ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd22f16 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_479167.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1280 Score = 115 bits (58), Expect = 2e-22 Identities = 76/82 (92%) Strand = Plus / Minus Query: 541 gcctcatcttcctcaagctccttagcttcctctgggtccctgtagaagaacagatcaacc 600 ||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 757 gcctcttcttcctcttgctccttcgcttcctctgggtccctgtagaagaacagatcaacc 698 Query: 601 atgatttcccacttgtgtcctg 622 |||| |||||||||||||||| Sbjct: 697 atgacatcccacttgtgtcctg 676 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 379 tcccatccatcggctgcaggagctggagcaccagtccactcagccccagcc 429 |||||||| |||||||||||||||||||| ||||||| ||||| |||||| Sbjct: 925 tcccatcctccggctgcaggagctggagcagcagtccagtcagcaccagcc 875 Score = 40.1 bits (20), Expect = 8.5 Identities = 52/60 (86%), Gaps = 2/60 (3%) Strand = Plus / Minus Query: 118 acaaaaatcgatttccatctaacacaactcagtactgtaataaaaattaaatctacttaa 177 |||||| | ||||| ||||||| | ||||||||||||||| ||| |||||| |||||||| Sbjct: 1140 acaaaatttgatttgcatctaa-ataactcagtactgtaa-aaagattaaagctacttaa 1083
>ref|XM_507392.1| PREDICTED Oryza sativa (japonica cultivar-group), B1056G08.113 mRNA Length = 1298 Score = 115 bits (58), Expect = 2e-22 Identities = 76/82 (92%) Strand = Plus / Minus Query: 541 gcctcatcttcctcaagctccttagcttcctctgggtccctgtagaagaacagatcaacc 600 ||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 759 gcctcttcttcctcttgctccttcgcttcctctgggtccctgtagaagaacagatcaacc 700 Query: 601 atgatttcccacttgtgtcctg 622 |||| |||||||||||||||| Sbjct: 699 atgacatcccacttgtgtcctg 678 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 379 tcccatccatcggctgcaggagctggagcaccagtccactcagccccagcc 429 |||||||| |||||||||||||||||||| ||||||| ||||| |||||| Sbjct: 927 tcccatcctccggctgcaggagctggagcagcagtccagtcagcaccagcc 877 Score = 40.1 bits (20), Expect = 8.5 Identities = 52/60 (86%), Gaps = 2/60 (3%) Strand = Plus / Minus Query: 118 acaaaaatcgatttccatctaacacaactcagtactgtaataaaaattaaatctacttaa 177 |||||| | ||||| ||||||| | ||||||||||||||| ||| |||||| |||||||| Sbjct: 1142 acaaaatttgatttgcatctaa-ataactcagtactgtaa-aaagattaaagctacttaa 1085
>ref|XM_507391.1| PREDICTED Oryza sativa (japonica cultivar-group), B1056G08.113 mRNA Length = 1310 Score = 115 bits (58), Expect = 2e-22 Identities = 76/82 (92%) Strand = Plus / Minus Query: 541 gcctcatcttcctcaagctccttagcttcctctgggtccctgtagaagaacagatcaacc 600 ||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 760 gcctcttcttcctcttgctccttcgcttcctctgggtccctgtagaagaacagatcaacc 701 Query: 601 atgatttcccacttgtgtcctg 622 |||| |||||||||||||||| Sbjct: 700 atgacatcccacttgtgtcctg 679 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 379 tcccatccatcggctgcaggagctggagcaccagtccactcagccccagcc 429 |||||||| |||||||||||||||||||| ||||||| ||||| |||||| Sbjct: 928 tcccatcctccggctgcaggagctggagcagcagtccagtcagcaccagcc 878 Score = 40.1 bits (20), Expect = 8.5 Identities = 52/60 (86%), Gaps = 2/60 (3%) Strand = Plus / Minus Query: 118 acaaaaatcgatttccatctaacacaactcagtactgtaataaaaattaaatctacttaa 177 |||||| | ||||| ||||||| | ||||||||||||||| ||| |||||| |||||||| Sbjct: 1143 acaaaatttgatttgcatctaa-ataactcagtactgtaa-aaagattaaagctacttaa 1086
>ref|XM_506471.2| PREDICTED Oryza sativa (japonica cultivar-group), B1056G08.113 mRNA Length = 1343 Score = 115 bits (58), Expect = 2e-22 Identities = 76/82 (92%) Strand = Plus / Minus Query: 541 gcctcatcttcctcaagctccttagcttcctctgggtccctgtagaagaacagatcaacc 600 ||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 762 gcctcttcttcctcttgctccttcgcttcctctgggtccctgtagaagaacagatcaacc 703 Query: 601 atgatttcccacttgtgtcctg 622 |||| |||||||||||||||| Sbjct: 702 atgacatcccacttgtgtcctg 681 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 379 tcccatccatcggctgcaggagctggagcaccagtccactcagccccagcc 429 |||||||| |||||||||||||||||||| ||||||| ||||| |||||| Sbjct: 930 tcccatcctccggctgcaggagctggagcagcagtccagtcagcaccagcc 880 Score = 40.1 bits (20), Expect = 8.5 Identities = 52/60 (86%), Gaps = 2/60 (3%) Strand = Plus / Minus Query: 118 acaaaaatcgatttccatctaacacaactcagtactgtaataaaaattaaatctacttaa 177 |||||| | ||||| ||||||| | ||||||||||||||| ||| |||||| |||||||| Sbjct: 1145 acaaaatttgatttgcatctaa-ataactcagtactgtaa-aaagattaaagctacttaa 1088
>dbj|AK105968.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-E10, full insert sequence Length = 1298 Score = 115 bits (58), Expect = 2e-22 Identities = 76/82 (92%) Strand = Plus / Minus Query: 541 gcctcatcttcctcaagctccttagcttcctctgggtccctgtagaagaacagatcaacc 600 ||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 759 gcctcttcttcctcttgctccttcgcttcctctgggtccctgtagaagaacagatcaacc 700 Query: 601 atgatttcccacttgtgtcctg 622 |||| |||||||||||||||| Sbjct: 699 atgacatcccacttgtgtcctg 678 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 379 tcccatccatcggctgcaggagctggagcaccagtccactcagccccagcc 429 |||||||| |||||||||||||||||||| ||||||| ||||| |||||| Sbjct: 927 tcccatcctccggctgcaggagctggagcagcagtccagtcagcaccagcc 877 Score = 40.1 bits (20), Expect = 8.5 Identities = 52/60 (86%), Gaps = 2/60 (3%) Strand = Plus / Minus Query: 118 acaaaaatcgatttccatctaacacaactcagtactgtaataaaaattaaatctacttaa 177 |||||| | ||||| ||||||| | ||||||||||||||| ||| |||||| |||||||| Sbjct: 1142 acaaaatttgatttgcatctaa-ataactcagtactgtaa-aaagattaaagctacttaa 1085
>dbj|AK103952.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-F07, full insert sequence Length = 1280 Score = 115 bits (58), Expect = 2e-22 Identities = 76/82 (92%) Strand = Plus / Minus Query: 541 gcctcatcttcctcaagctccttagcttcctctgggtccctgtagaagaacagatcaacc 600 ||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 757 gcctcttcttcctcttgctccttcgcttcctctgggtccctgtagaagaacagatcaacc 698 Query: 601 atgatttcccacttgtgtcctg 622 |||| |||||||||||||||| Sbjct: 697 atgacatcccacttgtgtcctg 676 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 379 tcccatccatcggctgcaggagctggagcaccagtccactcagccccagcc 429 |||||||| |||||||||||||||||||| ||||||| ||||| |||||| Sbjct: 925 tcccatcctccggctgcaggagctggagcagcagtccagtcagcgccagcc 875 Score = 40.1 bits (20), Expect = 8.5 Identities = 52/60 (86%), Gaps = 2/60 (3%) Strand = Plus / Minus Query: 118 acaaaaatcgatttccatctaacacaactcagtactgtaataaaaattaaatctacttaa 177 |||||| | ||||| ||||||| | ||||||||||||||| ||| |||||| |||||||| Sbjct: 1140 acaaaatttgatttgcatctaa-ataactcagtactgtaa-aaagattaaagctacttaa 1083
>dbj|AK102735.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033106C12, full insert sequence Length = 1342 Score = 115 bits (58), Expect = 2e-22 Identities = 76/82 (92%) Strand = Plus / Minus Query: 541 gcctcatcttcctcaagctccttagcttcctctgggtccctgtagaagaacagatcaacc 600 ||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 761 gcctcttcttcctcttgctccttcgcttcctctgggtccctgtagaagaacagatcaacc 702 Query: 601 atgatttcccacttgtgtcctg 622 |||| |||||||||||||||| Sbjct: 701 atgacatcccacttgtgtcctg 680 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 379 tcccatccatcggctgcaggagctggagcaccagtccactcagccccagcc 429 |||||||| |||||||||||||||||||| ||||||| ||||| |||||| Sbjct: 929 tcccatcctccggctgcaggagctggagcagcagtccagtcagcaccagcc 879 Score = 40.1 bits (20), Expect = 8.5 Identities = 52/60 (86%), Gaps = 2/60 (3%) Strand = Plus / Minus Query: 118 acaaaaatcgatttccatctaacacaactcagtactgtaataaaaattaaatctacttaa 177 |||||| | ||||| ||||||| | ||||||||||||||| ||| |||||| |||||||| Sbjct: 1144 acaaaatttgatttgcatctaa-ataactcagtactgtaa-aaagattaaagctacttaa 1087
>dbj|AK058308.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-H07, full insert sequence Length = 1310 Score = 115 bits (58), Expect = 2e-22 Identities = 76/82 (92%) Strand = Plus / Minus Query: 541 gcctcatcttcctcaagctccttagcttcctctgggtccctgtagaagaacagatcaacc 600 ||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 760 gcctcttcttcctcttgctccttcgcttcctctgggtccctgtagaagaacagatcaacc 701 Query: 601 atgatttcccacttgtgtcctg 622 |||| |||||||||||||||| Sbjct: 700 atgacatcccacttgtgtcctg 679 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 379 tcccatccatcggctgcaggagctggagcaccagtccactcagccccagcc 429 |||||||| |||||||||||||||||||| ||||||| ||||| |||||| Sbjct: 928 tcccatcctccggctgcaggagctggagcagcagtccagtcagcaccagcc 878 Score = 40.1 bits (20), Expect = 8.5 Identities = 52/60 (86%), Gaps = 2/60 (3%) Strand = Plus / Minus Query: 118 acaaaaatcgatttccatctaacacaactcagtactgtaataaaaattaaatctacttaa 177 |||||| | ||||| ||||||| | ||||||||||||||| ||| |||||| |||||||| Sbjct: 1143 acaaaatttgatttgcatctaa-ataactcagtactgtaa-aaagattaaagctacttaa 1086
>gb|BT016512.1| Zea mays clone Contig345 mRNA sequence Length = 1208 Score = 113 bits (57), Expect = 7e-22 Identities = 111/129 (86%) Strand = Plus / Minus Query: 494 ctggggcagtgtactctgcaactgcagcgtactcaggggcacccaaagcctcatcttcct 553 |||| |||||||| |||||||| || | || ||||| ||| ||| |||||| ||||||| Sbjct: 750 ctggtgcagtgtattctgcaaccgcgccatagtcaggtgcaaccagagcctcttcttcct 691 Query: 554 caagctccttagcttcctctgggtccctgtagaagaacagatcaaccatgatttcccact 613 | |||| ||| |||||||||||||| ||||||||||| ||||| |||||||| ||||||| Sbjct: 690 ccagctgcttcgcttcctctgggtctctgtagaagaaaagatctaccatgatgtcccact 631 Query: 614 tgtgtcctg 622 ||||||||| Sbjct: 630 tgtgtcctg 622
