Clone Information

BLAST Search Result

Clone Name	rbasd22f20
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	SUI1_ORYSA (P33278) Protein translation factor SUI1 homolog (GOS...	209	4e-54
2	SUI1_SPOST (Q9SM41) Protein translation factor SUI1 homolog	208	1e-53
3	SUI1_MAIZE (P56330) Protein translation factor SUI1 homolog (GOS...	207	2e-53
4	SUI1_SALBA (O48650) Protein translation factor SUI1 homolog	200	3e-51
5	SUI12_ARATH (Q94JV4) Protein translation factor SUI1 homolog 2	196	5e-50
6	SUI11_ARATH (P41568) Protein translation factor SUI1 homolog 1	193	3e-49
7	SUI1_BRAOL (Q9SQF4) Protein translation factor SUI1 homolog (Tra...	191	1e-48
8	SUI1_PIMBR (O82569) Protein translation factor SUI1 homolog	169	5e-42
9	EIF1_PONPY (Q5RFF4) Eukaryotic translation initiation factor 1 (...	136	6e-32
10	EIF1_HUMAN (P41567) Eukaryotic translation initiation factor 1 (...	136	6e-32
11	EIF1_BOVIN (Q5E938) Eukaryotic translation initiation factor 1 (...	136	6e-32
12	EIF1B_PIG (P61220) Eukaryotic translation initiation factor 1b (...	136	6e-32
13	EIF1B_MOUSE (Q9CXU9) Eukaryotic translation initiation factor 1b...	136	6e-32
14	EIF1B_MACFA (Q4R4X9) Eukaryotic translation initiation factor 1b...	136	6e-32
15	EIF1B_HUMAN (O60739) Eukaryotic translation initiation factor 1b...	136	6e-32
16	EIF1_MOUSE (P48024) Eukaryotic translation initiation factor 1 (...	135	8e-32
17	SUI1_ANOGA (P42678) Protein translation factor SUI1 homolog	123	5e-28
18	SUI1_YEAST (P32911) Protein translation factor SUI1	120	3e-27
19	SUI1_DROME (Q9VZS3) Protein translation factor SUI1 homolog	120	5e-27
20	SUI1_ASHGO (Q755R1) Protein translation factor SUI1	116	5e-26
21	SUI1_SCHPO (P79060) Protein translation factor sui1	115	9e-26
22	EIF1_CHICK (P51971) Eukaryotic translation initiation factor 1 (...	109	6e-24
23	SUI1_THEVO (Q97BW9) Protein translation factor SUI1 homolog	43	7e-04
24	SUI1_PYRFU (Q8U006) Protein translation factor SUI1 homolog	42	0.002
25	SUI1_HALMA (Q5UZP9) Protein translation factor SUI1 homolog	42	0.002
26	SUI1_HALSA (Q9HME3) Protein translation factor SUI1 homolog	41	0.003
27	SUI1_PYRHO (P58193) Protein translation factor SUI1 homolog	40	0.005
28	Y546_SYNY3 (Q55397) Hypothetical protein sll0546	40	0.006
29	SUI1_PYRKO (Q5JDH7) Protein translation factor SUI1 homolog	40	0.006
30	SUI1_PYRAB (Q9V1U3) Protein translation factor SUI1 homolog	39	0.010
31	SUI1_PICTO (Q6L1B9) Protein translation factor SUI1 homolog	39	0.013
32	SUI1_METMA (Q8PYK3) Protein translation factor SUI1 homolog	37	0.051
33	SUI1_METAC (Q8TIT3) Protein translation factor SUI1 homolog	37	0.051
34	MRTFB_XENLA (Q8AYC1) Myocardin-related transcription factor B (M...	33	0.73
35	SUI1_METKA (Q8TX33) Protein translation factor SUI1 homolog	33	0.73
36	YCIH_SALTY (P0A2G7) Protein yciH	32	1.3
37	YCIH_SALTI (P0A2G8) Protein yciH	32	1.3
38	DENR_SCHPO (O42929) Density-regulated protein homolog	32	2.1
39	OR2J1_HUMAN (Q9GZK6) Olfactory receptor 2J1 (Olfactory receptor ...	32	2.1
40	LYB_BACSU (P10773) B-enzyme (Lysozyme) (EC 3.2.1.17)	30	6.2
41	CYA1_DROME (P32870) Ca(2+)/calmodulin-responsive adenylate cycla...	30	6.2
42	OSBP2_MOUSE (Q5QNQ6) Oxysterol-binding protein 2	30	8.1
43	OR2J3_HUMAN (O76001) Olfactory receptor 2J3 (Olfactory receptor ...	30	8.1
44	YCIH_ECOLI (P08245) Protein yciH	30	8.1
45	SGP50_RAT (Q04807) Sulfated 50 kDa glycoprotein precursor (SGP50...	30	8.1
46	PROP_MOUSE (P11680) Properdin precursor (Factor P)	30	8.1
47	ARGR2_YEAST (P05085) Arginine metabolism regulation protein II	30	8.1

>SUI1_ORYSA (P33278) Protein translation factor SUI1 homolog (GOS2 protein)|
          Length = 115

 Score =  209 bits (533), Expect = 4e-54
 Identities = 102/115 (88%), Positives = 108/115 (93%)
 Frame = -2

