ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd22f08 |
|---|---|
| Clone Library Name | barley_pub |
>BRE1B_MOUSE (Q3U319) Ubiquitin-protein ligase BRE1B (EC 6.3.2.-) (BRE1-B) (RING| finger protein 40) Length = 1001 Score = 74.7 bits (182), Expect = 2e-13 Identities = 33/66 (50%), Positives = 41/66 (62%) Frame = -2 Query: 537 LQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGCGTPFGQND 358 LQ+EIK+ KA L C C R K+ V+TKCFH+FC C++ E R RKCP C FG +D Sbjct: 935 LQEEIKEYKARLTCPCCNTRKKDAVLTKCFHVFCFECVRGRYEARQRKCPKCNAAFGAHD 994 Query: 357 VREVKI 340 V I Sbjct: 995 FHRVYI 1000
>BRE1B_RAT (Q8CJB9) Ubiquitin-protein ligase BRE1B (EC 6.3.2.-) (BRE1-B) (RING| finger protein 40) (Syntaxin-1-interacting RING finger protein) (Protein staring) Length = 1002 Score = 74.7 bits (182), Expect = 2e-13 Identities = 33/66 (50%), Positives = 41/66 (62%) Frame = -2 Query: 537 LQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGCGTPFGQND 358 LQ+EIK+ KA L C C R K+ V+TKCFH+FC C++ E R RKCP C FG +D Sbjct: 936 LQEEIKEYKARLTCPCCNTRKKDAVLTKCFHVFCFECVRGRYEARQRKCPKCNAAFGAHD 995 Query: 357 VREVKI 340 V I Sbjct: 996 FHRVYI 1001
>BRE1A_CHICK (Q5ZLS3) Ubiquitin-protein ligase BRE1A (EC 6.3.2.-) (BRE1-A) (RING| finger protein 20) Length = 984 Score = 74.3 bits (181), Expect = 3e-13 Identities = 32/66 (48%), Positives = 40/66 (60%) Frame = -2 Query: 537 LQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGCGTPFGQND 358 L +EIKD KA L C C R K+ V+TKCFH+FC C++ + R RKCP C FG ND Sbjct: 918 LMEEIKDYKARLTCPCCNMRKKDAVLTKCFHVFCFECVKTRYDTRQRKCPKCNAAFGAND 977 Query: 357 VREVKI 340 + I Sbjct: 978 FHRIYI 983
>BRE1A_MOUSE (Q5DTM8) Ubiquitin-protein ligase BRE1A (EC 6.3.2.-) (BRE1-A) (RING| finger protein 20) Length = 973 Score = 74.3 bits (181), Expect = 3e-13 Identities = 32/66 (48%), Positives = 40/66 (60%) Frame = -2 Query: 537 LQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGCGTPFGQND 358 L +EIKD KA L C C R K+ V+TKCFH+FC C++ + R RKCP C FG ND Sbjct: 907 LMEEIKDYKARLTCPCCNMRKKDAVLTKCFHVFCFECVKTRYDTRQRKCPKCNAAFGAND 966 Query: 357 VREVKI 340 + I Sbjct: 967 FHRIYI 972
>BRE1B_PONPY (Q5RAU7) Ubiquitin-protein ligase BRE1B (EC 6.3.2.-) (BRE1-B) (RING| finger protein 40) Length = 1001 Score = 74.3 bits (181), Expect = 3e-13 Identities = 32/66 (48%), Positives = 41/66 (62%) Frame = -2 Query: 537 LQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGCGTPFGQND 358 LQ+EIK+ KA L C C R K+ V+TKCFH+FC C++ E R RKCP C FG +D Sbjct: 935 LQEEIKEYKARLTCPCCNTRKKDAVLTKCFHVFCFECVRGRYEARQRKCPKCNAAFGAHD 994 Query: 357 VREVKI 340 + I Sbjct: 995 FHRIYI 1000
>BRE1B_MACFA (Q4R7K7) Ubiquitin-protein ligase BRE1B (EC 6.3.2.-) (BRE1-B) (RING| finger protein 40) Length = 1001 Score = 74.3 bits (181), Expect = 3e-13 Identities = 32/66 (48%), Positives = 41/66 (62%) Frame = -2 Query: 537 LQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGCGTPFGQND 358 LQ+EIK+ KA L C C R K+ V+TKCFH+FC C++ E R RKCP C FG +D Sbjct: 935 LQEEIKEYKARLTCPCCNTRKKDAVLTKCFHVFCFECVRGRYEARQRKCPKCNAAFGAHD 994 Query: 357 VREVKI 340 + I Sbjct: 995 FHRIYI 1000
>BRE1B_HUMAN (O75150) Ubiquitin-protein ligase BRE1B (EC 6.3.2.-) (BRE1-B) (RING| finger protein 40) (95 kDa retinoblastoma-associated protein) (RBP95) Length = 1001 Score = 74.3 bits (181), Expect = 3e-13 Identities = 32/66 (48%), Positives = 41/66 (62%) Frame = -2 Query: 537 LQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGCGTPFGQND 358 LQ+EIK+ KA L C C R K+ V+TKCFH+FC C++ E R RKCP C FG +D Sbjct: 935 LQEEIKEYKARLTCPCCNTRKKDAVLTKCFHVFCFECVRGRYEARQRKCPKCNAAFGAHD 994 Query: 357 VREVKI 340 + I Sbjct: 995 FHRIYI 1000
>BRE1A_HUMAN (Q5VTR2) Ubiquitin-protein ligase BRE1A (EC 6.3.2.-) (BRE1-A) (RING| finger protein 20) Length = 975 Score = 74.3 bits (181), Expect = 3e-13 Identities = 32/66 (48%), Positives = 40/66 (60%) Frame = -2 Query: 537 LQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGCGTPFGQND 358 L +EIKD KA L C C R K+ V+TKCFH+FC C++ + R RKCP C FG ND Sbjct: 909 LMEEIKDYKARLTCPCCNMRKKDAVLTKCFHVFCFECVKTRYDTRQRKCPKCNAAFGAND 968 Query: 357 VREVKI 340 + I Sbjct: 969 FHRIYI 974
>BRE1_CAEBR (Q60YN5) Ubiquitin-protein ligase bre-1 (EC 6.3.2.-) (RING finger| protein rfp-1) Length = 828 Score = 70.5 bits (171), Expect = 5e-12 Identities = 30/68 (44%), Positives = 40/68 (58%) Frame = -2 Query: 543 QKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGCGTPFGQ 364 Q LQ+ + K L C C RPK+ ++ KC+HLFC TCI+ + R RKCP C + FG Sbjct: 761 QVLQEANRQMKETLTCPSCKTRPKDCIMLKCYHLFCETCIKTMYDTRQRKCPKCNSNFGA 820 Query: 363 NDVREVKI 340 ND + I Sbjct: 821 NDFHRIFI 828
>BRE1_CAEEL (P34537) Ubiquitin-protein ligase bre-1 (EC 6.3.2.-) (RING finger| protein rfp-1) Length = 837 Score = 69.3 bits (168), Expect = 1e-11 Identities = 29/68 (42%), Positives = 40/68 (58%) Frame = -2 Query: 543 QKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGCGTPFGQ 364 Q L++ + K L C C RPK+ ++ KC+HLFC TCI+ + R RKCP C + FG Sbjct: 770 QVLEEANRQMKETLTCPSCKTRPKDCIMLKCYHLFCETCIKTMYDTRQRKCPKCNSNFGA 829 Query: 363 NDVREVKI 340 ND + I Sbjct: 830 NDFHRIFI 837
>BRE1_SCHPO (O74563) Ubiquitin-protein ligase bre1 (EC 6.3.2.-)| Length = 680 Score = 65.5 bits (158), Expect = 1e-10 Identities = 34/79 (43%), Positives = 47/79 (59%), Gaps = 9/79 (11%) Frame = -2 Query: 564 ENEEATIQKLQD--------EIKDCKAILKCGVC-FDRPKEVVITKCFHLFCSTCIQRNL 412 E E +KL+D E+K +A+ KC VC F+R K+ +I+ C H FC CIQ+ + Sbjct: 597 EEHEKEKRKLKDTGVSTSAEELKTFRAMCKCSVCNFERWKDRIISLCGHGFCYQCIQKRI 656 Query: 411 ELRHRKCPGCGTPFGQNDV 355 E R R+CP CG FG +DV Sbjct: 657 ETRQRRCPICGRGFGASDV 675
>BRE1_DROME (Q9VRP9) Ubiquitin-protein ligase Bre1 (EC 6.3.2.-) (dBre1)| Length = 1044 Score = 64.3 bits (155), Expect = 3e-10 Identities = 26/58 (44%), Positives = 36/58 (62%) Frame = -2 Query: 531 DEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGCGTPFGQND 358 +EI++ K L C C + K+ V++KCFH+FC C++ E R RKCP C FG ND Sbjct: 980 EEIREYKETLTCPSCKVKRKDAVLSKCFHVFCYDCLRTRYETRQRKCPKCNCAFGAND 1037
