Clone Name | rbasd22f14 |
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Clone Library Name | barley_pub |
>ref|XM_479670.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2127 Score = 167 bits (84), Expect = 5e-38 Identities = 132/148 (89%) Strand = Plus / Minus Query: 187 attcacacgccagcttggtgtcaaagctggtcaagcagatggcgaacgcctggaacgccg 246 ||||||| |||||||||||||| ||||||||||| ||||||||||| |||||||| || | Sbjct: 1843 attcacaagccagcttggtgtcgaagctggtcaaacagatggcgaaagcctggaatgctg 1784 Query: 247 agagcgggtaccgatagtccatggtgaacatgtccttggtaaccttaccgaactgcagga 306 |||| |||||||| |||||||||||||||||||||||| ||||||||| |||||||||| Sbjct: 1783 agagagggtaccggtagtccatggtgaacatgtccttgccaaccttaccaaactgcagga 1724 Query: 307 tcaccttctcgtgatcggacgtcgaaga 334 ||||||| | |||||||| | |||||| Sbjct: 1723 tcaccttgccatgatcggatgccgaaga 1696 Score = 103 bits (52), Expect = 6e-19 Identities = 106/124 (85%) Strand = Plus / Minus Query: 433 tcagctggaagttcttcacggaggccaccgtcacccggcctcggaagttgaggcaccagc 492 |||||||||| ||||| || || ||||| || |||||||| ||||||||||||||||| | Sbjct: 1618 tcagctggaaattcttgacagaagccacagttacccggccacggaagttgaggcaccaac 1559 Query: 493 actgcagctgttcgtgccatctcggcaccttgttgcggaggaccaagggcctctccttgg 552 | |||||||| || |||||||| ||||| ||||| || || ||||| ||||||||||| | Sbjct: 1558 attgcagctgctcatgccatcttggcactttgtttcgtagaaccaaaggcctctccttag 1499 Query: 553 cctc 556 |||| Sbjct: 1498 cctc 1495
>ref|XM_506618.1| PREDICTED Oryza sativa (japonica cultivar-group), P0015C07.29 mRNA Length = 3119 Score = 167 bits (84), Expect = 5e-38 Identities = 132/148 (89%) Strand = Plus / Minus Query: 187 attcacacgccagcttggtgtcaaagctggtcaagcagatggcgaacgcctggaacgccg 246 ||||||| |||||||||||||| ||||||||||| ||||||||||| |||||||| || | Sbjct: 1844 attcacaagccagcttggtgtcgaagctggtcaaacagatggcgaaagcctggaatgctg 1785 Query: 247 agagcgggtaccgatagtccatggtgaacatgtccttggtaaccttaccgaactgcagga 306 |||| |||||||| |||||||||||||||||||||||| ||||||||| |||||||||| Sbjct: 1784 agagagggtaccggtagtccatggtgaacatgtccttgccaaccttaccaaactgcagga 1725 Query: 307 tcaccttctcgtgatcggacgtcgaaga 334 ||||||| | |||||||| | |||||| Sbjct: 1724 tcaccttgccatgatcggatgccgaaga 1697 Score = 103 bits (52), Expect = 6e-19 Identities = 106/124 (85%) Strand = Plus / Minus Query: 433 tcagctggaagttcttcacggaggccaccgtcacccggcctcggaagttgaggcaccagc 492 |||||||||| ||||| || || ||||| || |||||||| ||||||||||||||||| | Sbjct: 1619 tcagctggaaattcttgacagaagccacagttacccggccacggaagttgaggcaccaac 1560 Query: 493 actgcagctgttcgtgccatctcggcaccttgttgcggaggaccaagggcctctccttgg 552 | |||||||| || |||||||| ||||| ||||| || || ||||| ||||||||||| | Sbjct: 1559 attgcagctgctcatgccatcttggcactttgtttcgtagaaccaaaggcctctccttag 1500 Query: 553 cctc 556 |||| Sbjct: 1499 cctc 1496
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 167 bits (84), Expect = 5e-38 Identities = 132/148 (89%) Strand = Plus / Minus Query: 187 attcacacgccagcttggtgtcaaagctggtcaagcagatggcgaacgcctggaacgccg 246 ||||||| |||||||||||||| ||||||||||| ||||||||||| |||||||| || | Sbjct: 184160 attcacaagccagcttggtgtcgaagctggtcaaacagatggcgaaagcctggaatgctg 184101 Query: 247 agagcgggtaccgatagtccatggtgaacatgtccttggtaaccttaccgaactgcagga 306 |||| |||||||| |||||||||||||||||||||||| ||||||||| |||||||||| Sbjct: 184100 agagagggtaccggtagtccatggtgaacatgtccttgccaaccttaccaaactgcagga 184041 Query: 307 tcaccttctcgtgatcggacgtcgaaga 334 ||||||| | |||||||| | |||||| Sbjct: 184040 tcaccttgccatgatcggatgccgaaga 184013 Score = 103 bits (52), Expect = 6e-19 Identities = 106/124 (85%) Strand = Plus / Minus Query: 433 tcagctggaagttcttcacggaggccaccgtcacccggcctcggaagttgaggcaccagc 492 |||||||||| ||||| || || ||||| || |||||||| ||||||||||||||||| | Sbjct: 183935 tcagctggaaattcttgacagaagccacagttacccggccacggaagttgaggcaccaac 183876 Query: 493 actgcagctgttcgtgccatctcggcaccttgttgcggaggaccaagggcctctccttgg 552 | |||||||| || |||||||| ||||| ||||| || || ||||| ||||||||||| | Sbjct: 183875 attgcagctgctcatgccatcttggcactttgtttcgtagaaccaaaggcctctccttag 183816 Query: 553 cctc 556 |||| Sbjct: 183815 cctc 183812 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 313 tctcgtgatcggacgtcgaagacgatga 340 ||||||||||||| || ||||||||||| Sbjct: 23898943 tctcgtgatcggaggttgaagacgatga 23898970
>dbj|AP004654.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0015C07 Length = 149079 Score = 167 bits (84), Expect = 5e-38 Identities = 132/148 (89%) Strand = Plus / Minus Query: 187 attcacacgccagcttggtgtcaaagctggtcaagcagatggcgaacgcctggaacgccg 246 ||||||| |||||||||||||| ||||||||||| ||||||||||| |||||||| || | Sbjct: 99495 attcacaagccagcttggtgtcgaagctggtcaaacagatggcgaaagcctggaatgctg 99436 Query: 247 agagcgggtaccgatagtccatggtgaacatgtccttggtaaccttaccgaactgcagga 306 |||| |||||||| |||||||||||||||||||||||| ||||||||| |||||||||| Sbjct: 99435 agagagggtaccggtagtccatggtgaacatgtccttgccaaccttaccaaactgcagga 99376 Query: 307 tcaccttctcgtgatcggacgtcgaaga 334 ||||||| | |||||||| | |||||| Sbjct: 99375 tcaccttgccatgatcggatgccgaaga 99348 Score = 103 bits (52), Expect = 6e-19 Identities = 106/124 (85%) Strand = Plus / Minus Query: 433 tcagctggaagttcttcacggaggccaccgtcacccggcctcggaagttgaggcaccagc 492 |||||||||| ||||| || || ||||| || |||||||| ||||||||||||||||| | Sbjct: 99270 tcagctggaaattcttgacagaagccacagttacccggccacggaagttgaggcaccaac 99211 Query: 493 actgcagctgttcgtgccatctcggcaccttgttgcggaggaccaagggcctctccttgg 552 | |||||||| || |||||||| ||||| ||||| || || ||||| ||||||||||| | Sbjct: 99210 attgcagctgctcatgccatcttggcactttgtttcgtagaaccaaaggcctctccttag 99151 Query: 553 cctc 556 |||| Sbjct: 99150 cctc 99147
>dbj|AK104486.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-A09, full insert sequence Length = 1233 Score = 167 bits (84), Expect = 5e-38 Identities = 132/148 (89%) Strand = Plus / Minus Query: 187 attcacacgccagcttggtgtcaaagctggtcaagcagatggcgaacgcctggaacgccg 246 ||||||| |||||||||||||| ||||||||||| ||||||||||| |||||||| || | Sbjct: 970 attcacaagccagcttggtgtcgaagctggtcaaacagatggcgaaagcctggaatgctg 911 Query: 247 agagcgggtaccgatagtccatggtgaacatgtccttggtaaccttaccgaactgcagga 306 |||| |||||||| |||||||||||||||||||||||| ||||||||| |||||||||| Sbjct: 910 agagagggtaccggtagtccatggtgaacatgtccttgccaaccttaccaaactgcagga 851 Query: 307 tcaccttctcgtgatcggacgtcgaaga 334 ||||||| | |||||||| | |||||| Sbjct: 850 tcaccttgccatgatcggatgccgaaga 823 Score = 103 bits (52), Expect = 6e-19 Identities = 106/124 (85%) Strand = Plus / Minus Query: 433 tcagctggaagttcttcacggaggccaccgtcacccggcctcggaagttgaggcaccagc 492 |||||||||| ||||| || || ||||| || |||||||| ||||||||||||||||| | Sbjct: 745 tcagctggaaattcttgacagaagccacagttacccggccacggaagttgaggcaccaac 686 Query: 493 actgcagctgttcgtgccatctcggcaccttgttgcggaggaccaagggcctctccttgg 552 | |||||||| || |||||||| ||||| ||||| || || ||||| ||||||||||| | Sbjct: 685 attgcagctgctcatgccatcttggcactttgtttcgtagaaccaaaggcctctccttag 626 Query: 553 cctc 556 |||| Sbjct: 625 cctc 622
>dbj|AK100078.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001J17, full insert sequence Length = 2129 Score = 167 bits (84), Expect = 5e-38 Identities = 132/148 (89%) Strand = Plus / Minus Query: 187 attcacacgccagcttggtgtcaaagctggtcaagcagatggcgaacgcctggaacgccg 246 ||||||| |||||||||||||| ||||||||||| ||||||||||| |||||||| || | Sbjct: 1845 attcacaagccagcttggtgtcgaagctggtcaaacagatggcgaaagcctggaatgctg 1786 Query: 247 agagcgggtaccgatagtccatggtgaacatgtccttggtaaccttaccgaactgcagga 306 |||| |||||||| |||||||||||||||||||||||| ||||||||| |||||||||| Sbjct: 1785 agagagggtaccggtagtccatggtgaacatgtccttgccaaccttaccaaactgcagga 1726 Query: 307 tcaccttctcgtgatcggacgtcgaaga 334 ||||||| | |||||||| | |||||| Sbjct: 1725 tcaccttgccatgatcggatgccgaaga 1698 Score = 103 bits (52), Expect = 6e-19 Identities = 106/124 (85%) Strand = Plus / Minus Query: 433 tcagctggaagttcttcacggaggccaccgtcacccggcctcggaagttgaggcaccagc 492 |||||||||| ||||| || || ||||| || |||||||| ||||||||||||||||| | Sbjct: 1617 tcagctggaaattcttgacagaagccacagttacccggccacggaagttgaggcaccaac 1558 Query: 493 actgcagctgttcgtgccatctcggcaccttgttgcggaggaccaagggcctctccttgg 552 | |||||||| || |||||||| ||||| ||||| || || ||||| ||||||||||| | Sbjct: 1557 attgcagctgctcatgccatcttggcactttgtttcgtagaaccaaaggcctctccttag 1498 Query: 553 cctc 556 |||| Sbjct: 1497 cctc 1494
>dbj|AK060879.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-A08, full insert sequence Length = 1233 Score = 167 bits (84), Expect = 5e-38 Identities = 132/148 (89%) Strand = Plus / Minus Query: 187 attcacacgccagcttggtgtcaaagctggtcaagcagatggcgaacgcctggaacgccg 246 ||||||| |||||||||||||| ||||||||||| ||||||||||| |||||||| || | Sbjct: 970 attcacaagccagcttggtgtcgaagctggtcaaacagatggcgaaagcctggaatgctg 911 Query: 247 agagcgggtaccgatagtccatggtgaacatgtccttggtaaccttaccgaactgcagga 306 |||| |||||||| |||||||||||||||||||||||| ||||||||| |||||||||| Sbjct: 910 agagagggtaccggtagtccatggtgaacatgtccttgccaaccttaccaaactgcagga 851 Query: 307 tcaccttctcgtgatcggacgtcgaaga 334 ||||||| | |||||||| | |||||| Sbjct: 850 tcaccttgccatgatcggatgccgaaga 823 Score = 103 bits (52), Expect = 6e-19 Identities = 106/124 (85%) Strand = Plus / Minus Query: 433 tcagctggaagttcttcacggaggccaccgtcacccggcctcggaagttgaggcaccagc 492 |||||||||| ||||| || || ||||| || |||||||| ||||||||||||||||| | Sbjct: 745 tcagctggaaattcttgacagaagccacagttacccggccacggaagttgaggcaccaac 686 Query: 493 actgcagctgttcgtgccatctcggcaccttgttgcggaggaccaagggcctctccttgg 552 | |||||||| || |||||||| ||||| ||||| || || ||||| ||||||||||| | Sbjct: 685 attgcagctgctcatgccatcttggcactttgtttcgtagaaccaaaggcctctccttag 626 Query: 553 cctc 556 |||| Sbjct: 625 cctc 622
>dbj|AK120706.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001B21, full insert sequence Length = 3119 Score = 159 bits (80), Expect = 1e-35 Identities = 131/148 (88%) Strand = Plus / Minus Query: 187 attcacacgccagcttggtgtcaaagctggtcaagcagatggcgaacgcctggaacgccg 246 ||||||| |||||||||||||| ||||||||||| ||||||||||| |||||||| || | Sbjct: 1844 attcacaagccagcttggtgtcgaagctggtcaaacagatggcgaaagcctggaatgctg 1785 Query: 247 agagcgggtaccgatagtccatggtgaacatgtccttggtaaccttaccgaactgcagga 306 |||| |||||||| |||||||||||||||||||||||| ||||||||| |||||||||| Sbjct: 1784 agagagggtaccggtagtccatggtgaacatgtccttgccaaccttaccaaactgcagga 1725 Query: 307 tcaccttctcgtgatcggacgtcgaaga 334 ||| ||| | |||||||| | |||||| Sbjct: 1724 tcatcttgccatgatcggatgccgaaga 1697 Score = 103 bits (52), Expect = 6e-19 Identities = 106/124 (85%) Strand = Plus / Minus Query: 433 tcagctggaagttcttcacggaggccaccgtcacccggcctcggaagttgaggcaccagc 492 |||||||||| ||||| || || ||||| || |||||||| ||||||||||||||||| | Sbjct: 1619 tcagctggaaattcttgacagaagccacagttacccggccacggaagttgaggcaccaac 1560 Query: 493 actgcagctgttcgtgccatctcggcaccttgttgcggaggaccaagggcctctccttgg 552 | |||||||| || |||||||| ||||| ||||| || || ||||| ||||||||||| | Sbjct: 1559 attgcagctgctcatgccatcttggcactttgtttcgtagaaccaaaggcctctccttag 1500 Query: 553 cctc 556 |||| Sbjct: 1499 cctc 1496
>ref|XM_474442.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1389 Score = 125 bits (63), Expect = 2e-25 Identities = 105/119 (88%) Strand = Plus / Minus Query: 433 tcagctggaagttcttcacggaggccaccgtcacccggcctcggaagttgaggcaccagc 492 ||||||||||||||||||| || ||||||||||| ||||| ||||||||||||||||||| Sbjct: 1132 tcagctggaagttcttcactgaagccaccgtcacacggccacggaagttgaggcaccagc 1073 Query: 493 actgcagctgttcgtgccatctcggcaccttgttgcggaggaccaagggcctctccttg 551 | ||||||||||| ||||| || || | ||||| ||||| ||||| |||||||||||| Sbjct: 1072 attgcagctgttcatgccaccttggtgctttgttccggagaaccaaaggcctctccttg 1014 Score = 121 bits (61), Expect = 3e-24 Identities = 109/125 (87%) Strand = Plus / Minus Query: 187 attcacacgccagcttggtgtcaaagctggtcaagcagatggcgaacgcctggaacgccg 246 ||||||| |||||||||||||||||||||||||| ||||| || || |||||||| |||| Sbjct: 1387 attcacatgccagcttggtgtcaaagctggtcaaacagatagcaaaagcctggaaggccg 1328 Query: 247 agagcgggtaccgatagtccatggtgaacatgtccttggtaaccttaccgaactgcagga 306 | | |||||||| || |||||||||||||||||||| | ||| || ||||| ||||||| Sbjct: 1327 acaatgggtaccggtaatccatggtgaacatgtcctttgcaactttgccgaattgcagga 1268 Query: 307 tcacc 311 ||||| Sbjct: 1267 tcacc 1263
>emb|AJ245900.1|OSA245900 Oryza sativa chromosome 4 BAC q3037-207F1 complete genome Length = 124321 Score = 125 bits (63), Expect = 2e-25 Identities = 105/119 (88%) Strand = Plus / Plus Query: 433 tcagctggaagttcttcacggaggccaccgtcacccggcctcggaagttgaggcaccagc 492 ||||||||||||||||||| || ||||||||||| ||||| ||||||||||||||||||| Sbjct: 98691 tcagctggaagttcttcactgaagccaccgtcacacggccacggaagttgaggcaccagc 98750 Query: 493 actgcagctgttcgtgccatctcggcaccttgttgcggaggaccaagggcctctccttg 551 | ||||||||||| ||||| || || | ||||| ||||| ||||| |||||||||||| Sbjct: 98751 attgcagctgttcatgccaccttggtgctttgttccggagaaccaaaggcctctccttg 98809 Score = 121 bits (61), Expect = 3e-24 Identities = 109/125 (87%) Strand = Plus / Plus Query: 187 attcacacgccagcttggtgtcaaagctggtcaagcagatggcgaacgcctggaacgccg 246 ||||||| |||||||||||||||||||||||||| ||||| || || |||||||| |||| Sbjct: 98436 attcacatgccagcttggtgtcaaagctggtcaaacagatagcaaaagcctggaaggccg 98495 Query: 247 agagcgggtaccgatagtccatggtgaacatgtccttggtaaccttaccgaactgcagga 306 | | |||||||| || |||||||||||||||||||| | ||| || ||||| ||||||| Sbjct: 98496 acaatgggtaccggtaatccatggtgaacatgtcctttgcaactttgccgaattgcagga 98555 Query: 307 tcacc 311 ||||| Sbjct: 98556 tcacc 98560
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 125 bits (63), Expect = 2e-25 Identities = 105/119 (88%) Strand = Plus / Minus Query: 433 tcagctggaagttcttcacggaggccaccgtcacccggcctcggaagttgaggcaccagc 492 ||||||||||||||||||| || ||||||||||| ||||| ||||||||||||||||||| Sbjct: 35214359 tcagctggaagttcttcactgaagccaccgtcacacggccacggaagttgaggcaccagc 35214300 Query: 493 actgcagctgttcgtgccatctcggcaccttgttgcggaggaccaagggcctctccttg 551 | ||||||||||| ||||| || || | ||||| ||||| ||||| |||||||||||| Sbjct: 35214299 attgcagctgttcatgccaccttggtgctttgttccggagaaccaaaggcctctccttg 35214241 Score = 121 bits (61), Expect = 3e-24 Identities = 109/125 (87%) Strand = Plus / Minus Query: 187 attcacacgccagcttggtgtcaaagctggtcaagcagatggcgaacgcctggaacgccg 246 ||||||| |||||||||||||||||||||||||| ||||| || || |||||||| |||| Sbjct: 35214614 attcacatgccagcttggtgtcaaagctggtcaaacagatagcaaaagcctggaaggccg 35214555 Query: 247 agagcgggtaccgatagtccatggtgaacatgtccttggtaaccttaccgaactgcagga 306 | | |||||||| || |||||||||||||||||||| | ||| || ||||| ||||||| Sbjct: 35214554 acaatgggtaccggtaatccatggtgaacatgtcctttgcaactttgccgaattgcagga 35214495 Query: 307 tcacc 311 ||||| Sbjct: 35214494 tcacc 35214490
>dbj|AK104333.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-G06, full insert sequence Length = 1800 Score = 125 bits (63), Expect = 2e-25 Identities = 105/119 (88%) Strand = Plus / Minus Query: 433 tcagctggaagttcttcacggaggccaccgtcacccggcctcggaagttgaggcaccagc 492 ||||||||||||||||||| || ||||||||||| ||||| ||||||||||||||||||| Sbjct: 1251 tcagctggaagttcttcactgaagccaccgtcacacggccacggaagttgaggcaccagc 1192 Query: 493 actgcagctgttcgtgccatctcggcaccttgttgcggaggaccaagggcctctccttg 551 | ||||||||||| ||||| || || | ||||| ||||| ||||| |||||||||||| Sbjct: 1191 attgcagctgttcatgccaccttggtgctttgttccggagaaccaaaggcctctccttg 1133 Score = 121 bits (61), Expect = 3e-24 Identities = 109/125 (87%) Strand = Plus / Minus Query: 187 attcacacgccagcttggtgtcaaagctggtcaagcagatggcgaacgcctggaacgccg 246 ||||||| |||||||||||||||||||||||||| ||||| || || |||||||| |||| Sbjct: 1506 attcacatgccagcttggtgtcaaagctggtcaaacagatagcaaaagcctggaaggccg 1447 Query: 247 agagcgggtaccgatagtccatggtgaacatgtccttggtaaccttaccgaactgcagga 306 | | |||||||| || |||||||||||||||||||| | ||| || ||||| ||||||| Sbjct: 1446 acaatgggtaccggtaatccatggtgaacatgtcctttgcaactttgccgaattgcagga 1387 Query: 307 tcacc 311 ||||| Sbjct: 1386 tcacc 1382