>gb|BT017775.1| Zea mays clone EL01N0502H12.c mRNA sequence Length = 903 Score = 113 bits (57), Expect = 7e-22 Identities = 111/129 (86%) Strand = Plus / Minus Query: 494 ctggggcagtgtactctgcaactgcagcgtactcaggggcacccaaagcctcatcttcct 553 |||| |||||||| |||||||| || | || ||||| ||| ||| |||||| ||||||| Sbjct: 456 ctggtgcagtgtattctgcaaccgcgccatagtcaggtgcaaccagagcctcttcttcct 397 Query: 554 caagctccttagcttcctctgggtccctgtagaagaacagatcaaccatgatttcccact 613 | |||| ||| |||||||||||||| ||||||||||| ||||| |||||||| ||||||| Sbjct: 396 ccagctgcttcgcttcctctgggtctctgtagaagaaaagatctaccatgatgtcccact 337 Query: 614 tgtgtcctg 622 ||||||||| Sbjct: 336 tgtgtcctg 328
>gb|AY105034.1| Zea mays PCO130341 mRNA sequence Length = 1213 Score = 113 bits (57), Expect = 7e-22 Identities = 111/129 (86%) Strand = Plus / Minus Query: 494 ctggggcagtgtactctgcaactgcagcgtactcaggggcacccaaagcctcatcttcct 553 |||| |||||||| |||||||| || | || ||||| ||| ||| |||||| ||||||| Sbjct: 753 ctggtgcagtgtattctgcaaccgcgccatagtcaggtgcaaccagagcctcttcttcct 694 Query: 554 caagctccttagcttcctctgggtccctgtagaagaacagatcaaccatgatttcccact 613 | |||| ||| |||||||||||||| ||||||||||| ||||| |||||||| ||||||| Sbjct: 693 ccagctgcttcgcttcctctgggtctctgtagaagaaaagatctaccatgatgtcccact 634 Query: 614 tgtgtcctg 622 ||||||||| Sbjct: 633 tgtgtcctg 625
>gb|BT016521.1| Zea mays clone Contig354 mRNA sequence Length = 1275 Score = 97.6 bits (49), Expect = 4e-17 Identities = 58/61 (95%) Strand = Plus / Minus Query: 557 gctccttagcttcctctgggtccctgtagaagaacagatcaaccatgatttcccacttgt 616 ||||||| |||||||||||||| ||||||||||||||||||||||||| ||||||||||| Sbjct: 796 gctcctttgcttcctctgggtctctgtagaagaacagatcaaccatgacttcccacttgt 737 Query: 617 g 617 | Sbjct: 736 g 736
>gb|BT016624.1| Zea mays clone Contig457 mRNA sequence Length = 1418 Score = 89.7 bits (45), Expect = 1e-14 Identities = 57/61 (93%) Strand = Plus / Minus Query: 557 gctccttagcttcctctgggtccctgtagaagaacagatcaaccatgatttcccacttgt 616 ||||||| |||||||||||||| ||||||||||||||||| ||||||| ||||||||||| Sbjct: 748 gctcctttgcttcctctgggtctctgtagaagaacagatcgaccatgacttcccacttgt 689 Query: 617 g 617 | Sbjct: 688 g 688
>gb|AY103617.1| Zea mays PCO143386 mRNA sequence Length = 1516 Score = 89.7 bits (45), Expect = 1e-14 Identities = 57/61 (93%) Strand = Plus / Minus Query: 557 gctccttagcttcctctgggtccctgtagaagaacagatcaaccatgatttcccacttgt 616 ||||||| |||||||||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 835 gctcctttgcttcctctgggtctctgtagaagaacagatcaaccatgacctcccacttgt 776 Query: 617 g 617 | Sbjct: 775 g 775
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 87.7 bits (44), Expect = 4e-14 Identities = 56/60 (93%) Strand = Plus / Plus Query: 541 gcctcatcttcctcaagctccttagcttcctctgggtccctgtagaagaacagatcaacc 600 ||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 25360600 gcctcttcttcctcttgctccttcgcttcctctgggtccctgtagaagaacagatcaacc 25360659 Score = 40.1 bits (20), Expect = 8.5 Identities = 52/60 (86%), Gaps = 2/60 (3%) Strand = Plus / Plus Query: 118 acaaaaatcgatttccatctaacacaactcagtactgtaataaaaattaaatctacttaa 177 |||||| | ||||| ||||||| | ||||||||||||||| ||| |||||| |||||||| Sbjct: 25360050 acaaaatttgatttgcatctaa-ataactcagtactgtaa-aaagattaaagctacttaa 25360107
>dbj|AP004988.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1056G08 Length = 168173 Score = 87.7 bits (44), Expect = 4e-14 Identities = 56/60 (93%) Strand = Plus / Plus Query: 541 gcctcatcttcctcaagctccttagcttcctctgggtccctgtagaagaacagatcaacc 600 ||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 53690 gcctcttcttcctcttgctccttcgcttcctctgggtccctgtagaagaacagatcaacc 53749 Score = 40.1 bits (20), Expect = 8.5 Identities = 52/60 (86%), Gaps = 2/60 (3%) Strand = Plus / Plus Query: 118 acaaaaatcgatttccatctaacacaactcagtactgtaataaaaattaaatctacttaa 177 |||||| | ||||| ||||||| | ||||||||||||||| ||| |||||| |||||||| Sbjct: 53140 acaaaatttgatttgcatctaa-ataactcagtactgtaa-aaagattaaagctacttaa 53197
>gb|BT016485.1| Zea mays clone Contig318 mRNA sequence Length = 1267 Score = 81.8 bits (41), Expect = 2e-12 Identities = 56/61 (91%) Strand = Plus / Minus Query: 557 gctccttagcttcctctgggtccctgtagaagaacagatcaaccatgatttcccacttgt 616 ||||||| |||||||||||||||||||||||||||| ||| ||||||| |||||||||| Sbjct: 757 gctcctttgcttcctctgggtccctgtagaagaacaaatccaccatgacctcccacttgt 698 Query: 617 g 617 | Sbjct: 697 g 697
>dbj|AK109430.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-H04, full insert sequence Length = 1264 Score = 75.8 bits (38), Expect = 2e-10 Identities = 68/78 (87%) Strand = Plus / Minus Query: 540 agcctcatcttcctcaagctccttagcttcctctgggtccctgtagaagaacagatcaac 599 |||||| |||||||| ||||||||||||||||||| || || || ||||| |||||||| Sbjct: 759 agcctcctcttcctcctgctccttagcttcctctggatctctataaaagaaaagatcaac 700 Query: 600 catgatttcccacttgtg 617 ||||| ||||||||||| Sbjct: 699 catgacatcccacttgtg 682
>dbj|AK102347.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033091C12, full insert sequence Length = 1176 Score = 75.8 bits (38), Expect = 2e-10 Identities = 68/78 (87%) Strand = Plus / Minus Query: 540 agcctcatcttcctcaagctccttagcttcctctgggtccctgtagaagaacagatcaac 599 |||||| |||||||| ||||||||||||||||||| || || || ||||| |||||||| Sbjct: 762 agcctcctcttcctcctgctccttagcttcctctggatctctataaaagaaaagatcaac 703 Query: 600 catgatttcccacttgtg 617 ||||| ||||||||||| Sbjct: 702 catgacatcccacttgtg 685
>dbj|AK060322.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-F12, full insert sequence Length = 1245 Score = 75.8 bits (38), Expect = 2e-10 Identities = 68/78 (87%) Strand = Plus / Minus Query: 540 agcctcatcttcctcaagctccttagcttcctctgggtccctgtagaagaacagatcaac 599 |||||| |||||||| ||||||||||||||||||| || || || ||||| |||||||| Sbjct: 765 agcctcctcttcctcctgctccttagcttcctctggatctctataaaagaaaagatcaac 706 Query: 600 catgatttcccacttgtg 617 ||||| ||||||||||| Sbjct: 705 catgacatcccacttgtg 688
>gb|AF097522.1|AF097522 Brassica napus laminin receptor-like protein (LRP) mRNA, complete cds Length = 1138 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 568 tcctctgggtccctgtagaagaacagatcaaccatgatttcccactt 614 ||||| || |||||||||||||||||||||||||||| |||||||| Sbjct: 674 tcctcgggctccctgtagaagaacagatcaaccatgacatcccactt 628
>ref|XM_470555.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 918 Score = 58.0 bits (29), Expect = 4e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 557 gctccttagcttcctctgggtccctgtagaagaacagatcaaccatgatttcccacttgt 616 ||||||| || ||||| ||||| |||||||| |||||||||||||| | |||||||||| Sbjct: 649 gctccttggcctcctcagggtctctgtagaaaaacagatcaaccataacatcccacttgt 590 Query: 617 g 617 | Sbjct: 589 g 589
>dbj|AK104842.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-F12, full insert sequence Length = 1310 Score = 58.0 bits (29), Expect = 4e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 557 gctccttagcttcctctgggtccctgtagaagaacagatcaaccatgatttcccacttgt 616 ||||||| || ||||| ||||| |||||||| |||||||||||||| | |||||||||| Sbjct: 733 gctccttggcctcctcagggtctctgtagaaaaacagatcaaccataacatcccacttgt 674 Query: 617 g 617 | Sbjct: 673 g 673
>dbj|AK104620.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-F12, full insert sequence Length = 1276 Score = 58.0 bits (29), Expect = 4e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 557 gctccttagcttcctctgggtccctgtagaagaacagatcaaccatgatttcccacttgt 616 ||||||| || ||||| ||||| |||||||| |||||||||||||| | |||||||||| Sbjct: 733 gctccttggcctcctcagggtctctgtagaaaaacagatcaaccataacatcccacttgt 674 Query: 617 g 617 | Sbjct: 673 g 673
>dbj|AK104286.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-D06, full insert sequence Length = 1223 Score = 58.0 bits (29), Expect = 4e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 557 gctccttagcttcctctgggtccctgtagaagaacagatcaaccatgatttcccacttgt 616 ||||||| || ||||| ||||| |||||||| |||||||||||||| | |||||||||| Sbjct: 733 gctccttggcctcctcagggtctctgtagaaaaacagatcaaccataacatcccacttgt 674 Query: 617 g 617 | Sbjct: 673 g 673
>dbj|AK073397.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044H03, full insert sequence Length = 2030 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 379 tcccatccatcggctgcaggagctggagcaccagtccactcagcc 423 |||||||| |||||||||||||||||||| ||||||| |||||| Sbjct: 1648 tcccatcctccggctgcaggagctggagcagcagtccagtcagcc 1604 Score = 40.1 bits (20), Expect = 8.5 Identities = 52/60 (86%), Gaps = 2/60 (3%) Strand = Plus / Minus Query: 118 acaaaaatcgatttccatctaacacaactcagtactgtaataaaaattaaatctacttaa 177 |||||| | ||||| ||||||| | ||||||||||||||| ||| |||||| |||||||| Sbjct: 1863 acaaaatttgatttgcatctaa-ataactcagtactgtaa-aaagattaaagctacttaa 1806
>dbj|AK070905.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023065M10, full insert sequence Length = 1320 Score = 58.0 bits (29), Expect = 4e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 557 gctccttagcttcctctgggtccctgtagaagaacagatcaaccatgatttcccacttgt 616 ||||||| || ||||| ||||| |||||||| |||||||||||||| | |||||||||| Sbjct: 743 gctccttggcctcctcagggtctctgtagaaaaacagatcaaccataacatcccacttgt 684 Query: 617 g 617 | Sbjct: 683 g 683
>dbj|AK066899.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091K05, full insert sequence Length = 1182 Score = 58.0 bits (29), Expect = 4e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 557 gctccttagcttcctctgggtccctgtagaagaacagatcaaccatgatttcccacttgt 616 ||||||| || ||||| ||||| |||||||| |||||||||||||| | |||||||||| Sbjct: 681 gctccttggcctcctcagggtctctgtagaaaaacagatcaaccataacatcccacttgt 622 Query: 617 g 617 | Sbjct: 621 g 621