>BRE1_CANAL (Q5A4X0) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)| Length = 681 Score = 63.5 bits (153), Expect = 6e-10 Identities = 26/76 (34%), Positives = 42/76 (55%) Frame = -2 Query: 567 SENEEATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCP 388 + N + +Q+ + +++ ++I KC VC K+ IT C H+FCS C Q L R R+CP Sbjct: 606 TNNTNSLLQEDEQQLEALRSIAKCSVCSKNWKDTAITVCGHVFCSKCTQERLAARLRRCP 665 Query: 387 GCGTPFGQNDVREVKI 340 C F ND+ + + Sbjct: 666 SCNRGFSANDLLSIHL 681
>BRE1_YARLI (Q6CF78) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)| Length = 700 Score = 63.5 bits (153), Expect = 6e-10 Identities = 28/77 (36%), Positives = 41/77 (53%) Frame = -2 Query: 570 TSENEEATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKC 391 T + E ++ DEI + ++I C +C K+ + C H+FC C Q L+ R RKC Sbjct: 624 TKQIELSSFGGSSDEIDELRSIAMCSLCSKNWKDTALKVCGHVFCHQCAQDRLDARLRKC 683 Query: 390 PGCGTPFGQNDVREVKI 340 P C PF QND+ V + Sbjct: 684 PNCNKPFSQNDLLTVHL 700
>BRE1_CRYNE (Q5KBI0) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)| Length = 820 Score = 60.8 bits (146), Expect = 4e-09 Identities = 27/72 (37%), Positives = 40/72 (55%) Frame = -2 Query: 567 SENEEATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCP 388 S++E A Q+ +K +LKC C K+ VI KC H FC C+++ + R RKCP Sbjct: 748 SDHEWAITQERDKLLK----LLKCSCCEQNFKQQVIVKCMHTFCKQCLEQRIASRQRKCP 803 Query: 387 GCGTPFGQNDVR 352 CG F + D++ Sbjct: 804 ACGLAFAKEDIQ 815
>BRE1_DEBHA (Q6BWW6) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)| Length = 691 Score = 59.3 bits (142), Expect = 1e-08 Identities = 25/76 (32%), Positives = 41/76 (53%) Frame = -2 Query: 567 SENEEATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCP 388 + N + +Q+ + +++ ++I KC VC K+ IT C H+FC C Q L R R+CP Sbjct: 616 TNNTSSILQEDERQLEALRSIAKCSVCSKNWKDTAITVCGHVFCLGCTQERLAARLRRCP 675 Query: 387 GCGTPFGQNDVREVKI 340 C F ND+ + + Sbjct: 676 TCNKGFSANDLLSIHL 691
>BRE1_KLULA (Q6CWM4) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)| Length = 663 Score = 58.2 bits (139), Expect = 2e-08 Identities = 22/66 (33%), Positives = 35/66 (53%) Frame = -2 Query: 537 LQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGCGTPFGQND 358 L +E+++ + I+ C +C K + C H+FC C + L R RKCP C PF ND Sbjct: 598 LAEELENFRTIIYCSLCSKNWKNTALKTCGHVFCDVCCKERLAARMRKCPTCNKPFSSND 657 Query: 357 VREVKI 340 + + + Sbjct: 658 LLSIHL 663
>BRE1_CANGA (Q6FWF3) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)| Length = 693 Score = 56.6 bits (135), Expect = 7e-08 Identities = 22/66 (33%), Positives = 36/66 (54%) Frame = -2 Query: 537 LQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGCGTPFGQND 358 + +E+++ + ++ C +C K + I C H+FC C + L R RKCP C PF ND Sbjct: 628 MAEELENFRTLVYCSLCSKNWKNMAIRTCGHVFCEDCCKERLAARMRKCPTCNKPFSSND 687 Query: 357 VREVKI 340 + V + Sbjct: 688 LLMVHL 693
>BRE1_YEAST (Q07457) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-) (Brefeldin| A-sensitivity protein 1) Length = 700 Score = 56.6 bits (135), Expect = 7e-08 Identities = 23/76 (30%), Positives = 41/76 (53%) Frame = -2 Query: 567 SENEEATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCP 388 ++N+ ++ + L +E+ + + ++ C +C K + I C H+FC C + L R RKCP Sbjct: 625 NKNKGSSDEALVEELANFRTLVYCSLCSKNWKNMAIKTCGHVFCENCCKERLAARMRKCP 684 Query: 387 GCGTPFGQNDVREVKI 340 C F ND+ V + Sbjct: 685 TCNKAFSSNDLLTVHL 700
>BRE1_ASHGO (Q757D9) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)| Length = 643 Score = 56.6 bits (135), Expect = 7e-08 Identities = 23/66 (34%), Positives = 37/66 (56%) Frame = -2 Query: 537 LQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGCGTPFGQND 358 L +E+++ + ++ C +C K+ VI C H+FC+ C + L R RKCP C F ND Sbjct: 578 LAEELENFRTVVYCSLCSKNWKDTVIKTCGHVFCADCCKERLAARMRKCPTCNKGFSSND 637 Query: 357 VREVKI 340 + V + Sbjct: 638 LLVVHL 643
>BRE1_NEUCR (Q7S304) Ubiquitin-protein ligase bre-1 (EC 6.3.2.-)| Length = 707 Score = 48.9 bits (115), Expect = 1e-05 Identities = 19/58 (32%), Positives = 31/58 (53%) Frame = -2 Query: 531 DEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGCGTPFGQND 358 +E + + ++ C VC K ++ C H+FC+ C+ L R RKCP C F ++D Sbjct: 644 EEEEMLRNLVLCSVCRSNFKNTILKGCGHVFCNECVDNRLANRMRKCPSCNKAFDRSD 701
>SM3L1_ARATH (Q9FF61) Putative SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily A member 3-like 1 (EC 3.6.1.-) (SMARCA3-like protein 1) Length = 881 Score = 48.1 bits (113), Expect = 2e-05 Identities = 23/78 (29%), Positives = 37/78 (47%) Frame = -2 Query: 546 IQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGCGTPFG 367 +QKL ++D + C +C P ++IT+C H+FC CI + L+ CP C Sbjct: 620 LQKLVAALQDGEDF-DCPICISPPTNIIITRCAHIFCRACILQTLQRSKPLCPLCRGSLT 678 Query: 366 QNDVREVKI*SPSDAGLD 313 Q+D+ P + D Sbjct: 679 QSDLYNAPPPPPDSSNTD 696
>BRE1_GIBZE (Q4I7N9) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)| Length = 703 Score = 47.0 bits (110), Expect = 5e-05 Identities = 19/51 (37%), Positives = 26/51 (50%) Frame = -2 Query: 498 CGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGCGTPFGQNDVREV 346 C +C + K + C HLFC+ C+ + R RKCP C F + DV V Sbjct: 651 CTICRNNFKNTALKTCGHLFCNQCVDDRISNRMRKCPTCSRAFDKMDVMPV 701
>RAD18_ASHGO (Q75EN0) Postreplication repair ubiquitin-protein ligase E3 RAD18| (EC 6.-.-.-) Length = 443 Score = 47.0 bits (110), Expect = 5e-05 Identities = 21/56 (37%), Positives = 32/56 (57%) Frame = -2 Query: 528 EIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGCGTPFGQN 361 E+ D ++L+C +C D + V+T+C H FCS CI+ L + +CP C QN Sbjct: 22 ELADLDSLLRCHICKDMLQTPVLTQCGHTFCSLCIREYLN-KESRCPLCLAELRQN 76
>RNF5_CAEEL (Q09463) RING finger protein 5| Length = 235 Score = 47.0 bits (110), Expect = 5e-05 Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 2/73 (2%) Frame = -2 Query: 567 SENEEATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELR--HRK 394 SE + + + KD A +C +C D K+ V++ C HLFC C+ + L+ R ++ Sbjct: 3 SETKAPSEEPTSSSNKDESARFECNICLDAAKDAVVSLCGHLFCWPCLSQWLDTRPNNQV 62 Query: 393 CPGCGTPFGQNDV 355 CP C + N V Sbjct: 63 CPVCKSAIDGNKV 75
>RAD18_KLULA (Q6CTZ8) Postreplication repair ubiquitin-protein ligase E3 RAD18| (EC 6.-.-.-) Length = 427 Score = 46.6 bits (109), Expect = 7e-05 Identities = 20/49 (40%), Positives = 31/49 (63%) Frame = -2 Query: 528 EIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 382 ++ D ++L+C +C D K V+T C H FCS CI++ L+ + KCP C Sbjct: 22 QLTDLDSLLRCHICKDFLKASVLTPCGHSFCSICIRKYLQ-KESKCPLC 69