>dbj|AK098928.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013023N16, full insert sequence Length = 1826 Score = 125 bits (63), Expect = 2e-25 Identities = 105/119 (88%) Strand = Plus / Minus Query: 433 tcagctggaagttcttcacggaggccaccgtcacccggcctcggaagttgaggcaccagc 492 ||||||||||||||||||| || ||||||||||| ||||| ||||||||||||||||||| Sbjct: 1287 tcagctggaagttcttcactgaagccaccgtcacacggccacggaagttgaggcaccagc 1228 Query: 493 actgcagctgttcgtgccatctcggcaccttgttgcggaggaccaagggcctctccttg 551 | ||||||||||| ||||| || || | ||||| ||||| ||||| |||||||||||| Sbjct: 1227 attgcagctgttcatgccaccttggtgctttgttccggagaaccaaaggcctctccttg 1169 Score = 121 bits (61), Expect = 3e-24 Identities = 109/125 (87%) Strand = Plus / Minus Query: 187 attcacacgccagcttggtgtcaaagctggtcaagcagatggcgaacgcctggaacgccg 246 ||||||| |||||||||||||||||||||||||| ||||| || || |||||||| |||| Sbjct: 1542 attcacatgccagcttggtgtcaaagctggtcaaacagatagcaaaagcctggaaggccg 1483 Query: 247 agagcgggtaccgatagtccatggtgaacatgtccttggtaaccttaccgaactgcagga 306 | | |||||||| || |||||||||||||||||||| | ||| || ||||| ||||||| Sbjct: 1482 acaatgggtaccggtaatccatggtgaacatgtcctttgcaactttgccgaattgcagga 1423 Query: 307 tcacc 311 ||||| Sbjct: 1422 tcacc 1418
>dbj|AK066910.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091C11, full insert sequence Length = 1824 Score = 125 bits (63), Expect = 2e-25 Identities = 105/119 (88%) Strand = Plus / Minus Query: 433 tcagctggaagttcttcacggaggccaccgtcacccggcctcggaagttgaggcaccagc 492 ||||||||||||||||||| || ||||||||||| ||||| ||||||||||||||||||| Sbjct: 1289 tcagctggaagttcttcactgaagccaccgtcacacggccacggaagttgaggcaccagc 1230 Query: 493 actgcagctgttcgtgccatctcggcaccttgttgcggaggaccaagggcctctccttg 551 | ||||||||||| ||||| || || | ||||| ||||| ||||| |||||||||||| Sbjct: 1229 attgcagctgttcatgccaccttggtgctttgttccggagaaccaaaggcctctccttg 1171 Score = 121 bits (61), Expect = 3e-24 Identities = 109/125 (87%) Strand = Plus / Minus Query: 187 attcacacgccagcttggtgtcaaagctggtcaagcagatggcgaacgcctggaacgccg 246 ||||||| |||||||||||||||||||||||||| ||||| || || |||||||| |||| Sbjct: 1544 attcacatgccagcttggtgtcaaagctggtcaaacagatagcaaaagcctggaaggccg 1485 Query: 247 agagcgggtaccgatagtccatggtgaacatgtccttggtaaccttaccgaactgcagga 306 | | |||||||| || |||||||||||||||||||| | ||| || ||||| ||||||| Sbjct: 1484 acaatgggtaccggtaatccatggtgaacatgtcctttgcaactttgccgaattgcagga 1425 Query: 307 tcacc 311 ||||| Sbjct: 1424 tcacc 1420
>emb|AL732348.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0701F11, complete sequence Length = 82895 Score = 125 bits (63), Expect = 2e-25 Identities = 105/119 (88%) Strand = Plus / Minus Query: 433 tcagctggaagttcttcacggaggccaccgtcacccggcctcggaagttgaggcaccagc 492 ||||||||||||||||||| || ||||||||||| ||||| ||||||||||||||||||| Sbjct: 58356 tcagctggaagttcttcactgaagccaccgtcacacggccacggaagttgaggcaccagc 58297 Query: 493 actgcagctgttcgtgccatctcggcaccttgttgcggaggaccaagggcctctccttg 551 | ||||||||||| ||||| || || | ||||| ||||| ||||| |||||||||||| Sbjct: 58296 attgcagctgttcatgccaccttggtgctttgttccggagaaccaaaggcctctccttg 58238 Score = 121 bits (61), Expect = 3e-24 Identities = 109/125 (87%) Strand = Plus / Minus Query: 187 attcacacgccagcttggtgtcaaagctggtcaagcagatggcgaacgcctggaacgccg 246 ||||||| |||||||||||||||||||||||||| ||||| || || |||||||| |||| Sbjct: 58611 attcacatgccagcttggtgtcaaagctggtcaaacagatagcaaaagcctggaaggccg 58552 Query: 247 agagcgggtaccgatagtccatggtgaacatgtccttggtaaccttaccgaactgcagga 306 | | |||||||| || |||||||||||||||||||| | ||| || ||||| ||||||| Sbjct: 58551 acaatgggtaccggtaatccatggtgaacatgtcctttgcaactttgccgaattgcagga 58492 Query: 307 tcacc 311 ||||| Sbjct: 58491 tcacc 58487
>emb|AL606637.3|OSJN00076 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039K24, complete sequence Length = 173770 Score = 125 bits (63), Expect = 2e-25 Identities = 105/119 (88%) Strand = Plus / Minus Query: 433 tcagctggaagttcttcacggaggccaccgtcacccggcctcggaagttgaggcaccagc 492 ||||||||||||||||||| || ||||||||||| ||||| ||||||||||||||||||| Sbjct: 10205 tcagctggaagttcttcactgaagccaccgtcacacggccacggaagttgaggcaccagc 10146 Query: 493 actgcagctgttcgtgccatctcggcaccttgttgcggaggaccaagggcctctccttg 551 | ||||||||||| ||||| || || | ||||| ||||| ||||| |||||||||||| Sbjct: 10145 attgcagctgttcatgccaccttggtgctttgttccggagaaccaaaggcctctccttg 10087 Score = 121 bits (61), Expect = 3e-24 Identities = 109/125 (87%) Strand = Plus / Minus Query: 187 attcacacgccagcttggtgtcaaagctggtcaagcagatggcgaacgcctggaacgccg 246 ||||||| |||||||||||||||||||||||||| ||||| || || |||||||| |||| Sbjct: 10460 attcacatgccagcttggtgtcaaagctggtcaaacagatagcaaaagcctggaaggccg 10401 Query: 247 agagcgggtaccgatagtccatggtgaacatgtccttggtaaccttaccgaactgcagga 306 | | |||||||| || |||||||||||||||||||| | ||| || ||||| ||||||| Sbjct: 10400 acaatgggtaccggtaatccatggtgaacatgtcctttgcaactttgccgaattgcagga 10341 Query: 307 tcacc 311 ||||| Sbjct: 10340 tcacc 10336
>gb|BT018492.1| Zea mays clone EL01N0425D06.d mRNA sequence Length = 1326 Score = 121 bits (61), Expect = 3e-24 Identities = 112/129 (86%) Strand = Plus / Minus Query: 183 attcattcacacgccagcttggtgtcaaagctggtcaagcagatggcgaacgcctggaac 242 ||||||||||| ||||||||||||| ||||| |||| || |||||||| |||||||| Sbjct: 1121 attcattcacagaccagcttggtgtcgaagctcgtcagacatatggcgaaggcctggaag 1062 Query: 243 gccgagagcgggtaccgatagtccatggtgaacatgtccttggtaaccttaccgaactgc 302 ||||| ||||||||||| ||||||||||||||||||||| | ||||| ||||||||| Sbjct: 1061 gccgacagcgggtaccggtagtccatggtgaacatgtccctcccgaccttgccgaactgc 1002 Query: 303 aggatcacc 311 ||||||||| Sbjct: 1001 aggatcacc 993 Score = 105 bits (53), Expect = 2e-19 Identities = 86/97 (88%) Strand = Plus / Minus Query: 433 tcagctggaagttcttcacggaggccaccgtcacccggcctcggaagttgaggcaccagc 492 |||||||||||||||| || |||||||| || || || || || |||||||||||||||| Sbjct: 913 tcagctggaagttcttgaccgaggccacggtgacgcgcccgcgaaagttgaggcaccagc 854 Query: 493 actgcagctgttcgtgccatctcggcaccttgttgcg 529 |||||||||| |||||||| |||||| |||||||||| Sbjct: 853 actgcagctgctcgtgccacctcggcgccttgttgcg 817
>gb|AY109994.1| Zea mays CL768_1 mRNA sequence Length = 1906 Score = 121 bits (61), Expect = 3e-24 Identities = 121/141 (85%) Strand = Plus / Minus Query: 184 ttcattcacacgccagcttggtgtcaaagctggtcaagcagatggcgaacgcctggaacg 243 ||||||| || |||||||||||||| |||||| ||| |||||| ||||| |||||||| | Sbjct: 1477 ttcattcgcaggccagcttggtgtcgaagctgctcaggcagatcgcgaaggcctggaagg 1418 Query: 244 ccgagagcgggtaccgatagtccatggtgaacatgtccttggtaaccttaccgaactgca 303 | || || ||||| || ||||||||||||||||||||||| | ||||| || || |||| Sbjct: 1417 ctgacagtgggtaacggtagtccatggtgaacatgtccttagccaccttcccaaattgca 1358 Query: 304 ggatcaccttctcgtgatcgg 324 |||||||||||||||| |||| Sbjct: 1357 ggatcaccttctcgtgctcgg 1337 Score = 97.6 bits (49), Expect = 4e-17 Identities = 100/117 (85%) Strand = Plus / Minus Query: 435 agctggaagttcttcacggaggccaccgtcacccggcctcggaagttgaggcaccagcac 494 ||||||||||||||||| || || || ||||||| ||| | ||| ||||||||||||||| Sbjct: 1274 agctggaagttcttcacagatgcgactgtcaccctgcccctgaaattgaggcaccagcac 1215 Query: 495 tgcagctgttcgtgccatctcggcaccttgttgcggaggaccaagggcctctccttg 551 |||||||| |||||||| || || ||||||| ||||| | ||| |||||||||||| Sbjct: 1214 tgcagctgctcgtgccaccttggggccttgttccggagaatcaatggcctctccttg 1158
>gb|AY106234.1| Zea mays PCO071899 mRNA sequence Length = 1449 Score = 115 bits (58), Expect = 2e-22 Identities = 103/118 (87%) Strand = Plus / Minus Query: 199 gcttggtgtcaaagctggtcaagcagatggcgaacgcctggaacgccgagagcgggtacc 258 |||||||||| |||||||||| |||||| ||||| ||||||||||||||||| ||||||| Sbjct: 1160 gcttggtgtcgaagctggtcaggcagatcgcgaaggcctggaacgccgagagtgggtacc 1101 Query: 259 gatagtccatggtgaacatgtccttggtaaccttaccgaactgcaggatcaccttctc 316 | |||||||||||||| || ||||| | ||| |||||||| |||||||||||||| Sbjct: 1100 ggtagtccatggtgaatatatccttcccgatcttcccgaactggaggatcaccttctc 1043 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 435 agctggaagttcttcacggaggccaccgtcacccggcctcggaagttgaggcaccagcac 494 ||||||||||||||||| || || || || || || || ||||||||||||||||| ||| Sbjct: 996 agctggaagttcttcactgacgcgacggtgacacgcccccggaagttgaggcaccaacac 937 Query: 495 tgcagctgttcgtgcca 511 |||||||| || ||||| Sbjct: 936 tgcagctgctcatgcca 920
>gb|BT016712.1| Zea mays clone Contig545 mRNA sequence Length = 1715 Score = 113 bits (57), Expect = 7e-22 Identities = 102/117 (87%) Strand = Plus / Minus Query: 435 agctggaagttcttcacggaggccaccgtcacccggcctcggaagttgaggcaccagcac 494 |||||||||||||| || ||||| || ||||||||||| ||||||||||||||||||||| Sbjct: 1050 agctggaagttcttgaccgaggcgacagtcacccggccccggaagttgaggcaccagcac 991 Query: 495 tgcagctgttcgtgccatctcggcaccttgttgcggaggaccaagggcctctccttg 551 || ||||| |||||||| || || ||||||||||||||| ||| ||| | |||||| Sbjct: 990 tgaagctgctcgtgccaccttggggccttgttgcggaggatcaaaggcatgtccttg 934 Score = 85.7 bits (43), Expect = 1e-13 Identities = 94/111 (84%) Strand = Plus / Minus Query: 195 gccagcttggtgtcaaagctggtcaagcagatggcgaacgcctggaacgccgagagcggg 254 |||| ||||||||| |||||| ||| |||||||||||| |||||||| || || |||||| Sbjct: 1260 gccaacttggtgtcgaagctgctcaggcagatggcgaaggcctggaaggctgacagcggg 1201 Query: 255 taccgatagtccatggtgaacatgtccttggtaaccttaccgaactgcagg 305 || | |||||||||||||| ||||||||| ||||| || ||||||||| Sbjct: 1200 tagcagtagtccatggtgaagatgtccttgccgaccttcccaaactgcagg 1150
>gb|BT018325.1| Zea mays clone EL01T0208B12.c mRNA sequence Length = 1103 Score = 107 bits (54), Expect = 4e-20 Identities = 102/118 (86%) Strand = Plus / Minus Query: 199 gcttggtgtcaaagctggtcaagcagatggcgaacgcctggaacgccgagagcgggtacc 258 |||||||||| |||||||||| |||||| ||||| ||||||||||||||||| ||||||| Sbjct: 903 gcttggtgtcgaagctggtcaggcagatcgcgaaggcctggaacgccgagagtgggtacc 844 Query: 259 gatagtccatggtgaacatgtccttggtaaccttaccgaactgcaggatcaccttctc 316 | |||||||||||||| || ||||| | ||| |||||||| |||||||| ||||| Sbjct: 843 ggtagtccatggtgaatatatccttcccgatcttcccgaactggaggatcactttctc 786 Score = 81.8 bits (41), Expect = 2e-12 Identities = 68/77 (88%) Strand = Plus / Minus Query: 435 agctggaagttcttcacggaggccaccgtcacccggcctcggaagttgaggcaccagcac 494 ||||||||||||||||| || || || || || || || ||||||||||||||||||||| Sbjct: 739 agctggaagttcttcaccgaagcgacggtgacacgcccccggaagttgaggcaccagcac 680 Query: 495 tgcagctgttcgtgcca 511 |||||||| |||||||| Sbjct: 679 tgcagctgctcgtgcca 663
>gb|AY111565.1| Zea mays CL11715_1 mRNA sequence Length = 586 Score = 105 bits (53), Expect = 2e-19 Identities = 86/97 (88%) Strand = Plus / Plus Query: 214 tggtcaagcagatggcgaacgcctggaacgccgagagcgggtaccgatagtccatggtga 273 ||||||| ||||||||||| |||||||| |||||||| ||||| || |||||||| |||| Sbjct: 377 tggtcaaacagatggcgaaggcctggaatgccgagagtgggtatcggtagtccatagtga 436 Query: 274 acatgtccttggtaaccttaccgaactgcaggatcac 310 ||||||| |||| |||||||| |||||||||||||| Sbjct: 437 acatgtcattggcgaccttaccaaactgcaggatcac 473
>gb|AY108213.1| Zea mays PCO076139 mRNA sequence Length = 1391 Score = 103 bits (52), Expect = 6e-19 Identities = 103/120 (85%) Strand = Plus / Minus Query: 433 tcagctggaagttcttcacggaggccaccgtcacccggcctcggaagttgaggcaccagc 492 ||||||||||||||||||| ||||| | ||||| ||||| ||||||||||||||||| | Sbjct: 909 tcagctggaagttcttcaccgaggcaattgtcacacggccacggaagttgaggcaccaac 850 Query: 493 actgcagctgttcgtgccatctcggcaccttgttgcggaggaccaagggcctctccttgg 552 ||||||||||||||||||| || ||| ||| || || || |||| ||||||||||||| Sbjct: 849 actgcagctgttcgtgccacctaggcggcttattacgaagcaccagtggcctctccttgg 790 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 225 atggcgaacgcctggaacgccgagagcgggtaccgatagtccatggtgaacat 277 ||||| || |||||||| |||||||| ||||| ||||||||||| |||||||| Sbjct: 1066 atggcaaaggcctggaaagccgagagagggtagcgatagtccatcgtgaacat 1014
>ref|NM_190757.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1347 Score = 91.7 bits (46), Expect = 2e-15 Identities = 100/118 (84%) Strand = Plus / Minus Query: 434 cagctggaagttcttcacggaggccaccgtcacccggcctcggaagttgaggcaccagca 493 ||||||||| |||||||| ||||| | || || ||||| |||||||| ||||||||||| Sbjct: 1149 cagctggaaattcttcactgaggcaatggtgacacggccacggaagttcaggcaccagca 1090 Query: 494 ctgcagctgttcgtgccatctcggcaccttgttgcggaggaccaagggcctctccttg 551 ||| ||||| || ||||||||||| |||||| ||||| || ||||||||||||||| Sbjct: 1089 ctgtagctgctcatgccatctcgggggcttgttacggagcactaagggcctctccttg 1032
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 91.7 bits (46), Expect = 2e-15 Identities = 100/118 (84%) Strand = Plus / Plus Query: 435 agctggaagttcttcacggaggccaccgtcacccggcctcggaagttgaggcaccagcac 494 ||||||||||||||||| || || || || |||| ||| ||||||||||||||||||| Sbjct: 3212212 agctggaagttcttcacagacgcgacggttaccctgcccttgaagttgaggcaccagcac 3212271 Query: 495 tgcagctgttcgtgccatctcggcaccttgttgcggaggaccaagggcctctccttgg 552 |||| ||| ||||||||||| || ||||||| ||||| | ||| ||||||||||||| Sbjct: 3212272 tgcaactgctcgtgccatcttggggccttgttacggagaatcaatggcctctccttgg 3212329 Score = 87.7 bits (44), Expect = 4e-14 Identities = 95/112 (84%) Strand = Plus / Plus Query: 184 ttcattcacacgccagcttggtgtcaaagctggtcaagcagatggcgaacgcctggaacg 243 ||||||| || |||||||||||||| || || |||||||||| || || |||||||| | Sbjct: 3212006 ttcattcgcaggccagcttggtgtcgaaactactcaagcagattgcaaaggcctggaagg 3212065 Query: 244 ccgagagcgggtaccgatagtccatggtgaacatgtccttggtaaccttacc 295 |||| || ||||| ||||||||||| |||||||| ||||| | ||||||||| Sbjct: 3212066 ccgaaagggggtaacgatagtccattgtgaacatatccttcgcaaccttacc 3212117
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 91.7 bits (46), Expect = 2e-15 Identities = 100/118 (84%) Strand = Plus / Minus Query: 434 cagctggaagttcttcacggaggccaccgtcacccggcctcggaagttgaggcaccagca 493 ||||||||| |||||||| ||||| | || || ||||| |||||||| ||||||||||| Sbjct: 37532128 cagctggaaattcttcactgaggcaatggtgacacggccacggaagttcaggcaccagca 37532069 Query: 494 ctgcagctgttcgtgccatctcggcaccttgttgcggaggaccaagggcctctccttg 551 ||| ||||| || ||||||||||| |||||| ||||| || ||||||||||||||| Sbjct: 37532068 ctgtagctgctcatgccatctcgggggcttgttacggagcactaagggcctctccttg 37532011
>dbj|AP003270.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0505D12 Length = 146951 Score = 91.7 bits (46), Expect = 2e-15 Identities = 100/118 (84%) Strand = Plus / Minus Query: 434 cagctggaagttcttcacggaggccaccgtcacccggcctcggaagttgaggcaccagca 493 ||||||||| |||||||| ||||| | || || ||||| |||||||| ||||||||||| Sbjct: 126665 cagctggaaattcttcactgaggcaatggtgacacggccacggaagttcaggcaccagca 126606 Query: 494 ctgcagctgttcgtgccatctcggcaccttgttgcggaggaccaagggcctctccttg 551 ||| ||||| || ||||||||||| |||||| ||||| || ||||||||||||||| Sbjct: 126605 ctgtagctgctcatgccatctcgggggcttgttacggagcactaagggcctctccttg 126548
>dbj|AK102298.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033089L13, full insert sequence Length = 1941 Score = 91.7 bits (46), Expect = 2e-15 Identities = 100/118 (84%) Strand = Plus / Minus Query: 435 agctggaagttcttcacggaggccaccgtcacccggcctcggaagttgaggcaccagcac 494 ||||||||||||||||| || || || || |||| ||| ||||||||||||||||||| Sbjct: 1307 agctggaagttcttcacagacgcgacggttaccctgcccttgaagttgaggcaccagcac 1248 Query: 495 tgcagctgttcgtgccatctcggcaccttgttgcggaggaccaagggcctctccttgg 552 |||| ||| ||||||||||| || ||||||| ||||| | ||| ||||||||||||| Sbjct: 1247 tgcaactgctcgtgccatcttggggccttgttacggagaatcaatggcctctccttgg 1190 Score = 87.7 bits (44), Expect = 4e-14 Identities = 95/112 (84%) Strand = Plus / Minus Query: 184 ttcattcacacgccagcttggtgtcaaagctggtcaagcagatggcgaacgcctggaacg 243 ||||||| || |||||||||||||| || || |||||||||| || || |||||||| | Sbjct: 1513 ttcattcgcaggccagcttggtgtcgaaactactcaagcagattgcaaaggcctggaagg 1454 Query: 244 ccgagagcgggtaccgatagtccatggtgaacatgtccttggtaaccttacc 295 |||| || ||||| ||||||||||| |||||||| ||||| | ||||||||| Sbjct: 1453 ccgaaagggggtaacgatagtccattgtgaacatatccttcgcaaccttacc 1402