>dbj|AK061289.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-A03, full insert sequence Length = 1144 Score = 58.0 bits (29), Expect = 4e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 557 gctccttagcttcctctgggtccctgtagaagaacagatcaaccatgatttcccacttgt 616 ||||||| || ||||| ||||| |||||||| |||||||||||||| | |||||||||| Sbjct: 654 gctccttggcctcctcagggtctctgtagaaaaacagatcaaccataacatcccacttgt 595 Query: 617 g 617 | Sbjct: 594 g 594
>gb|AF020553.1|AF020553 Glycine max ribosome-associated protein p40 mRNA, complete cds Length = 1141 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 562 ttagcttcctctgggtccctgtagaagaacagatcaaccatga 604 ||||| |||||||| || || |||||||||||||||||||||| Sbjct: 710 ttagcctcctctggttctctatagaagaacagatcaaccatga 668
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 48.1 bits (24), Expect = 0.035 Identities = 39/44 (88%) Strand = Plus / Plus Query: 557 gctccttagcttcctctgggtccctgtagaagaacagatcaacc 600 ||||||| || ||||| ||||| |||||||| |||||||||||| Sbjct: 4319242 gctccttggcctcctcagggtctctgtagaaaaacagatcaacc 4319285
>gb|AC079633.9|AC079633 Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0032G08, from Chromosome 3, complete sequence Length = 122052 Score = 48.1 bits (24), Expect = 0.035 Identities = 39/44 (88%) Strand = Plus / Minus Query: 557 gctccttagcttcctctgggtccctgtagaagaacagatcaacc 600 ||||||| || ||||| ||||| |||||||| |||||||||||| Sbjct: 107255 gctccttggcctcctcagggtctctgtagaaaaacagatcaacc 107212
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 48.1 bits (24), Expect = 0.035 Identities = 39/44 (88%) Strand = Plus / Plus Query: 557 gctccttagcttcctctgggtccctgtagaagaacagatcaacc 600 ||||||| || ||||| ||||| |||||||| |||||||||||| Sbjct: 4319357 gctccttggcctcctcagggtctctgtagaaaaacagatcaacc 4319400
>dbj|AB012702.1| Daucus carota mRNA for P40-like protein, complete cds Length = 1111 Score = 48.1 bits (24), Expect = 0.035 Identities = 33/36 (91%) Strand = Plus / Minus Query: 586 aagaacagatcaaccatgatttcccacttgtgtcct 621 ||||||| ||||||||| | |||||||||||||||| Sbjct: 688 aagaacaaatcaaccatcacttcccacttgtgtcct 653
>gb|AY493286.1| Anas platyrhynchos microsatellite CAUD041 sequence Length = 384 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 309 tgctggtgctgctgcgggtgctg 331 ||||||||||||||||||||||| Sbjct: 349 tgctggtgctgctgcgggtgctg 327
>gb|AC111096.15| Mus musculus chromosome 3, clone RP23-174B18, complete sequence Length = 209936 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 439 acagcagcagctggagctgcagctcct 465 |||||||||||||||||||| |||||| Sbjct: 198112 acagcagcagctggagctgctgctcct 198086
>emb|BX817196.1|CNS0AD2L Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH91ZG07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1125 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 568 tcctctgggtccctgtagaagaacagatcaaccat 602 ||||| || |||||||| ||||||||||||||||| Sbjct: 709 tcctcaggttccctgtaaaagaacagatcaaccat 675
>gb|AE004744.1| Pseudomonas aeruginosa PAO1, section 305 of 529 of the complete genome Length = 14719 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 306 agctgctggtgctgctgcgggtgctgg 332 ||||||||||||||| ||||||||||| Sbjct: 10846 agctgctggtgctgccgcgggtgctgg 10872
>gb|AC112685.16| Mus musculus chromosome 3, clone RP23-340E10, complete sequence Length = 248750 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 439 acagcagcagctggagctgcagctcct 465 |||||||||||||||||||| |||||| Sbjct: 19941 acagcagcagctggagctgctgctcct 19915
>gb|AE010335.1| Methanopyrus kandleri AV19 section 34 of 157 of the complete genome Length = 12939 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 441 agcagcagctggagctgcagct 462 |||||||||||||||||||||| Sbjct: 430 agcagcagctggagctgcagct 409
>ref|XM_513110.1| PREDICTED: Pan troglodytes similar to medulloblastoma antigen MU-MB-2.42 (LOC456524), mRNA Length = 970 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 440 cagcagcagctggagctgcagc 461 |||||||||||||||||||||| Sbjct: 271 cagcagcagctggagctgcagc 292
>gb|AF143273.1| Vitis vinifera microsatellite ssrVvUCH25 sequence Length = 92 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 307 gctgctggtgctgctgcgggtgctgg 332 ||||||||||||||||| |||||||| Sbjct: 62 gctgctggtgctgctgctggtgctgg 87
>gb|DQ338462.1| Nephila antipodiana clone 145 minor ampullate fibroin 1 mRNA, partial cds Length = 1189 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 310 gctggtgctgctgcgggtgctggagc 335 |||||||||||||| ||||||||||| Sbjct: 522 gctggtgctgctgcaggtgctggagc 547
>gb|AC099174.7| Rattus norvegicus 4 BAC CH230-98I1 (Children's Hospital Oakland Research Institute) complete sequence Length = 197530 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 307 gctgctggtgctgctgcgggtgctgg 332 ||||||||||||||||| |||||||| Sbjct: 13405 gctgctggtgctgctgctggtgctgg 13430 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 307 gctgctggtgctgctgcgggtgctgg 332 ||||||||||||||||| |||||||| Sbjct: 13117 gctgctggtgctgctgctggtgctgg 13142 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 309 tgctggtgctgctgcgggtgctgg 332 ||||||||||||||| |||||||| Sbjct: 13044 tgctggtgctgctgctggtgctgg 13067
>gb|AC132580.2| Mus musculus BAC clone RP24-388H18 from chromosome 9, complete sequence Length = 127200 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 307 gctgctggtgctgctgcgggtgctgg 332 ||||||||||||||||| |||||||| Sbjct: 31619 gctgctggtgctgctgctggtgctgg 31594 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 307 gctgctggtgctgctgcgggtgctg 331 ||||||||||||||||| ||||||| Sbjct: 31988 gctgctggtgctgctgctggtgctg 31964 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 307 gctgctggtgctgctgcgggtgctg 331 ||||||||||||||||| ||||||| Sbjct: 31976 gctgctggtgctgctgctggtgctg 31952 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 307 gctgctggtgctgctgcgggtgctg 331 ||||||||||||||||| ||||||| Sbjct: 31964 gctgctggtgctgctgctggtgctg 31940 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 307 gctgctggtgctgctgcgggtgctg 331 ||||||||||||||||| ||||||| Sbjct: 31952 gctgctggtgctgctgctggtgctg 31928 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 307 gctgctggtgctgctgcgggtgctg 331 ||||||||||||||||| ||||||| Sbjct: 31775 gctgctggtgctgctgctggtgctg 31751 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 307 gctgctggtgctgctgcgggtgctg 331 ||||||||||||||||| ||||||| Sbjct: 31763 gctgctggtgctgctgctggtgctg 31739 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 307 gctgctggtgctgctgcgggtgctg 331 ||||||||||||||||| ||||||| Sbjct: 31751 gctgctggtgctgctgctggtgctg 31727 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 307 gctgctggtgctgctgcgggtgctg 331 ||||||||||||||||| ||||||| Sbjct: 31739 gctgctggtgctgctgctggtgctg 31715 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 307 gctgctggtgctgctgcgggtgctg 331 ||||||||||||||||| ||||||| Sbjct: 31685 gctgctggtgctgctgctggtgctg 31661 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 307 gctgctggtgctgctgcgggtgctg 331 ||||||||||||||||| ||||||| Sbjct: 31631 gctgctggtgctgctgctggtgctg 31607
>gb|BC060578.1| Rattus norvegicus ribosomal protein SA, mRNA (cDNA clone MGC:72885 IMAGE:6919235), complete cds Length = 1063 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Minus Query: 568 tcctctgggtccctgtagaagaacagatca 597 ||||||||||||||||||||| | |||||| Sbjct: 708 tcctctgggtccctgtagaagtaaagatca 679
>ref|NM_017138.1| Rattus norvegicus ribosomal protein SA (Rpsa), mRNA Length = 1018 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Minus Query: 568 tcctctgggtccctgtagaagaacagatca 597 ||||||||||||||||||||| | |||||| Sbjct: 691 tcctctgggtccctgtagaagtaaagatca 662
>gb|AF527734.1| Homo sapiens medulloblastoma antigen MU-MB-2.42 mRNA, partial cds Length = 1852 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 440 cagcagcagctggagctgcagc 461 |||||||||||||||||||||| Sbjct: 1134 cagcagcagctggagctgcagc 1155
>emb|AL049569.13|HSDJ37C10 Human DNA sequence from clone RP1-37C10 on chromosome 1p35.2-35.21 Contains the 3' end of the CROCC gene for ciliary rootlet coiled-coil rootletin (KIAA0445), the MFAP2 gene for microfibrillar-associated protein 2, a novel gene, the gene for a novel protein, the SDHB gene for succinate dehydrogenase complex subunit B iron sulfur (Ip), the PADI2 gene for type II peptidyl arginine deiminase, complete sequence Length = 216497 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 440 cagcagcagctggagctgcagc 461 |||||||||||||||||||||| Sbjct: 185962 cagcagcagctggagctgcagc 185941
>gb|AC166078.2| Mus musculus BAC clone RP23-13G1 from chromosome 9, complete sequence Length = 225128 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 307 gctgctggtgctgctgcgggtgctgg 332 ||||||||||||||||| |||||||| Sbjct: 149929 gctgctggtgctgctgctggtgctgg 149904 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 307 gctgctggtgctgctgcgggtgctg 331 ||||||||||||||||| ||||||| Sbjct: 150298 gctgctggtgctgctgctggtgctg 150274 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 307 gctgctggtgctgctgcgggtgctg 331 ||||||||||||||||| ||||||| Sbjct: 150286 gctgctggtgctgctgctggtgctg 150262 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 307 gctgctggtgctgctgcgggtgctg 331 ||||||||||||||||| ||||||| Sbjct: 150274 gctgctggtgctgctgctggtgctg 150250 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 307 gctgctggtgctgctgcgggtgctg 331 ||||||||||||||||| ||||||| Sbjct: 150262 gctgctggtgctgctgctggtgctg 150238 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 307 gctgctggtgctgctgcgggtgctg 331 ||||||||||||||||| ||||||| Sbjct: 150085 gctgctggtgctgctgctggtgctg 150061 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 307 gctgctggtgctgctgcgggtgctg 331 ||||||||||||||||| ||||||| Sbjct: 150073 gctgctggtgctgctgctggtgctg 150049 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 307 gctgctggtgctgctgcgggtgctg 331 ||||||||||||||||| ||||||| Sbjct: 150061 gctgctggtgctgctgctggtgctg 150037 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 307 gctgctggtgctgctgcgggtgctg 331 ||||||||||||||||| ||||||| Sbjct: 150049 gctgctggtgctgctgctggtgctg 150025 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 307 gctgctggtgctgctgcgggtgctg 331 ||||||||||||||||| ||||||| Sbjct: 149995 gctgctggtgctgctgctggtgctg 149971 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 307 gctgctggtgctgctgcgggtgctg 331 ||||||||||||||||| ||||||| Sbjct: 149941 gctgctggtgctgctgctggtgctg 149917