>BRCA1_CANFA (Q95153) Breast cancer type 1 susceptibility protein homolog| Length = 1878 Score = 46.2 bits (108), Expect = 9e-05 Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 2/68 (2%) Frame = -2 Query: 546 IQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRH--RKCPGCGTP 373 ++++Q+ + + IL+C +C + KE V TKC H+FC C+ + L R +CP C Sbjct: 8 VEEVQNVLNAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQRKGPSQCPLCKND 67 Query: 372 FGQNDVRE 349 + ++E Sbjct: 68 ITKRSLQE 75
>BRCA1_PONPY (Q6J6J0) Breast cancer type 1 susceptibility protein homolog| Length = 1863 Score = 45.8 bits (107), Expect = 1e-04 Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 2/68 (2%) Frame = -2 Query: 546 IQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRH--RKCPGCGTP 373 ++++Q+ I + IL+C +C + KE V TKC H+FC C+ + L + +CP C Sbjct: 8 VEEVQNVINAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKND 67 Query: 372 FGQNDVRE 349 + ++E Sbjct: 68 ITKRSLQE 75
>BRCA1_PANTR (Q9GKK8) Breast cancer type 1 susceptibility protein homolog| Length = 1863 Score = 45.8 bits (107), Expect = 1e-04 Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 2/68 (2%) Frame = -2 Query: 546 IQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRH--RKCPGCGTP 373 ++++Q+ I + IL+C +C + KE V TKC H+FC C+ + L + +CP C Sbjct: 8 VEEVQNVINAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKND 67 Query: 372 FGQNDVRE 349 + ++E Sbjct: 68 ITKRSLQE 75
>BRCA1_HUMAN (P38398) Breast cancer type 1 susceptibility protein (RING finger| protein 53) Length = 1863 Score = 45.8 bits (107), Expect = 1e-04 Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 2/68 (2%) Frame = -2 Query: 546 IQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRH--RKCPGCGTP 373 ++++Q+ I + IL+C +C + KE V TKC H+FC C+ + L + +CP C Sbjct: 8 VEEVQNVINAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKND 67 Query: 372 FGQNDVRE 349 + ++E Sbjct: 68 ITKRSLQE 75
>BRCA1_GORGO (Q6J6I8) Breast cancer type 1 susceptibility protein homolog| Length = 1863 Score = 45.8 bits (107), Expect = 1e-04 Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 2/68 (2%) Frame = -2 Query: 546 IQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRH--RKCPGCGTP 373 ++++Q+ I + IL+C +C + KE V TKC H+FC C+ + L + +CP C Sbjct: 8 VEEVQNVINAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKND 67 Query: 372 FGQNDVRE 349 + ++E Sbjct: 68 ITKRSLQE 75
>BRCA1_MACMU (Q6J6I9) Breast cancer type 1 susceptibility protein homolog| Length = 1863 Score = 45.4 bits (106), Expect = 2e-04 Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 2/68 (2%) Frame = -2 Query: 546 IQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRH--RKCPGCGTP 373 ++++Q+ I + IL+C +C + KE V TKC H+FC C+ + L + +CP C Sbjct: 8 VEEVQNVINAMQKILECPICLELIKEPVSTKCDHIFCRFCMLKLLNQKKGPSQCPLCKND 67 Query: 372 FGQNDVRE 349 + ++E Sbjct: 68 ITKRSLQE 75
>RAD18_YARLI (Q6CHI1) Postreplication repair ubiquitin-protein ligase E3 RAD18| (EC 6.-.-.-) Length = 344 Score = 45.4 bits (106), Expect = 2e-04 Identities = 20/48 (41%), Positives = 27/48 (56%) Frame = -2 Query: 525 IKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 382 +KD L+C +C + +IT C H FCS CIQR L ++CP C Sbjct: 19 LKDVDETLRCHICKEFFTAPMITGCGHTFCSLCIQRYLTNTSQRCPTC 66
>UHRF2_MOUSE (Q7TMI3) Ubiquitin-like PHD and RING finger domain-containing| protein 2 (EC 6.3.2.-) (Ubiquitin-like-containing PHD and RING finger domains protein 2) (Np95-like ring finger protein) (Nuclear zinc finger protein Np97) (NIRF) Length = 803 Score = 45.1 bits (105), Expect = 2e-04 Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 11/79 (13%) Frame = -2 Query: 558 EEATIQKLQDEI-----------KDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNL 412 E+ QKL DE+ K + C C + + V T+CFH C C+QR+ Sbjct: 703 EDCQNQKLWDEVLASLVEGPNFLKKLEQSFMCVCCQELVYQPVTTECFHNVCKDCLQRSF 762 Query: 411 ELRHRKCPGCGTPFGQNDV 355 + + CP C GQN V Sbjct: 763 KAQVFSCPACRHDLGQNYV 781
>BRCA1_MOUSE (P48754) Breast cancer type 1 susceptibility protein homolog| Length = 1812 Score = 45.1 bits (105), Expect = 2e-04 Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 2/57 (3%) Frame = -2 Query: 546 IQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRH--RKCPGC 382 IQ++Q+ + + IL+C +C + KE V TKC H+FC C+ + L + +CP C Sbjct: 8 IQEVQNVLHAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLC 64
>BRCA1_BOVIN (Q864U1) Breast cancer type 1 susceptibility protein homolog| Length = 1849 Score = 45.1 bits (105), Expect = 2e-04 Identities = 20/68 (29%), Positives = 38/68 (55%), Gaps = 2/68 (2%) Frame = -2 Query: 546 IQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRH--RKCPGCGTP 373 ++++Q+ + + IL+C +C + KE V TKC H+FC C+ + L + +CP C Sbjct: 8 VEEVQNVLNAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKND 67 Query: 372 FGQNDVRE 349 + ++E Sbjct: 68 ITKRSLQE 75
>RFWD2_HUMAN (Q8NHY2) Ring finger and WD repeat domain protein 2 (EC 6.3.2.-)| (Ubiquitin-protein ligase COP1) (Constitutive photomorphogenesis protein 1 homolog) (hCOP1) Length = 731 Score = 44.7 bits (104), Expect = 3e-04 Identities = 19/39 (48%), Positives = 25/39 (64%) Frame = -2 Query: 498 CGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 382 C +CFD +E +TKC H FC CI ++LE +R CP C Sbjct: 136 CPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNR-CPKC 173
>RFWD2_MOUSE (Q9R1A8) Ring finger and WD repeat domain protein 2 (EC 6.3.2.-)| (Ubiquitin-protein ligase COP1) (Constitutive photomorphogenesis protein 1 homolog) (mCOP1) Length = 733 Score = 44.7 bits (104), Expect = 3e-04 Identities = 19/39 (48%), Positives = 25/39 (64%) Frame = -2 Query: 498 CGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 382 C +CFD +E +TKC H FC CI ++LE +R CP C Sbjct: 138 CPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNR-CPKC 175