>gb|AY108848.1| Zea mays PCO063380 mRNA sequence Length = 604 Score = 91.7 bits (46), Expect = 2e-15 Identities = 103/122 (84%) Strand = Plus / Minus Query: 195 gccagcttggtgtcaaagctggtcaagcagatggcgaacgcctggaacgccgagagcggg 254 |||| ||||||||| |||||| ||| |||||||||||| |||||||| || || |||||| Sbjct: 207 gccaacttggtgtcgaagctgctcaggcagatggcgaaggcctggaaggctgacagcggg 148 Query: 255 taccgatagtccatggtgaacatgtccttggtaaccttaccgaactgcaggatcaccttc 314 || | |||||||||||||| ||||||||| ||||| || |||||||| || |||||| Sbjct: 147 tagcagtagtccatggtgaagatgtccttgccgaccttcccaaactgcagtatgaccttc 88 Query: 315 tc 316 || Sbjct: 87 tc 86
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 91.7 bits (46), Expect = 2e-15 Identities = 100/118 (84%) Strand = Plus / Plus Query: 435 agctggaagttcttcacggaggccaccgtcacccggcctcggaagttgaggcaccagcac 494 ||||||||||||||||| || || || || |||| ||| ||||||||||||||||||| Sbjct: 3212157 agctggaagttcttcacagacgcgacggttaccctgcccttgaagttgaggcaccagcac 3212216 Query: 495 tgcagctgttcgtgccatctcggcaccttgttgcggaggaccaagggcctctccttgg 552 |||| ||| ||||||||||| || ||||||| ||||| | ||| ||||||||||||| Sbjct: 3212217 tgcaactgctcgtgccatcttggggccttgttacggagaatcaatggcctctccttgg 3212274 Score = 87.7 bits (44), Expect = 4e-14 Identities = 95/112 (84%) Strand = Plus / Plus Query: 184 ttcattcacacgccagcttggtgtcaaagctggtcaagcagatggcgaacgcctggaacg 243 ||||||| || |||||||||||||| || || |||||||||| || || |||||||| | Sbjct: 3211951 ttcattcgcaggccagcttggtgtcgaaactactcaagcagattgcaaaggcctggaagg 3212010 Query: 244 ccgagagcgggtaccgatagtccatggtgaacatgtccttggtaaccttacc 295 |||| || ||||| ||||||||||| |||||||| ||||| | ||||||||| Sbjct: 3212011 ccgaaagggggtaacgatagtccattgtgaacatatccttcgcaaccttacc 3212062
>emb|AL713936.4|CNS07YPH Oryza sativa chromosome 12, . BAC OJ1057_G11 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 109081 Score = 91.7 bits (46), Expect = 2e-15 Identities = 100/118 (84%) Strand = Plus / Plus Query: 435 agctggaagttcttcacggaggccaccgtcacccggcctcggaagttgaggcaccagcac 494 ||||||||||||||||| || || || || |||| ||| ||||||||||||||||||| Sbjct: 2598 agctggaagttcttcacagacgcgacggttaccctgcccttgaagttgaggcaccagcac 2657 Query: 495 tgcagctgttcgtgccatctcggcaccttgttgcggaggaccaagggcctctccttgg 552 |||| ||| ||||||||||| || ||||||| ||||| | ||| ||||||||||||| Sbjct: 2658 tgcaactgctcgtgccatcttggggccttgttacggagaatcaatggcctctccttgg 2715 Score = 87.7 bits (44), Expect = 4e-14 Identities = 95/112 (84%) Strand = Plus / Plus Query: 184 ttcattcacacgccagcttggtgtcaaagctggtcaagcagatggcgaacgcctggaacg 243 ||||||| || |||||||||||||| || || |||||||||| || || |||||||| | Sbjct: 2392 ttcattcgcaggccagcttggtgtcgaaactactcaagcagattgcaaaggcctggaagg 2451 Query: 244 ccgagagcgggtaccgatagtccatggtgaacatgtccttggtaaccttacc 295 |||| || ||||| ||||||||||| |||||||| ||||| | ||||||||| Sbjct: 2452 ccgaaagggggtaacgatagtccattgtgaacatatccttcgcaaccttacc 2503
>emb|AL713906.3|CNS07YQ6 Oryza sativa chromosome 12, . BAC OJ1587_D05 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 90756 Score = 91.7 bits (46), Expect = 2e-15 Identities = 100/118 (84%) Strand = Plus / Minus Query: 435 agctggaagttcttcacggaggccaccgtcacccggcctcggaagttgaggcaccagcac 494 ||||||||||||||||| || || || || |||| ||| ||||||||||||||||||| Sbjct: 5452 agctggaagttcttcacagacgcgacggttaccctgcccttgaagttgaggcaccagcac 5393 Query: 495 tgcagctgttcgtgccatctcggcaccttgttgcggaggaccaagggcctctccttgg 552 |||| ||| ||||||||||| || ||||||| ||||| | ||| ||||||||||||| Sbjct: 5392 tgcaactgctcgtgccatcttggggccttgttacggagaatcaatggcctctccttgg 5335 Score = 87.7 bits (44), Expect = 4e-14 Identities = 95/112 (84%) Strand = Plus / Minus Query: 184 ttcattcacacgccagcttggtgtcaaagctggtcaagcagatggcgaacgcctggaacg 243 ||||||| || |||||||||||||| || || |||||||||| || || |||||||| | Sbjct: 5658 ttcattcgcaggccagcttggtgtcgaaactactcaagcagattgcaaaggcctggaagg 5599 Query: 244 ccgagagcgggtaccgatagtccatggtgaacatgtccttggtaaccttacc 295 |||| || ||||| ||||||||||| |||||||| ||||| | ||||||||| Sbjct: 5598 ccgaaagggggtaacgatagtccattgtgaacatatccttcgcaaccttacc 5547
>ref|XM_467371.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2345 Score = 89.7 bits (45), Expect = 9e-15 Identities = 84/97 (86%) Strand = Plus / Minus Query: 187 attcacacgccagcttggtgtcaaagctggtcaagcagatggcgaacgcctggaacgccg 246 |||| |||||| | |||||||||||||| |||| |||||| || || ||||||||||||| Sbjct: 1964 attcgcacgccggtttggtgtcaaagctagtcaggcagatcgcaaatgcctggaacgccg 1905 Query: 247 agagcgggtaccgatagtccatggtgaacatgtcctt 283 |||||||||||| ||| ||||| ||||| || ||||| Sbjct: 1904 agagcgggtacctataatccattgtgaatatatcctt 1868 Score = 73.8 bits (37), Expect = 6e-10 Identities = 67/77 (87%) Strand = Plus / Minus Query: 435 agctggaagttcttcacggaggccaccgtcacccggcctcggaagttgaggcaccagcac 494 |||||||||||||| || || || || || || || |||||||||||||||||||||||| Sbjct: 1788 agctggaagttcttgactgatgctactgtaacacgccctcggaagttgaggcaccagcac 1729 Query: 495 tgcagctgttcgtgcca 511 |||||||| || ||||| Sbjct: 1728 tgcagctgctcatgcca 1712
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 89.7 bits (45), Expect = 9e-15 Identities = 84/97 (86%) Strand = Plus / Minus Query: 187 attcacacgccagcttggtgtcaaagctggtcaagcagatggcgaacgcctggaacgccg 246 |||| |||||| | |||||||||||||| |||| |||||| || || ||||||||||||| Sbjct: 29130176 attcgcacgccggtttggtgtcaaagctagtcaggcagatcgcaaatgcctggaacgccg 29130117 Query: 247 agagcgggtaccgatagtccatggtgaacatgtcctt 283 |||||||||||| ||| ||||| ||||| || ||||| Sbjct: 29130116 agagcgggtacctataatccattgtgaatatatcctt 29130080 Score = 73.8 bits (37), Expect = 6e-10 Identities = 67/77 (87%) Strand = Plus / Minus Query: 435 agctggaagttcttcacggaggccaccgtcacccggcctcggaagttgaggcaccagcac 494 |||||||||||||| || || || || || || || |||||||||||||||||||||||| Sbjct: 29130000 agctggaagttcttgactgatgctactgtaacacgccctcggaagttgaggcaccagcac 29129941 Query: 495 tgcagctgttcgtgcca 511 |||||||| || ||||| Sbjct: 29129940 tgcagctgctcatgcca 29129924
>dbj|AP005323.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0680A05 Length = 168092 Score = 89.7 bits (45), Expect = 9e-15 Identities = 84/97 (86%) Strand = Plus / Minus Query: 187 attcacacgccagcttggtgtcaaagctggtcaagcagatggcgaacgcctggaacgccg 246 |||| |||||| | |||||||||||||| |||| |||||| || || ||||||||||||| Sbjct: 20144 attcgcacgccggtttggtgtcaaagctagtcaggcagatcgcaaatgcctggaacgccg 20085 Query: 247 agagcgggtaccgatagtccatggtgaacatgtcctt 283 |||||||||||| ||| ||||| ||||| || ||||| Sbjct: 20084 agagcgggtacctataatccattgtgaatatatcctt 20048 Score = 73.8 bits (37), Expect = 6e-10 Identities = 67/77 (87%) Strand = Plus / Minus Query: 435 agctggaagttcttcacggaggccaccgtcacccggcctcggaagttgaggcaccagcac 494 |||||||||||||| || || || || || || || |||||||||||||||||||||||| Sbjct: 19968 agctggaagttcttgactgatgctactgtaacacgccctcggaagttgaggcaccagcac 19909 Query: 495 tgcagctgttcgtgcca 511 |||||||| || ||||| Sbjct: 19908 tgcagctgctcatgcca 19892
>dbj|AK101936.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033074D16, full insert sequence Length = 3316 Score = 89.7 bits (45), Expect = 9e-15 Identities = 84/97 (86%) Strand = Plus / Minus Query: 187 attcacacgccagcttggtgtcaaagctggtcaagcagatggcgaacgcctggaacgccg 246 |||| |||||| | |||||||||||||| |||| |||||| || || ||||||||||||| Sbjct: 3012 attcgcacgccggtttggtgtcaaagctagtcaggcagatcgcaaatgcctggaacgccg 2953 Query: 247 agagcgggtaccgatagtccatggtgaacatgtcctt 283 |||||||||||| ||| ||||| ||||| || ||||| Sbjct: 2952 agagcgggtacctataatccattgtgaatatatcctt 2916 Score = 73.8 bits (37), Expect = 6e-10 Identities = 67/77 (87%) Strand = Plus / Minus Query: 435 agctggaagttcttcacggaggccaccgtcacccggcctcggaagttgaggcaccagcac 494 |||||||||||||| || || || || || || || |||||||||||||||||||||||| Sbjct: 2836 agctggaagttcttgactgatgctactgtaacacgccctcggaagttgaggcaccagcac 2777 Query: 495 tgcagctgttcgtgcca 511 |||||||| || ||||| Sbjct: 2776 tgcagctgctcatgcca 2760
>dbj|AK064855.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000H10, full insert sequence Length = 2345 Score = 89.7 bits (45), Expect = 9e-15 Identities = 84/97 (86%) Strand = Plus / Minus Query: 187 attcacacgccagcttggtgtcaaagctggtcaagcagatggcgaacgcctggaacgccg 246 |||| |||||| | |||||||||||||| |||| |||||| || || ||||||||||||| Sbjct: 1964 attcgcacgccggtttggtgtcaaagctagtcaggcagatcgcaaatgcctggaacgccg 1905 Query: 247 agagcgggtaccgatagtccatggtgaacatgtcctt 283 |||||||||||| ||| ||||| ||||| || ||||| Sbjct: 1904 agagcgggtacctataatccattgtgaatatatcctt 1868 Score = 73.8 bits (37), Expect = 6e-10 Identities = 67/77 (87%) Strand = Plus / Minus Query: 435 agctggaagttcttcacggaggccaccgtcacccggcctcggaagttgaggcaccagcac 494 |||||||||||||| || || || || || || || |||||||||||||||||||||||| Sbjct: 1788 agctggaagttcttgactgatgctactgtaacacgccctcggaagttgaggcaccagcac 1729 Query: 495 tgcagctgttcgtgcca 511 |||||||| || ||||| Sbjct: 1728 tgcagctgctcatgcca 1712
>dbj|AK062089.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-G09, full insert sequence Length = 1571 Score = 89.7 bits (45), Expect = 9e-15 Identities = 84/97 (86%) Strand = Plus / Minus Query: 187 attcacacgccagcttggtgtcaaagctggtcaagcagatggcgaacgcctggaacgccg 246 |||| |||||| | |||||||||||||| |||| |||||| || || ||||||||||||| Sbjct: 1267 attcgcacgccggtttggtgtcaaagctagtcaggcagatcgcaaatgcctggaacgccg 1208 Query: 247 agagcgggtaccgatagtccatggtgaacatgtcctt 283 |||||||||||| ||| ||||| ||||| || ||||| Sbjct: 1207 agagcgggtacctataatccattgtgaatatatcctt 1171 Score = 73.8 bits (37), Expect = 6e-10 Identities = 67/77 (87%) Strand = Plus / Minus Query: 435 agctggaagttcttcacggaggccaccgtcacccggcctcggaagttgaggcaccagcac 494 |||||||||||||| || || || || || || || |||||||||||||||||||||||| Sbjct: 1091 agctggaagttcttgactgatgctactgtaacacgccctcggaagttgaggcaccagcac 1032 Query: 495 tgcagctgttcgtgcca 511 |||||||| || ||||| Sbjct: 1031 tgcagctgctcatgcca 1015
>dbj|AP004525.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT08O18, TM0052b, complete sequence Length = 86497 Score = 85.7 bits (43), Expect = 1e-13 Identities = 97/115 (84%) Strand = Plus / Plus Query: 187 attcacacgccagcttggtgtcaaagctggtcaagcagatggcgaacgcctggaacgccg 246 ||||||| |||| || ||||| ||||| |||||||| ||||| || ||||| || || | Sbjct: 74982 attcacatgccaattttgtgtcgaagctagtcaagcaaatggcaaaagcctgaaatgcag 75041 Query: 247 agagcgggtaccgatagtccatggtgaacatgtccttggtaaccttaccgaactg 301 | |||||||||||||||||||| || |||||||||||| |||||| |||||||| Sbjct: 75042 acagcgggtaccgatagtccattgtaaacatgtccttgccaaccttcccgaactg 75096 Score = 73.8 bits (37), Expect = 6e-10 Identities = 73/85 (85%) Strand = Plus / Plus Query: 433 tcagctggaagttcttcacggaggccaccgtcacccggcctcggaagttgaggcaccagc 492 |||||||||| ||||| || || || || ||||| ||||| | ||||||||| ||||||| Sbjct: 75198 tcagctggaaattcttgaccgacgcgacagtcactcggcccctgaagttgagacaccagc 75257 Query: 493 actgcagctgttcgtgccatctcgg 517 | ||||||||||| ||||||||||| Sbjct: 75258 attgcagctgttcatgccatctcgg 75282
>dbj|AK102221.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033087L15, full insert sequence Length = 1994 Score = 83.8 bits (42), Expect = 6e-13 Identities = 99/118 (83%) Strand = Plus / Minus Query: 434 cagctggaagttcttcacggaggccaccgtcacccggcctcggaagttgaggcaccagca 493 ||||||||| |||||||| ||||| | || || ||||| |||||||| ||||||||||| Sbjct: 1519 cagctggaaattcttcactgaggcaatggtgacacggccacggaagttcaggcaccagca 1460 Query: 494 ctgcagctgttcgtgccatctcggcaccttgttgcggaggaccaagggcctctccttg 551 ||| ||||| || |||||||||| |||||| ||||| || ||||||||||||||| Sbjct: 1459 ctgtagctgctcatgccatctcgtgggcttgttacggagcactaagggcctctccttg 1402
>ref|NM_186089.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1687 Score = 79.8 bits (40), Expect = 9e-12 Identities = 73/84 (86%) Strand = Plus / Minus Query: 434 cagctggaagttcttcacggaggccaccgtcacccggcctcggaagttgaggcaccagca 493 ||||||||||||||| || || || ||||| ||||| || ||||||| ||||||||||| Sbjct: 1241 cagctggaagttctttaccgatgcaaccgttacccgtccatggaagttaaggcaccagca 1182 Query: 494 ctgcagctgttcgtgccatctcgg 517 |||||| ||||||||||| ||||| Sbjct: 1181 ctgcagatgttcgtgccacctcgg 1158 Score = 60.0 bits (30), Expect = 8e-06 Identities = 90/110 (81%) Strand = Plus / Minus Query: 201 ttggtgtcaaagctggtcaagcagatggcgaacgcctggaacgccgagagcgggtaccga 260 ||||||||||||||| ||| || || || |||||||| || ||||||| || || || Sbjct: 1396 ttggtgtcaaagctgctcagacatatcgcaaacgcctgaaatgccgagataggatagcgg 1337 Query: 261 tagtccatggtgaacatgtccttggtaaccttaccgaactgcaggatcac 310 || |||||||||||||||||||| ||| ||||| ||||| |||||||| Sbjct: 1336 taatccatggtgaacatgtccttcccaactttaccaaactggaggatcac 1287
>ref|XM_506548.1| PREDICTED Oryza sativa (japonica cultivar-group), P0450A04.117 mRNA Length = 1949 Score = 79.8 bits (40), Expect = 9e-12 Identities = 73/84 (86%) Strand = Plus / Minus Query: 434 cagctggaagttcttcacggaggccaccgtcacccggcctcggaagttgaggcaccagca 493 ||||||||||||||| || || || ||||| ||||| || ||||||| ||||||||||| Sbjct: 1296 cagctggaagttctttaccgatgcaaccgttacccgtccatggaagttaaggcaccagca 1237 Query: 494 ctgcagctgttcgtgccatctcgg 517 |||||| ||||||||||| ||||| Sbjct: 1236 ctgcagatgttcgtgccacctcgg 1213 Score = 60.0 bits (30), Expect = 8e-06 Identities = 90/110 (81%) Strand = Plus / Minus Query: 201 ttggtgtcaaagctggtcaagcagatggcgaacgcctggaacgccgagagcgggtaccga 260 ||||||||||||||| ||| || || || |||||||| || ||||||| || || || Sbjct: 1451 ttggtgtcaaagctgctcagacatatcgcaaacgcctgaaatgccgagataggatagcgg 1392 Query: 261 tagtccatggtgaacatgtccttggtaaccttaccgaactgcaggatcac 310 || |||||||||||||||||||| ||| ||||| ||||| |||||||| Sbjct: 1391 taatccatggtgaacatgtccttcccaactttaccaaactggaggatcac 1342
>gb|AC132485.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0022D06, complete sequence Length = 142068 Score = 79.8 bits (40), Expect = 9e-12 Identities = 103/124 (83%) Strand = Plus / Minus Query: 187 attcacacgccagcttggtgtcaaagctggtcaagcagatggcgaacgcctggaacgccg 246 ||||||| |||||||| ||| ||||||| || | ||||||||||||||||||||| || | Sbjct: 35574 attcacaggccagcttcgtgccaaagcttgtgaggcagatggcgaacgcctggaaggctg 35515 Query: 247 agagcgggtaccgatagtccatggtgaacatgtccttggtaaccttaccgaactgcagga 306 | ||||| | ||| |||||||| |||||| ||| | || ||||||||||||||||| Sbjct: 35514 acagcggctgccggtagtccatcgtgaacgcgtcgtcctcaatcttaccgaactgcagga 35455 Query: 307 tcac 310 |||| Sbjct: 35454 tcac 35451 Score = 69.9 bits (35), Expect = 9e-09 Identities = 68/79 (86%) Strand = Plus / Minus Query: 435 agctggaagttcttcacggaggccaccgtcacccggcctcggaagttgaggcaccagcac 494 ||||||||||||||||| ||||| || ||||||||||| |||| || | |||||||||| Sbjct: 35398 agctggaagttcttcaccgaggcgacggtcacccggccatggaaattcaagcaccagcac 35339 Query: 495 tgcagctgttcgtgccatc 513 ||||| || || ||||||| Sbjct: 35338 tgcagatgctcatgccatc 35320