Query: 558 MSDLDVTLPSAFDPFAEANAEDAGAGPGAKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNK 379
           MSDLD+ +P+AFDPFAEANA D+GA  G+KDYVHVRIQQRNGRKSLTTVQGLKKEFSYNK
Sbjct: 1   MSDLDIQIPTAFDPFAEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNK 60

Query: 378 ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVATFLVQAGIAKKELIKIHGF 214
           ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNV+ FLVQAGI KKE IKIHGF
Sbjct: 61  ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 115

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>SUI1_SPOST (Q9SM41) Protein translation factor SUI1 homolog|
          Length = 115

 Score =  208 bits (530), Expect = 1e-53
 Identities = 101/115 (87%), Positives = 108/115 (93%)
 Frame = -2

Query: 558 MSDLDVTLPSAFDPFAEANAEDAGAGPGAKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNK 379
           MSDLD+ +P+AFDPF+EANA D+GA  G+KDYVHVRIQQRNGRKSLTTVQGLKKEFSYNK
Sbjct: 1   MSDLDIQIPTAFDPFSEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNK 60

Query: 378 ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVATFLVQAGIAKKELIKIHGF 214
           ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNV+ FLVQAGI KKE IKIHGF
Sbjct: 61  ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 115

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>SUI1_MAIZE (P56330) Protein translation factor SUI1 homolog (GOS2 protein)|
          Length = 115

 Score =  207 bits (528), Expect = 2e-53
 Identities = 101/115 (87%), Positives = 108/115 (93%)
 Frame = -2

Query: 558 MSDLDVTLPSAFDPFAEANAEDAGAGPGAKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNK 379
           MSDLD+ +P+AFDPFAEANA D+GA  G+KDYVHVRIQQRNGRKSLTTVQGLKKEFSY+K
Sbjct: 1   MSDLDIQIPTAFDPFAEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYSK 60

Query: 378 ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVATFLVQAGIAKKELIKIHGF 214
           ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNV+ FLVQAGI KKE IKIHGF
Sbjct: 61  ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 115

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>SUI1_SALBA (O48650) Protein translation factor SUI1 homolog|
          Length = 113

 Score =  200 bits (508), Expect = 3e-51
 Identities = 98/115 (85%), Positives = 107/115 (93%)
 Frame = -2

Query: 558 MSDLDVTLPSAFDPFAEANAEDAGAGPGAKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNK 379
           MS+ D  +P+AFDPFAEANAED+GAG   KDYVHVR+QQRNGRKSLTTVQGLKK++SYNK
Sbjct: 1   MSEFDNAIPTAFDPFAEANAEDSGAG--TKDYVHVRVQQRNGRKSLTTVQGLKKDYSYNK 58

Query: 378 ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVATFLVQAGIAKKELIKIHGF 214
           ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNV++FLVQAGI KKE IKIHGF
Sbjct: 59  ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSSFLVQAGIVKKENIKIHGF 113

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>SUI12_ARATH (Q94JV4) Protein translation factor SUI1 homolog 2|
          Length = 113

 Score =  196 bits (498), Expect = 5e-50
 Identities = 95/115 (82%), Positives = 108/115 (93%)
 Frame = -2

Query: 558 MSDLDVTLPSAFDPFAEANAEDAGAGPGAKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNK 379
           MSDL+V +P+AFDPFA+ANAED+GAG   K+YVH+R+QQRNGRKSLTTVQGLKKE+SY+K
Sbjct: 1   MSDLEVQVPTAFDPFADANAEDSGAG--TKEYVHIRVQQRNGRKSLTTVQGLKKEYSYSK 58

Query: 378 ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVATFLVQAGIAKKELIKIHGF 214
           ILKDLKKEFCCNGTVVQD ELGQVIQLQGDQRKNV+TFLVQAG+ KK+ IKIHGF
Sbjct: 59  ILKDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113

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>SUI11_ARATH (P41568) Protein translation factor SUI1 homolog 1|
          Length = 113

 Score =  193 bits (491), Expect = 3e-49
 Identities = 94/115 (81%), Positives = 106/115 (92%)
 Frame = -2

Query: 558 MSDLDVTLPSAFDPFAEANAEDAGAGPGAKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNK 379
           MS+LD  +P+AFDPFA+ANAED+GAG   K+YVH+R+QQRNGRKSLTTVQGLKKE+SY K
Sbjct: 1   MSELDSQVPTAFDPFADANAEDSGAG--TKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTK 58

Query: 378 ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVATFLVQAGIAKKELIKIHGF 214
           ILKDLKKEFCCNGTVVQD ELGQVIQLQGDQRKNV+TFLVQAG+ KK+ IKIHGF
Sbjct: 59  ILKDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113

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>SUI1_BRAOL (Q9SQF4) Protein translation factor SUI1 homolog (Translation|
           initiation factor nps45)
          Length = 113

 Score =  191 bits (486), Expect = 1e-48
 Identities = 93/115 (80%), Positives = 106/115 (92%)
 Frame = -2

Query: 558 MSDLDVTLPSAFDPFAEANAEDAGAGPGAKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNK 379
           MS+LD  +P+AFDPFA+ANAED+GAG   K+YVH+R+QQRNGRKSLTTVQGLKKE+SY K
Sbjct: 1   MSELDSQVPTAFDPFADANAEDSGAG--TKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTK 58