>UHRF2_HUMAN (Q96PU4) Ubiquitin-like PHD and RING finger domain-containing| protein 2 (EC 6.3.2.-) (Ubiquitin-like-containing PHD and RING finger domains protein 2) (Np95/ICBP90-like RING finger protein) (Np95-like RING finger protein) (Nuclear zinc finger Length = 802 Score = 44.7 bits (104), Expect = 3e-04 Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 11/77 (14%) Frame = -2 Query: 558 EEATIQKLQDEI-----------KDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNL 412 E+ QKL DE+ K + C C + + V T+CFH C C+QR+ Sbjct: 702 EDCQNQKLWDEVLSHLVEGPNFLKKLEQSFMCVCCQELVYQPVTTECFHNVCKDCLQRSF 761 Query: 411 ELRHRKCPGCGTPFGQN 361 + + CP C GQN Sbjct: 762 KAQVFSCPACRHDLGQN 778
>BRCA1_RAT (O54952) Breast cancer type 1 susceptibility protein homolog| Length = 1817 Score = 43.5 bits (101), Expect = 6e-04 Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 2/57 (3%) Frame = -2 Query: 546 IQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRH--RKCPGC 382 IQ++Q+ + + IL+C +C + KE V T+C H+FC C+ + L + +CP C Sbjct: 8 IQEVQNVLHAMQKILECPICLELIKEPVSTQCDHIFCKFCMLKLLNQKKGPSQCPLC 64
>RAD18_SCHPO (O74747) Postreplication repair ubiquitin-protein ligase E3 rad18| (EC 6.-.-.-) (RAD18 homolog) Length = 387 Score = 43.5 bits (101), Expect = 6e-04 Identities = 20/59 (33%), Positives = 32/59 (54%) Frame = -2 Query: 525 IKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGCGTPFGQNDVRE 349 +K + L+C +C + + +IT C H FCS CI+ L H CP C P ++ +R+ Sbjct: 20 LKGLDSSLRCLICHEYFRAPLITSCSHTFCSFCIRDYLR-EHPMCPACRAPEQESRLRK 77
>RAD18_MOUSE (Q9QXK2) Postreplication repair protein RAD18 (mRAD18Sc)| Length = 509 Score = 43.1 bits (100), Expect = 8e-04 Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 1/75 (1%) Frame = -2 Query: 525 IKDCKAILKCGVCFDRPK-EVVITKCFHLFCSTCIQRNLELRHRKCPGCGTPFGQNDVRE 349 +K +L+CG+CF+ V+I +C H +CS CI++ L + +CP C + D+R Sbjct: 16 MKTIDDLLRCGICFEYFNIAVIIPQCSHNYCSLCIRKFLSYK-TQCPTCCVAVTEPDLRN 74 Query: 348 VKI*SPSDAGLDDLV 304 ++ LD+LV Sbjct: 75 NRL-------LDELV 82
>RAD18_ASPFU (Q4WZJ6) Postreplication repair ubiquitin-protein ligase E3 rad18| (EC 6.-.-.-) Length = 418 Score = 43.1 bits (100), Expect = 8e-04 Identities = 21/48 (43%), Positives = 26/48 (54%) Frame = -2 Query: 525 IKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 382 + ++ L+C VC D VIT C H FCS CI+R L KCP C Sbjct: 21 VSPLESSLRCQVCKDFFDNPVITSCSHTFCSLCIRRCLS-TEGKCPAC 67
>RAD18_CANGA (Q6FPI4) Postreplication repair ubiquitin-protein ligase E3 RAD18| (EC 6.-.-.-) Length = 411 Score = 42.0 bits (97), Expect = 0.002 Identities = 19/49 (38%), Positives = 28/49 (57%) Frame = -2 Query: 528 EIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 382 ++++ +L+C +C D K V+T C H FCS CI+ L KCP C Sbjct: 17 QLQELDDLLRCHICKDFLKNPVLTPCGHTFCSLCIRGYLS-NEPKCPLC 64
>RAD18_EMENI (Q02398) Postreplication repair ubiquitin-protein ligase E3 rad18| (EC 6.-.-.-) Length = 443 Score = 42.0 bits (97), Expect = 0.002 Identities = 21/41 (51%), Positives = 23/41 (56%) Frame = -2 Query: 504 LKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 382 L+C VC D VIT C H FCS CI+R L KCP C Sbjct: 28 LRCQVCKDFFDNPVITSCSHTFCSLCIRRCLS-TEGKCPTC 67
>SMRA3_HUMAN (Q14527) SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily A member 3 (EC 3.6.1.-) (Sucrose nonfermenting protein 2-like 3) (DNA binding protein/plasminogen activator inhibitor 1 regulator) (Helicase-like tran Length = 1009 Score = 42.0 bits (97), Expect = 0.002 Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 2/53 (3%) Frame = -2 Query: 501 KCGVCFDRPKEVVITKCFHLFCSTCIQRNL--ELRHRKCPGCGTPFGQNDVRE 349 +C +C D VIT C H+FC CI + + E H KCP C +ND+ E Sbjct: 759 ECAICLDSLTVPVITHCAHVFCKPCICQVIQNEQPHAKCPLC-----RNDIHE 806
>RAD18_HUMAN (Q9NS91) Postreplication repair protein RAD18 (hRAD18) (hHR18)| (RING finger protein 73) Length = 495 Score = 41.6 bits (96), Expect = 0.002 Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 1/75 (1%) Frame = -2 Query: 525 IKDCKAILKCGVCFDRPK-EVVITKCFHLFCSTCIQRNLELRHRKCPGCGTPFGQNDVRE 349 +K +L+CG+CF+ ++I +C H +CS CI++ L + +CP C + D++ Sbjct: 16 MKTIDDLLRCGICFEYFNIAMIIPQCSHNYCSLCIRKFLSYK-TQCPTCCVTVTEPDLKN 74 Query: 348 VKI*SPSDAGLDDLV 304 +I LD+LV Sbjct: 75 NRI-------LDELV 82
>RING1_DROME (Q9VB08) Ubiquitin ligase protein RING1 (EC 6.3.2.-) (dRING1)| (dRING protein) (Sex comb extra protein) Length = 435 Score = 41.6 bits (96), Expect = 0.002 Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 1/42 (2%) Frame = -2 Query: 504 LKCGVCFDRPKEVVITK-CFHLFCSTCIQRNLELRHRKCPGC 382 L C +C D K+ + TK C H FCS CI L +++CP C Sbjct: 44 LMCPICLDMLKKTMTTKECLHRFCSDCIVTALRSGNKECPTC 85
>NHL1_CAEEL (Q03601) RING finger protein nhl-1| Length = 974 Score = 41.6 bits (96), Expect = 0.002 Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 2/50 (4%) Frame = -2 Query: 525 IKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHR--KCPGC 382 ++ + +L C +C DR K+ + C H FC C++ + HR KCP C Sbjct: 34 LEKIEQLLTCPICLDRYKQPKLLPCQHTFCYPCLESCADTLHRNLKCPEC 83
>RING1_RAT (Q6MGB6) Polycomb complex protein RING1 (RING finger protein 1)| Length = 406 Score = 41.2 bits (95), Expect = 0.003 Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 1/42 (2%) Frame = -2 Query: 504 LKCGVCFDRPKEVVITK-CFHLFCSTCIQRNLELRHRKCPGC 382 L C +C D K + TK C H FCS CI L +++CP C Sbjct: 46 LMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTC 87
>RING1_MOUSE (O35730) Polycomb complex protein RING1 (RING finger protein 1)| (Transcription repressor Ring1A) Length = 406 Score = 41.2 bits (95), Expect = 0.003 Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 1/42 (2%) Frame = -2 Query: 504 LKCGVCFDRPKEVVITK-CFHLFCSTCIQRNLELRHRKCPGC 382 L C +C D K + TK C H FCS CI L +++CP C Sbjct: 46 LMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTC 87
>RING1_HUMAN (Q06587) Polycomb complex protein RING1 (RING finger protein 1)| Length = 406 Score = 41.2 bits (95), Expect = 0.003 Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 1/42 (2%) Frame = -2 Query: 504 LKCGVCFDRPKEVVITK-CFHLFCSTCIQRNLELRHRKCPGC 382 L C +C D K + TK C H FCS CI L +++CP C Sbjct: 46 LMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTC 87
>RING1_CANFA (Q5TJF3) Ubiquitin ligase protein RING1 (EC 6.3.2.-) (RING finger| protein 1) (RING1a) Length = 406 Score = 41.2 bits (95), Expect = 0.003 Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 1/42 (2%) Frame = -2 Query: 504 LKCGVCFDRPKEVVITK-CFHLFCSTCIQRNLELRHRKCPGC 382 L C +C D K + TK C H FCS CI L +++CP C Sbjct: 46 LMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTC 87