>emb|BX927149.1| Corynebacterium glutamicum ATCC 13032, IS fingerprint type 4-5, complete genome; segment 2/10 Length = 349887 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Plus Query: 419 cagccccagccggggcttcgacagcagcag 448 |||||||||| ||||||| ||||||||||| Sbjct: 204092 cagccccagctggggcttggacagcagcag 204121
>emb|CR599665.1| full-length cDNA clone CS0DF026YC09 of Fetal brain of Homo sapiens (human) Length = 1393 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 440 cagcagcagctggagctgcagc 461 |||||||||||||||||||||| Sbjct: 708 cagcagcagctggagctgcagc 729
>gb|AC011328.11| Homo sapiens chromosome 10 clone RP11-295O23, complete sequence Length = 216031 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 150 tactgtaataaaaattaaatct 171 |||||||||||||||||||||| Sbjct: 15536 tactgtaataaaaattaaatct 15515
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 307 gctgctggtgctgctgcgggtgctgg 332 ||||||||||||||||| |||||||| Sbjct: 1234823 gctgctggtgctgctgctggtgctgg 1234848
>tpg|BK005505.1| TPA: TPA_exp: Homo sapiens rootletin mRNA, complete cds Length = 6642 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 440 cagcagcagctggagctgcagc 461 |||||||||||||||||||||| Sbjct: 5914 cagcagcagctggagctgcagc 5935
>gb|DQ009621.1| Methanotorris igneus ribosomal protein L1 operon, complete sequence Length = 2320 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 440 cagcagcagctggagctgcagc 461 |||||||||||||||||||||| Sbjct: 2104 cagcagcagctggagctgcagc 2083
>dbj|BA000036.3| Corynebacterium glutamicum ATCC 13032 DNA, complete genome Length = 3309401 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Plus Query: 419 cagccccagccggggcttcgacagcagcag 448 |||||||||| ||||||| ||||||||||| Sbjct: 552114 cagccccagctggggcttggacagcagcag 552143
>gb|AC027653.3| Mus musculus strain C57BL6/J chromosome 5 clone RP23-166J14, complete sequence Length = 174990 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 307 gctgctggtgctgctgcgggtgctgg 332 ||||||||||||||||| |||||||| Sbjct: 106348 gctgctggtgctgctgctggtgctgg 106323
>ref|XM_576362.1| PREDICTED: Rattus norvegicus similar to 40S ribosomal protein SA (p40) (34/67 kDa laminin receptor) (LOC367030), mRNA Length = 993 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Minus Query: 568 tcctctgggtccctgtagaagaacagatca 597 ||||||||||||||||||||| | |||||| Sbjct: 692 tcctctgggtccctgtagaagtaaagatca 663
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 307 gctgctggtgctgctgcgggtgctgg 332 ||||||||||||||||||| |||||| Sbjct: 145434 gctgctggtgctgctgcggctgctgg 145459
>dbj|AB007914.2| Homo sapiens mRNA for KIAA0445 protein, partial cds Length = 6281 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 440 cagcagcagctggagctgcagc 461 |||||||||||||||||||||| Sbjct: 5553 cagcagcagctggagctgcagc 5574
>emb|AL590633.9| Mouse DNA sequence from clone RP23-211O23 on chromosome X, complete sequence Length = 179289 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 307 gctgctggtgctgctgcgggtgctgg 332 ||||||||||||||||| |||||||| Sbjct: 17898 gctgctggtgctgctgctggtgctgg 17923
>gb|AC005872.2|AC005872 Homo sapiens chromosome 10 clone CIT987SK-1137I1, complete sequence Length = 89672 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 150 tactgtaataaaaattaaatct 171 |||||||||||||||||||||| Sbjct: 27180 tactgtaataaaaattaaatct 27201
>gb|U04942.1|RNU04942 Rattus norvegicus laminin receptor mRNA, partial cds Length = 359 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Minus Query: 568 tcctctgggtccctgtagaagaacagatca 597 ||||||||||||||||||||| | |||||| Sbjct: 32 tcctctgggtccctgtagaagtaaagatca 3
>ref|NM_014675.2| Homo sapiens ciliary rootlet coiled-coil, rootletin (CROCC), mRNA Length = 6642 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 440 cagcagcagctggagctgcagc 461 |||||||||||||||||||||| Sbjct: 5914 cagcagcagctggagctgcagc 5935
>gb|DQ139275.1| Homo sapiens Tax1-binding protein 2 mRNA, complete cds, alternatively spliced Length = 5920 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 440 cagcagcagctggagctgcagc 461 |||||||||||||||||||||| Sbjct: 5271 cagcagcagctggagctgcagc 5292
>gb|U32943.1|SAU32943 Schistocerca americana Antennapedia homeotic protein (Antp) mRNA, complete cds Length = 3068 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 307 gctgctggtgctgctgcgggtgctgg 332 ||||||| |||||||||||||||||| Sbjct: 915 gctgctgctgctgctgcgggtgctgg 890
>dbj|D25224.1|RAT40RP Rat mRNA for 40kDa ribosomal protein, complete cds Length = 1018 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Minus Query: 568 tcctctgggtccctgtagaagaacagatca 597 ||||||||||||||||||||| | |||||| Sbjct: 691 tcctctgggtccctgtagaagtaaagatca 662
>ref|NM_031025.1| Rattus norvegicus dihydrolipoamide S-acetyltransferase (E2 component of pyruvate dehydrogenase complex) (Dlat), mRNA Length = 2628 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 442 gcagcagctggagctgcagct 462 ||||||||||||||||||||| Sbjct: 585 gcagcagctggagctgcagct 565
>ref|XM_957304.1| Neurospora crassa OR74A hypothetical protein (NCU06363.1) partial mRNA Length = 1818 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 307 gctgctggtgctgctgcgggtgctg 331 ||||||||||||||||| ||||||| Sbjct: 1420 gctgctggtgctgctgctggtgctg 1396
>ref|XM_326217.1| Neurospora crassa OR74A hypothetical protein (NCU06363.1) partial mRNA Length = 1818 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 307 gctgctggtgctgctgcgggtgctg 331 ||||||||||||||||| ||||||| Sbjct: 1420 gctgctggtgctgctgctggtgctg 1396
>gb|AC125016.20| Mus musculus chromosome 7, clone RP24-157A17, complete sequence Length = 176607 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 307 gctgctggtgctgctgcgggtgctggagc 335 |||| |||||||||||| ||||||||||| Sbjct: 87519 gctggtggtgctgctgctggtgctggagc 87547
>gb|AC153600.8| Mus musculus 6 BAC RP23-380C10 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 194848 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 156 aataaaaattaaatctactta 176 ||||||||||||||||||||| Sbjct: 104683 aataaaaattaaatctactta 104703
>ref|XM_542234.2| PREDICTED: Canis familiaris similar to mastermind-like 2 (LOC485116), mRNA Length = 3872 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 307 gctgctggtgctgctgcgggtgctg 331 ||||||||||||||||| ||||||| Sbjct: 1399 gctgctggtgctgctgctggtgctg 1375 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 307 gctgctggtgctgctgcgggtgctg 331 ||||||||||||||||| ||||||| Sbjct: 1387 gctgctggtgctgctgctggtgctg 1363 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 307 gctgctggtgctgctgcgggtgctg 331 ||||||||||||||||| ||||||| Sbjct: 1375 gctgctggtgctgctgctggtgctg 1351
>gb|AY371488.1| Zea mays clone BAC 276N12-123C01, partial sequence Length = 213888 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 541 gcctcatcttcctcaagctcc 561 ||||||||||||||||||||| Sbjct: 94829 gcctcatcttcctcaagctcc 94809
>emb|CR956634.3| Pig DNA sequence from clone CH242-277I8 on chromosome 17, complete sequence Length = 206278 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 450 tggagctgcagctcctggcca 470 ||||||||||||||||||||| Sbjct: 23548 tggagctgcagctcctggcca 23528
>emb|AL450472.14| Human DNA sequence from clone RP11-265D19 on chromosome X Contains the 5' end of the ZNF75 gene for zinc finger protein 75 (D8C6), gene FLJ23614, two novel genes, the 5' end of a novel gene, a novel pseudogene and four CpG islands, complete sequence Length = 177877 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 440 cagcagcagctggagctgcag 460 ||||||||||||||||||||| Sbjct: 97954 cagcagcagctggagctgcag 97974
>emb|AL353148.8| Human DNA sequence from clone RP11-298H24 on chromosome 10 Contains a novel gene, complete sequence Length = 181308 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 357 aggtgcaggtgcaggaactgc 377 ||||||||||||||||||||| Sbjct: 96150 aggtgcaggtgcaggaactgc 96170
>gb|AC158769.2| Mus musculus chromosome 15, clone RP23-128J3, complete sequence Length = 199472 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 109 ccacggaagacaaaaatcgat 129 ||||||||||||||||||||| Sbjct: 98446 ccacggaagacaaaaatcgat 98466
>emb|AL939110.1|SCO939110 Streptomyces coelicolor A3(2) complete genome; segment 7/29 Length = 283100 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 316 gctgctgcgggtgctggagcg 336 ||||||||||||||||||||| Sbjct: 172906 gctgctgcgggtgctggagcg 172926