Query: 378 ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVATFLVQAGIAKKELIKIHGF 214
           ILKDLKKEFCCNGTVVQD ELGQVIQLQGDQRKNV+TFLVQAG+ KK+ I+IHGF
Sbjct: 59  ILKDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDDIQIHGF 113

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>SUI1_PIMBR (O82569) Protein translation factor SUI1 homolog|
          Length = 113

 Score =  169 bits (429), Expect = 5e-42
 Identities = 83/115 (72%), Positives = 95/115 (82%)
 Frame = -2

Query: 558 MSDLDVTLPSAFDPFAEANAEDAGAGPGAKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNK 379
           M D D+ +P++FDPFAEA   DA      K+YVH+RIQQRNGRKSLTTVQGLKKE SY+K
Sbjct: 1   MVDSDIQIPTSFDPFAEAEITDATGS--TKEYVHIRIQQRNGRKSLTTVQGLKKELSYDK 58

Query: 378 ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVATFLVQAGIAKKELIKIHGF 214
           ILKDLKK  CCNGTVV D ELG+VIQLQGDQRKNV+TF+VQAGI KK+ IK+H F
Sbjct: 59  ILKDLKKALCCNGTVVNDKELGKVIQLQGDQRKNVSTFIVQAGIVKKDQIKVHNF 113

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>EIF1_PONPY (Q5RFF4) Eukaryotic translation initiation factor 1 (eIF1) (Protein|
           translation factor SUI1 homolog)
          Length = 113

 Score =  136 bits (342), Expect = 6e-32
 Identities = 60/105 (57%), Positives = 82/105 (78%)
 Frame = -2

Query: 528 AFDPFAEANAEDAGAGPGAKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFC 349
           +FDPFA+A+  D     G +DY+H+RIQQRNGRK+LTTVQG+  ++   K++K  KK+F 
Sbjct: 9   SFDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFA 68

Query: 348 CNGTVVQDPELGQVIQLQGDQRKNVATFLVQAGIAKKELIKIHGF 214
           CNGTV++ PE G+VIQLQGDQRKN+  FLV+ G+AK + +K+HGF
Sbjct: 69  CNGTVIEHPEYGEVIQLQGDQRKNICQFLVEIGLAKDDQLKVHGF 113

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>EIF1_HUMAN (P41567) Eukaryotic translation initiation factor 1 (eIF1) (Protein|
           translation factor SUI1 homolog) (Sui1iso1) (A121)
          Length = 113

 Score =  136 bits (342), Expect = 6e-32
 Identities = 60/105 (57%), Positives = 82/105 (78%)
 Frame = -2

Query: 528 AFDPFAEANAEDAGAGPGAKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFC 349
           +FDPFA+A+  D     G +DY+H+RIQQRNGRK+LTTVQG+  ++   K++K  KK+F 
Sbjct: 9   SFDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFA 68

Query: 348 CNGTVVQDPELGQVIQLQGDQRKNVATFLVQAGIAKKELIKIHGF 214
           CNGTV++ PE G+VIQLQGDQRKN+  FLV+ G+AK + +K+HGF
Sbjct: 69  CNGTVIEHPEYGEVIQLQGDQRKNICQFLVEIGLAKDDQLKVHGF 113

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>EIF1_BOVIN (Q5E938) Eukaryotic translation initiation factor 1 (eIF1) (Protein|
           translation factor SUI1 homolog)
          Length = 113

 Score =  136 bits (342), Expect = 6e-32
 Identities = 60/105 (57%), Positives = 82/105 (78%)
 Frame = -2

Query: 528 AFDPFAEANAEDAGAGPGAKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFC 349
           +FDPFA+A+  D     G +DY+H+RIQQRNGRK+LTTVQG+  ++   K++K  KK+F 
Sbjct: 9   SFDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFA 68

Query: 348 CNGTVVQDPELGQVIQLQGDQRKNVATFLVQAGIAKKELIKIHGF 214
           CNGTV++ PE G+VIQLQGDQRKN+  FLV+ G+AK + +K+HGF
Sbjct: 69  CNGTVIEHPEYGEVIQLQGDQRKNICQFLVEIGLAKDDQLKVHGF 113

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>EIF1B_PIG (P61220) Eukaryotic translation initiation factor 1b (eIF1b)|
           (Protein translation factor SUI1 homolog GC20)
          Length = 113

 Score =  136 bits (342), Expect = 6e-32
 Identities = 60/105 (57%), Positives = 81/105 (77%)
 Frame = -2

Query: 528 AFDPFAEANAEDAGAGPGAKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFC 349
           +FDPFA+A   D     G +DY+H+RIQQRNGRK+LTTVQG+  ++   K++K  KK+F 
Sbjct: 9   SFDPFADATKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFA 68

Query: 348 CNGTVVQDPELGQVIQLQGDQRKNVATFLVQAGIAKKELIKIHGF 214
           CNGTV++ PE G+VIQLQGDQRKN+  FL++ GI K+E +K+HGF
Sbjct: 69  CNGTVIEHPEYGEVIQLQGDQRKNICQFLLEVGIVKEEQLKVHGF 113

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>EIF1B_MOUSE (Q9CXU9) Eukaryotic translation initiation factor 1b (eIF1b)|
          Length = 113

 Score =  136 bits (342), Expect = 6e-32
 Identities = 60/105 (57%), Positives = 81/105 (77%)
 Frame = -2