>RAD5_YEAST (P32849) DNA repair protein RAD5 (EC 3.6.1.-) (Radiation sensitivity| protein 5) (Revertibility protein 2) Length = 1169 Score = 41.2 bits (95), Expect = 0.003 Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 10/73 (13%) Frame = -2 Query: 570 TSENEEATIQKLQDEIKDCKAI--LKCGVCFDRPKEV---VITKCFHLFCSTCIQRNLEL 406 + E +A IQ+L+ + D K+ L+C +C P ++ + T+C H FC C+ +E Sbjct: 888 SKEELDAMIQRLKVKYPDNKSFQSLECSICTTEPMDLDKALFTECGHSFCEKCLFEYIEF 947 Query: 405 RHR-----KCPGC 382 ++ KCP C Sbjct: 948 QNSKNLGLKCPNC 960
>RNG2A_XENLA (Q66J69) Ubiquitin ligase protein RING2-A (EC 6.3.2.-) (RING finger| protein 2-A) (RING finger protein 1B-A) (RING1b-A) Length = 344 Score = 41.2 bits (95), Expect = 0.003 Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 1/42 (2%) Frame = -2 Query: 504 LKCGVCFDRPKEVVITK-CFHLFCSTCIQRNLELRHRKCPGC 382 L C +C D K + TK C H FCS CI L +++CP C Sbjct: 46 LMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTC 87
>RNG2B_XENLA (Q7ZWM8) Ubiquitin ligase protein RING2-B (EC 6.3.2.-) (RING finger| protein 2-B) (RING finger protein 1B-B) (RING1b-B) Length = 343 Score = 41.2 bits (95), Expect = 0.003 Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 1/42 (2%) Frame = -2 Query: 504 LKCGVCFDRPKEVVITK-CFHLFCSTCIQRNLELRHRKCPGC 382 L C +C D K + TK C H FCS CI L +++CP C Sbjct: 45 LMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTC 86
>RING1_MACMU (Q8WMN5) Polycomb complex protein RING1 (RING finger protein 1)| Length = 377 Score = 41.2 bits (95), Expect = 0.003 Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 1/42 (2%) Frame = -2 Query: 504 LKCGVCFDRPKEVVITK-CFHLFCSTCIQRNLELRHRKCPGC 382 L C +C D K + TK C H FCS CI L +++CP C Sbjct: 17 LMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTC 58
>MIB1_MOUSE (Q80SY4) Ubiquitin ligase protein MIB1 (EC 6.3.2.-) (Mind bomb| homolog 1) (DAPK-interacting protein 1) (DIP-1) Length = 1006 Score = 40.8 bits (94), Expect = 0.004 Identities = 23/60 (38%), Positives = 29/60 (48%) Frame = -2 Query: 561 NEEATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 382 N A +QKLQ +++D K C VC DR K ++ C H C C R E CP C Sbjct: 942 NVNADVQKLQQQLQDIKEQTMCPVCLDRLKNMIFL-CGHGTCQLCGDRMSE-----CPIC 995
>MIB1_HUMAN (Q86YT6) Ubiquitin ligase protein MIB1 (EC 6.3.2.-) (Mind bomb| homolog 1) (DAPK-interacting protein 1) (DIP-1) (Zinc finger ZZ type with ankyrin repeat domain protein 2) Length = 1006 Score = 40.8 bits (94), Expect = 0.004 Identities = 23/60 (38%), Positives = 29/60 (48%) Frame = -2 Query: 561 NEEATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 382 N A +QKLQ +++D K C VC DR K ++ C H C C R E CP C Sbjct: 942 NVNADVQKLQQQLQDIKEQTMCPVCLDRLKNMIFL-CGHGTCQLCGDRMSE-----CPIC 995
>MIB1_XENLA (Q6GNY1) Ubiquitin ligase protein MIB1 (EC 6.3.2.-) (Mind bomb| homolog 1) Length = 1011 Score = 40.8 bits (94), Expect = 0.004 Identities = 23/60 (38%), Positives = 29/60 (48%) Frame = -2 Query: 561 NEEATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 382 N A +QKLQ +++D K C VC DR K ++ C H C C R E CP C Sbjct: 943 NVNADVQKLQQQLQDIKEQTMCPVCLDRLKNMIF-MCGHGTCQLCGDRMSE-----CPIC 996
>MIB1_BRARE (Q804S5) Ubiquitin ligase protein mib (EC 6.3.2.-) (Mind bomb| protein) Length = 1030 Score = 40.8 bits (94), Expect = 0.004 Identities = 23/60 (38%), Positives = 29/60 (48%) Frame = -2 Query: 561 NEEATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 382 N A +QKLQ +++D K C VC DR K ++ C H C C R E CP C Sbjct: 966 NVNADVQKLQQQLQDIKEQTMCPVCLDRLKNMIF-MCGHGTCQLCGDRMSE-----CPIC 1019
>SMRA3_RABIT (Q95216) SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily A member 3 (EC 3.6.1.-) (Sucrose nonfermenting protein 2-like 3) (RUSH-1) Length = 1005 Score = 40.8 bits (94), Expect = 0.004 Identities = 23/56 (41%), Positives = 28/56 (50%), Gaps = 8/56 (14%) Frame = -2 Query: 525 IKDCKAIL------KCGVCFDRPKEVVITKCFHLFCSTCIQRNL--ELRHRKCPGC 382 IK K IL +C +C D VIT C H+FC CI + + E H KCP C Sbjct: 742 IKKMKLILSSGSDEECAICLDSLTVPVITHCAHVFCKPCICQCIQNEQPHAKCPLC 797
>RAD18_YEAST (P10862) Postreplication repair ubiquitin-protein ligase E3 RAD18| (EC 6.-.-.-) (Radiation sensitivity protein 18) Length = 487 Score = 40.4 bits (93), Expect = 0.005 Identities = 20/52 (38%), Positives = 29/52 (55%) Frame = -2 Query: 507 ILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGCGTPFGQNDVR 352 +L+C +C D K V+T C H FCS CI+ +L CP C F ++ +R Sbjct: 25 LLRCHICKDFLKVPVLTPCGHTFCSLCIRTHLN-NQPNCPLCLFEFRESLLR 75
>RAD5_CANAL (Q5ACX1) DNA repair protein RAD5 (EC 3.6.1.-)| Length = 1084 Score = 40.4 bits (93), Expect = 0.005 Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 8/81 (9%) Frame = -2 Query: 561 NEEATIQKLQDEIKDCKAILKCGVCFDRP---KEVVITKCFHLFCSTCIQRNLEL----- 406 N+ +K+ + K +C +C P E+V+T C H FC +CI +L+ Sbjct: 795 NDTDVKEKMYNLYGKIKEENECSICTQVPIPYSEMVVTPCAHTFCLSCILEHLDFQKELK 854 Query: 405 RHRKCPGCGTPFGQNDVREVK 343 + + CP C +P + + ++ Sbjct: 855 KEKLCPNCRSPISKYQLFRIR 875
>TRI26_MOUSE (Q99PN3) Tripartite motif protein 26 (Zinc finger protein 173)| Length = 545 Score = 40.0 bits (92), Expect = 0.007 Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 2/71 (2%) Frame = -2 Query: 552 ATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQ--RNLELRHRKCPGCG 379 A ++ L++E+ C +C D ++ V C H+FC +C R + CP C Sbjct: 5 APLRSLEEEVT-------CSICLDYLRDPVTIDCGHVFCRSCTSDIRPISGNRPVCPLCK 57 Query: 378 TPFGQNDVREV 346 PF + ++R V Sbjct: 58 KPFKKENIRPV 68
>TRI26_RAT (P62603) Tripartite motif protein 26 (Zinc finger protein 173)| Length = 542 Score = 40.0 bits (92), Expect = 0.007 Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 2/71 (2%) Frame = -2 Query: 552 ATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQ--RNLELRHRKCPGCG 379 A ++ L++E+ C +C D ++ V C H+FC +C R + CP C Sbjct: 5 APLRSLEEEVT-------CSICLDYLRDPVTIDCGHVFCRSCTSDIRPISGNRPVCPLCK 57 Query: 378 TPFGQNDVREV 346 PF + ++R V Sbjct: 58 KPFKKENIRPV 68