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 79.8 bits (40), Expect = 9e-12 Identities = 73/84 (86%) Strand = Plus / Minus Query: 434 cagctggaagttcttcacggaggccaccgtcacccggcctcggaagttgaggcaccagca 493 ||||||||||||||| || || || ||||| ||||| || ||||||| ||||||||||| Sbjct: 28122588 cagctggaagttctttaccgatgcaaccgttacccgtccatggaagttaaggcaccagca 28122529 Query: 494 ctgcagctgttcgtgccatctcgg 517 |||||| ||||||||||| ||||| Sbjct: 28122528 ctgcagatgttcgtgccacctcgg 28122505 Score = 60.0 bits (30), Expect = 8e-06 Identities = 90/110 (81%) Strand = Plus / Minus Query: 201 ttggtgtcaaagctggtcaagcagatggcgaacgcctggaacgccgagagcgggtaccga 260 ||||||||||||||| ||| || || || |||||||| || ||||||| || || || Sbjct: 28122743 ttggtgtcaaagctgctcagacatatcgcaaacgcctgaaatgccgagataggatagcgg 28122684 Query: 261 tagtccatggtgaacatgtccttggtaaccttaccgaactgcaggatcac 310 || |||||||||||||||||||| ||| ||||| ||||| |||||||| Sbjct: 28122683 taatccatggtgaacatgtccttcccaactttaccaaactggaggatcac 28122634
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 79.8 bits (40), Expect = 9e-12 Identities = 103/124 (83%) Strand = Plus / Minus Query: 187 attcacacgccagcttggtgtcaaagctggtcaagcagatggcgaacgcctggaacgccg 246 ||||||| |||||||| ||| ||||||| || | ||||||||||||||||||||| || | Sbjct: 25300970 attcacaggccagcttcgtgccaaagcttgtgaggcagatggcgaacgcctggaaggctg 25300911 Query: 247 agagcgggtaccgatagtccatggtgaacatgtccttggtaaccttaccgaactgcagga 306 | ||||| | ||| |||||||| |||||| ||| | || ||||||||||||||||| Sbjct: 25300910 acagcggctgccggtagtccatcgtgaacgcgtcgtcctcaatcttaccgaactgcagga 25300851 Query: 307 tcac 310 |||| Sbjct: 25300850 tcac 25300847 Score = 69.9 bits (35), Expect = 9e-09 Identities = 68/79 (86%) Strand = Plus / Minus Query: 435 agctggaagttcttcacggaggccaccgtcacccggcctcggaagttgaggcaccagcac 494 ||||||||||||||||| ||||| || ||||||||||| |||| || | |||||||||| Sbjct: 25300794 agctggaagttcttcaccgaggcgacggtcacccggccatggaaattcaagcaccagcac 25300735 Query: 495 tgcagctgttcgtgccatc 513 ||||| || || ||||||| Sbjct: 25300734 tgcagatgctcatgccatc 25300716 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Minus Query: 221 gcagatggcgaacgcctggaacgccgagag 250 |||||||||||| ||||| ||||||||||| Sbjct: 27675330 gcagatggcgaaagcctgaaacgccgagag 27675301 Score = 40.1 bits (20), Expect = 7.8 Identities = 53/64 (82%) Strand = Plus / Minus Query: 435 agctggaagttcttcacggaggccaccgtcacccggcctcggaagttgaggcaccagcac 494 |||||||| ||||||||||| || || ||||| || || | ||||| | |||||||||| Sbjct: 27675188 agctggaaattcttcacggatgcaactgtcactcgcccatgaaagtttaagcaccagcac 27675129 Query: 495 tgca 498 |||| Sbjct: 27675128 tgca 27675125
>dbj|AP004274.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0450A04 Length = 162545 Score = 79.8 bits (40), Expect = 9e-12 Identities = 73/84 (86%) Strand = Plus / Minus Query: 434 cagctggaagttcttcacggaggccaccgtcacccggcctcggaagttgaggcaccagca 493 ||||||||||||||| || || || ||||| ||||| || ||||||| ||||||||||| Sbjct: 105884 cagctggaagttctttaccgatgcaaccgttacccgtccatggaagttaaggcaccagca 105825 Query: 494 ctgcagctgttcgtgccatctcgg 517 |||||| ||||||||||| ||||| Sbjct: 105824 ctgcagatgttcgtgccacctcgg 105801 Score = 60.0 bits (30), Expect = 8e-06 Identities = 90/110 (81%) Strand = Plus / Minus Query: 201 ttggtgtcaaagctggtcaagcagatggcgaacgcctggaacgccgagagcgggtaccga 260 ||||||||||||||| ||| || || || |||||||| || ||||||| || || || Sbjct: 106039 ttggtgtcaaagctgctcagacatatcgcaaacgcctgaaatgccgagataggatagcgg 105980 Query: 261 tagtccatggtgaacatgtccttggtaaccttaccgaactgcaggatcac 310 || |||||||||||||||||||| ||| ||||| ||||| |||||||| Sbjct: 105979 taatccatggtgaacatgtccttcccaactttaccaaactggaggatcac 105930
>dbj|AK098851.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000H08, full insert sequence Length = 1630 Score = 79.8 bits (40), Expect = 9e-12 Identities = 103/124 (83%) Strand = Plus / Minus Query: 187 attcacacgccagcttggtgtcaaagctggtcaagcagatggcgaacgcctggaacgccg 246 ||||||| |||||||| ||| ||||||| || | ||||||||||||||||||||| || | Sbjct: 1295 attcacaggccagcttcgtgccaaagcttgtgaggcagatggcgaacgcctggaaggctg 1236 Query: 247 agagcgggtaccgatagtccatggtgaacatgtccttggtaaccttaccgaactgcagga 306 | ||||| | ||| |||||||| |||||| ||| | || ||||||||||||||||| Sbjct: 1235 acagcggctgccggtagtccatcgtgaacgcgtcgtcctcaatcttaccgaactgcagga 1176 Query: 307 tcac 310 |||| Sbjct: 1175 tcac 1172 Score = 69.9 bits (35), Expect = 9e-09 Identities = 68/79 (86%) Strand = Plus / Minus Query: 435 agctggaagttcttcacggaggccaccgtcacccggcctcggaagttgaggcaccagcac 494 ||||||||||||||||| ||||| || ||||||||||| |||| || | |||||||||| Sbjct: 1119 agctggaagttcttcaccgaggcgacggtcacccggccatggaaattcaagcaccagcac 1060 Query: 495 tgcagctgttcgtgccatc 513 ||||| || || ||||||| Sbjct: 1059 tgcagatgctcatgccatc 1041
>dbj|AK071159.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023078O15, full insert sequence Length = 1687 Score = 79.8 bits (40), Expect = 9e-12 Identities = 73/84 (86%) Strand = Plus / Minus Query: 434 cagctggaagttcttcacggaggccaccgtcacccggcctcggaagttgaggcaccagca 493 ||||||||||||||| || || || ||||| ||||| || ||||||| ||||||||||| Sbjct: 1241 cagctggaagttctttaccgatgcaaccgttacccgtccatggaagttaaggcaccagca 1182 Query: 494 ctgcagctgttcgtgccatctcgg 517 |||||| ||||||||||| ||||| Sbjct: 1181 ctgcagatgttcgtgccacctcgg 1158 Score = 60.0 bits (30), Expect = 8e-06 Identities = 90/110 (81%) Strand = Plus / Minus Query: 201 ttggtgtcaaagctggtcaagcagatggcgaacgcctggaacgccgagagcgggtaccga 260 ||||||||||||||| ||| || || || |||||||| || ||||||| || || || Sbjct: 1396 ttggtgtcaaagctgctcagacatatcgcaaacgcctgaaatgccgagataggatagcgg 1337 Query: 261 tagtccatggtgaacatgtccttggtaaccttaccgaactgcaggatcac 310 || |||||||||||||||||||| ||| ||||| ||||| |||||||| Sbjct: 1336 taatccatggtgaacatgtccttcccaactttaccaaactggaggatcac 1287
>dbj|AK061747.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-G02, full insert sequence Length = 1685 Score = 79.8 bits (40), Expect = 9e-12 Identities = 103/124 (83%) Strand = Plus / Minus Query: 187 attcacacgccagcttggtgtcaaagctggtcaagcagatggcgaacgcctggaacgccg 246 ||||||| |||||||| ||| ||||||| || | ||||||||||||||||||||| || | Sbjct: 1361 attcacaggccagcttcgtgccaaagcttgtgaggcagatggcgaacgcctggaaggctg 1302 Query: 247 agagcgggtaccgatagtccatggtgaacatgtccttggtaaccttaccgaactgcagga 306 | ||||| | ||| |||||||| |||||| ||| | || ||||||||||||||||| Sbjct: 1301 acagcggctgccggtagtccatcgtgaacgcgtcgtcctcaatcttaccgaactgcagga 1242 Query: 307 tcac 310 |||| Sbjct: 1241 tcac 1238 Score = 69.9 bits (35), Expect = 9e-09 Identities = 68/79 (86%) Strand = Plus / Minus Query: 435 agctggaagttcttcacggaggccaccgtcacccggcctcggaagttgaggcaccagcac 494 ||||||||||||||||| ||||| || ||||||||||| |||| || | |||||||||| Sbjct: 1185 agctggaagttcttcaccgaggcgacggtcacccggccatggaaattcaagcaccagcac 1126 Query: 495 tgcagctgttcgtgccatc 513 ||||| || || ||||||| Sbjct: 1125 tgcagatgctcatgccatc 1107
>dbj|AK060587.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B07, full insert sequence Length = 1948 Score = 79.8 bits (40), Expect = 9e-12 Identities = 73/84 (86%) Strand = Plus / Minus Query: 434 cagctggaagttcttcacggaggccaccgtcacccggcctcggaagttgaggcaccagca 493 ||||||||||||||| || || || ||||| ||||| || ||||||| ||||||||||| Sbjct: 1296 cagctggaagttctttaccgatgcaaccgttacccgtccatggaagttaaggcaccagca 1237 Query: 494 ctgcagctgttcgtgccatctcgg 517 |||||| ||||||||||| ||||| Sbjct: 1236 ctgcagatgttcgtgccacctcgg 1213 Score = 60.0 bits (30), Expect = 8e-06 Identities = 90/110 (81%) Strand = Plus / Minus Query: 201 ttggtgtcaaagctggtcaagcagatggcgaacgcctggaacgccgagagcgggtaccga 260 ||||||||||||||| ||| || || || |||||||| || ||||||| || || || Sbjct: 1451 ttggtgtcaaagctgctcagacatatcgcaaacgcctgaaatgccgagataggatagcgg 1392 Query: 261 tagtccatggtgaacatgtccttggtaaccttaccgaactgcaggatcac 310 || |||||||||||||||||||| ||| ||||| ||||| |||||||| Sbjct: 1391 taatccatggtgaacatgtccttcccaactttaccaaactggaggatcac 1342
>gb|AC120533.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0081F16 map E50055S, complete sequence Length = 148220 Score = 77.8 bits (39), Expect = 4e-11 Identities = 99/119 (83%) Strand = Plus / Minus Query: 195 gccagcttggtgtcaaagctggtcaagcagatggcgaacgcctggaacgccgagagcggg 254 |||||||||||||| || || ||| | |||| || || |||||||| || ||||||||| Sbjct: 87755 gccagcttggtgtcgaaactactcagggagatagcaaatgcctggaaggctgagagcggg 87696 Query: 255 taccgatagtccatggtgaacatgtccttggtaaccttaccgaactgcaggatcacctt 313 || | || |||||||||||||||||||||| |||||| ||||| ||||| || ||||| Sbjct: 87695 tagtggtaatccatggtgaacatgtccttggcaaccttcccgaattgcagtatgacctt 87637 Score = 63.9 bits (32), Expect = 5e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 435 agctggaagttcttcacggaggccaccgtcacccggcctcggaagttgaggcaccagcac 494 |||||||||||||| || || || || || |||||||| |||||||| | |||||||||| Sbjct: 87560 agctggaagttcttgacagaagcaacagttacccggccccggaagtttaagcaccagcac 87501 Query: 495 tgcagctgttcgtgccatct 514 || ||||| || |||||||| Sbjct: 87500 tgtagctgctcatgccatct 87481
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 77.8 bits (39), Expect = 4e-11 Identities = 99/119 (83%) Strand = Plus / Minus Query: 195 gccagcttggtgtcaaagctggtcaagcagatggcgaacgcctggaacgccgagagcggg 254 |||||||||||||| || || ||| | |||| || || |||||||| || ||||||||| Sbjct: 3082385 gccagcttggtgtcgaaactactcagggagatagcaaatgcctggaaggctgagagcggg 3082326 Query: 255 taccgatagtccatggtgaacatgtccttggtaaccttaccgaactgcaggatcacctt 313 || | || |||||||||||||||||||||| |||||| ||||| ||||| || ||||| Sbjct: 3082325 tagtggtaatccatggtgaacatgtccttggcaaccttcccgaattgcagtatgacctt 3082267 Score = 63.9 bits (32), Expect = 5e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 435 agctggaagttcttcacggaggccaccgtcacccggcctcggaagttgaggcaccagcac 494 |||||||||||||| || || || || || |||||||| |||||||| | |||||||||| Sbjct: 3082190 agctggaagttcttgacagaagcaacagttacccggccccggaagtttaagcaccagcac 3082131 Query: 495 tgcagctgttcgtgccatct 514 || ||||| || |||||||| Sbjct: 3082130 tgtagctgctcatgccatct 3082111
>dbj|AK070139.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023042K06, full insert sequence Length = 2073 Score = 77.8 bits (39), Expect = 4e-11 Identities = 99/119 (83%) Strand = Plus / Minus Query: 195 gccagcttggtgtcaaagctggtcaagcagatggcgaacgcctggaacgccgagagcggg 254 |||||||||||||| || || ||| | |||| || || |||||||| || ||||||||| Sbjct: 1740 gccagcttggtgtcgaaactactcagggagatagcaaatgcctggaaggctgagagcggg 1681 Query: 255 taccgatagtccatggtgaacatgtccttggtaaccttaccgaactgcaggatcacctt 313 || | || |||||||||||||||||||||| |||||| ||||| ||||| || ||||| Sbjct: 1680 tagtggtaatccatggtgaacatgtccttggcaaccttcccgaattgcagtatgacctt 1622 Score = 63.9 bits (32), Expect = 5e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 435 agctggaagttcttcacggaggccaccgtcacccggcctcggaagttgaggcaccagcac 494 |||||||||||||| || || || || || |||||||| |||||||| | |||||||||| Sbjct: 1545 agctggaagttcttgacagaagcaacagttacccggccccggaagtttaagcaccagcac 1486 Query: 495 tgcagctgttcgtgccatct 514 || ||||| || |||||||| Sbjct: 1485 tgtagctgctcatgccatct 1466
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 77.8 bits (39), Expect = 4e-11 Identities = 99/119 (83%) Strand = Plus / Minus Query: 195 gccagcttggtgtcaaagctggtcaagcagatggcgaacgcctggaacgccgagagcggg 254 |||||||||||||| || || ||| | |||| || || |||||||| || ||||||||| Sbjct: 3091416 gccagcttggtgtcgaaactactcagggagatagcaaatgcctggaaggctgagagcggg 3091357 Query: 255 taccgatagtccatggtgaacatgtccttggtaaccttaccgaactgcaggatcacctt 313 || | || |||||||||||||||||||||| |||||| ||||| ||||| || ||||| Sbjct: 3091356 tagtggtaatccatggtgaacatgtccttggcaaccttcccgaattgcagtatgacctt 3091298 Score = 63.9 bits (32), Expect = 5e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 435 agctggaagttcttcacggaggccaccgtcacccggcctcggaagttgaggcaccagcac 494 |||||||||||||| || || || || || |||||||| |||||||| | |||||||||| Sbjct: 3091221 agctggaagttcttgacagaagcaacagttacccggccccggaagtttaagcaccagcac 3091162 Query: 495 tgcagctgttcgtgccatct 514 || ||||| || |||||||| Sbjct: 3091161 tgtagctgctcatgccatct 3091142
>ref|NM_103621.2| Arabidopsis thaliana phosphoric diester hydrolase/ transcription factor AT1G47270 mRNA, complete cds Length = 1678 Score = 71.9 bits (36), Expect = 2e-09 Identities = 72/84 (85%) Strand = Plus / Minus Query: 435 agctggaagttcttcacggaggccaccgtcacccggcctcggaagttgaggcaccagcac 494 ||||||||||| ||||| ||||| || || || || ||| |||||| || ||||||||| Sbjct: 1327 agctggaagtttttcaccgaggcgactgtgactcgacctttgaagtttagacaccagcac 1268 Query: 495 tgcagctgttcgtgccatctcggc 518 || ||||||||||||||||||||| Sbjct: 1267 tgaagctgttcgtgccatctcggc 1244
>gb|AF487268.1| Arabidopsis thaliana tubby-like protein TULP6 (TULP6) mRNA, complete cds Length = 1167 Score = 71.9 bits (36), Expect = 2e-09 Identities = 72/84 (85%) Strand = Plus / Minus Query: 435 agctggaagttcttcacggaggccaccgtcacccggcctcggaagttgaggcaccagcac 494 ||||||||||| ||||| ||||| || || || || ||| |||||| || ||||||||| Sbjct: 980 agctggaagtttttcaccgaggcgactgtgactcgacctttgaagtttagacaccagcac 921 Query: 495 tgcagctgttcgtgccatctcggc 518 || ||||||||||||||||||||| Sbjct: 920 tgaagctgttcgtgccatctcggc 897
>gb|AC079677.4|AC079677 Arabidopsis thaliana chromosome 1 BAC F8G22 genomic sequence, complete sequence Length = 42801 Score = 71.9 bits (36), Expect = 2e-09 Identities = 72/84 (85%) Strand = Plus / Plus Query: 435 agctggaagttcttcacggaggccaccgtcacccggcctcggaagttgaggcaccagcac 494 ||||||||||| ||||| ||||| || || || || ||| |||||| || ||||||||| Sbjct: 1946 agctggaagtttttcaccgaggcgactgtgactcgacctttgaagtttagacaccagcac 2005 Query: 495 tgcagctgttcgtgccatctcggc 518 || ||||||||||||||||||||| Sbjct: 2006 tgaagctgttcgtgccatctcggc 2029
>ref|NM_202180.1| Arabidopsis thaliana phosphoric diester hydrolase/ transcription factor AT1G25280 transcript variant AT1G25280.2 mRNA, complete cds Length = 2049 Score = 69.9 bits (35), Expect = 9e-09 Identities = 77/91 (84%) Strand = Plus / Minus Query: 187 attcacacgccagcttggtgtcaaagctggtcaagcagatggcgaacgcctggaacgccg 246 ||||||| || |||||||||||||||||| | ||||| || || |||||||| ||||||| Sbjct: 1850 attcacaagcaagcttggtgtcaaagctgcttaagcatatcgcaaacgcctgaaacgccg 1791 Query: 247 agagcgggtaccgatagtccatggtgaacat 277 | | || |||| ||||||||| |||||||| Sbjct: 1790 ataatggatacctatagtccattgtgaacat 1760
>ref|NM_102338.2| Arabidopsis thaliana phosphoric diester hydrolase/ transcription factor AT1G25280 transcript variant AT1G25280.1 mRNA, complete cds Length = 2112 Score = 69.9 bits (35), Expect = 9e-09 Identities = 77/91 (84%) Strand = Plus / Minus Query: 187 attcacacgccagcttggtgtcaaagctggtcaagcagatggcgaacgcctggaacgccg 246 ||||||| || |||||||||||||||||| | ||||| || || |||||||| ||||||| Sbjct: 1913 attcacaagcaagcttggtgtcaaagctgcttaagcatatcgcaaacgcctgaaacgccg 1854 Query: 247 agagcgggtaccgatagtccatggtgaacat 277 | | || |||| ||||||||| |||||||| Sbjct: 1853 ataatggatacctatagtccattgtgaacat 1823
>ref|NM_001036481.1| Arabidopsis thaliana phosphoric diester hydrolase/ transcription factor AT2G47900 transcript variant AT2G47900.2 mRNA, complete cds Length = 1628 Score = 69.9 bits (35), Expect = 9e-09 Identities = 38/39 (97%) Strand = Plus / Minus Query: 476 gaagttgaggcaccagcactgcagctgttcgtgccatct 514 ||||||||||||||||||||| ||||||||||||||||| Sbjct: 1162 gaagttgaggcaccagcactggagctgttcgtgccatct 1124
>ref|NM_180150.1| Arabidopsis thaliana phosphoric diester hydrolase/ transcription factor AT2G47900 transcript variant AT2G47900.1 mRNA, complete cds Length = 1928 Score = 69.9 bits (35), Expect = 9e-09 Identities = 38/39 (97%) Strand = Plus / Minus Query: 476 gaagttgaggcaccagcactgcagctgttcgtgccatct 514 ||||||||||||||||||||| ||||||||||||||||| Sbjct: 1462 gaagttgaggcaccagcactggagctgttcgtgccatct 1424