Query: 528 AFDPFAEANAEDAGAGPGAKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFC 349
           +FDPFA+A   D     G +DY+H+RIQQRNGRK+LTTVQG+  ++   K++K  KK+F 
Sbjct: 9   SFDPFADATKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFA 68

Query: 348 CNGTVVQDPELGQVIQLQGDQRKNVATFLVQAGIAKKELIKIHGF 214
           CNGTV++ PE G+VIQLQGDQRKN+  FL++ GI K+E +K+HGF
Sbjct: 69  CNGTVIEHPEYGEVIQLQGDQRKNICQFLLEVGIVKEEQLKVHGF 113

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>EIF1B_MACFA (Q4R4X9) Eukaryotic translation initiation factor 1b (eIF1b)|
          Length = 113

 Score =  136 bits (342), Expect = 6e-32
 Identities = 60/105 (57%), Positives = 81/105 (77%)
 Frame = -2

Query: 528 AFDPFAEANAEDAGAGPGAKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFC 349
           +FDPFA+A   D     G +DY+H+RIQQRNGRK+LTTVQG+  ++   K++K  KK+F 
Sbjct: 9   SFDPFADATKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFA 68

Query: 348 CNGTVVQDPELGQVIQLQGDQRKNVATFLVQAGIAKKELIKIHGF 214
           CNGTV++ PE G+VIQLQGDQRKN+  FL++ GI K+E +K+HGF
Sbjct: 69  CNGTVIEHPEYGEVIQLQGDQRKNICQFLLEVGIVKEEQLKVHGF 113

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>EIF1B_HUMAN (O60739) Eukaryotic translation initiation factor 1b (eIF1b)|
           (Protein translation factor SUI1 homolog GC20)
          Length = 113

 Score =  136 bits (342), Expect = 6e-32
 Identities = 60/105 (57%), Positives = 81/105 (77%)
 Frame = -2

Query: 528 AFDPFAEANAEDAGAGPGAKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFC 349
           +FDPFA+A   D     G +DY+H+RIQQRNGRK+LTTVQG+  ++   K++K  KK+F 
Sbjct: 9   SFDPFADATKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFA 68

Query: 348 CNGTVVQDPELGQVIQLQGDQRKNVATFLVQAGIAKKELIKIHGF 214
           CNGTV++ PE G+VIQLQGDQRKN+  FL++ GI K+E +K+HGF
Sbjct: 69  CNGTVIEHPEYGEVIQLQGDQRKNICQFLLEVGIVKEEQLKVHGF 113

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>EIF1_MOUSE (P48024) Eukaryotic translation initiation factor 1 (eIF1) (Protein|
           translation factor SUI1 homolog)
          Length = 113

 Score =  135 bits (341), Expect = 8e-32
 Identities = 59/105 (56%), Positives = 82/105 (78%)
 Frame = -2

Query: 528 AFDPFAEANAEDAGAGPGAKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFC 349
           +FDPFA+A+  D     G +DY+H+RIQQRNGRK+LTTVQG+  ++   K++K  KK+F 
Sbjct: 9   SFDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFA 68

Query: 348 CNGTVVQDPELGQVIQLQGDQRKNVATFLVQAGIAKKELIKIHGF 214
           CNGTV++ PE G+VIQLQGDQRKN+  FL++ G+AK + +K+HGF
Sbjct: 69  CNGTVIEHPEYGEVIQLQGDQRKNICQFLIEIGLAKDDQLKVHGF 113

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>SUI1_ANOGA (P42678) Protein translation factor SUI1 homolog|
          Length = 110

 Score =  123 bits (308), Expect = 5e-28
 Identities = 60/107 (56%), Positives = 80/107 (74%), Gaps = 1/107 (0%)
 Frame = -2

Query: 531 SAFDPFAEANAEDAGAGPGAKD-YVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKE 355
           + FDPFA+A     GA    +D  VH+RIQQRNGRK+LTTVQGL  E+   KI++  KKE
Sbjct: 7   NTFDPFADAIK---GADYDVQDGLVHIRIQQRNGRKTLTTVQGLSAEYDLKKIVRACKKE 63

Query: 354 FCCNGTVVQDPELGQVIQLQGDQRKNVATFLVQAGIAKKELIKIHGF 214
           F CNGTV++ PE G+V+QLQGDQR+N+  +L ++G+AK E +K+HGF
Sbjct: 64  FACNGTVIEHPEYGEVLQLQGDQRENICQWLTKSGLAKPEQLKVHGF 110

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>SUI1_YEAST (P32911) Protein translation factor SUI1|
          Length = 108

 Score =  120 bits (302), Expect = 3e-27
 Identities = 58/106 (54%), Positives = 79/106 (74%), Gaps = 1/106 (0%)
 Frame = -2

Query: 528 AFDPFAEANAEDAGAGPGAKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFC 349
           +FDPFA+   ++        +Y+H+RIQQRNGRK+LTTVQG+ +E+   +ILK LKK+F 
Sbjct: 8   SFDPFADTGDDETATS----NYIHIRIQQRNGRKTLTTVQGVPEEYDLKRILKVLKKDFA 63

Query: 348 CNGTVVQDPELGQVIQLQGDQRKNVATFLV-QAGIAKKELIKIHGF 214
           CNG +V+DPE+G++IQLQGDQR  V  F++ Q G+ KK  IKIHGF
Sbjct: 64  CNGNIVKDPEMGEIIQLQGDQRAKVCEFMISQLGLQKKN-IKIHGF 108