>YB1B_SCHPO (P87176) Hypothetical RING finger protein C3D6.11c in chromosome II| Length = 269 Score = 39.7 bits (91), Expect = 0.009 Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 2/51 (3%) Frame = -2 Query: 501 KCGVCFDRPKEVVITKCFHLFCSTCIQRNL--ELRHRKCPGCGTPFGQNDV 355 KC +C D P+ + T C H+FC+ CI L +KCP C N V Sbjct: 205 KCVICLDSPENLSCTPCGHIFCNFCILSALGTTAATQKCPVCRRKVHPNKV 255
>RAD18_DEBHA (Q6BLM3) Postreplication repair ubiquitin-protein ligase E3 RAD18| (EC 6.-.-.-) Length = 491 Score = 39.7 bits (91), Expect = 0.009 Identities = 19/60 (31%), Positives = 34/60 (56%) Frame = -2 Query: 525 IKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGCGTPFGQNDVREV 346 +K+ ++ +C +C + K VIT C H FCS CI+ L + + CP C +++++ V Sbjct: 27 LKELDSLQRCYICKEFLKAPVITSCNHTFCSHCIREYL-IVNSHCPLCKAEQFESNLKRV 85
>RAG1_ONCMY (Q91187) V(D)J recombination-activating protein 1 (RAG-1)| Length = 1073 Score = 39.7 bits (91), Expect = 0.009 Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 1/71 (1%) Frame = -2 Query: 564 ENEEATIQKLQDEIK-DCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCP 388 + E + + L +++ D + + C VC E V + C HLFC +CI + + CP Sbjct: 287 QKEHLSARLLSEDLPVDFLSSVTCQVCDHLLSEPVQSPCRHLFCRSCIAKYIYSLGPHCP 346 Query: 387 GCGTPFGQNDV 355 C P G D+ Sbjct: 347 ACTLPCGPADL 357
>SMRA3_MOUSE (Q6PCN7) SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily A member 3 (EC 3.6.1.-) (Sucrose nonfermenting protein 2-like 3) (TNF-response element-binding protein) (P113) Length = 1003 Score = 39.7 bits (91), Expect = 0.009 Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 2/42 (4%) Frame = -2 Query: 501 KCGVCFDRPKEVVITKCFHLFCSTCIQR--NLELRHRKCPGC 382 +C +C D VIT C H+FC CI + + E H KCP C Sbjct: 753 ECAICLDSLTFPVITHCAHVFCKPCICQVIHSEQPHAKCPLC 794
>RING2_PONPY (Q5R9J5) Ubiquitin ligase protein RING2 (EC 6.3.2.-) (RING finger| protein 2) (RING finger protein 1B) (RING1b) Length = 336 Score = 39.7 bits (91), Expect = 0.009 Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 1/42 (2%) Frame = -2 Query: 504 LKCGVCFDRPKEVVITK-CFHLFCSTCIQRNLELRHRKCPGC 382 L C +C D K + TK C H FC+ CI L +++CP C Sbjct: 49 LMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTC 90
>RING2_MOUSE (Q9CQJ4) Ubiquitin ligase protein RING2 (EC 6.3.2.-) (RING finger| protein 2) (RING finger protein 1B) (RING1b) Length = 336 Score = 39.7 bits (91), Expect = 0.009 Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 1/42 (2%) Frame = -2 Query: 504 LKCGVCFDRPKEVVITK-CFHLFCSTCIQRNLELRHRKCPGC 382 L C +C D K + TK C H FC+ CI L +++CP C Sbjct: 49 LMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTC 90
>RING2_HUMAN (Q99496) Ubiquitin ligase protein RING2 (EC 6.3.2.-) (RING finger| protein 2) (RING finger protein 1B) (RING1b) (RING finger protein BAP-1) (DinG protein) (Huntingtin-interacting protein 2-interacting protein 3) (HIP2-interacting protein 3) Length = 336 Score = 39.7 bits (91), Expect = 0.009 Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 1/42 (2%) Frame = -2 Query: 504 LKCGVCFDRPKEVVITK-CFHLFCSTCIQRNLELRHRKCPGC 382 L C +C D K + TK C H FC+ CI L +++CP C Sbjct: 49 LMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTC 90
>RING2_BRARE (Q803I4) Ubiquitin ligase protein RING2 (EC 6.3.2.-) (RING finger| protein 2) (RING finger protein 1B) (RING1b) Length = 336 Score = 39.7 bits (91), Expect = 0.009 Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 1/42 (2%) Frame = -2 Query: 504 LKCGVCFDRPKEVVITK-CFHLFCSTCIQRNLELRHRKCPGC 382 L C +C D K + TK C H FC+ CI L +++CP C Sbjct: 49 LMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTC 90
>CWC24_KLULA (Q6CSS6) Pre-mRNA-splicing factor CWC24| Length = 229 Score = 39.7 bits (91), Expect = 0.009 Identities = 20/62 (32%), Positives = 31/62 (50%) Frame = -2 Query: 564 ENEEATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPG 385 E +E + K +EI +C +C V+TKC H FCS+C + +++ CP Sbjct: 154 ETQEKEVLKELEEIP-----FRCFLCKKEYTSPVVTKCNHYFCSSCFMKQMKV-STNCPI 207 Query: 384 CG 379 CG Sbjct: 208 CG 209
>RING2_RAT (Q4KLY4) Ubiquitin ligase protein RING2 (EC 6.3.2.-) (RING finger| protein 2) (RING finger protein 1B) (RING1b) Length = 308 Score = 39.7 bits (91), Expect = 0.009 Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 1/42 (2%) Frame = -2 Query: 504 LKCGVCFDRPKEVVITK-CFHLFCSTCIQRNLELRHRKCPGC 382 L C +C D K + TK C H FC+ CI L +++CP C Sbjct: 49 LMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTC 90
>TRI40_RAT (Q6MFY8) Tripartite motif protein 40 (RING finger protein 35)| Length = 247 Score = 39.3 bits (90), Expect = 0.011 Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 4/46 (8%) Frame = -2 Query: 498 CGVCFDRPKEVVITKCFHLFCSTCIQRNLELRH----RKCPGCGTP 373 C +C D KE V T C HLFC C+ R+++ CP C P Sbjct: 12 CPICLDPLKEAVSTDCRHLFCRMCLIRHMDKASVSGVLSCPVCRKP 57
>TRI26_PANTR (Q7YR34) Tripartite motif protein 26 (Zinc finger protein 173)| Length = 539 Score = 39.3 bits (90), Expect = 0.011 Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 2/71 (2%) Frame = -2 Query: 552 ATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQ--RNLELRHRKCPGCG 379 A ++ L++E+ C +C D ++ V C H+FC +C R + CP C Sbjct: 5 APLRSLEEEVT-------CSICLDYLRDPVTIDCGHVFCRSCTTDVRPISGSRPVCPLCK 57 Query: 378 TPFGQNDVREV 346 PF + ++R V Sbjct: 58 KPFKKENIRPV 68
>TRI26_HUMAN (Q12899) Tripartite motif protein 26 (Zinc finger protein 173)| (Acid finger protein) (AFP) (RING finger protein 95) Length = 539 Score = 39.3 bits (90), Expect = 0.011 Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 2/71 (2%) Frame = -2 Query: 552 ATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQ--RNLELRHRKCPGCG 379 A ++ L++E+ C +C D ++ V C H+FC +C R + CP C Sbjct: 5 APLRSLEEEVT-------CSICLDYLRDPVTIDCGHVFCRSCTTDVRPISGSRPVCPLCK 57 Query: 378 TPFGQNDVREV 346 PF + ++R V Sbjct: 58 KPFKKENIRPV 68
>CWC24_CRYNE (Q5KB05) Pre-mRNA-splicing factor CWC24| Length = 329 Score = 39.3 bits (90), Expect = 0.011 Identities = 17/61 (27%), Positives = 32/61 (52%) Frame = -2 Query: 555 EATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGCGT 376 E ++++++E ++ + C +C + V+TKC H FC C + + + KC CG Sbjct: 218 EEGVREVEEEDEEEEVPFACLICRQPFTQPVVTKCGHYFCMGCAAKRFQ-KSPKCYACGA 276 Query: 375 P 373 P Sbjct: 277 P 277