>gb|AF487271.1| Arabidopsis thaliana tubby-like protein TULP10 (TULP10) mRNA, complete cds Length = 1338 Score = 69.9 bits (35), Expect = 9e-09 Identities = 77/91 (84%) Strand = Plus / Minus Query: 187 attcacacgccagcttggtgtcaaagctggtcaagcagatggcgaacgcctggaacgccg 246 ||||||| || |||||||||||||||||| | ||||| || || |||||||| ||||||| Sbjct: 1336 attcacaagcaagcttggtgtcaaagctgcttaagcatatcgcaaacgcctgaaacgccg 1277 Query: 247 agagcgggtaccgatagtccatggtgaacat 277 | | || |||| ||||||||| |||||||| Sbjct: 1276 ataatggatacctatagtccattgtgaacat 1246
>gb|AY045774.1| Arabidopsis thaliana tubby-like protein 3 mRNA, complete cds Length = 1221 Score = 69.9 bits (35), Expect = 9e-09 Identities = 38/39 (97%) Strand = Plus / Minus Query: 476 gaagttgaggcaccagcactgcagctgttcgtgccatct 514 ||||||||||||||||||||| ||||||||||||||||| Sbjct: 1008 gaagttgaggcaccagcactggagctgttcgtgccatct 970
>gb|AY096604.1| Arabidopsis thaliana putative tubby protein (At2g47900) mRNA, complete cds Length = 1252 Score = 69.9 bits (35), Expect = 9e-09 Identities = 38/39 (97%) Strand = Plus / Minus Query: 476 gaagttgaggcaccagcactgcagctgttcgtgccatct 514 ||||||||||||||||||||| ||||||||||||||||| Sbjct: 1008 gaagttgaggcaccagcactggagctgttcgtgccatct 970
>gb|AY074273.1| Arabidopsis thaliana putative tubby protein (At2g47900) mRNA, complete cds Length = 1943 Score = 69.9 bits (35), Expect = 9e-09 Identities = 38/39 (97%) Strand = Plus / Minus Query: 476 gaagttgaggcaccagcactgcagctgttcgtgccatct 514 ||||||||||||||||||||| ||||||||||||||||| Sbjct: 1462 gaagttgaggcaccagcactggagctgttcgtgccatct 1424
>gb|AC006072.4| Arabidopsis thaliana chromosome 2 clone T9J23 map CIC06C03, complete sequence Length = 81565 Score = 69.9 bits (35), Expect = 9e-09 Identities = 38/39 (97%) Strand = Plus / Plus Query: 476 gaagttgaggcaccagcactgcagctgttcgtgccatct 514 ||||||||||||||||||||| ||||||||||||||||| Sbjct: 14536 gaagttgaggcaccagcactggagctgttcgtgccatct 14574
>gb|AC005309.3| Arabidopsis thaliana chromosome 2 clone F17A22 map CIC06C03, complete sequence Length = 106355 Score = 69.9 bits (35), Expect = 9e-09 Identities = 38/39 (97%) Strand = Plus / Plus Query: 476 gaagttgaggcaccagcactgcagctgttcgtgccatct 514 ||||||||||||||||||||| ||||||||||||||||| Sbjct: 78845 gaagttgaggcaccagcactggagctgttcgtgccatct 78883
>gb|BT006290.1| Arabidopsis thaliana At1g25280 mRNA, complete cds Length = 804 Score = 69.9 bits (35), Expect = 9e-09 Identities = 77/91 (84%) Strand = Plus / Minus Query: 187 attcacacgccagcttggtgtcaaagctggtcaagcagatggcgaacgcctggaacgccg 246 ||||||| || |||||||||||||||||| | ||||| || || |||||||| ||||||| Sbjct: 802 attcacaagcaagcttggtgtcaaagctgcttaagcatatcgcaaacgcctgaaacgccg 743 Query: 247 agagcgggtaccgatagtccatggtgaacat 277 | | || |||| ||||||||| |||||||| Sbjct: 742 ataatggatacctatagtccattgtgaacat 712
>emb|BX813359.1|CNS0ABZ8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB12ZB05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1900 Score = 69.9 bits (35), Expect = 9e-09 Identities = 77/91 (84%) Strand = Plus / Minus Query: 187 attcacacgccagcttggtgtcaaagctggtcaagcagatggcgaacgcctggaacgccg 246 ||||||| || |||||||||||||||||| | ||||| || || |||||||| ||||||| Sbjct: 1755 attcacaagcaagcttggtgtcaaagctgcttaagcatatcgcaaacgcctgaaacgccg 1696 Query: 247 agagcgggtaccgatagtccatggtgaacat 277 | | || |||| ||||||||| |||||||| Sbjct: 1695 ataatggatacctatagtccattgtgaacat 1665
>gb|AC079374.4|AC079374 Arabidopsis thaliana chromosome 1 BAC F4F7 genomic sequence, complete sequence Length = 89690 Score = 69.9 bits (35), Expect = 9e-09 Identities = 77/91 (84%) Strand = Plus / Plus Query: 187 attcacacgccagcttggtgtcaaagctggtcaagcagatggcgaacgcctggaacgccg 246 ||||||| || |||||||||||||||||| | ||||| || || |||||||| ||||||| Sbjct: 40043 attcacaagcaagcttggtgtcaaagctgcttaagcatatcgcaaacgcctgaaacgccg 40102 Query: 247 agagcgggtaccgatagtccatggtgaacat 277 | | || |||| ||||||||| |||||||| Sbjct: 40103 ataatggatacctatagtccattgtgaacat 40133
>gb|BT001997.1| Arabidopsis thaliana unknown protein (At1g25280) mRNA, complete cds Length = 2019 Score = 69.9 bits (35), Expect = 9e-09 Identities = 77/91 (84%) Strand = Plus / Minus Query: 187 attcacacgccagcttggtgtcaaagctggtcaagcagatggcgaacgcctggaacgccg 246 ||||||| || |||||||||||||||||| | ||||| || || |||||||| ||||||| Sbjct: 1850 attcacaagcaagcttggtgtcaaagctgcttaagcatatcgcaaacgcctgaaacgccg 1791 Query: 247 agagcgggtaccgatagtccatggtgaacat 277 | | || |||| ||||||||| |||||||| Sbjct: 1790 ataatggatacctatagtccattgtgaacat 1760
>emb|AM260505.1| Platanus acerifolia partial mRNA for tubby protein (tub gene) Length = 941 Score = 69.9 bits (35), Expect = 9e-09 Identities = 65/75 (86%) Strand = Plus / Minus Query: 437 ctggaagttcttcacggaggccaccgtcacccggcctcggaagttgaggcaccagcactg 496 ||||||||||||||| || || || |||||||| || |||||||| |||||||||||||| Sbjct: 497 ctggaagttcttcaccgaagcaactgtcacccgtccacggaagttcaggcaccagcactg 438 Query: 497 cagctgttcgtgcca 511 ||||| || ||||| Sbjct: 437 gagctgctcatgcca 423 Score = 61.9 bits (31), Expect = 2e-06 Identities = 82/99 (82%) Strand = Plus / Minus Query: 185 tcattcacacgccagcttggtgtcaaagctggtcaagcagatggcgaacgcctggaacgc 244 ||||||||| || | |||||| ||||||||| | | |||||| ||||| |||||||| || Sbjct: 671 tcattcacaagcaatcttggtatcaaagctgctgaggcagatcgcgaatgcctggaatgc 612 Query: 245 cgagagcgggtaccgatagtccatggtgaacatgtcctt 283 ||||| || ||| | || ||||||||||||| |||||| Sbjct: 611 cgagattggatactggtaatccatggtgaacaagtcctt 573
>emb|BX814427.1|CNS0AC2Y Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB73ZC03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2022 Score = 61.9 bits (31), Expect = 2e-06 Identities = 76/91 (83%) Strand = Plus / Minus Query: 187 attcacacgccagcttggtgtcaaagctggtcaagcagatggcgaacgcctggaacgccg 246 ||||||| || |||||||||||||||||| | ||||| || || |||||||| |||||| Sbjct: 1918 attcacaagcaagcttggtgtcaaagctgcttaagcatatcgcaaacgcctgagacgccg 1859 Query: 247 agagcgggtaccgatagtccatggtgaacat 277 | | || |||| ||||||||| |||||||| Sbjct: 1858 ataatggatacctatagtccattgtgaacat 1828
>dbj|AB023895.1| Lemna paucicostata mRNA for tubby-like protein, complete cds Length = 1539 Score = 60.0 bits (30), Expect = 8e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 486 caccagcactgcagctgttcgtgccatctcggcacctt 523 ||||||||||| ||||||||||||||||||||| |||| Sbjct: 1217 caccagcactgaagctgttcgtgccatctcggcgcctt 1180
>gb|AC116573.7| Mus musculus BAC clone RP23-114E15 from chromosome 6, complete sequence Length = 211910 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 185 tcattcacacgccagcttggtgtcaaagctgg 216 ||||||||||||||||||| |||||||||||| Sbjct: 104076 tcattcacacgccagcttgctgtcaaagctgg 104107
>gb|BC060068.1| Mus musculus tubby-like protein 3, mRNA (cDNA clone MGC:64708 IMAGE:6419643), complete cds Length = 3332 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 185 tcattcacacgccagcttggtgtcaaagctgg 216 ||||||||||||||||||| |||||||||||| Sbjct: 1386 tcattcacacgccagcttgctgtcaaagctgg 1355
>dbj|AK200626.1| Mus musculus cDNA, clone:Y1G0135D21, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000001562, based on BLAT search Length = 204 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 185 tcattcacacgccagcttggtgtcaaagctgg 216 ||||||||||||||||||| |||||||||||| Sbjct: 94 tcattcacacgccagcttgctgtcaaagctgg 63
>gb|AF045582.1|AF045582 Mus musculus tubby like protein 3 (Tulp3) mRNA, complete cds Length = 1508 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 185 tcattcacacgccagcttggtgtcaaagctgg 216 ||||||||||||||||||| |||||||||||| Sbjct: 1409 tcattcacacgccagcttgctgtcaaagctgg 1378
>ref|NM_011657.1| Mus musculus tubby-like protein 3 (Tulp3), mRNA Length = 3325 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 185 tcattcacacgccagcttggtgtcaaagctgg 216 ||||||||||||||||||| |||||||||||| Sbjct: 1399 tcattcacacgccagcttgctgtcaaagctgg 1368
>dbj|AB016963.1| Mus musculus mRNA for tubby, complete cds Length = 3325 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 185 tcattcacacgccagcttggtgtcaaagctgg 216 ||||||||||||||||||| |||||||||||| Sbjct: 1399 tcattcacacgccagcttgctgtcaaagctgg 1368
>ref|NM_179644.1| Arabidopsis thaliana phosphoric diester hydrolase/ transcription factor AT2G18280 transcript variant AT2G18280.1 mRNA, complete cds Length = 1900 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 476 gaagttgaggcaccagcactgcagctgttcgtgccatct 514 ||||||||||||||||||||||| ||| || |||||||| Sbjct: 1408 gaagttgaggcaccagcactgcaactgctcatgccatct 1370
>ref|NM_001036292.1| Arabidopsis thaliana phosphoric diester hydrolase/ transcription factor AT2G18280 transcript variant AT2G18280.2 mRNA, complete cds Length = 1955 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 476 gaagttgaggcaccagcactgcagctgttcgtgccatct 514 ||||||||||||||||||||||| ||| || |||||||| Sbjct: 1441 gaagttgaggcaccagcactgcaactgctcatgccatct 1403
>gb|BT025314.1| Arabidopsis thaliana At2g18280 mRNA, complete cds Length = 1185 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 476 gaagttgaggcaccagcactgcagctgttcgtgccatct 514 ||||||||||||||||||||||| ||| || |||||||| Sbjct: 963 gaagttgaggcaccagcactgcaactgctcatgccatct 925
>gb|AY045773.1| Arabidopsis thaliana tubby-like protein 2 mRNA, complete cds Length = 1185 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 476 gaagttgaggcaccagcactgcagctgttcgtgccatct 514 ||||||||||||||||||||||| ||| || |||||||| Sbjct: 963 gaagttgaggcaccagcactgcaactgctcatgccatct 925
>gb|BT008627.1| Arabidopsis thaliana clone RAFL09-94-B05 (R19985) putative F-box containing tubby family protein (At2g18280) mRNA, complete cds Length = 1689 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 476 gaagttgaggcaccagcactgcagctgttcgtgccatct 514 ||||||||||||||||||||||| ||| || |||||||| Sbjct: 1334 gaagttgaggcaccagcactgcaactgctcatgccatct 1296
>gb|AC006439.4| Arabidopsis thaliana chromosome 2 clone T30D6 map mi39, complete sequence Length = 92861 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 476 gaagttgaggcaccagcactgcagctgttcgtgccatct 514 ||||||||||||||||||||||| ||| || |||||||| Sbjct: 67511 gaagttgaggcaccagcactgcaactgctcatgccatct 67549
>emb|BX819976.1|CNS0A8IA Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS56ZB04 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 790 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 476 gaagttgaggcaccagcactgcagctgttcgtgccatct 514 ||||||||||||||||||||||| ||| || |||||||| Sbjct: 318 gaagttgaggcaccagcactgcaactgctcatgccatct 280
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 434 cagctggaagttcttcacggaggccaccgtcacccggcctcggaagttgaggcaccagca 493 |||||| ||||| ||||| ||||| || || ||||| || ||||||||||||||||| || Sbjct: 13140395 cagctgaaagtttttcactgaggcaacagtaacccgtccacggaagttgaggcaccaaca 13140454 Query: 494 ctgcag 499 ||||| Sbjct: 13140455 ttgcag 13140460
>gb|AC135257.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1113A07, from chromosome 3, complete sequence Length = 151173 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Minus Query: 434 cagctggaagttcttcacggaggccaccgtcacccggcctcggaagttgaggcaccagca 493 |||||| ||||| ||||| ||||| || || ||||| || ||||||||||||||||| || Sbjct: 86243 cagctgaaagtttttcactgaggcaacagtaacccgtccacggaagttgaggcaccaaca 86184 Query: 494 ctgcag 499 ||||| Sbjct: 86183 ttgcag 86178
>gb|AC151598.2| Medicago truncatula chromosome 2 BAC clone mte1-49g8, complete sequence Length = 143328 Score = 52.0 bits (26), Expect = 0.002 Identities = 65/78 (83%) Strand = Plus / Minus Query: 434 cagctggaagttcttcacggaggccaccgtcacccggcctcggaagttgaggcaccagca 493 |||||| ||||||||||| || ||||| ||||| || || ||||||| | ||||||||| Sbjct: 128414 cagctgaaagttcttcacagatgccactgtcacacgaccatggaagttcaagcaccagca 128355 Query: 494 ctgcagctgttcgtgcca 511 ||||| || |||||||| Sbjct: 128354 ctgcaaatgctcgtgcca 128337
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 434 cagctggaagttcttcacggaggccaccgtcacccggcctcggaagttgaggcaccagca 493 |||||| ||||| ||||| ||||| || || ||||| || ||||||||||||||||| || Sbjct: 13137170 cagctgaaagtttttcactgaggcaacagtaacccgtccacggaagttgaggcaccaaca 13137229 Query: 494 ctgcag 499 ||||| Sbjct: 13137230 ttgcag 13137235
>dbj|AK102370.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033091L01, full insert sequence Length = 2102 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Minus Query: 434 cagctggaagttcttcacggaggccaccgtcacccggcctcggaagttgaggcaccagca 493 |||||| ||||| ||||| ||||| || || ||||| || ||||||||||||||||| || Sbjct: 723 cagctgaaagtttttcactgaggcaacagtaacccgtccacggaagttgaggcaccaaca 664 Query: 494 ctgcag 499 ||||| Sbjct: 663 ttgcag 658
>ref|NM_106341.2| Arabidopsis thaliana phosphoric diester hydrolase/ transcription factor AT1G76900 transcript variant AT1G76900.1 mRNA, complete cds Length = 1609 Score = 50.1 bits (25), Expect = 0.008 Identities = 64/77 (83%) Strand = Plus / Minus Query: 204 gtgtcaaagctggtcaagcagatggcgaacgcctggaacgccgagagcgggtaccgatag 263 ||||| || ||| |||| ||||| ||||| ||||| ||||| |||||||| ||||| | Sbjct: 1422 gtgtcgaaactgctcaaacagatagcgaaagcctgaaacgcagagagcggataccggaaa 1363 Query: 264 tccatggtgaacatgtc 280 ||||| ||||||||||| Sbjct: 1362 tccatcgtgaacatgtc 1346
>ref|NM_179563.1| Arabidopsis thaliana phosphoric diester hydrolase/ transcription factor AT1G76900 transcript variant AT1G76900.2 mRNA, complete cds Length = 1708 Score = 50.1 bits (25), Expect = 0.008 Identities = 64/77 (83%) Strand = Plus / Minus Query: 204 gtgtcaaagctggtcaagcagatggcgaacgcctggaacgccgagagcgggtaccgatag 263 ||||| || ||| |||| ||||| ||||| ||||| ||||| |||||||| ||||| | Sbjct: 1521 gtgtcgaaactgctcaaacagatagcgaaagcctgaaacgcagagagcggataccggaaa 1462 Query: 264 tccatggtgaacatgtc 280 ||||| ||||||||||| Sbjct: 1461 tccatcgtgaacatgtc 1445
>gb|AF487267.1| Arabidopsis thaliana tubby-like protein TULP1 (TULP1) mRNA, complete cds Length = 1368 Score = 50.1 bits (25), Expect = 0.008 Identities = 64/77 (83%) Strand = Plus / Minus Query: 204 gtgtcaaagctggtcaagcagatggcgaacgcctggaacgccgagagcgggtaccgatag 263 ||||| || ||| |||| ||||| ||||| ||||| ||||| |||||||| ||||| | Sbjct: 1349 gtgtcgaaactgctcaaacagatagcgaaagcctgaaacgcagagagcggataccggaaa 1290 Query: 264 tccatggtgaacatgtc 280 ||||| ||||||||||| Sbjct: 1289 tccatcgtgaacatgtc 1273
>gb|AC002291.1| Arabidopsis thaliana chromosome I BAC F22K20 genomic sequence, complete sequence Length = 96642 Score = 50.1 bits (25), Expect = 0.008 Identities = 64/77 (83%) Strand = Plus / Minus Query: 204 gtgtcaaagctggtcaagcagatggcgaacgcctggaacgccgagagcgggtaccgatag 263 ||||| || ||| |||| ||||| ||||| ||||| ||||| |||||||| ||||| | Sbjct: 3309 gtgtcgaaactgctcaaacagatagcgaaagcctgaaacgcagagagcggataccggaaa 3250 Query: 264 tccatggtgaacatgtc 280 ||||| ||||||||||| Sbjct: 3249 tccatcgtgaacatgtc 3233
>gb|AY139758.1| Arabidopsis thaliana At1g76900/F7O12_7 mRNA, complete cds Length = 1642 Score = 50.1 bits (25), Expect = 0.008 Identities = 64/77 (83%) Strand = Plus / Minus Query: 204 gtgtcaaagctggtcaagcagatggcgaacgcctggaacgccgagagcgggtaccgatag 263 ||||| || ||| |||| ||||| ||||| ||||| ||||| |||||||| ||||| | Sbjct: 1520 gtgtcgaaactgctcaaacagatagcgaaagcctgaaacgcagagagcggataccggaaa 1461 Query: 264 tccatggtgaacatgtc 280 ||||| ||||||||||| Sbjct: 1460 tccatcgtgaacatgtc 1444
>emb|BX814933.1|CNS0ADX5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS19ZH06 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1643 Score = 50.1 bits (25), Expect = 0.008 Identities = 64/77 (83%) Strand = Plus / Minus Query: 204 gtgtcaaagctggtcaagcagatggcgaacgcctggaacgccgagagcgggtaccgatag 263 ||||| || ||| |||| ||||| ||||| ||||| ||||| |||||||| ||||| | Sbjct: 1496 gtgtcgaaactgctcaaacagatagcgaaagcctgaaacgcagagagcggataccggaaa 1437 Query: 264 tccatggtgaacatgtc 280 ||||| ||||||||||| Sbjct: 1436 tccatcgtgaacatgtc 1420