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>SUI1_DROME (Q9VZS3) Protein translation factor SUI1 homolog|
          Length = 110

 Score =  120 bits (300), Expect = 5e-27
 Identities = 58/106 (54%), Positives = 77/106 (72%), Gaps = 3/106 (2%)
 Frame = -2

Query: 522 DPFAEA---NAEDAGAGPGAKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEF 352
           DPFA+A   N +D   G      VH+RIQQRNGRK+LTTVQGL  E+   KI++  KKEF
Sbjct: 10  DPFADAIKGNDDDIQDG-----LVHIRIQQRNGRKTLTTVQGLSAEYDLKKIVRSCKKEF 64

Query: 351 CCNGTVVQDPELGQVIQLQGDQRKNVATFLVQAGIAKKELIKIHGF 214
            CNGTV++ PE G+V+QLQGDQR+N+  +L + G+AK + +K+HGF
Sbjct: 65  ACNGTVIEHPEYGEVLQLQGDQRENICQWLTKVGLAKPDQLKVHGF 110

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>SUI1_ASHGO (Q755R1) Protein translation factor SUI1|
          Length = 108

 Score =  116 bits (291), Expect = 5e-26
 Identities = 55/105 (52%), Positives = 77/105 (73%)
 Frame = -2

Query: 528 AFDPFAEANAEDAGAGPGAKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFC 349
           +FDPFA+   ++A +     +Y+H+RIQQRNGRK+LTTVQG+ +E+   +ILK L+K+F 
Sbjct: 8   SFDPFADTGDDEASSS----NYIHIRIQQRNGRKTLTTVQGIPEEYDLKRILKVLRKDFG 63

Query: 348 CNGTVVQDPELGQVIQLQGDQRKNVATFLVQAGIAKKELIKIHGF 214
           CNG +V+D E+G++IQLQGDQR  V  FL+      K+ IKIHGF
Sbjct: 64  CNGNMVKDDEMGEIIQLQGDQRAKVCEFLITQLAIPKKNIKIHGF 108

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>SUI1_SCHPO (P79060) Protein translation factor sui1|
          Length = 109

 Score =  115 bits (289), Expect = 9e-26
 Identities = 59/103 (57%), Positives = 75/103 (72%)
 Frame = -2

Query: 522 DPFAEANAEDAGAGPGAKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCN 343
           DPFA+   +DA       + +H+RIQQRNGRK+LTTVQGL +EF   +IL+ LKK+F CN
Sbjct: 11  DPFADTGDDDAQP----LNNIHIRIQQRNGRKTLTTVQGLPREFDQKRILRALKKDFACN 66

Query: 342 GTVVQDPELGQVIQLQGDQRKNVATFLVQAGIAKKELIKIHGF 214
           GT+V+D +LG+VIQLQGDQR  V  FL Q    +K+ IKIHGF
Sbjct: 67  GTIVKDDDLGEVIQLQGDQRIKVMEFLTQQLGLQKKNIKIHGF 109

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>EIF1_CHICK (P51971) Eukaryotic translation initiation factor 1 (eIF1) (Protein|
           translation factor SUI1 homolog) (Fragment)
          Length = 79

 Score =  109 bits (273), Expect = 6e-24
 Identities = 48/79 (60%), Positives = 64/79 (81%)
 Frame = -2

Query: 450 IQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVA 271
           IQQRNGRK+LTTVQG+  ++   K++K  KK+F CNGTV++ PE G+VIQLQGDQRKN+ 
Sbjct: 1   IQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNIC 60

Query: 270 TFLVQAGIAKKELIKIHGF 214
            FLV+ G+AK + +K+HGF
Sbjct: 61  QFLVEIGLAKDDQLKVHGF 79

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>SUI1_THEVO (Q97BW9) Protein translation factor SUI1 homolog|
          Length = 100

 Score = 43.1 bits (100), Expect = 7e-04
 Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
 Frame = -2

Query: 462 VHVRIQQRNGRKSLTTVQGLKKEFS-YNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQ 286
           V + + +R   K +T ++G+  +     KI K+LKK+    GTV +    G++I+LQGD 
Sbjct: 26  VKIVVDKRRYGKFVTIIEGIDPKIEDIEKIAKELKKKVASGGTVKE----GRIIELQGDH 81

Query: 285 RKNVATFLVQAG 250
           R+ V  FL   G
Sbjct: 82  RQEVKKFLEDMG 93

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>SUI1_PYRFU (Q8U006) Protein translation factor SUI1 homolog|
          Length = 98

 Score = 42.0 bits (97), Expect = 0.002
 Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
 Frame = -2

Query: 471 KDYVHVRIQQRNGR--KSLTTVQGL-KKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQ 301
           K+   +R+     R  K  T ++G+ +KEF   +I K LK +  C GT          I+
Sbjct: 18  KEQQRIRVYTERARYGKIKTIIEGIDEKEFDLEEIAKKLKAKLACGGTAKNGR-----IE 72

Query: 300 LQGDQRKNVATFLVQAGIAKKELIKI 223
           LQGD R  +   LV+ G + +ELI++
Sbjct: 73  LQGDHRDRIKKLLVELGFS-EELIEV 97

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>SUI1_HALMA (Q5UZP9) Protein translation factor SUI1 homolog|
          Length = 97

