYVPLYSSKQILKQKLLLAI 912
>EDD1_HUMAN (O95071) Ubiquitin-protein ligase EDD1 (EC 6.3.2.-) (Hyperplastic| discs protein homolog) (hHYD) (Progestin-induced protein) Length = 2799 Score = 32.7 bits (73), Expect = 1.1 Identities = 14/30 (46%), Positives = 22/30 (73%) Frame = -3 Query: 327 LPSVMTCANYLKLPPYSTKEVMHKKLLYAI 238 LP+ TC + L +P YS+K+++ +KLL AI Sbjct: 2762 LPTANTCISRLYVPLYSSKQILKQKLLLAI 2791
>HYD_DROME (P51592) Ubiquitin--protein ligase hyd (EC 6.3.2.-) (Protein| hyperplastic discs) Length = 2885 Score = 32.7 bits (73), Expect = 1.1 Identities = 37/165 (22%), Positives = 65/165 (39%), Gaps = 6/165 (3%) Frame = -3 Query: 693 AFKAGFNQVFDISSLQIFSPQELDYLICGRRELWEPETLVEHIKFDHGYTSKSPAIVNLL 514 A K G V +S+ + ++L L+ G ++ TL+ + F+ + ++ Sbjct: 2739 ALKDGVFDVLPDNSMINLTAEDLRLLLNGVGDI-NVSTLISYTTFNDESSEGPDKLLKFK 2797 Query: 513 E----IMTEFTPEQQHAFCQFVTGAPRLPPG--GLASLNPKLTIVRKHXXXXXXXXXXXX 352 + I+ + ++ F TG+P LP G L P +TI Sbjct: 2798 KWFWSIVEKMNIMERQDLVYFWTGSPALPASEEGFQPL-PSVTI---------------- 2840 Query: 351 XXXXXXXDLPSVMTCANYLKLPPYSTKEVMHKKLLYAINEGQGSF 217 LP+ TC + L +P YS+K ++ K+L AI F Sbjct: 2841 -RPADDSHLPTANTCISRLYIPLYSSKSILRSKMLMAIKSKNFGF 2884
>EDD1_MOUSE (Q80TP3) Ubiquitin-protein ligase EDD1 (EC 6.3.2.-) (Hyperplastic| discs protein homolog) Length = 2792 Score = 32.7 bits (73), Expect = 1.1 Identities = 14/30 (46%), Positives = 22/30 (73%) Frame = -3 Query: 327 LPSVMTCANYLKLPPYSTKEVMHKKLLYAI 238 LP+ TC + L +P YS+K+++ +KLL AI Sbjct: 2755 LPTANTCISRLYVPLYSSKQILKQKLLLAI 2784
>TBA3_MAIZE (P22275) Tubulin alpha-3 chain (Alpha-3 tubulin)| Length = 450 Score = 30.8 bits (68), Expect = 4.1 Identities = 15/37 (40%), Positives = 21/37 (56%) Frame = +3 Query: 120 HDDNEQTN*IKTGAHLHVHQHLYVSFEPTMKDQTTPG 230 HDD T +TGA HV + ++V EPT+ D+ G Sbjct: 45 HDDAFSTFFSQTGAGKHVPRAIFVDLEPTVIDEVRTG 81
>RMAR_SACCA (Q8M355) Mitochondrial ribosomal protein VAR1| Length = 326 Score = 30.4 bits (67), Expect = 5.4 Identities = 18/61 (29%), Positives = 32/61 (52%) Frame = +1 Query: 19 KCPGNXVENVISTGTTRSRL*TFHKRNDLKPMLYMTTMNKLTE*KLVRIYMCTNICMLVL 198 K N ++++ + ++ ++K N+L M+ M MNKL KL+ + M N+ M V Sbjct: 41 KYMNNKLQSINNMNNWSLQMYNYNKNNELNMMMMMNMMNKLLY-KLMNMIMINNMTMNVN 99 Query: 199 N 201 N Sbjct: 100 N 100
>TBA_BOMMO (P52273) Tubulin alpha chain| Length = 450 Score = 30.0 bits (66), Expect = 7.0 Identities = 15/36 (41%), Positives = 21/36 (58%) Frame = +3 Query: 123 DDNEQTN*IKTGAHLHVHQHLYVSFEPTMKDQTTPG 230 DD+ T +TGA HV + L+V EPT+ D+ G Sbjct: 46 DDSFNTFFSETGAGKHVPRALFVDLEPTVVDEVRTG 81
>TBA5_CHICK (P09644) Tubulin alpha-5 chain| Length = 448 Score = 29.6 bits (65), Expect = 9.1 Identities = 14/37 (37%), Positives = 22/37 (59%) Frame = +3 Query: 123 DDNEQTN*IKTGAHLHVHQHLYVSFEPTMKDQTTPGL 233 DD+ T +TGA HV + ++V EPT+ D+ G+ Sbjct: 46 DDSFTTFFCETGAGKHVPRAIFVDLEPTVIDEVRAGI 82
>TBA_ONCKE (P30436) Tubulin alpha chain| Length = 444 Score = 29.6 bits (65), Expect = 9.1 Identities = 14/37 (37%), Positives = 22/37 (59%) Frame = +3 Query: 123 DDNEQTN*IKTGAHLHVHQHLYVSFEPTMKDQTTPGL 233 DD+ T +TGA HV + ++V EPT+ D+ G+ Sbjct: 40 DDSFNTFFSETGAGKHVPRAIFVDLEPTVIDEVRTGI 76
>KRA3_CAPHI (P02442) Keratin, high-sulfur matrix protein, IIIA3 (M2.6 protein)| Length = 132 Score = 29.6 bits (65), Expect = 9.1 Identities = 15/36 (41%), Positives = 17/36 (47%), Gaps = 1/36 (2%) Frame = -2 Query: 181 CWCTCKCAPVFIQL-VCSLSSCIT*ALSRFFCERFR 77 CW T C PV +Q C +SC SR C FR Sbjct: 92 CWATTCCQPVSVQCPCCRPTSCQPAPCSRTTCRTFR 127
>KRA3_SHEEP (P02441) Keratin, high-sulfur matrix protein, IIIA3| Length = 131 Score = 29.6 bits (65), Expect = 9.1 Identities = 15/36 (41%), Positives = 17/36 (47%), Gaps = 1/36 (2%) Frame = -2 Query: 181 CWCTCKCAPVFIQL-VCSLSSCIT*ALSRFFCERFR 77 CW T C PV +Q C +SC SR C FR Sbjct: 91 CWATTCCQPVSVQCPCCRPTSCQPAPCSRTTCRTFR 126 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 87,985,451 Number of Sequences: 219361 Number of extensions: 1669749 Number of successful extensions: 4187 Number of sequences better than 10.0: 61 Number of HSP's better than 10.0 without gapping: 4014 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4117 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 6912958834 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