>emb|BX813680.1|CNS0AAJU Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB32ZB03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1615 Score = 50.1 bits (25), Expect = 0.008 Identities = 64/77 (83%) Strand = Plus / Minus Query: 204 gtgtcaaagctggtcaagcagatggcgaacgcctggaacgccgagagcgggtaccgatag 263 ||||| || ||| |||| ||||| ||||| ||||| ||||| |||||||| ||||| | Sbjct: 1406 gtgtcgaaactgctcaaacagatagcgaaagcctgaaacgcagagagcggataccggaaa 1347 Query: 264 tccatggtgaacatgtc 280 ||||| ||||||||||| Sbjct: 1346 tccatcgtgaacatgtc 1330
>gb|AC079283.4|AC079283 Arabidopsis thaliana chromosome 1 BAC F7O12 genomic sequence, complete sequence Length = 39456 Score = 50.1 bits (25), Expect = 0.008 Identities = 64/77 (83%) Strand = Plus / Minus Query: 204 gtgtcaaagctggtcaagcagatggcgaacgcctggaacgccgagagcgggtaccgatag 263 ||||| || ||| |||| ||||| ||||| ||||| ||||| |||||||| ||||| | Sbjct: 37765 gtgtcgaaactgctcaaacagatagcgaaagcctgaaacgcagagagcggataccggaaa 37706 Query: 264 tccatggtgaacatgtc 280 ||||| ||||||||||| Sbjct: 37705 tccatcgtgaacatgtc 37689
>gb|BT003039.1| Arabidopsis thaliana At1g76900/F7O12_7 gene, complete cds Length = 1368 Score = 50.1 bits (25), Expect = 0.008 Identities = 64/77 (83%) Strand = Plus / Minus Query: 204 gtgtcaaagctggtcaagcagatggcgaacgcctggaacgccgagagcgggtaccgatag 263 ||||| || ||| |||| ||||| ||||| ||||| ||||| |||||||| ||||| | Sbjct: 1349 gtgtcgaaactgctcaaacagatagcgaaagcctgaaacgcagagagcggataccggaaa 1290 Query: 264 tccatggtgaacatgtc 280 ||||| ||||||||||| Sbjct: 1289 tccatcgtgaacatgtc 1273
>emb|CT485798.2| Medicago truncatula chromosome 5 clone mth2-24d7, COMPLETE SEQUENCE Length = 115553 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Minus Query: 483 aggcaccagcactgcagctgttcgtgccatct 514 ||||||||||| ||||||||||| |||||||| Sbjct: 76473 aggcaccagcattgcagctgttcatgccatct 76442
>dbj|AB037351.1| Nasutitermes princeps mitochondrial gene for 16S rRNA, partial sequence Length = 738 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 108 aaataagtaaatcaacaacagaaa 131 |||||||||||||||||||||||| Sbjct: 692 aaataagtaaatcaacaacagaaa 715
>gb|AY140473.1| Arabidopsis lyrata clone P1WB1-C01-KAR99-14 unknown protein gene, exons 1 through 4 and partial cds Length = 1678 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Minus Query: 231 aacgcctggaacgccgagagcgggtaccgatagtccatggtgaacat 277 ||||||||||||||||| | ||| |||| ||| ||||| |||||||| Sbjct: 1675 aacgcctggaacgccgataacggatacctataatccattgtgaacat 1629
>gb|AY140472.1| Arabidopsis lyrata clone P1WB1-C01-KAR99-11 unknown protein gene, exons 1 through 4 and partial cds Length = 1678 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Minus Query: 231 aacgcctggaacgccgagagcgggtaccgatagtccatggtgaacat 277 ||||||||||||||||| | ||| |||| ||| ||||| |||||||| Sbjct: 1675 aacgcctggaacgccgataacggatacctataatccattgtgaacat 1629
>gb|AY140471.1| Arabidopsis lyrata clone P1WB1-C01-KAR99-4 unknown protein gene, exons 1 through 4 and partial cds Length = 1678 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Minus Query: 231 aacgcctggaacgccgagagcgggtaccgatagtccatggtgaacat 277 ||||||||||||||||| | ||| |||| ||| ||||| |||||||| Sbjct: 1675 aacgcctggaacgccgataacggatacctataatccattgtgaacat 1629
>gb|AY140470.1| Arabidopsis lyrata clone P1WB1-C01-KAR99-3 unknown protein gene, exons 1 through 4 and partial cds Length = 1678 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Minus Query: 231 aacgcctggaacgccgagagcgggtaccgatagtccatggtgaacat 277 ||||||||||||||||| | ||| |||| ||| ||||| |||||||| Sbjct: 1675 aacgcctggaacgccgataacggatacctataatccattgtgaacat 1629
>gb|AF045583.1|AF045583 Homo sapiens tubby like protein 3 (TULP3) mRNA, complete cds Length = 1482 Score = 46.1 bits (23), Expect = 0.13 Identities = 44/51 (86%) Strand = Plus / Minus Query: 435 agctggaagttcttcacggaggccaccgtcacccggcctcggaagttgagg 485 ||||||||||||||||| || ||| || |||||||| |||||||||||| Sbjct: 1223 agctggaagttcttcacagacgcctgagtgacccggccacggaagttgagg 1173 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Minus Query: 185 tcattcacacgccagcttggtgtcaaagct 214 |||||||||||||||||| |||||||||| Sbjct: 1374 tcattcacacgccagcttactgtcaaagct 1345
>emb|AL928925.6| Mouse DNA sequence from clone RP23-405K7 on chromosome 2, complete sequence Length = 145382 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 528 cggaggaccaagggcctctcctt 550 ||||||||||||||||||||||| Sbjct: 97641 cggaggaccaagggcctctcctt 97619
>ref|XM_521835.1| PREDICTED: Pan troglodytes similar to tubby isoform a; tubby (mouse) homolog (LOC466436), mRNA Length = 1995 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 437 ctggaagttcttcacggaggcc 458 |||||||||||||||||||||| Sbjct: 1842 ctggaagttcttcacggaggcc 1821
>gb|BC106943.1| Homo sapiens cDNA clone IMAGE:40034298 Length = 143 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Plus Query: 185 tcattcacacgccagcttggtgtcaaagct 214 |||||||||||||||||| |||||||||| Sbjct: 66 tcattcacacgccagcttactgtcaaagct 95
>gb|AC113333.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1115_B06, complete sequence Length = 139139 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Minus Query: 221 gcagatggcgaacgcctggaacgccgagag 250 |||||||||||| ||||| ||||||||||| Sbjct: 39888 gcagatggcgaaagcctgaaacgccgagag 39859 Score = 40.1 bits (20), Expect = 7.8 Identities = 53/64 (82%) Strand = Plus / Minus Query: 435 agctggaagttcttcacggaggccaccgtcacccggcctcggaagttgaggcaccagcac 494 |||||||| ||||||||||| || || ||||| || || | ||||| | |||||||||| Sbjct: 39746 agctggaaattcttcacggatgcaactgtcactcgcccatgaaagtttaagcaccagcac 39687 Query: 495 tgca 498 |||| Sbjct: 39686 tgca 39683
>ref|NM_177972.1| Homo sapiens tubby homolog (mouse) (TUB), transcript variant 2, mRNA Length = 6172 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 437 ctggaagttcttcacggaggcc 458 |||||||||||||||||||||| Sbjct: 1517 ctggaagttcttcacggaggcc 1496
>ref|NM_003320.3| Homo sapiens tubby homolog (mouse) (TUB), transcript variant 1, mRNA Length = 6429 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 437 ctggaagttcttcacggaggcc 458 |||||||||||||||||||||| Sbjct: 1774 ctggaagttcttcacggaggcc 1753
>ref|NM_003324.3| Homo sapiens tubby like protein 3 (TULP3), mRNA Length = 2945 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Minus Query: 185 tcattcacacgccagcttggtgtcaaagct 214 |||||||||||||||||| |||||||||| Sbjct: 1410 tcattcacacgccagcttactgtcaaagct 1381 Score = 42.1 bits (21), Expect = 2.0 Identities = 42/49 (85%) Strand = Plus / Minus Query: 437 ctggaagttcttcacggaggccaccgtcacccggcctcggaagttgagg 485 ||||||||||||||| || ||| || |||||||| |||||||||||| Sbjct: 1257 ctggaagttcttcacagacgcctgagtgacccggccacggaagttgagg 1209
>ref|XM_542495.2| PREDICTED: Canis familiaris similar to tubby isoform a (LOC485377), mRNA Length = 1891 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 437 ctggaagttcttcacggaggcc 458 |||||||||||||||||||||| Sbjct: 1722 ctggaagttcttcacggaggcc 1701
>gb|AC005911.6| Homo sapiens 12 BAC RP11-372B4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 100701 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Plus Query: 185 tcattcacacgccagcttggtgtcaaagct 214 |||||||||||||||||| |||||||||| Sbjct: 37046 tcattcacacgccagcttactgtcaaagct 37075 Score = 42.1 bits (21), Expect = 2.0 Identities = 42/49 (85%) Strand = Plus / Plus Query: 437 ctggaagttcttcacggaggccaccgtcacccggcctcggaagttgagg 485 ||||||||||||||| || ||| || |||||||| |||||||||||| Sbjct: 38224 ctggaagttcttcacagacgcctgagtgacccggccacggaagttgagg 38272
>gb|AC121778.1| Mus musculus BAC clone RP23-359J6 from 1, complete sequence Length = 205069 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 528 cggaggaccaagggcctctcct 549 |||||||||||||||||||||| Sbjct: 21302 cggaggaccaagggcctctcct 21281
>gb|AC161594.3| Mus musculus BAC clone RP24-153G11 from chromosome 1, complete sequence Length = 180135 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 528 cggaggaccaagggcctctcct 549 |||||||||||||||||||||| Sbjct: 147495 cggaggaccaagggcctctcct 147474
>gb|AC129895.5| Homo sapiens chromosome 11, clone CTD-2634E19, complete sequence Length = 140077 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 437 ctggaagttcttcacggaggcc 458 |||||||||||||||||||||| Sbjct: 121163 ctggaagttcttcacggaggcc 121184
>emb|AJ277662.1|HSA277662 Homo sapiens partial TUB gene for tubby (mouse) homolog and LMO1 gene for LIM domain only 1 protein Length = 174986 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 437 ctggaagttcttcacggaggcc 458 |||||||||||||||||||||| Sbjct: 8487 ctggaagttcttcacggaggcc 8466
>dbj|AK024246.1| Homo sapiens cDNA FLJ14184 fis, clone NT2RP2005144, highly similar to Homo sapiens tubby like protein 3 (TULP3) mRNA Length = 2175 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Minus Query: 185 tcattcacacgccagcttggtgtcaaagct 214 |||||||||||||||||| |||||||||| Sbjct: 1410 tcattcacacgccagcttactgtcaaagct 1381 Score = 42.1 bits (21), Expect = 2.0 Identities = 42/49 (85%) Strand = Plus / Minus Query: 437 ctggaagttcttcacggaggccaccgtcacccggcctcggaagttgagg 485 ||||||||||||||| || ||| || |||||||| |||||||||||| Sbjct: 1257 ctggaagttcttcacagacgcctgagtgacccggccacggaagttgagg 1209
>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome Length = 2696255 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 349 aaggctggagctgctgttgctg 370 |||||||||||||||||||||| Sbjct: 2358108 aaggctggagctgctgttgctg 2358129
>gb|AC157653.2| Mus musculus BAC clone RP24-325H17 from chromosome 7, complete sequence Length = 168825 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Plus Query: 351 ggctggagctgctgttgctggggcggctgc 380 |||||||||||||| ||||||||| ||||| Sbjct: 8468 ggctggagctgctgctgctggggctgctgc 8497
>gb|AC010364.6| Homo sapiens chromosome 5 clone CTD-2042D5, complete sequence Length = 163400 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 101 aaggaataaataagtaaatcaa 122 |||||||||||||||||||||| Sbjct: 49855 aaggaataaataagtaaatcaa 49876
>gb|BC075031.2| Homo sapiens tubby homolog (mouse), transcript variant 1, mRNA (cDNA clone MGC:104164 IMAGE:30915625), complete cds Length = 1741 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 437 ctggaagttcttcacggaggcc 458 |||||||||||||||||||||| Sbjct: 1566 ctggaagttcttcacggaggcc 1545
>gb|BC075032.2| Homo sapiens tubby homolog (mouse), transcript variant 1, mRNA (cDNA clone MGC:104008 IMAGE:30915418), complete cds Length = 1741 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 437 ctggaagttcttcacggaggcc 458 |||||||||||||||||||||| Sbjct: 1566 ctggaagttcttcacggaggcc 1545
>gb|BC032587.1| Homo sapiens tubby like protein 3, mRNA (cDNA clone MGC:45295 IMAGE:5501868), complete cds Length = 2918 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Minus Query: 185 tcattcacacgccagcttggtgtcaaagct 214 |||||||||||||||||| |||||||||| Sbjct: 1383 tcattcacacgccagcttactgtcaaagct 1354 Score = 42.1 bits (21), Expect = 2.0 Identities = 42/49 (85%) Strand = Plus / Minus Query: 437 ctggaagttcttcacggaggccaccgtcacccggcctcggaagttgagg 485 ||||||||||||||| || ||| || |||||||| |||||||||||| Sbjct: 1230 ctggaagttcttcacagacgcctgagtgacccggccacggaagttgagg 1182
>emb|BX248246.11| Zebrafish DNA sequence from clone CH211-122H15 in linkage group 20, complete sequence Length = 176239 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 104 gaataaataagtaaatcaacaa 125 |||||||||||||||||||||| Sbjct: 159975 gaataaataagtaaatcaacaa 159996
>gb|AC006406.1|AC006406 Homo sapiens, clone hRPK.25_A_1, complete sequence Length = 159115 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 101 aaggaataaataagtaaatcaa 122 |||||||||||||||||||||| Sbjct: 112966 aaggaataaataagtaaatcaa 112945
>gb|AC150895.2| Mus musculus BAC clone RP24-274J5 from 7, complete sequence Length = 179893 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Plus Query: 351 ggctggagctgctgttgctggggcggctgc 380 |||||||||||||| ||||||||| ||||| Sbjct: 124956 ggctggagctgctgctgctggggctgctgc 124985
>gb|U82467.1|HSU82467 Human tub homolog (TUB) mRNA, complete cds Length = 3256 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 437 ctggaagttcttcacggaggcc 458 |||||||||||||||||||||| Sbjct: 1774 ctggaagttcttcacggaggcc 1753
>gb|U54644.1|HSU54644 Human tub homolog mRNA, complete cds Length = 2040 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 437 ctggaagttcttcacggaggcc 458 |||||||||||||||||||||| Sbjct: 1520 ctggaagttcttcacggaggcc 1499
>gb|AC116456.12| Homo sapiens chromosome 11, clone RP11-236J17, complete sequence Length = 146502 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 437 ctggaagttcttcacggaggcc 458 |||||||||||||||||||||| Sbjct: 128420 ctggaagttcttcacggaggcc 128399
>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome Length = 2695903 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 349 aaggctggagctgctgttgctg 370 |||||||||||||||||||||| Sbjct: 1958941 aaggctggagctgctgttgctg 1958920
>gb|AC163667.3| Mus musculus BAC clone RP23-53N20 from chromosome 13, complete sequence Length = 220804 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 531 aggaccaagggcctctccttg 551 ||||||||||||||||||||| Sbjct: 160477 aggaccaagggcctctccttg 160497
>ref|XM_516298.1| PREDICTED: Pan troglodytes similar to Hypothetical protein CBG16312 (LOC460193), mRNA Length = 866 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 352 gctggagctgctgttgctggggcggctgc 380 ||||||||||||| ||||||||| ||||| Sbjct: 753 gctggagctgctgctgctggggctgctgc 725
>gb|AC104911.10| Mus musculus chromosome 3, clone RP23-427B4, complete sequence Length = 190932 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 531 aggaccaagggcctctccttg 551 ||||||||||||||||||||| Sbjct: 72829 aggaccaagggcctctccttg 72809
>gb|AC150004.3| Mus musculus chromosome 7, clone RP24-368P9, complete sequence Length = 176113 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 530 gaggaccaagggcctctcctt 550 ||||||||||||||||||||| Sbjct: 134435 gaggaccaagggcctctcctt 134415
>gb|AC147554.2| Mus musculus BAC clone RP24-274B6 from chromosome 7, complete sequence Length = 154146 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 531 aggaccaagggcctctccttg 551 ||||||||||||||||||||| Sbjct: 116723 aggaccaagggcctctccttg 116743
>ref|NM_003322.2| Homo sapiens tubby like protein 1 (TULP1), mRNA Length = 2090 Score = 42.1 bits (21), Expect = 2.0 Identities = 42/49 (85%) Strand = Plus / Minus Query: 437 ctggaagttcttcacggaggccaccgtcacccggcctcggaagttgagg 485 |||||||||||| || |||||| || ||||||||| ||||||||||| Sbjct: 1486 ctggaagttcttgactgaggcctgggtgacccggccttggaagttgagg 1438
>gb|AC113176.8| Mus musculus chromosome 3, clone RP23-453A2, complete sequence Length = 217606 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 531 aggaccaagggcctctccttg 551 ||||||||||||||||||||| Sbjct: 131177 aggaccaagggcctctccttg 131157
>ref|NR_002223.1| Homo sapiens tetra-peptide repeat homeobox-like (TPRXL) on chromosome 3 Length = 2183 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 352 gctggagctgctgttgctggggcggctgc 380 ||||||||||||| ||||||||| ||||| Sbjct: 1004 gctggagctgctgctgctggggctgctgc 976
>gb|BC065261.1| Homo sapiens tubby like protein 1, mRNA (cDNA clone MGC:70753 IMAGE:6144003), complete cds Length = 1948 Score = 42.1 bits (21), Expect = 2.0 Identities = 42/49 (85%) Strand = Plus / Minus Query: 437 ctggaagttcttcacggaggccaccgtcacccggcctcggaagttgagg 485 |||||||||||| || |||||| || ||||||||| ||||||||||| Sbjct: 1329 ctggaagttcttgactgaggcctgggtgacccggccttggaagttgagg 1281