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
 Frame = -2

Query: 462 VHVRIQQRNGRKSLTTVQGLK-KEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQ 286
           +++RI +R   K +T ++G   K+   + +  DLK +F C GTV    E GQ I+LQG+ 
Sbjct: 27  INIRIDERRYGKEVTIIEGFDPKDVDMDSLSSDLKSKFACGGTV----EDGQ-IELQGNH 81

Query: 285 RKNVATFLVQAG 250
              V  FL   G
Sbjct: 82  TGRVEDFLRDKG 93

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>SUI1_HALSA (Q9HME3) Protein translation factor SUI1 homolog|
          Length = 97

 Score = 41.2 bits (95), Expect = 0.003
 Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
 Frame = -2

Query: 462 VHVRIQQRNGRKSLTTVQGLK-KEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQ 286
           + +RI +R   K +T ++G   K+   + +  DLK +F C GT V+D E    I+LQG+ 
Sbjct: 27  IEIRIDERRYGKEVTVIEGFDPKDVDLDSLSSDLKSKFACGGT-VEDGE----IELQGNH 81

Query: 285 RKNVATFLVQAG 250
              V  FL   G
Sbjct: 82  SGRVEDFLRNKG 93

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>SUI1_PYRHO (P58193) Protein translation factor SUI1 homolog|
          Length = 99

 Score = 40.4 bits (93), Expect = 0.005
 Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
 Frame = -2

Query: 462 VHVRIQQRNGRKSLTTVQGL-KKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQ 286
           + V I++    K  T ++G+ +KEF   +I K LK +  C GT          I+LQGD 
Sbjct: 24  IKVYIERARYGKVKTIIEGIDEKEFDLEEIAKKLKAKLACGGTAKNGR-----IELQGDH 78

Query: 285 RKNVATFLVQAGIAKKELIKI 223
           R  +   L + G + +ELI++
Sbjct: 79  RDRIKKLLAELGFS-EELIEV 98

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>Y546_SYNY3 (Q55397) Hypothetical protein sll0546|
          Length = 111

 Score = 40.0 bits (92), Expect = 0.006
 Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
 Frame = -2

Query: 525 FDPFAEANAEDAGAGPGAKDYVHVRIQQ-RNGRK--SLTTVQGLKKEFSYNKILKDLKKE 355
           F P A+  +E+    P  +   +VRIQ  R+GRK  ++T V GL+      + L    K 
Sbjct: 15  FGPVADPLSEEQIDLPPQQQ--NVRIQATRSGRKGKTVTVVSGLQLSAMGQQALLKALKS 72

Query: 354 FCCNGTVVQDPELGQVIQLQGDQRKNVATFLVQAGIAKK 238
           FC +G  +++      +++QGDQR+ +  +L++ G   K
Sbjct: 73  FCGSGGTLKE----DCVEIQGDQREKILAYLLKQGYKAK 107

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>SUI1_PYRKO (Q5JDH7) Protein translation factor SUI1 homolog|
          Length = 98

 Score = 40.0 bits (92), Expect = 0.006
 Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
 Frame = -2

Query: 462 VHVRIQQRNGRKSLTTVQGL-KKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQ 286
           + V +++    K  T ++G+ +KEF    I K LK +  C GT          I+LQGD 
Sbjct: 23  IRVYVERARYGKLKTIIEGIDEKEFDLEDIAKKLKAKLACGGTAKNGR-----IELQGDH 77

Query: 285 RKNVATFLVQAGIAKKELIKI 223
           R  V   L + G + +ELI++
Sbjct: 78  RDRVKKLLAELGFS-EELIEV 97

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>SUI1_PYRAB (Q9V1U3) Protein translation factor SUI1 homolog|
          Length = 99

 Score = 39.3 bits (90), Expect = 0.010
 Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
 Frame = -2

Query: 471 KDYVHVRIQQRNGR--KSLTTVQGL-KKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQ 301
           K+   +R+     R  K  T ++G+ +KEF   +I K LK +  C GT          I+
Sbjct: 19  KEQQRIRVYTERARYGKIKTIIEGIDEKEFDLEEIAKKLKAKLACGGTAKNGR-----IE 73

Query: 300 LQGDQRKNVATFLVQAGIAKKELIKI 223
           LQGD R  +   L + G + ++LI++
Sbjct: 74  LQGDHRDRIKKLLAELGFS-EDLIEV 98

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>SUI1_PICTO (Q6L1B9) Protein translation factor SUI1 homolog|
          Length = 99

 Score = 38.9 bits (89), Expect = 0.013
 Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
 Frame = -2

Query: 468 DYVHVRIQQRNGRKSLTTVQGLK-KEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQG 292
           + V + + +R   K +T ++G+  K    N+I K LKK+    GTV      G++I+LQG
Sbjct: 24  EVVKISVDKRRYGKVVTLIEGIDPKVEDINEIAKSLKKKVASGGTVKD----GKIIELQG 79

Query: 291 DQRKNVATFLVQAG 250
           D R+     L   G
Sbjct: 80  DHRETARAQLESMG 93

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>SUI1_METMA (Q8PYK3) Protein translation factor SUI1 homolog|
          Length = 102

 Score = 37.0 bits (84), Expect = 0.051
 Identities = 20/78 (25%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
 Frame = -2