>gb|AY119244.1| Drosophila melanogaster SD20094 full insert cDNA Length = 3407 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 440 cagcagcagctggagctgcag 460 ||||||||||||||||||||| Sbjct: 2032 cagcagcagctggagctgcag 2052
>emb|BX629340.6| Zebrafish DNA sequence from clone DKEY-183O11 in linkage group 9, complete sequence Length = 172090 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 388 tcggctgcaggagctggagca 408 ||||||||||||||||||||| Sbjct: 83804 tcggctgcaggagctggagca 83824
>ref|NM_176549.1| Drosophila melanogaster six-banded CG13598-RB, transcript variant B (sba), mRNA Length = 5656 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 441 agcagcagctggagctgcagc 461 ||||||||||||||||||||| Sbjct: 4728 agcagcagctggagctgcagc 4748
>ref|NM_176541.1| Drosophila melanogaster CG31158-RB, transcript variant B (CG31158), mRNA Length = 5613 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 440 cagcagcagctggagctgcag 460 ||||||||||||||||||||| Sbjct: 4258 cagcagcagctggagctgcag 4278
>ref|NM_170094.2| Drosophila melanogaster six-banded CG13598-RA, transcript variant A (sba), mRNA Length = 6158 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 441 agcagcagctggagctgcagc 461 ||||||||||||||||||||| Sbjct: 5230 agcagcagctggagctgcagc 5250
>ref|NM_170027.2| Drosophila melanogaster CG31158-RA, transcript variant A (CG31158), mRNA Length = 5211 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 440 cagcagcagctggagctgcag 460 ||||||||||||||||||||| Sbjct: 3856 cagcagcagctggagctgcag 3876
>gb|AC093858.2| Homo sapiens BAC clone RP11-535C7 from 4, complete sequence Length = 151113 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 565 gcttcctctgggtccctgtag 585 ||||||||||||||||||||| Sbjct: 103520 gcttcctctgggtccctgtag 103540
>gb|AY058767.1| Drosophila melanogaster SD04244 full length cDNA Length = 5720 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 441 agcagcagctggagctgcagc 461 ||||||||||||||||||||| Sbjct: 4756 agcagcagctggagctgcagc 4776
>gb|AY283928.2| Bacteriophage KVP40, complete genome Length = 244834 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 303 agtagctgctggtgctgctgc 323 ||||||||||||||||||||| Sbjct: 172232 agtagctgctggtgctgctgc 172212
>gb|AC007929.8|AC007929 Drosophila melanogaster, chromosome 3R, region 95A-95C, BAC clone BACR05C11, complete sequence Length = 171376 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 441 agcagcagctggagctgcagc 461 ||||||||||||||||||||| Sbjct: 60529 agcagcagctggagctgcagc 60509
>gb|AC008197.3|AC008197 Drosophila melanogaster, chromosome 3R, region 94B-94C, BAC clone BACR02L12, complete sequence Length = 178931 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 440 cagcagcagctggagctgcag 460 ||||||||||||||||||||| Sbjct: 50829 cagcagcagctggagctgcag 50849
>gb|AC155328.5| Mus musculus 6 BAC RP24-75K10 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 216930 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 156 aataaaaattaaatctactta 176 ||||||||||||||||||||| Sbjct: 187621 aataaaaattaaatctactta 187641
>gb|AC153940.3| Mus musculus 10 BAC RP24-422N15 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 142278 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 307 gctgctggtgctgctgcgggtgctg 331 ||||||||||||||||| ||||||| Sbjct: 2616 gctgctggtgctgctgctggtgctg 2592
>gb|AC155710.5| Mus musculus 10 BAC RP24-141K13 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 183533 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 307 gctgctggtgctgctgcgggtgctg 331 ||||||||||||||||| ||||||| Sbjct: 103487 gctgctggtgctgctgctggtgctg 103463
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 307 gctgctggtgctgctgcgggtgctg 331 ||||| ||||||||||||||||||| Sbjct: 5563013 gctgcgggtgctgctgcgggtgctg 5562989
>ref|XM_226333.3| PREDICTED: Rattus norvegicus adenylate cyclase 7 (Adcy7), mRNA Length = 4101 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 446 cagctggagctgcagctcctggcca 470 ||||||| ||||||||||||||||| Sbjct: 1144 cagctggggctgcagctcctggcca 1168
>gb|AE016754.1| Mus musculus chromosome 10 high-growth region, section 2 of 2 of the complete sequence Length = 303688 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 307 gctgctggtgctgctgcgggtgctg 331 ||||||||||||||||| ||||||| Sbjct: 68588 gctgctggtgctgctgctggtgctg 68612
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 307 gctgctggtgctgctgcgggtgctg 331 |||||||||||||||||| |||||| Sbjct: 2950116 gctgctggtgctgctgcgcgtgctg 2950140
>dbj|AK109998.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-159-F02, full insert sequence Length = 2767 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 307 gctgctggtgctgctgcgggtgctg 331 ||||||||||||||||| ||||||| Sbjct: 1637 gctgctggtgctgctgctggtgctg 1613 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 307 gctgctggtgctgctgcgggtgctg 331 ||||||||||||||||| ||||||| Sbjct: 1625 gctgctggtgctgctgctggtgctg 1601
>dbj|AK109017.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-154-A08, full insert sequence Length = 1708 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 307 gctgctggtgctgctgcgggtgctg 331 |||||||| |||||||||||||||| Sbjct: 480 gctgctggggctgctgcgggtgctg 456
>emb|BX248383.5| Mouse DNA sequence from clone RP23-63C4 on chromosome 2, complete sequence Length = 15851 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 159 aaaaattaaatctacttaagc 179 ||||||||||||||||||||| Sbjct: 6335 aaaaattaaatctacttaagc 6315
>gb|AE003745.4| Drosophila melanogaster chromosome 3R, section 83 of 118 of the complete sequence Length = 230236 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 441 agcagcagctggagctgcagc 461 ||||||||||||||||||||| Sbjct: 93421 agcagcagctggagctgcagc 93401
>gb|AE003739.3| Drosophila melanogaster chromosome 3R, section 77 of 118 of the complete sequence Length = 224856 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 440 cagcagcagctggagctgcag 460 ||||||||||||||||||||| Sbjct: 184339 cagcagcagctggagctgcag 184359
>gb|AC123606.11| Mus musculus chromosome 15, clone RP24-528D12, complete sequence Length = 175623 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 109 ccacggaagacaaaaatcgat 129 ||||||||||||||||||||| Sbjct: 129402 ccacggaagacaaaaatcgat 129422
>emb|BX323826.6| Zebrafish DNA sequence from clone CH211-57H10 in linkage group 5, complete sequence Length = 119262 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 388 tcggctgcaggagctggagca 408 ||||||||||||||||||||| Sbjct: 71013 tcggctgcaggagctggagca 71033
>gb|AC161466.4| Gallus gallus BAC clone CH261-104N11 from chromosome ul, complete sequence Length = 189905 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 367 gcaggaactgcatcccatcca 387 ||||||||||||||||||||| Sbjct: 91358 gcaggaactgcatcccatcca 91378
>gb|BC107440.1| Rattus norvegicus dihydrolipoamide S-acetyltransferase (E2 component of pyruvate dehydrogenase complex), mRNA (cDNA clone MGC:125038 IMAGE:7115402), complete cds Length = 2628 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 442 gcagcagctggagctgcagct 462 ||||||||||||||||||||| Sbjct: 585 gcagcagctggagctgcagct 565
>gb|U93048.1|DCU93048 Daucus carota somatic embryogenesis receptor-like kinase mRNA, complete cds Length = 1755 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 301 ggagtagctgctggtgctgct 321 ||||||||||||||||||||| Sbjct: 550 ggagtagctgctggtgctgct 570
>gb|U49159.1|MXU49159 Myxococcus xanthus putative sigma-54 dependent transcriptional activator (264_Mxa) gene, partial cds Length = 408 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 317 ctgctgcgggtgctggagcgc 337 ||||||||||||||||||||| Sbjct: 118 ctgctgcgggtgctggagcgc 138
>emb|AL732564.12| Mouse DNA sequence from clone RP23-442G9 on chromosome 2, complete sequence Length = 211657 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 307 gctgctggtgctgctgcgggtgctg 331 ||||||||||||||||| ||||||| Sbjct: 206941 gctgctggtgctgctgctggtgctg 206917
>emb|X98235.1|DMTF125 D.melanogaster mRNA for TF125 protein Length = 6061 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 441 agcagcagctggagctgcagc 461 ||||||||||||||||||||| Sbjct: 5123 agcagcagctggagctgcagc 5143
>gb|M16075.1|RATPBCAA Rat primary biliary cirrhosis mitochondrial autoantigen mRNA Length = 1370 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 442 gcagcagctggagctgcagct 462 ||||||||||||||||||||| Sbjct: 89 gcagcagctggagctgcagct 69
>gb|M61192.1|MZEWXBA Z.mays spontaneous deletion sequence from waxy (wx-B) gene Length = 187 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 307 gctgctggtgctgctgcgggtgctg 331 ||||||||||||||||| ||||||| Sbjct: 46 gctgctggtgctgctgctggtgctg 22
>dbj|D10655.1|RATPDCE2 Rattus norvegicus mRNA for dihydrolipoamide acetyltransferase Length = 2266 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 442 gcagcagctggagctgcagct 462 ||||||||||||||||||||| Sbjct: 302 gcagcagctggagctgcagct 282
>dbj|D00092.1|RATMTAA Rattus norvegicus mRNA for 70 kd mitochondrial autoantigen, partial cds Length = 1370 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 442 gcagcagctggagctgcagct 462 ||||||||||||||||||||| Sbjct: 89 gcagcagctggagctgcagct 69
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 318 tgctgcgggtgctggagcgc 337 |||||||||||||||||||| Sbjct: 4021755 tgctgcgggtgctggagcgc 4021736
>ref|NM_111349.2| Arabidopsis thaliana RPSAB; structural constituent of ribosome AT3G04770 (RPSAB) transcript variant AT3G04770.2 mRNA, complete cds Length = 1124 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 577 tccctgtagaagaacagatcaaccatga 604 ||||||||||| |||||||| ||||||| Sbjct: 663 tccctgtagaaaaacagatccaccatga 636