>RAD5_KLULA (Q6CJM4) DNA repair protein RAD5 (EC 3.6.1.-)| Length = 1114 Score = 39.3 bits (90), Expect = 0.011 Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 5/61 (8%) Frame = -2 Query: 489 CFDRPKEVVITKCFHLFCSTCIQRNLELRHRK-----CPGCGTPFGQNDVREVKI*SPSD 325 C + V IT+C H FC C+ +E + K CP C P + +V ++K P D Sbjct: 865 CIEPLSAVSITECLHTFCEPCLAEYIEFQQNKKLSINCPYCRMPISEANVLKLK--EPID 922 Query: 324 A 322 A Sbjct: 923 A 923
>RAG1_MOUSE (P15919) V(D)J recombination-activating protein 1 (RAG-1)| Length = 1040 Score = 38.9 bits (89), Expect = 0.015 Identities = 18/50 (36%), Positives = 24/50 (48%) Frame = -2 Query: 504 LKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGCGTPFGQNDV 355 + C +C + V T C HLFC CI R L++ CP C P D+ Sbjct: 288 ISCQICEHILADPVETSCKHLFCRICILRCLKVMGSYCPSCRYPCFPTDL 337
>A33_PLEWA (Q02084) Zinc-binding protein A33| Length = 624 Score = 38.9 bits (89), Expect = 0.015 Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 1/55 (1%) Frame = -2 Query: 543 QKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHR-KCPGC 382 +K+ DE D L C +C KE VI +C H FC CI ++ E CP C Sbjct: 147 RKVDDEEDDFTEDLTCPLCRSLFKEPVILECGHNFCKHCIDKSWESASAFSCPEC 201
>RAD18_CANAL (Q5A4N5) Postreplication repair ubiquitin-protein ligase E3 RAD18| (EC 6.-.-.-) Length = 378 Score = 38.5 bits (88), Expect = 0.019 Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 1/75 (1%) Frame = -2 Query: 501 KCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGCGTPFGQNDVREVKI*SPSDA 322 +C +C D V T+C H +CS CI R LR +CP C T ++ ++ D Sbjct: 28 RCYICKDLLNAPVRTQCDHTYCSQCI-REFLLRDNRCPLCKTEVFESGLKR-------DP 79 Query: 321 GLDDLVV-FGTLGQH 280 L+++V+ + +L H Sbjct: 80 LLEEIVISYASLRPH 94
>RAG1_PIG (Q867B5) V(D)J recombination-activating protein 1 (RAG-1)| Length = 1043 Score = 38.5 bits (88), Expect = 0.019 Identities = 17/50 (34%), Positives = 24/50 (48%) Frame = -2 Query: 504 LKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGCGTPFGQNDV 355 + C +C + V T C H+FC CI R L++ CP C P D+ Sbjct: 291 ISCQICEHILADPVETSCKHVFCRICILRCLKVMGSSCPSCHYPCFPTDL 340
>RN125_MACFA (Q95KF1) RING finger protein 125 (EC 6.3.2.-)| Length = 231 Score = 38.5 bits (88), Expect = 0.019 Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 7/80 (8%) Frame = -2 Query: 498 CGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC-------GTPFGQNDVREVKI 340 C VC + + V T+C H+FC +CI +L+ CP C G P + + +K Sbjct: 36 CAVCLEVLHQPVRTRCGHVFCRSCIATSLKNNKWTCPYCRAYLPSEGVP-ATDVAKRMKS 94 Query: 339 *SPSDAGLDDLVVFGTLGQH 280 + A D LV G + H Sbjct: 95 EYKNCAECDTLVCLGEMRAH 114
>RAD18_NEUCR (P33288) Postreplication repair ubiquitin-protein ligase E3 rad-18| (EC 6.-.-.-) (UV radiation sensitivity protein 2) Length = 501 Score = 38.5 bits (88), Expect = 0.019 Identities = 18/40 (45%), Positives = 23/40 (57%) Frame = -2 Query: 501 KCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 382 +C VC D ++T C H FCS CI+R L + KCP C Sbjct: 33 RCHVCKDFYDSPMLTSCNHTFCSLCIRRCLSV-DSKCPLC 71
>TOPRS_HUMAN (Q9NS56) Ubiquitin-protein E3 ligase Topors (EC 6.3.2.-)| (SUMO1-protein E3 ligase Topors) (Topoisomerase I-binding RING finger protein) (Topoisomerase I-binding arginine/serine-rich protein) (Tumor suppressor p53-binding protein 3) (p53-bindi Length = 1045 Score = 38.1 bits (87), Expect = 0.025 Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 2/64 (3%) Frame = -2 Query: 555 EATIQKLQDEIK-DCKAILKCGVCFDRPKEV-VITKCFHLFCSTCIQRNLELRHRKCPGC 382 +A KLQ + D KC +C DR V + +C H FC C+Q +CP C Sbjct: 83 KAGTSKLQQTVPADASPDSKCPICLDRFDNVSYLDRCLHKFCFRCVQ-EWSKNKAECPLC 141 Query: 381 GTPF 370 PF Sbjct: 142 KQPF 145
>RAG1_HUMAN (P15918) V(D)J recombination-activating protein 1 (RAG-1) (RING| finger protein 74) Length = 1043 Score = 38.1 bits (87), Expect = 0.025 Identities = 17/50 (34%), Positives = 24/50 (48%) Frame = -2 Query: 504 LKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGCGTPFGQNDV 355 + C +C + V T C H+FC CI R L++ CP C P D+ Sbjct: 291 ISCQICEHILADPVETNCKHVFCRVCILRCLKVMGSYCPSCRYPCFPTDL 340
>TOPRS_MOUSE (Q80Z37) Ubiquitin-protein E3 ligase Topors (EC 6.3.2.-)| (SUMO1-protein E3 ligase Topors) (Topoisomerase I-binding RING finger protein) (Topoisomerase I-binding arginine/serine-rich protein) (Tumor suppressor p53-binding protein 3) (p53-bindi Length = 1033 Score = 38.1 bits (87), Expect = 0.025 Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 2/64 (3%) Frame = -2 Query: 555 EATIQKLQDEIK-DCKAILKCGVCFDRPKEV-VITKCFHLFCSTCIQRNLELRHRKCPGC 382 +A KLQ + D KC +C DR V + +C H FC C+Q +CP C Sbjct: 84 KAGTSKLQQTVPADASPDSKCPICLDRFDNVSYLDRCLHKFCFRCVQ-EWSKNKAECPLC 142 Query: 381 GTPF 370 PF Sbjct: 143 KQPF 146
>TRI30_MOUSE (P15533) Tripartite motif protein 30 (Down regulatory protein of| interleukin 2 receptor) Length = 496 Score = 37.7 bits (86), Expect = 0.033 Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 5/59 (8%) Frame = -2 Query: 513 KAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHR-----KCPGCGTPFGQNDVR 352 K + C +C + KE V C H FC CI N E CP C P+ ++R Sbjct: 10 KEEVTCPICLELLKEPVSADCNHSFCRACITLNYESNRNTDGKGNCPVCRVPYPFGNLR 68
>RAG1_RABIT (P34088) V(D)J recombination-activating protein 1 (RAG-1)| Length = 1042 Score = 37.7 bits (86), Expect = 0.033 Identities = 17/50 (34%), Positives = 24/50 (48%) Frame = -2 Query: 504 LKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGCGTPFGQNDV 355 + C +C + V T C H+FC CI R L++ CP C P D+ Sbjct: 290 ISCQICEHILADPVETSCKHVFCRICILRCLKVMGSYCPSCQYPCFPTDL 339
>DTX3_HUMAN (Q8N9I9) Protein deltex-3 (Deltex-3) (Deltex3)| Length = 347 Score = 37.7 bits (86), Expect = 0.033 Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 1/60 (1%) Frame = -2 Query: 540 KLQDEIKDCKAILKCGVCFDRPKEV-VITKCFHLFCSTCIQRNLELRHRKCPGCGTPFGQ 364 +L++E ++ ++ C +C + + KC H FC CI R L+++ + CP CG +GQ Sbjct: 152 RLREEAEEQEST--CPICLGEIQNAKTLEKCRHSFCEGCITRALQVK-KACPMCGRFYGQ 208
>RN125_HUMAN (Q96EQ8) RING finger protein 125 (EC 6.3.2.-) (T-cell RING| activation protein 1) (TRAC-1) Length = 231 Score = 37.7 bits (86), Expect = 0.033 Identities = 15/39 (38%), Positives = 22/39 (56%) Frame = -2 Query: 498 CGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 382 C VC + + V T+C H+FC +CI +L+ CP C Sbjct: 36 CAVCLEVLHQPVRTRCGHVFCRSCIATSLKNNKWTCPYC 74