Query: 462 VHVRIQQRNGRKSLTTVQGLK-KEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQ 286
           + V++ +R   K +T V+G    E   +++   LK +F C GTV      G  ++LQG+ 
Sbjct: 28  ITVKVNRRRYGKEVTVVEGFDASEIDLHELSTYLKSKFACGGTV-----KGNTVELQGNH 82

Query: 285 RKNVATFLVQAGIAKKEL 232
              +   L++ G + +++
Sbjct: 83  LTRMKEVLMEKGFSAEQI 100

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>SUI1_METAC (Q8TIT3) Protein translation factor SUI1 homolog|
          Length = 102

 Score = 37.0 bits (84), Expect = 0.051
 Identities = 20/78 (25%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
 Frame = -2

Query: 462 VHVRIQQRNGRKSLTTVQGLK-KEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQ 286
           + V++ +R   K +T V+G    E   +++   LK +F C GTV      G  ++LQG+ 
Sbjct: 28  ITVKVNRRRYGKEVTVVEGFDASEIDLHELSTYLKSKFACGGTV-----KGNTVELQGNH 82

Query: 285 RKNVATFLVQAGIAKKEL 232
              +   L++ G + +++
Sbjct: 83  LARMKEVLMEKGFSAEQI 100

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>MRTFB_XENLA (Q8AYC1) Myocardin-related transcription factor B (MRTF-B)|
           (xMRTF-B)
          Length = 1067

 Score = 33.1 bits (74), Expect = 0.73
 Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
 Frame = -2

Query: 573 QQPSFMSDLDVTLPSAFDPFAEANAEDAGAGPGAKDYVHVRIQQRNGRKSLT---TVQGL 403
           Q P   S  D+      DP  E    D G+    K+ + +R+QQR  R+ L     +  L
Sbjct: 11  QPPQHYSFADILSAGDLDPLKEKEWLDPGSQKSLKEVLQLRLQQRRTREQLVDQGIMPPL 70

Query: 402 KKEFSYNKILKDLKK 358
           K   ++++ +K L++
Sbjct: 71  KSPAAFHEQIKSLER 85

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>SUI1_METKA (Q8TX33) Protein translation factor SUI1 homolog|
          Length = 106

 Score = 33.1 bits (74), Expect = 0.73
 Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
 Frame = -2

Query: 462 VHVRIQQRNGRKSLTTVQGLKKE-FSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQ 286
           + +  +Q    K +T ++GL        ++   LK+E  C GT  +    G++I LQGD 
Sbjct: 30  IKIYTEQVRPGKVVTIIEGLDDAGIDLQELASKLKRECACGGTAKE----GKII-LQGDH 84

Query: 285 RKNVATFLVQAGIAKKELIKI 223
           R  V  FL++     ++ I++
Sbjct: 85  RNKVREFLIKKEGFSEDAIEV 105

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>YCIH_SALTY (P0A2G7) Protein yciH|
          Length = 108

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
 Frame = -2

Query: 456 VRIQ-QRNGRKS--LTTVQGLK-KEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGD 289
           VRIQ Q +GRK   +  + G++  +    K+  +LKK+  C G V +      +I++QGD
Sbjct: 33  VRIQRQTSGRKGKGVCLITGIEMNDAELTKLAAELKKKCGCGGAVKEG-----IIEIQGD 87

Query: 288 QRKNVATFLVQAGIAKK 238
           +R  + + L   G+  K
Sbjct: 88  KRDLIKSLLEAKGMKVK 104

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>YCIH_SALTI (P0A2G8) Protein yciH|
          Length = 108

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
 Frame = -2

Query: 456 VRIQ-QRNGRKS--LTTVQGLK-KEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGD 289
           VRIQ Q +GRK   +  + G++  +    K+  +LKK+  C G V +      +I++QGD
Sbjct: 33  VRIQRQTSGRKGKGVCLITGIEMNDAELTKLAAELKKKCGCGGAVKEG-----IIEIQGD 87

Query: 288 QRKNVATFLVQAGIAKK 238
           +R  + + L   G+  K
Sbjct: 88  KRDLIKSLLEAKGMKVK 104

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>DENR_SCHPO (O42929) Density-regulated protein homolog|
          Length = 190

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
 Frame = -2

Query: 462 VHVRIQQRNGRKSLTTVQGLKK-EFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQ 286
           V ++  +R  RK +TTVQGL        K  K L  +F    +V +  +    I +QGD 
Sbjct: 99  VLIKTIERTKRKRVTTVQGLDAFGIETKKAAKMLANKFATGASVTKTADKKDEIVVQGDL 158

Query: 285 RKNVATFLVQ 256
             ++  F+++
Sbjct: 159 NYDIFDFILE 168

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>OR2J1_HUMAN (Q9GZK6) Olfactory receptor 2J1 (Olfactory receptor 6-5) (OR6-5)|
           (Hs6M1-4)
          Length = 312

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 20/43 (46%), Positives = 25/43 (58%), Gaps = 4/43 (9%)
 Frame = -1

Query: 133 LYILPLVWTVSCLMQVVLSPDYYAAV--PAHQ*VC--PRCCRL 17
           LY +  + T  C++ VV+S D YAAV  P H  V   PR CRL
Sbjct: 102 LYFVLALGTAECVLLVVMSYDRYAAVCRPLHYTVLMHPRFCRL 144