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 313 ggtgctgctgcgggtgctggagcg 336 ||||||||||||||||||| |||| Sbjct: 2078728 ggtgctgctgcgggtgctgcagcg 2078705
>ref|XM_512919.1| PREDICTED: Pan troglodytes similar to U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2 (LOC456313), mRNA Length = 4173 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 446 cagctggagctgcagctcct 465 |||||||||||||||||||| Sbjct: 3285 cagctggagctgcagctcct 3266
>gb|AC154650.2| Mus musculus BAC clone RP23-162K2 from chromosome 17, complete sequence Length = 210417 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 309 tgctggtgctgctgcgggtgctgg 332 ||||||||||||||| |||||||| Sbjct: 190772 tgctggtgctgctgctggtgctgg 190749
>ref|XM_467514.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2907 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 304 gtagctgctggtgctgctgc 323 |||||||||||||||||||| Sbjct: 870 gtagctgctggtgctgctgc 889
>ref|NM_013333.2| Homo sapiens epsin 1 (EPN1), mRNA Length = 2430 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 446 cagctggagctgcagctcct 465 |||||||||||||||||||| Sbjct: 881 cagctggagctgcagctcct 862
>ref|NM_176973.3| Mus musculus podocalyxin-like 2 (Podxl2), mRNA Length = 2094 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 307 gctgctggtgctgctgcgggtgct 330 ||||||||||||||||| |||||| Sbjct: 618 gctgctggtgctgctgctggtgct 595
>gb|BC082972.1| Homo sapiens cytoskeleton-associated protein 4, mRNA (cDNA clone MGC:99554 IMAGE:6084968), complete cds Length = 2231 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 308 ctgctggtgctgctgcgggtgctg 331 |||| ||||||||||||||||||| Sbjct: 237 ctgcgggtgctgctgcgggtgctg 214
>gb|AY394086.1| Crocuta crocuta clone TA66.2 androgen receptor gene, exon 1 and partial cds; and microsatellite sequence Length = 616 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 309 tgctggtgctgctgcgggtgctgg 332 ||||||||||||||| |||||||| Sbjct: 77 tgctggtgctgctgctggtgctgg 54
>gb|AY394085.1| Crocuta crocuta clone TA66.1 androgen receptor gene, exon 1 and partial cds; and microsatellite sequence Length = 616 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 309 tgctggtgctgctgcgggtgctgg 332 ||||||||||||||| |||||||| Sbjct: 77 tgctggtgctgctgctggtgctgg 54
>gb|AC103597.21| Mus musculus chromosome 18, clone RP23-435G4, complete sequence Length = 221083 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 307 gctgctggtgctgctgcgggtgct 330 ||||||||||||||||| |||||| Sbjct: 56991 gctgctggtgctgctgctggtgct 56968
>gb|BC033384.1| Mus musculus podocalyxin-like 2, mRNA (cDNA clone MGC:38924 IMAGE:5362581), complete cds Length = 2094 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 307 gctgctggtgctgctgcgggtgct 330 ||||||||||||||||| |||||| Sbjct: 618 gctgctggtgctgctgctggtgct 595
>gb|AC137124.17| Mus musculus chromosome 3, clone RP24-229P11, complete sequence Length = 172081 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 309 tgctggtgctgctgcgggtgctgg 332 ||||||||||| |||||||||||| Sbjct: 123497 tgctggtgctgatgcgggtgctgg 123520
>gb|AC116075.5| Rattus norvegicus 6 BAC CH230-139H23 (Children's Hospital Oakland Research Institute) complete sequence Length = 153441 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 453 agctgcagctcctggccattcagc 476 ||||||| |||||||||||||||| Sbjct: 56458 agctgcatctcctggccattcagc 56481
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 gctgctggtgctgctgcggg 326 |||||||||||||||||||| Sbjct: 405598 gctgctggtgctgctgcggg 405617
>ref|XM_610371.2| PREDICTED: Bos taurus similar to Glioma tumor suppressor candidate region gene 1 protein (LOC531868), mRNA Length = 2159 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 307 gctgctggtgctgctgcgggtgctggag 334 ||||||| ||||||||||| |||||||| Sbjct: 1938 gctgctgttgctgctgcggctgctggag 1911
>gb|BC044651.1| Homo sapiens epsin 1, mRNA (cDNA clone MGC:40313 IMAGE:5244118), complete cds Length = 2413 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 446 cagctggagctgcagctcct 465 |||||||||||||||||||| Sbjct: 862 cagctggagctgcagctcct 843
>ref|NM_015025.2| Homo sapiens myelin transcription factor 1-like (MYT1L), mRNA Length = 7152 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 gtagctgctggtgctgctgc 323 |||||||||||||||||||| Sbjct: 2906 gtagctgctggtgctgctgc 2887
>gb|AY809251.1| Schistosoma japonicum SJCHGC04935 protein mRNA, partial cds Length = 822 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 aataaagctattcgatgaga 66 |||||||||||||||||||| Sbjct: 441 aataaagctattcgatgaga 422
>ref|NM_006825.2| Homo sapiens cytoskeleton-associated protein 4 (CKAP4), mRNA Length = 2913 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 308 ctgctggtgctgctgcgggtgctg 331 |||| ||||||||||||||||||| Sbjct: 264 ctgcgggtgctgctgcgggtgctg 241
>gb|BC067357.1| Homo sapiens cytoskeleton-associated protein 4, mRNA (cDNA clone IMAGE:6082888), partial cds Length = 2168 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 308 ctgctggtgctgctgcgggtgctg 331 |||| ||||||||||||||||||| Sbjct: 248 ctgcgggtgctgctgcgggtgctg 225
>gb|AC163021.5| Mus musculus chromosome 15, clone RP23-228E13, complete sequence Length = 215165 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 aacacagccttccacccatg 227 |||||||||||||||||||| Sbjct: 50743 aacacagccttccacccatg 50724
>gb|AC113110.17| Mus musculus chromosome 16, clone RP23-328A9, complete sequence Length = 240173 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 146 tcagtactgtaataaaaatt 165 |||||||||||||||||||| Sbjct: 95812 tcagtactgtaataaaaatt 95793
>ref|XM_993394.1| PREDICTED: Mus musculus hypothetical protein LOC672428 (LOC672428), mRNA Length = 666 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 gcagcagctggagctgcagc 461 |||||||||||||||||||| Sbjct: 177 gcagcagctggagctgcagc 158
>gb|AC126031.2| Mus musculus BAC clone RP24-84F17 from chromosome 19, complete sequence Length = 217220 Score = 40.1 bits (20), Expect = 8.5 Identities = 35/40 (87%) Strand = Plus / Minus Query: 558 ctccttagcttcctctgggtccctgtagaagaacagatca 597 ||||| || |||||||||||| ||||||||| | |||||| Sbjct: 16834 ctcctcagtttcctctgggtctctgtagaagtaaagatca 16795
>gb|AC127264.4| Mus musculus BAC clone RP24-336J13 from chromosome 19, complete sequence Length = 169256 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 390 ggctgcaggagctggagcac 409 |||||||||||||||||||| Sbjct: 82545 ggctgcaggagctggagcac 82564
>gb|AC135963.3| Mus musculus BAC clone RP23-346N11 from chromosome 7, complete sequence Length = 202404 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 gcagcagctggagctgcagc 461 |||||||||||||||||||| Sbjct: 1898 gcagcagctggagctgcagc 1879
>gb|AY128705.1| Crocuta crocuta androgen receptor mRNA, complete cds Length = 2739 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 309 tgctggtgctgctgcgggtgctgg 332 ||||||||||||||| |||||||| Sbjct: 197 tgctggtgctgctgctggtgctgg 174
>gb|AC126695.4| Mus musculus BAC clone RP23-313D2 from 18, complete sequence Length = 171427 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 307 gctgctggtgctgctgcgggtgct 330 ||||||||||||||||| |||||| Sbjct: 42985 gctgctggtgctgctgctggtgct 43008
>ref|XM_862835.1| PREDICTED: Canis familiaris similar to NAD(P) transhydrogenase, mitochondrial precursor (Pyridine nucleotide transhydrogenase) (Nicotinamide nucleotide transhydrogenase), transcript variant 5 (LOC479342), mRNA Length = 4562 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 592 agatcaaccatgatttccca 611 |||||||||||||||||||| Sbjct: 3027 agatcaaccatgatttccca 3046
>ref|XM_862829.1| PREDICTED: Canis familiaris similar to NAD(P) transhydrogenase, mitochondrial precursor (Pyridine nucleotide transhydrogenase) (Nicotinamide nucleotide transhydrogenase), transcript variant 4 (LOC479342), mRNA Length = 4589 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 592 agatcaaccatgatttccca 611 |||||||||||||||||||| Sbjct: 3054 agatcaaccatgatttccca 3073
>ref|XM_862823.1| PREDICTED: Canis familiaris similar to NAD(P) transhydrogenase, mitochondrial precursor (Pyridine nucleotide transhydrogenase) (Nicotinamide nucleotide transhydrogenase), transcript variant 3 (LOC479342), mRNA Length = 3806 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 592 agatcaaccatgatttccca 611 |||||||||||||||||||| Sbjct: 2271 agatcaaccatgatttccca 2290
>ref|XM_862815.1| PREDICTED: Canis familiaris similar to NAD(P) transhydrogenase, mitochondrial precursor (Pyridine nucleotide transhydrogenase) (Nicotinamide nucleotide transhydrogenase), transcript variant 2 (LOC479342), mRNA Length = 3464 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 592 agatcaaccatgatttccca 611 |||||||||||||||||||| Sbjct: 1929 agatcaaccatgatttccca 1948
>ref|XM_536481.2| PREDICTED: Canis familiaris similar to NAD(P) transhydrogenase, mitochondrial precursor (Pyridine nucleotide transhydrogenase) (Nicotinamide nucleotide transhydrogenase), transcript variant 1 (LOC479342), mRNA Length = 4559 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 592 agatcaaccatgatttccca 611 |||||||||||||||||||| Sbjct: 3024 agatcaaccatgatttccca 3043
>gb|AC133899.9| Mus musculus chromosome 15, clone RP24-511H11, complete sequence Length = 185808 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 aacacagccttccacccatg 227 |||||||||||||||||||| Sbjct: 126804 aacacagccttccacccatg 126823