>gb|AC111085.11| Mus musculus chromosome 9, clone RP23-146C24, complete sequence Length = 220622 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 530 gaggaccaagggcctctcctt 550 ||||||||||||||||||||| Sbjct: 45435 gaggaccaagggcctctcctt 45415
>gb|AC125174.3| Mus musculus BAC clone RP24-544G11 from chromosome 16, complete sequence Length = 196646 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 531 aggaccaagggcctctccttg 551 ||||||||||||||||||||| Sbjct: 18630 aggaccaagggcctctccttg 18610 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 531 aggaccaagggcctctcctt 550 |||||||||||||||||||| Sbjct: 89938 aggaccaagggcctctcctt 89957
>gb|AC138605.1| Mus musculus BAC clone RP23-392L23 from chromosome 16, complete sequence Length = 172684 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 531 aggaccaagggcctctccttg 551 ||||||||||||||||||||| Sbjct: 147775 aggaccaagggcctctccttg 147755
>gb|AC131738.3| Mus musculus BAC clone RP23-94E15 from 16, complete sequence Length = 199386 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 530 gaggaccaagggcctctcctt 550 ||||||||||||||||||||| Sbjct: 130087 gaggaccaagggcctctcctt 130107
>gb|AC122805.4| Mus musculus BAC clone RP23-296O23 from 3, complete sequence Length = 202733 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 530 gaggaccaagggcctctcctt 550 ||||||||||||||||||||| Sbjct: 103788 gaggaccaagggcctctcctt 103768
>gb|AC116327.4| Mus musculus BAC clone RP24-68L14 from 7, complete sequence Length = 194290 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 531 aggaccaagggcctctccttg 551 ||||||||||||||||||||| Sbjct: 190369 aggaccaagggcctctccttg 190349
>gb|AC098707.2| Mus musculus BAC clone RP23-1I13 from 18, complete sequence Length = 230128 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 531 aggaccaagggcctctccttg 551 ||||||||||||||||||||| Sbjct: 156652 aggaccaagggcctctccttg 156672
>gb|BC032714.1| Homo sapiens tubby like protein 1, mRNA (cDNA clone MGC:45167 IMAGE:5495136), complete cds Length = 1976 Score = 42.1 bits (21), Expect = 2.0 Identities = 42/49 (85%) Strand = Plus / Minus Query: 437 ctggaagttcttcacggaggccaccgtcacccggcctcggaagttgagg 485 |||||||||||| || |||||| || ||||||||| ||||||||||| Sbjct: 1346 ctggaagttcttgactgaggcctgggtgacccggccttggaagttgagg 1298
>gb|AC102494.6| Mus musculus chromosome 7, clone RP24-565J5, complete sequence Length = 161721 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 531 aggaccaagggcctctccttg 551 ||||||||||||||||||||| Sbjct: 54991 aggaccaagggcctctccttg 55011
>gb|AC164971.2| Mus musculus BAC clone RP23-441D19 from chromosome 9, complete sequence Length = 213482 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 530 gaggaccaagggcctctcctt 550 ||||||||||||||||||||| Sbjct: 45720 gaggaccaagggcctctcctt 45740
>emb|AL033519.42|HS340B19 Human DNA sequence from clone RP3-340B19 on chromosome 6p21.2-21.3 Contains the TULP1 gene for tubby like protein 1, a novel gene, ribosomal protein S15A (RPS15A) and L36 (RPL36) pseudogenes, the 3' end of the FKBP5 gene for FK506 binding protein 5 (FKBP51) and two CpG islands, complete sequence Length = 178985 Score = 42.1 bits (21), Expect = 2.0 Identities = 42/49 (85%) Strand = Plus / Plus Query: 437 ctggaagttcttcacggaggccaccgtcacccggcctcggaagttgagg 485 |||||||||||| || |||||| || ||||||||| ||||||||||| Sbjct: 4037 ctggaagttcttgactgaggcctgggtgacccggccttggaagttgagg 4085
>gb|AC162611.2| Mus musculus chromosome 3, clone RP24-86E1, complete sequence Length = 229643 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 531 aggaccaagggcctctccttg 551 ||||||||||||||||||||| Sbjct: 53051 aggaccaagggcctctccttg 53071
>gb|AC159969.4| Mus musculus chromosome 3, clone RP23-301F20, complete sequence Length = 187487 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 531 aggaccaagggcctctccttg 551 ||||||||||||||||||||| Sbjct: 30036 aggaccaagggcctctccttg 30056
>gb|AC164106.3| Mus musculus BAC clone RP23-445D20 from chromosome 18, complete sequence Length = 195721 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 531 aggaccaagggcctctccttg 551 ||||||||||||||||||||| Sbjct: 185934 aggaccaagggcctctccttg 185914
>gb|AC163999.3| Mus musculus chromosome 15, clone RP24-387E19, complete sequence Length = 163830 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 531 aggaccaagggcctctccttg 551 ||||||||||||||||||||| Sbjct: 30393 aggaccaagggcctctccttg 30413
>gb|AC160401.8| Mus musculus 10 BAC RP23-244J10 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 169912 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 531 aggaccaagggcctctccttg 551 ||||||||||||||||||||| Sbjct: 7292 aggaccaagggcctctccttg 7272 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 530 gaggaccaagggcctctcct 549 |||||||||||||||||||| Sbjct: 124923 gaggaccaagggcctctcct 124942
>emb|AL645479.19| Mouse DNA sequence from clone RP23-396O3 on chromosome 11 Contains the Cpd gene for carboxypeptidase D and a CpG island, complete sequence Length = 102358 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 531 aggaccaagggcctctccttg 551 ||||||||||||||||||||| Sbjct: 4980 aggaccaagggcctctccttg 5000
>emb|AL607126.9| Mouse DNA sequence from clone RP23-206I16 on chromosome 11, complete sequence Length = 221930 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 530 gaggaccaagggcctctcctt 550 ||||||||||||||||||||| Sbjct: 214093 gaggaccaagggcctctcctt 214073
>emb|AL646050.7| Mouse DNA sequence from clone RP23-460G5 on chromosome 11 Contains a ribosomal protein L7 (Rpl7) pseudogene and a CpG island, complete sequence Length = 164018 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 531 aggaccaagggcctctccttg 551 ||||||||||||||||||||| Sbjct: 95584 aggaccaagggcctctccttg 95604
>gb|AC152422.15| Medicago truncatula clone mth2-48d4, complete sequence Length = 87210 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 216 gtcaagcagatggcgaacgcctggaacgccgagagcgggta 256 ||||||||||||||||| || ||||| || ||||| ||||| Sbjct: 75564 gtcaagcagatggcgaaggcttggaaggcagagagtgggta 75604
>emb|CR613670.1| full-length cDNA clone CS0DI041YM04 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1914 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 352 gctggagctgctgttgctggggcggctgc 380 ||||||||||||| ||||||||| ||||| Sbjct: 799 gctggagctgctgctgctggggctgctgc 771
>dbj|AK092426.1| Homo sapiens cDNA FLJ35107 fis, clone PLACE6006871, moderately similar to SUPPRESSOR PROTEIN SRP40 Length = 2183 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 352 gctggagctgctgttgctggggcggctgc 380 ||||||||||||| ||||||||| ||||| Sbjct: 1004 gctggagctgctgctgctggggctgctgc 976
>emb|CR598112.1| full-length cDNA clone CS0DK004YN08 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 1951 Score = 42.1 bits (21), Expect = 2.0 Identities = 42/49 (85%) Strand = Plus / Minus Query: 437 ctggaagttcttcacggaggccaccgtcacccggcctcggaagttgagg 485 ||||||||||||||| || ||| || |||||||| |||||||||||| Sbjct: 1217 ctggaagttcttcacagacgcctgagtgacccggccacggaagttgagg 1169
>dbj|AK171775.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830010H06 product:unclassifiable, full insert sequence Length = 1369 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 531 aggaccaagggcctctccttg 551 ||||||||||||||||||||| Sbjct: 478 aggaccaagggcctctccttg 458
>gb|AE016816.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome III, complete sequence Length = 907057 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 352 gctggagctgctgttgctggggcggctgc 380 |||||||||||||||||||| || ||||| Sbjct: 268909 gctggagctgctgttgctggagctgctgc 268881 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 352 gctggagctgctgttgctgg 371 |||||||||||||||||||| Sbjct: 268924 gctggagctgctgttgctgg 268905
>gb|AC158522.2| Mus musculus BAC clone RP23-400N21 from chromosome 14, complete sequence Length = 209322 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 531 aggaccaagggcctctccttg 551 ||||||||||||||||||||| Sbjct: 100188 aggaccaagggcctctccttg 100168
>gb|AC084213.19|AC084213 Mus musculus 1 BAC RP23-470F8 (Roswell Park Cancer Institute Mouse BAC Library) complete sequence Length = 109501 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 95 acactcaaggaataaataagtaaat 119 ||||| ||||||||||||||||||| Sbjct: 48594 acactaaaggaataaataagtaaat 48570
>gb|AC090886.1|AC090886 Homo sapiens chromosome 3 clone RP11-320K24 map 3p, complete sequence Length = 168778 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 352 gctggagctgctgttgctggggcggctgc 380 ||||||||||||| ||||||||| ||||| Sbjct: 142562 gctggagctgctgctgctggggctgctgc 142590
>gb|AC090645.1|AC090645 Homo sapiens chromosome 3 clone RP11-556G18 map 3p, complete sequence Length = 162869 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 352 gctggagctgctgttgctggggcggctgc 380 ||||||||||||| ||||||||| ||||| Sbjct: 27737 gctggagctgctgctgctggggctgctgc 27709
>gb|AC140379.3| Mus musculus BAC clone RP24-215M3 from chromosome 10, complete sequence Length = 141034 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 110 ataagtaaatcaacaacagaa 130 ||||||||||||||||||||| Sbjct: 9190 ataagtaaatcaacaacagaa 9210
>ref|XM_216034.3| PREDICTED: Rattus norvegicus CDKN1A interacting zinc finger protein 1 (predicted) (Ciz1_predicted), mRNA Length = 2971 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 352 gctggagctgctgttgctggggcggctgc 380 |||||||||||||||||||| || ||||| Sbjct: 547 gctggagctgctgttgctggagctgctgc 519
>gb|AC090004.2| Homo sapiens chromosome 3 clone RP11-14A10 map 3p, complete sequence Length = 169596 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 352 gctggagctgctgttgctggggcggctgc 380 ||||||||||||| ||||||||| ||||| Sbjct: 80005 gctggagctgctgctgctggggctgctgc 80033
>gb|AC121952.4| Mus musculus BAC clone RP24-217M18 from chromosome 8, complete sequence Length = 111845 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 531 aggaccaagggcctctccttg 551 ||||||||||||||||||||| Sbjct: 87733 aggaccaagggcctctccttg 87753
>gb|AF034922.1|HSTULP1S04 Homo sapiens tubby like protein 1 (TULP1) gene, exon 14 Length = 1518 Score = 42.1 bits (21), Expect = 2.0 Identities = 42/49 (85%) Strand = Plus / Minus Query: 437 ctggaagttcttcacggaggccaccgtcacccggcctcggaagttgagg 485 |||||||||||| || |||||| || ||||||||| ||||||||||| Sbjct: 903 ctggaagttcttgactgaggcctgggtgacccggccttggaagttgagg 855
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 351 ggctggagctgctgttgctggggcggctg 379 |||||| ||| |||||||||||||||||| Sbjct: 441289 ggctggcgctcctgttgctggggcggctg 441261
>gb|AC102606.12| Mus musculus chromosome 7, clone RP23-390N24, complete sequence Length = 188836 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 530 gaggaccaagggcctctcctt 550 ||||||||||||||||||||| Sbjct: 163417 gaggaccaagggcctctcctt 163437
>ref|XM_320575.2| Anopheles gambiae str. PEST ENSANGP00000015243 (ENSANGG00000012754), partial mRNA Length = 1344 Score = 42.1 bits (21), Expect = 2.0 Identities = 45/53 (84%) Strand = Plus / Minus Query: 228 gcgaacgcctggaacgccgagagcgggtaccgatagtccatggtgaacatgtc 280 ||||||||||||||||| | ||||| ||||| ||||||| ||||| ||||| Sbjct: 1301 gcgaacgcctggaacgcgcacagcggataccggaagtccatcgtgaagatgtc 1249
>ref|NM_208702.1| Eremothecium gossypii ACL055Wp (ACL055W), mRNA Length = 1416 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 352 gctggagctgctgttgctggggcggctgc 380 |||||||||||||||||||| || ||||| Sbjct: 985 gctggagctgctgttgctggagctgctgc 957 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 352 gctggagctgctgttgctgg 371 |||||||||||||||||||| Sbjct: 1000 gctggagctgctgttgctgg 981
>gb|AC102183.6| Mus musculus chromosome 15, clone RP24-146N2, complete sequence Length = 148288 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 531 aggaccaagggcctctccttg 551 ||||||||||||||||||||| Sbjct: 145715 aggaccaagggcctctccttg 145735
>gb|AC129557.10| Mus musculus chromosome 19, clone RP24-245F23, complete sequence Length = 174415 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 531 aggaccaagggcctctccttg 551 ||||||||||||||||||||| Sbjct: 85027 aggaccaagggcctctccttg 85007
>gb|AC153945.5| Mus musculus 10 BAC RP24-501G17 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 179734 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 531 aggaccaagggcctctccttg 551 ||||||||||||||||||||| Sbjct: 38849 aggaccaagggcctctccttg 38869
>gb|AC159264.3| Mus musculus BAC clone RP24-67G10 from chromosome 13, complete sequence Length = 164748 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 531 aggaccaagggcctctccttg 551 ||||||||||||||||||||| Sbjct: 66353 aggaccaagggcctctccttg 66373
>gb|AC138111.3| Mus musculus BAC clone RP24-262B6 from 1, complete sequence Length = 138380 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 95 acactcaaggaataaataagtaaat 119 ||||| ||||||||||||||||||| Sbjct: 106259 acactaaaggaataaataagtaaat 106283
>emb|AL807375.14| Mouse DNA sequence from clone RP23-247H23 on chromosome X, complete sequence Length = 143779 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 530 gaggaccaagggcctctcctt 550 ||||||||||||||||||||| Sbjct: 95635 gaggaccaagggcctctcctt 95655
>gb|U82468.1|HSU82468 Human tubby related protein 1 (TULP1) mRNA, complete cds Length = 2116 Score = 42.1 bits (21), Expect = 2.0 Identities = 42/49 (85%) Strand = Plus / Minus Query: 437 ctggaagttcttcacggaggccaccgtcacccggcctcggaagttgagg 485 |||||||||||| || |||||| || ||||||||| ||||||||||| Sbjct: 1512 ctggaagttcttgactgaggcctgggtgacccggccttggaagttgagg 1464
>gb|AC102628.5| Mus musculus chromosome 7, clone RP23-467K15, complete sequence Length = 178563 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 530 gaggaccaagggcctctcctt 550 ||||||||||||||||||||| Sbjct: 173025 gaggaccaagggcctctcctt 173005 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 530 gaggaccaagggcctctcctt 550 ||||||||||||||||||||| Sbjct: 53700 gaggaccaagggcctctcctt 53680 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 530 gaggaccaagggcctctcct 549 |||||||||||||||||||| Sbjct: 102738 gaggaccaagggcctctcct 102719
>emb|AL670951.6| Mouse DNA sequence from clone RP23-6N18 on chromosome 2, complete sequence Length = 207571 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 530 gaggaccaagggcctctcctt 550 ||||||||||||||||||||| Sbjct: 36368 gaggaccaagggcctctcctt 36388
>emb|AL731839.13| Mouse DNA sequence from clone RP23-76O22 on chromosome X, complete sequence Length = 228355 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 530 gaggaccaagggcctctcctt 550 ||||||||||||||||||||| Sbjct: 54121 gaggaccaagggcctctcctt 54101
>gb|AC099576.12| Mus musculus chromosome 3, clone RP23-93G15, complete sequence Length = 156835 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 531 aggaccaagggcctctcctt 550 |||||||||||||||||||| Sbjct: 81309 aggaccaagggcctctcctt 81290 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 531 aggaccaagggcctctcctt 550 |||||||||||||||||||| Sbjct: 61034 aggaccaagggcctctcctt 61053
>gb|AC102004.7| Mus musculus chromosome 15, clone RP24-489M6, complete sequence Length = 164810 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 531 aggaccaagggcctctcctt 550 |||||||||||||||||||| Sbjct: 110859 aggaccaagggcctctcctt 110878