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>LYB_BACSU (P10773) B-enzyme (Lysozyme) (EC 3.2.1.17)|
          Length = 117

 Score = 30.0 bits (66), Expect = 6.2
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = -2

Query: 585 PVKPQQPSFMSDLDVTLPSAFDPFAEANAEDAGAGPGAKDY 463
           PV P   +  +D D+ LP      +  N +D G+GP   DY
Sbjct: 50  PVIPFGTTLKTDKDIWLPDGVGYKSSFNVDDTGSGPKKTDY 90

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>CYA1_DROME (P32870) Ca(2+)/calmodulin-responsive adenylate cyclase (EC 4.6.1.1)|
            (ATP pyrophosphate-lyase) (Protein rutabaga)
          Length = 2248

 Score = 30.0 bits (66), Expect = 6.2
 Identities = 17/52 (32%), Positives = 22/52 (42%)
 Frame = -1

Query: 241  EGAHQDPRLLSQGHRHHR*MLEPPASSSPILKT*GILYILPLVWTVSCLMQV 86
            EG    PR+++ GH HHR     PA             + PL W   C +QV
Sbjct: 1603 EGDEDSPRMVNGGHLHHRNGYHLPAGG----------LVNPLQWLYPCDIQV 1644

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>OSBP2_MOUSE (Q5QNQ6) Oxysterol-binding protein 2|
          Length = 908

 Score = 29.6 bits (65), Expect = 8.1
 Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
 Frame = -1

Query: 463 CACAHPAAQRQEESDYCSGPKERVQLQQDPQGSQEGI---LLQWHSSPGSRARPG 308
           C   H AA     S + SGP  + QLQ      +E +   + Q  S P SR+ PG
Sbjct: 29  CLSCHTAAPGMNSSAFGSGPASKPQLQPVQAPERELLSKQVCQPISEPASRSEPG 83

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>OR2J3_HUMAN (O76001) Olfactory receptor 2J3 (Olfactory receptor 6-6) (OR6-6)|
           (Hs6M1-3)
          Length = 311

 Score = 29.6 bits (65), Expect = 8.1
 Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 4/43 (9%)
 Frame = -1

Query: 133 LYILPLVWTVSCLMQVVLSPDYYAAV--PAHQ*VC--PRCCRL 17
           LY +  + T  C++ VV+S D YAAV  P H  V   PR C L
Sbjct: 104 LYFVLALGTTECVLLVVMSYDRYAAVCRPLHYTVLMHPRFCHL 146

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>YCIH_ECOLI (P08245) Protein yciH|
          Length = 108

 Score = 29.6 bits (65), Expect = 8.1
 Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
 Frame = -2

Query: 456 VRIQ-QRNGRKS--LTTVQGLK-KEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGD 289
           VRIQ Q +GRK   +  + G+   +    K+  +LKK+  C G V        VI++QGD
Sbjct: 33  VRIQRQTSGRKGKGVCLITGVDLDDAELTKLAAELKKKCGCGGAVKDG-----VIEIQGD 87

Query: 288 QRKNVATFLVQAGIAKK 238
           +R  + + L   G+  K
Sbjct: 88  KRDLLKSLLEAKGMKVK 104

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>SGP50_RAT (Q04807) Sulfated 50 kDa glycoprotein precursor (SGP50)|
           (Endothelial ligand FOR L-selectin)
           (Glycosylation-dependent cell adhesion molecule 1)
           (GlyCAM-1)
          Length = 146

 Score = 29.6 bits (65), Expect = 8.1
 Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
 Frame = -2

Query: 516 FAEANAEDAGAGPGAKDYVHVRIQQRNG--RKSLTTVQGLKKEFSYNKILKDLKKEFCCN 343
           FA   A    A PG+KD +H+R Q  +       T    + KE + +K L   K+ F  N
Sbjct: 9   FASLAATSLAAVPGSKDELHLRTQPTDAIPASQFTPSSHISKESTSSKDLS--KESFIFN 66

Query: 342 GTVVQDPELG 313
             +V +  +G
Sbjct: 67  EELVSEDNVG 76

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>PROP_MOUSE (P11680) Properdin precursor (Factor P)|
          Length = 464

 Score = 29.6 bits (65), Expect = 8.1
 Identities = 14/37 (37%), Positives = 17/37 (45%)
 Frame = -1

Query: 514 C*GKC*GCWCRPRRKRLCACAHPAAQRQEESDYCSGP 404
           C G C G    P+  R  +C+ PA   Q     CSGP
Sbjct: 201 CSGSCLGGAQEPKETRSRSCSAPAPSHQPPGKPCSGP 237

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>ARGR2_YEAST (P05085) Arginine metabolism regulation protein II|
          Length = 880

 Score = 29.6 bits (65), Expect = 8.1
 Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 5/48 (10%)
 Frame = -1

Query: 496 GCWCRPRRKRLCACAHPAAQRQEESDY-CSGPKERVQ----LQQDPQG 368
           GCW    RK  C   HP  QR E+S+  C G   +++    +Q DP G
Sbjct: 20  GCWTCRGRKVKCDLRHPHCQRCEKSNLPCGGYDIKLRWSKPMQFDPYG 67


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 82,762,615
Number of Sequences: 219361
Number of extensions: 1639746
Number of successful extensions: 4567
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 4389
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4561
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6143359464
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result