>gb|AC107232.4| Mus musculus chromosome 15, clone RP23-144B2, complete sequence Length = 204292 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 aacacagccttccacccatg 227 |||||||||||||||||||| Sbjct: 134927 aacacagccttccacccatg 134908
>emb|AL591625.8| Human DNA sequence from clone RP13-202B6 on chromosome Xp21.1-21.3 Contains the gene for a novel protein and a ferritin heavy polypeptide-like 17 (FTHL17) pseudogene, complete sequence Length = 142672 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 553 tcaagctccttagcttcctctggg 576 |||||||||| ||||||||||||| Sbjct: 76289 tcaagctcctcagcttcctctggg 76266
>ref|XM_505376.1| Yarrowia lipolytica CLIB122, YALI0F13497g predicted mRNA Length = 1188 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 309 tgctggtgctgctgcgggtgctgg 332 ||||||||||| |||||||||||| Sbjct: 89 tgctggtgctggtgcgggtgctgg 66
>emb|AL160404.7| Human DNA sequence from clone RP1-318G22 on chromosome 6, complete sequence Length = 27503 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 203 caaataacacagccttccacccatgaac 230 ||||||||||||||||||| ||||||| Sbjct: 23910 caaataacacagccttccattcatgaac 23937
>emb|AL132772.14|HS1013A22 Human DNA sequence from clone RP5-1013A22 on chromosome 20 Contains the HNF4A gene for hepatocyte nuclear factor 4, a novel gene, the C20orf62 gene for chromosome 20 open reading frame 62, the RPL37AP1 gene for ribosomal protein L37a pseudogene 1 and the 5' end of the C20orf121 gene for chromosome 20 open reading frame 121, complete sequence Length = 83798 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 458 cagctcctggccattcagca 477 |||||||||||||||||||| Sbjct: 4529 cagctcctggccattcagca 4510
>emb|X64539.1|GGCBPAMR G.domesticus mRNA for carboxipeptidase A Length = 1339 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 391 gctgcaggagctggagcacc 410 |||||||||||||||||||| Sbjct: 142 gctgcaggagctggagcacc 161
>gb|BC037578.1| Homo sapiens, clone IMAGE:5555983, mRNA Length = 480 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 308 ctgctggtgctgctgcgggtgctg 331 |||| ||||||||||||||||||| Sbjct: 307 ctgcgggtgctgctgcgggtgctg 284
>emb|BX248361.1| Corynebacterium diphtheriae gravis NCTC13129, complete genome; segment 8/8 Length = 53793 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 ctgctggtgctgctgcgggt 327 |||||||||||||||||||| Sbjct: 5465 ctgctggtgctgctgcgggt 5484
>ref|NM_204584.1| Gallus gallus carboxypeptidase A1 (pancreatic) (CPA1), mRNA Length = 1339 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 391 gctgcaggagctggagcacc 410 |||||||||||||||||||| Sbjct: 142 gctgcaggagctggagcacc 161
>gb|AC079174.20| Homo sapiens 12 BAC RP11-651L5 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 87817 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 308 ctgctggtgctgctgcgggtgctg 331 |||| ||||||||||||||||||| Sbjct: 68545 ctgcgggtgctgctgcgggtgctg 68522
>gb|BC031690.1| Homo sapiens, clone IMAGE:4214679, mRNA Length = 2451 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 gtagctgctggtgctgctgc 323 |||||||||||||||||||| Sbjct: 1695 gtagctgctggtgctgctgc 1676
>dbj|AB029029.2| Homo sapiens mRNA for KIAA1106 protein, partial cds Length = 6953 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 gtagctgctggtgctgctgc 323 |||||||||||||||||||| Sbjct: 2731 gtagctgctggtgctgctgc 2712
>emb|AL954137.18| Zebrafish DNA sequence from clone CH211-222L21 in linkage group 11, complete sequence Length = 222163 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 196 ctgacggcaaataacacagccttc 219 ||||||||||| |||||||||||| Sbjct: 24599 ctgacggcaaagaacacagccttc 24576
>gb|AC113387.2| Homo sapiens chromosome 5 clone RP11-351A8, complete sequence Length = 153428 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 438 gacagcagcagctggagctg 457 |||||||||||||||||||| Sbjct: 38254 gacagcagcagctggagctg 38235
>gb|AC091211.3| Drosophila melanogaster 3L BAC RP98-26E12 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 194589 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 308 ctgctggtgctgctgcgggtgctg 331 |||||||||||||||||| ||||| Sbjct: 173369 ctgctggtgctgctgcggttgctg 173392
>gb|AC091228.3| Drosophila melanogaster 3L BAC RP98-10L9 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 156142 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 308 ctgctggtgctgctgcgggtgctg 331 |||||||||||||||||| ||||| Sbjct: 71016 ctgctggtgctgctgcggttgctg 70993
>gb|AC023745.3| Drosophila melanogaster X BAC RP98-26N1 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 179312 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 309 tgctggtgctgctgcgggtgctgg 332 ||||||||||||||| |||||||| Sbjct: 92432 tgctggtgctgctgctggtgctgg 92409
>gb|AC128639.13| Papio anubis clone rp41-2d18, complete sequence Length = 173331 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 439 acagcagcagctggagctgcagct 462 ||||||||||||| |||||||||| Sbjct: 40595 acagcagcagctgcagctgcagct 40618
>dbj|AK022454.1| Homo sapiens cDNA FLJ12392 fis, clone MAMMA1002699, highly similar to Rattus norvegicus EH domain binding protein Epsin mRNA Length = 2452 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 446 cagctggagctgcagctcct 465 |||||||||||||||||||| Sbjct: 881 cagctggagctgcagctcct 862
>ref|NM_206286.1| Drosophila melanogaster CG10107-RC, transcript variant C (CG10107), mRNA Length = 5867 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 308 ctgctggtgctgctgcgggtgctg 331 |||||||||||||||||| ||||| Sbjct: 923 ctgctggtgctgctgcggttgctg 900
>ref|NM_139799.3| Drosophila melanogaster CG10107-RA, transcript variant A (CG10107), mRNA Length = 5852 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 308 ctgctggtgctgctgcgggtgctg 331 |||||||||||||||||| ||||| Sbjct: 908 ctgctggtgctgctgcggttgctg 885
>ref|NM_136485.2| Drosophila melanogaster CG30377-RA (CG30377), mRNA Length = 3144 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 300 cggagtagctgctggtgctgctgc 323 |||||||||| ||||||||||||| Sbjct: 280 cggagtagctcctggtgctgctgc 257
>gb|AC087506.7| Homo sapiens chromosome 18, clone RP11-726O24, complete sequence Length = 169753 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 553 tcaagctccttagcttcctctggg 576 ||||||||| |||||||||||||| Sbjct: 45282 tcaagctccctagcttcctctggg 45259
>gb|AC068457.5| Homo sapiens chromosome 11, clone RP11-582N4, complete sequence Length = 172516 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 ggcaaaatggaactccaaat 49 |||||||||||||||||||| Sbjct: 123445 ggcaaaatggaactccaaat 123426
>gb|AC011416.3| Homo sapiens chromosome 5 clone CTB-88F18, complete sequence Length = 142357 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 taaaaattaaatctacttaa 177 |||||||||||||||||||| Sbjct: 133465 taaaaattaaatctacttaa 133484
>gb|AC034235.5| Homo sapiens chromosome 5 clone CTD-2262B2, complete sequence Length = 103950 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 438 gacagcagcagctggagctg 457 |||||||||||||||||||| Sbjct: 13644 gacagcagcagctggagctg 13663
>gb|AC022174.6| Homo sapiens chromosome 18, clone RP11-489I20, complete sequence Length = 162881 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 553 tcaagctccttagcttcctctggg 576 ||||||||| |||||||||||||| Sbjct: 43374 tcaagctccctagcttcctctggg 43351
>dbj|AK051761.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length enriched library, clone:D130074J02 product:similar to ENDOGLYCAN [Homo sapiens], full insert sequence Length = 2196 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 307 gctgctggtgctgctgcgggtgct 330 ||||||||||||||||| |||||| Sbjct: 821 gctgctggtgctgctgctggtgct 798
>gb|AY550956.1| Sparus aurata 40S ribosomal protein Sa-like protein mRNA, complete cds Length = 1039 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 574 gggtccctgtagaagaacagatca 597 ||||||||||||||| |||||||| Sbjct: 698 gggtccctgtagaagtacagatca 675
>dbj|AK005905.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:1700012G11 product:unclassifiable, full insert sequence Length = 511 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 70 ggcataaggctggggtgagaactc 93 ||||| |||||||||||||||||| Sbjct: 24 ggcatcaggctggggtgagaactc 1
>gb|AC153923.4| Mus musculus 6 BAC RP23-82I13 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 248275 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 307 gctgctggtgctgctgcgggtgct 330 ||||||||||||||||| |||||| Sbjct: 176000 gctgctggtgctgctgctggtgct 176023
>ref|XM_624778.1| PREDICTED: Apis mellifera hypothetical protein LOC406120 (LOC406120), mRNA Length = 564 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 307 gctgctggtgctgctgcgggtgct 330 ||||||||||||||||| |||||| Sbjct: 371 gctgctggtgctgctgctggtgct 348
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 gtagctgctggtgctgctgc 323 |||||||||||||||||||| Sbjct: 29921270 gtagctgctggtgctgctgc 29921251
>gb|AC007084.7|AC007084 Drosophila melanogaster, chromosome 2R, region 43F-44A, BAC clone BACR26A16, complete sequence Length = 139410 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 300 cggagtagctgctggtgctgctgc 323 |||||||||| ||||||||||||| Sbjct: 79405 cggagtagctcctggtgctgctgc 79428
>gb|AC064834.5| Homo sapiens BAC clone RP11-666B15 from 2, complete sequence Length = 169529 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 456 tgcagctcctggccattcag 475 |||||||||||||||||||| Sbjct: 157388 tgcagctcctggccattcag 157369