>gb|AC117559.7| Mus musculus chromosome 5, clone RP24-170C14, complete sequence Length = 129660 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 531 aggaccaagggcctctcctt 550 |||||||||||||||||||| Sbjct: 13073 aggaccaagggcctctcctt 13092
>gb|AC101892.9| Mus musculus chromosome 3, clone RP23-472D12, complete sequence Length = 167102 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 531 aggaccaagggcctctcctt 550 |||||||||||||||||||| Sbjct: 63721 aggaccaagggcctctcctt 63740
>gb|AC153801.1| Mus musculus 10 NOVECTOR RP24-255E19 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 156755 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 531 aggaccaagggcctctcctt 550 |||||||||||||||||||| Sbjct: 134539 aggaccaagggcctctcctt 134520 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 531 aggaccaagggcctctcctt 550 |||||||||||||||||||| Sbjct: 55408 aggaccaagggcctctcctt 55389
>gb|AC118642.11| Mus musculus chromosome 18, clone RP24-112L21, complete sequence Length = 193995 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 531 aggaccaagggcctctcctt 550 |||||||||||||||||||| Sbjct: 114345 aggaccaagggcctctcctt 114364 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 531 aggaccaagggcctctcctt 550 |||||||||||||||||||| Sbjct: 18515 aggaccaagggcctctcctt 18534
>gb|AC153501.2| Mus musculus 10 BAC RP23-79J15 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 251631 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 531 aggaccaagggcctctcctt 550 |||||||||||||||||||| Sbjct: 233365 aggaccaagggcctctcctt 233384
>gb|AC161230.10| Mus musculus chromosome 1, clone RP24-160I3, complete sequence Length = 141358 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 531 aggaccaagggcctctcctt 550 |||||||||||||||||||| Sbjct: 89859 aggaccaagggcctctcctt 89878
>gb|AC152987.1| Mus musculus 6 BAC RP23-133N21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 196532 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 531 aggaccaagggcctctcctt 550 |||||||||||||||||||| Sbjct: 16813 aggaccaagggcctctcctt 16794
>ref|NM_104210.2| Arabidopsis thaliana phosphoric diester hydrolase/ transcription factor AT1G53320 mRNA, complete cds Length = 1425 Score = 40.1 bits (20), Expect = 7.8 Identities = 35/40 (87%) Strand = Plus / Minus Query: 475 ggaagttgaggcaccagcactgcagctgttcgtgccatct 514 ||||||| || ||||||||||||| || ||||||||||| Sbjct: 984 ggaagttcagacaccagcactgcaagtgctcgtgccatct 945
>gb|AC111034.11| Mus musculus chromosome 8, clone RP23-202K1, complete sequence Length = 200303 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 531 aggaccaagggcctctcctt 550 |||||||||||||||||||| Sbjct: 59614 aggaccaagggcctctcctt 59633
>gb|AC102914.9| Mus musculus chromosome 15, clone RP24-274M4, complete sequence Length = 185807 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 531 aggaccaagggcctctcctt 550 |||||||||||||||||||| Sbjct: 182383 aggaccaagggcctctcctt 182402
>gb|AC124099.5| Mus musculus chromosome 3, clone RP24-125L17, complete sequence Length = 168471 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 105 aataaataagtaaatcaacaacag 128 ||||||||||||||| |||||||| Sbjct: 106289 aataaataagtaaataaacaacag 106312
>gb|AC165972.4| Mus musculus BAC clone RP23-87D12 from chromosome 17, complete sequence Length = 199737 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 531 aggaccaagggcctctcctt 550 |||||||||||||||||||| Sbjct: 133445 aggaccaagggcctctcctt 133426
>gb|AC107832.13| Mus musculus chromosome 1, clone RP23-231B19, complete sequence Length = 190541 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 531 aggaccaagggcctctcctt 550 |||||||||||||||||||| Sbjct: 95528 aggaccaagggcctctcctt 95547
>gb|AC102749.10| Mus musculus chromosome 5, clone RP24-478I4, complete sequence Length = 173437 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 531 aggaccaagggcctctcctt 550 |||||||||||||||||||| Sbjct: 165636 aggaccaagggcctctcctt 165617 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 531 aggaccaagggcctctcctt 550 |||||||||||||||||||| Sbjct: 132093 aggaccaagggcctctcctt 132074
>gb|AC107690.10| Mus musculus chromosome 3, clone RP24-349N15, complete sequence Length = 166260 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 531 aggaccaagggcctctcctt 550 |||||||||||||||||||| Sbjct: 36011 aggaccaagggcctctcctt 36030
>gb|AC163680.2| Mus musculus BAC clone RP24-111M15 from chromosome 8, complete sequence Length = 207917 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 530 gaggaccaagggcctctcct 549 |||||||||||||||||||| Sbjct: 31038 gaggaccaagggcctctcct 31057
>gb|AC131085.16| Mus musculus chromosome 13, clone RP23-452D10, complete sequence Length = 168579 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 531 aggaccaagggcctctcctt 550 |||||||||||||||||||| Sbjct: 57515 aggaccaagggcctctcctt 57496
>gb|AC101854.8| Mus musculus chromosome 1, clone RP23-298H18, complete sequence Length = 190474 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 531 aggaccaagggcctctcctt 550 |||||||||||||||||||| Sbjct: 11562 aggaccaagggcctctcctt 11581
>gb|AC161194.14| Mus musculus chromosome 15, clone RP23-345C13, complete sequence Length = 193998 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 531 aggaccaagggcctctcctt 550 |||||||||||||||||||| Sbjct: 20911 aggaccaagggcctctcctt 20930
>gb|AC165418.6| Mus musculus chromosome 7, clone RP23-148M16, complete sequence Length = 205525 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 530 gaggaccaagggcctctcct 549 |||||||||||||||||||| Sbjct: 167641 gaggaccaagggcctctcct 167660
>gb|AC102717.11| Mus musculus chromosome 5, clone RP24-576B5, complete sequence Length = 161299 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 531 aggaccaagggcctctcctt 550 |||||||||||||||||||| Sbjct: 138118 aggaccaagggcctctcctt 138137
>gb|AC121879.3| Mus musculus chromosome 19 clone RP24-132B24, complete sequence Length = 134662 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 531 aggaccaagggcctctcctt 550 |||||||||||||||||||| Sbjct: 88909 aggaccaagggcctctcctt 88890
>gb|AC104203.11| Mus musculus chromosome 5, clone RP24-301M6, complete sequence Length = 174779 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 531 aggaccaagggcctctcctt 550 |||||||||||||||||||| Sbjct: 155350 aggaccaagggcctctcctt 155369
>gb|AC113041.9| Mus musculus chromosome 8, clone RP23-240K12, complete sequence Length = 175827 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 530 gaggaccaagggcctctcct 549 |||||||||||||||||||| Sbjct: 98254 gaggaccaagggcctctcct 98235
>gb|AC101684.13| Mus musculus chromosome 1, clone RP23-187I13, complete sequence Length = 227440 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 417 tgtggcatggctgctgtcag 436 |||||||||||||||||||| Sbjct: 11572 tgtggcatggctgctgtcag 11553
>gb|AC135720.8| Mus musculus chromosome 15, clone RP24-298F20, complete sequence Length = 156107 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 531 aggaccaagggcctctcctt 550 |||||||||||||||||||| Sbjct: 132392 aggaccaagggcctctcctt 132373
>gb|AC169038.4| Mus musculus BAC clone RP23-31H24 from chromosome 14, complete sequence Length = 214689 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 530 gaggaccaagggcctctcct 549 |||||||||||||||||||| Sbjct: 195723 gaggaccaagggcctctcct 195742
>gb|AC154301.2| Mus musculus BAC clone RP23-392P5 from chromosome 14, complete sequence Length = 207510 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 531 aggaccaagggcctctcctt 550 |||||||||||||||||||| Sbjct: 100547 aggaccaagggcctctcctt 100528
>gb|AC154400.2| Mus musculus BAC clone RP23-163P4 from chromosome 16, complete sequence Length = 180951 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 530 gaggaccaagggcctctcct 549 |||||||||||||||||||| Sbjct: 161699 gaggaccaagggcctctcct 161680
>gb|AC170187.2| Mus musculus BAC clone RP23-320B10 from chromosome 19, complete sequence Length = 192550 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 531 aggaccaagggcctctcctt 550 |||||||||||||||||||| Sbjct: 78915 aggaccaagggcctctcctt 78934
>gb|AC167972.3| Mus musculus BAC clone RP24-73H24 from chromosome 13, complete sequence Length = 224330 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 531 aggaccaagggcctctcctt 550 |||||||||||||||||||| Sbjct: 65032 aggaccaagggcctctcctt 65013
>gb|AC165149.5| Mus musculus BAC clone RP24-114C10 from chromosome 13, complete sequence Length = 191162 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 531 aggaccaagggcctctcctt 550 |||||||||||||||||||| Sbjct: 131499 aggaccaagggcctctcctt 131518
>gb|AC166830.3| Mus musculus BAC clone RP23-246O1 from chromosome 13, complete sequence Length = 213487 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 531 aggaccaagggcctctcctt 550 |||||||||||||||||||| Sbjct: 60300 aggaccaagggcctctcctt 60319
>gb|AC166169.2| Mus musculus BAC clone RP23-193F7 from chromosome 14, complete sequence Length = 235897 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 531 aggaccaagggcctctcctt 550 |||||||||||||||||||| Sbjct: 201213 aggaccaagggcctctcctt 201194
>gb|AC131337.16| Mus musculus chromosome 15, clone RP23-480E1, complete sequence Length = 190303 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 531 aggaccaagggcctctcctt 550 |||||||||||||||||||| Sbjct: 112055 aggaccaagggcctctcctt 112074
>gb|AC166972.8| Mus musculus chromosome 3, clone RP24-330F18, complete sequence Length = 142975 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 531 aggaccaagggcctctcctt 550 |||||||||||||||||||| Sbjct: 7222 aggaccaagggcctctcctt 7241
>gb|AC110509.21| Mus musculus chromosome 8, clone RP24-423G4, complete sequence Length = 190160 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 531 aggaccaagggcctctcctt 550 |||||||||||||||||||| Sbjct: 159458 aggaccaagggcctctcctt 159477
>gb|AC113005.10| Mus musculus chromosome 3, clone RP23-299B23, complete sequence Length = 218917 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 531 aggaccaagggcctctcctt 550 |||||||||||||||||||| Sbjct: 79240 aggaccaagggcctctcctt 79259 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 531 aggaccaagggcctctcctt 550 |||||||||||||||||||| Sbjct: 2603 aggaccaagggcctctcctt 2622
>gb|AC157569.12| Mus musculus chromosome 3, clone RP23-434M21, complete sequence Length = 205286 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 531 aggaccaagggcctctcctt 550 |||||||||||||||||||| Sbjct: 54570 aggaccaagggcctctcctt 54551
>gb|AC166646.4| Mus musculus chromosome 3, clone RP24-400P18, complete sequence Length = 176864 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 531 aggaccaagggcctctcctt 550 |||||||||||||||||||| Sbjct: 93477 aggaccaagggcctctcctt 93496
>gb|AC125267.18| Mus musculus chromosome 10, clone RP24-483E18, complete sequence Length = 203922 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 531 aggaccaagggcctctcctt 550 |||||||||||||||||||| Sbjct: 140083 aggaccaagggcctctcctt 140064
>gb|AC168273.3| Mus musculus BAC RP23-184H4 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 202998 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 531 aggaccaagggcctctcctt 550 |||||||||||||||||||| Sbjct: 105347 aggaccaagggcctctcctt 105366
>gb|AC103646.6| Mus musculus chromosome 3, clone RP24-549G23, complete sequence Length = 130631 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 531 aggaccaagggcctctcctt 550 |||||||||||||||||||| Sbjct: 99438 aggaccaagggcctctcctt 99457
>gb|AC158901.5| Mus musculus chromosome 15, clone RP23-77K13, complete sequence Length = 192643 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 531 aggaccaagggcctctcctt 550 |||||||||||||||||||| Sbjct: 141954 aggaccaagggcctctcctt 141935
>gb|AC161108.2| Mus musculus chromosome 1, clone RP23-224G12, complete sequence Length = 207067 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 531 aggaccaagggcctctcctt 550 |||||||||||||||||||| Sbjct: 67320 aggaccaagggcctctcctt 67301
>gb|AC161496.6| Mus musculus chromosome 3, clone RP23-119A9, complete sequence Length = 203655 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 531 aggaccaagggcctctcctt 550 |||||||||||||||||||| Sbjct: 110893 aggaccaagggcctctcctt 110874 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 531 aggaccaagggcctctcctt 550 |||||||||||||||||||| Sbjct: 34260 aggaccaagggcctctcctt 34241
>gb|AC164419.3| Mus musculus chromosome 5, clone RP23-309G12, complete sequence Length = 159565 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 531 aggaccaagggcctctcctt 550 |||||||||||||||||||| Sbjct: 149937 aggaccaagggcctctcctt 149956
>gb|AC108853.7| Mus musculus chromosome 8, clone RP24-87L12, complete sequence Length = 171410 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 531 aggaccaagggcctctcctt 550 |||||||||||||||||||| Sbjct: 92246 aggaccaagggcctctcctt 92265
>gb|AC121095.16| Mus musculus chromosome 14, clone RP24-324H17, complete sequence Length = 142953 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 531 aggaccaagggcctctcctt 550 |||||||||||||||||||| Sbjct: 76006 aggaccaagggcctctcctt 75987
>gb|AC115932.11| Mus musculus chromosome 1, clone RP24-538F21, complete sequence Length = 205378 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 531 aggaccaagggcctctcctt 550 |||||||||||||||||||| Sbjct: 61142 aggaccaagggcctctcctt 61161
>gb|AC113448.14| Mus musculus chromosome 15, clone RP23-1N23, complete sequence Length = 216103 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 531 aggaccaagggcctctcctt 550 |||||||||||||||||||| Sbjct: 122650 aggaccaagggcctctcctt 122631
>gb|AC154908.4| Mus musculus BAC clone RP23-315C11 from chromosome 12, complete sequence Length = 169650 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 530 gaggaccaagggcctctcct 549 |||||||||||||||||||| Sbjct: 39297 gaggaccaagggcctctcct 39316
>gb|AC113039.10| Mus musculus chromosome 1, clone RP23-229P20, complete sequence Length = 172732 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 531 aggaccaagggcctctcctt 550 |||||||||||||||||||| Sbjct: 131125 aggaccaagggcctctcctt 131144
>gb|AC164619.5| Mus musculus BAC clone RP23-82L19 from chromosome 18, complete sequence Length = 216368 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 531 aggaccaagggcctctcctt 550 |||||||||||||||||||| Sbjct: 116800 aggaccaagggcctctcctt 116781
>gb|AC165357.4| Mus musculus BAC clone RP23-114G24 from chromosome 10, complete sequence Length = 216816 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 530 gaggaccaagggcctctcct 549 |||||||||||||||||||| Sbjct: 165457 gaggaccaagggcctctcct 165438
>gb|AC156163.2| Mus musculus BAC clone RP24-122E11 from chromosome 9, complete sequence Length = 141660 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 531 aggaccaagggcctctcctt 550 |||||||||||||||||||| Sbjct: 105096 aggaccaagggcctctcctt 105115 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,121,590 Number of Sequences: 3902068 Number of extensions: 5121590 Number of successful extensions: 165186 Number of sequences better than 10.0: 878 Number of HSP's better than 10.0 without gapping: 878 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 161093 Number of HSP's gapped (non-prelim): 4084 length of query: 577 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 554 effective length of database: 17,143,297,704 effective search space: 9497386928016 effective search space used: 9497386928016 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)