>gb|AC093390.4| Homo sapiens BAC clone RP11-755H23 from 2, complete sequence Length = 94150 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 304 gtagctgctggtgctgctgc 323 |||||||||||||||||||| Sbjct: 91727 gtagctgctggtgctgctgc 91746
>gb|AF073727.1|AF073727 Homo sapiens EH domain-binding mitotic phosphoprotein (EPSIN) mRNA, complete cds Length = 2620 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 446 cagctggagctgcagctcct 465 |||||||||||||||||||| Sbjct: 1449 cagctggagctgcagctcct 1430
>gb|AF225512.1|AF225512 Solanum tuberosum soluble NSF attachment protein mRNA, complete cds Length = 1057 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 544 tcatcttcctcaagctcctt 563 |||||||||||||||||||| Sbjct: 903 tcatcttcctcaagctcctt 884
>gb|AY087423.1| Arabidopsis thaliana clone 35242 mRNA, complete sequence Length = 1027 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 577 tccctgtagaagaacagatcaaccatga 604 ||||||||||| |||||||| ||||||| Sbjct: 665 tccctgtagaaaaacagatccaccatga 638
>gb|AC022469.5|AC022469 Homo sapiens chromosome 14 clone RP11-588P7 map 14q31, complete sequence Length = 159891 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 taaaaattaaatctacttaa 177 |||||||||||||||||||| Sbjct: 115612 taaaaattaaatctacttaa 115631
>gb|AC034099.16| Mus Musculus Strain C57BL6/J Chromosome 7 BAC, RP23-145I16, complete sequence Length = 229553 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 gcagcagctggagctgcagc 461 |||||||||||||||||||| Sbjct: 155828 gcagcagctggagctgcagc 155809
>gb|AC135377.3| Mus musculus BAC clone RP24-66B2 from chromosome 19, complete sequence Length = 179745 Score = 40.1 bits (20), Expect = 8.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 558 ctccttagcttcctctgggtccctgtagaagaacagatca 597 ||||| || |||||||||||| ||||||||| | |||||| Sbjct: 25895 ctcctcagtttcctctgggtctctgtagaagtaaagatca 25934
>dbj|AP005052.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0654B04 Length = 156907 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 gtagctgctggtgctgctgc 323 |||||||||||||||||||| Sbjct: 21546 gtagctgctggtgctgctgc 21527
>dbj|AP004040.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1008_D06 Length = 112768 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 gtagctgctggtgctgctgc 323 |||||||||||||||||||| Sbjct: 78235 gtagctgctggtgctgctgc 78216
>emb|AJ243806.1|CRE243806 Chlamydomonas reinhardtii dhc1 gene for 1-alpha dynein heavy chain Length = 23204 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 312 tggtgctgctgcgggtgctggagcgctg 339 |||||||||||| || |||||||||||| Sbjct: 21184 tggtgctgctgcaggagctggagcgctg 21211
>ref|XM_317473.2| Anopheles gambiae str. PEST ENSANGP00000012393 (ENSANGG00000009904), partial mRNA Length = 569 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 308 ctgctggtgctgctgcgggtgctg 331 |||||||||||||||| ||||||| Sbjct: 87 ctgctggtgctgctgctggtgctg 64
>dbj|AK101764.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033064D18, full insert sequence Length = 2907 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 304 gtagctgctggtgctgctgc 323 |||||||||||||||||||| Sbjct: 870 gtagctgctggtgctgctgc 889
>emb|AJ323999.1|HSA323999 Homo sapiens genomic sequence surrounding NotI site, clone NL1-UN17C Length = 636 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 449 ctggagctgcagctcctggc 468 |||||||||||||||||||| Sbjct: 75 ctggagctgcagctcctggc 94
>gb|AF036943.1|AF036943 Homo sapiens myelin transcription factor 1-like (MYT1-l) mRNA, complete cds Length = 4662 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 gtagctgctggtgctgctgc 323 |||||||||||||||||||| Sbjct: 2847 gtagctgctggtgctgctgc 2828
>gb|AE003839.4| Drosophila melanogaster chromosome 2R, section 11 of 73 of the complete sequence Length = 254177 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 300 cggagtagctgctggtgctgctgc 323 |||||||||| ||||||||||||| Sbjct: 112783 cggagtagctcctggtgctgctgc 112760
>gb|AE003561.3| Drosophila melanogaster chromosome 3L, section 24 of 83 of the complete sequence Length = 274289 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 308 ctgctggtgctgctgcgggtgctg 331 |||||||||||||||||| ||||| Sbjct: 100957 ctgctggtgctgctgcggttgctg 100980
>gb|AE003484.3| Drosophila melanogaster chromosome X, section 36 of 74 of the complete sequence Length = 314111 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 309 tgctggtgctgctgcgggtgctgg 332 ||||||||||||||| |||||||| Sbjct: 147483 tgctggtgctgctgctggtgctgg 147460
>gb|AY898810.1| Chlamydomonas incerta homoserine dehydrogenase (HSD) gene, partial cds; and inositol monophosphatase (IMP) and GSP1 (GSP1) genes, complete cds Length = 10638 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 309 tgctggtgctgctgcgggtgctgg 332 ||||||||||| |||||||||||| Sbjct: 6956 tgctggtgctggtgcgggtgctgg 6933
>gb|AC092480.27| Mus musculus strain C57BL/6J chromosome 17 clone rp23-387f2, complete sequence Length = 213144 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 309 tgctggtgctgctgcgggtgctgg 332 ||||||||||||||| |||||||| Sbjct: 202650 tgctggtgctgctgctggtgctgg 202627
>gb|AC005915.1|AC005915 Homo sapiens chromosome 5, Bac clone 58g14 (LBNL H76), complete sequence Length = 151026 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 158 taaaaattaaatctacttaa 177 |||||||||||||||||||| Sbjct: 104523 taaaaattaaatctacttaa 104504
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 316 gctgctgcgggtgctggagc 335 |||||||||||||||||||| Sbjct: 3378625 gctgctgcgggtgctggagc 3378606
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 431 gggcttcgacagcagcagct 450 |||||||||||||||||||| Sbjct: 1508125 gggcttcgacagcagcagct 1508144
>gb|AC168063.3| Mus musculus BAC clone RP23-197G3 from chromosome 17, complete sequence Length = 213263 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 309 tgctggtgctgctgcgggtgctgg 332 ||||||||||||||| |||||||| Sbjct: 208487 tgctggtgctgctgctggtgctgg 208510
>gb|AC150681.2| Mus musculus BAC clone RP24-490A22 from 7, complete sequence Length = 195652 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 229 accatgggctaactccttcacccc 252 ||||||||||| |||||||||||| Sbjct: 120604 accatgggctatctccttcacccc 120581
>gb|U66223.1|ATU66223 Arabidopsis thaliana p40 protein homolog mRNA, complete cds Length = 1105 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 577 tccctgtagaagaacagatcaaccatga 604 ||||||||||| |||||||| ||||||| Sbjct: 644 tccctgtagaaaaacagatccaccatga 617
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 309 tgctggtgctgctgcgggtgctgg 332 ||||||||||| |||||||||||| Sbjct: 1807388 tgctggtgctggtgcgggtgctgg 1807365
>gb|L49392.1|MSGILVB Mycobacterium avium acetolactate synthase (ilvBN) and acetohydroxy acid isomeroreductase (ilvC) gene, complete cds Length = 4210 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 316 gctgctgcgggtgctggagc 335 |||||||||||||||||||| Sbjct: 2518 gctgctgcgggtgctggagc 2537
>emb|AL954301.5| Mouse DNA sequence from clone RP23-350P7 on chromosome 4, complete sequence Length = 18636 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 acacttgcaggcaaaatgga 40 |||||||||||||||||||| Sbjct: 4419 acacttgcaggcaaaatgga 4438
>emb|AL731864.25| Mouse DNA sequence from clone RP23-342F20 on chromosome 7, complete sequence Length = 148047 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 gcagcagctggagctgcagc 461 |||||||||||||||||||| Sbjct: 75472 gcagcagctggagctgcagc 75491
>emb|AL133024.1|HSM801385 Homo sapiens mRNA; cDNA DKFZp434E0922 (from clone DKFZp434E0922) Length = 1890 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 gtagctgctggtgctgctgc 323 |||||||||||||||||||| Sbjct: 1007 gtagctgctggtgctgctgc 988
>emb|AL807252.5| Mouse DNA sequence from clone RP23-456B18 on chromosome 4, complete sequence Length = 195718 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 cttccacccatgaaccatgg 235 |||||||||||||||||||| Sbjct: 36077 cttccacccatgaaccatgg 36058
>emb|X69910.2|HSP63 Homo sapiens p63 mRNA for transmembrane protein Length = 2913 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 308 ctgctggtgctgctgcgggtgctg 331 |||| ||||||||||||||||||| Sbjct: 264 ctgcgggtgctgctgcgggtgctg 241
>gb|AC010525.6| Homo sapiens chromosome 19 clone LLNLR-297C12, complete sequence Length = 36806 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 446 cagctggagctgcagctcct 465 |||||||||||||||||||| Sbjct: 18243 cagctggagctgcagctcct 18224
>emb|AL603826.18| Mouse DNA sequence from clone RP23-206P11 on chromosome 11, complete sequence Length = 145299 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 tactgtaataaaaattaaat 169 |||||||||||||||||||| Sbjct: 20122 tactgtaataaaaattaaat 20103 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,479,659 Number of Sequences: 3902068 Number of extensions: 6479659 Number of successful extensions: 166751 Number of sequences better than 10.0: 220 Number of HSP's better than 10.0 without gapping: 220 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 165359 Number of HSP's gapped (non-prelim): 1392 length of query: 622 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 599 effective length of database: 17,143,297,704 effective search space: 10268835324696 effective search space used: 10268835324696 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