>TRI35_HUMAN (Q9UPQ4) Tripartite motif protein 35 (Hemopoeitic lineage switch| protein 5) Length = 493 Score = 37.7 bits (86), Expect = 0.033 Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 1/55 (1%) Frame = -2 Query: 513 KAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELR-HRKCPGCGTPFGQNDVR 352 K L C VC+D ++ V +C H FC C+ R E++ CP C D+R Sbjct: 16 KEELLCAVCYDPFRDAVTLRCGHNFCRGCVSRCWEVQVSPTCPVCKDRASPADLR 70
>TRI40_PANTR (Q1XHT8) Tripartite motif 40 protein| Length = 229 Score = 37.7 bits (86), Expect = 0.033 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 4/46 (8%) Frame = -2 Query: 498 CGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRK----CPGCGTP 373 C +C + KE V T C HLFC C+ +++E CP C P Sbjct: 14 CPICQESLKEAVSTNCGHLFCRVCLTQHVEKASASGVFCCPLCRKP 59
>TRI40_HUMAN (Q6P9F5) Tripartite motif 40 protein (RING finger protein 35)| Length = 258 Score = 37.4 bits (85), Expect = 0.043 Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 5/47 (10%) Frame = -2 Query: 498 CGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRK-----CPGCGTP 373 C +C + KE V T C HLFC C+ +++E CP C P Sbjct: 14 CPICQESLKEAVSTNCGHLFCRVCLTQHVEKASASGVFCCCPLCRKP 60
>RAG1_XENLA (Q91829) V(D)J recombination-activating protein 1 (RAG-1)| Length = 1045 Score = 37.4 bits (85), Expect = 0.043 Identities = 18/50 (36%), Positives = 24/50 (48%) Frame = -2 Query: 504 LKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGCGTPFGQNDV 355 + C VC + V T C HLFC CI + ++L CP C P D+ Sbjct: 292 VSCLVCEHILSDPVQTSCKHLFCRICILKYIKLMGCYCPSCKYPCFPTDL 341
>CBLC_MOUSE (Q80XL1) Signal transduction protein CBL-C (SH3-binding protein| CBL-C) (CBL-3) Length = 496 Score = 37.4 bits (85), Expect = 0.043 Identities = 15/39 (38%), Positives = 21/39 (53%) Frame = -2 Query: 498 CGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 382 C +C +R K+V I C HL CS C+ + + CP C Sbjct: 350 CKICAERDKDVRIEPCGHLLCSCCLAAWQDSDSQTCPFC 388
>DTX3_MOUSE (Q80V91) Protein deltex-3 (Deltex-3) (Deltex3) (mDTX3)| Length = 347 Score = 37.4 bits (85), Expect = 0.043 Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 1/46 (2%) Frame = -2 Query: 498 CGVCFDRPKEV-VITKCFHLFCSTCIQRNLELRHRKCPGCGTPFGQ 364 C +C + + KC H FC CI R L+++ + CP CG +GQ Sbjct: 164 CPICLGEIQNAKTLEKCRHSFCEGCITRALQVK-KACPMCGRFYGQ 208
>TRI10_PANTR (Q7YR32) Tripartite motif protein 10 (RING finger protein 9)| (B30-RING finger protein) Length = 481 Score = 37.4 bits (85), Expect = 0.043 Identities = 27/102 (26%), Positives = 39/102 (38%), Gaps = 6/102 (5%) Frame = -2 Query: 552 ATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLEL------RHRKC 391 A++ L DE+ C +C +E V C H FC C+ R E+ C Sbjct: 5 ASVTSLADEVN-------CPICQGTLREPVTIDCGHNFCRACLTRYCEIPGPDLEESPTC 57 Query: 390 PGCGTPFGQNDVREVKI*SPSDAGLDDLVVFGTLGQHQPDRC 265 P C PF R + ++ L + TLG + D C Sbjct: 58 PLCKEPFRPGSFRPNWQLANVVENIERLQLVSTLGLGEEDVC 99
>TRI10_HUMAN (Q9UDY6) Tripartite motif protein 10 (RING finger protein 9)| (B30-RING finger protein) Length = 481 Score = 37.4 bits (85), Expect = 0.043 Identities = 27/102 (26%), Positives = 39/102 (38%), Gaps = 6/102 (5%) Frame = -2 Query: 552 ATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLEL------RHRKC 391 A++ L DE+ C +C +E V C H FC C+ R E+ C Sbjct: 5 ASVTSLADEVN-------CPICQGTLREPVTIDCGHNFCRACLTRYCEIPGPDLEESPTC 57 Query: 390 PGCGTPFGQNDVREVKI*SPSDAGLDDLVVFGTLGQHQPDRC 265 P C PF R + ++ L + TLG + D C Sbjct: 58 PLCKEPFRPGSFRPNWQLANVVENIERLQLVSTLGLGEEDVC 99
>ZEF2_IRV6 (P40629) Zinc finger protein| Length = 145 Score = 37.4 bits (85), Expect = 0.043 Identities = 18/74 (24%), Positives = 33/74 (44%), Gaps = 9/74 (12%) Frame = -2 Query: 567 SENEEATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHL-FCSTC--------IQRN 415 ++NE+ +++D++ L C +C +++ C HL C+ C R Sbjct: 62 NQNEKEKFNQVEDKLTTLSKNLTCIICLTNQVQILTIPCGHLIMCNPCSLNLNNSVCTRG 121 Query: 414 LELRHRKCPGCGTP 373 + + KCP C TP Sbjct: 122 VNSNYEKCPKCRTP 135
>TRI39_HUMAN (Q9HCM9) Tripartite motif protein 39 (RING finger protein 23)| (Testis-abundant finger protein) Length = 518 Score = 37.0 bits (84), Expect = 0.056 Identities = 20/42 (47%), Positives = 23/42 (54%), Gaps = 3/42 (7%) Frame = -2 Query: 498 CGVCFDRPKEVVITKCFHLFCSTCIQR---NLELRHRKCPGC 382 C VC + KE VI +C H FC CI R +LE R CP C Sbjct: 29 CSVCLEYLKEPVIIECGHNFCKACITRWWEDLE-RDFPCPVC 69
>TRI39_RAT (Q6MFZ5) Tripartite motif protein 39 (RING finger protein 23)| Length = 488 Score = 37.0 bits (84), Expect = 0.056 Identities = 20/42 (47%), Positives = 23/42 (54%), Gaps = 3/42 (7%) Frame = -2 Query: 498 CGVCFDRPKEVVITKCFHLFCSTCIQR---NLELRHRKCPGC 382 C VC + KE VI +C H FC CI R +LE R CP C Sbjct: 29 CSVCLEYLKEPVIIECGHNFCKACITRWWEDLE-RDFPCPVC 69
>TRI39_MOUSE (Q9ESN2) Tripartite motif protein 39 (RING finger protein 23)| (Testis-abundant finger protein) Length = 488 Score = 37.0 bits (84), Expect = 0.056 Identities = 20/42 (47%), Positives = 23/42 (54%), Gaps = 3/42 (7%) Frame = -2 Query: 498 CGVCFDRPKEVVITKCFHLFCSTCIQR---NLELRHRKCPGC 382 C VC + KE VI +C H FC CI R +LE R CP C Sbjct: 29 CSVCLEYLKEPVIIECGHNFCKACITRWWEDLE-RDFPCPVC 69
>BIRC7_HUMAN (Q96CA5) Baculoviral IAP repeat-containing protein 7 (Kidney| inhibitor of apoptosis protein) (KIAP) (Melanoma inhibitor of apoptosis protein) (ML-IAP) (Livin) Length = 298 Score = 37.0 bits (84), Expect = 0.056 Identities = 22/61 (36%), Positives = 29/61 (47%) Frame = -2 Query: 555 EATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGCGT 376 EA +++LQ+E C VC DR +V C HL C+ C L+L CP C Sbjct: 240 EAQLRRLQEE-------RTCKVCLDRAVSIVFVPCGHLVCAECAP-GLQL----CPICRA 287 Query: 375 P 373 P Sbjct: 288 P 288
>TRI26_PIG (O77666) Tripartite motif protein 26 (Zinc finger protein 173)| Length = 545 Score = 36.6 bits (83), Expect = 0.073 Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 2/71 (2%) Frame = -2 Query: 552 ATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQ--RNLELRHRKCPGCG 379 A ++ L++E+ C +C D ++ V C H+FC +C + CP C Sbjct: 5 APLRSLEEEVT-------CSICLDYLRDPVTIDCGHVFCRSCTTDIHPVSGGRPVCPLCK 57 Query: 378 TPFGQNDVREV 346 PF + ++R V Sbjct: 58 KPFTKENIRPV 68
>RAG1_CHICK (P24271) V(D)J recombination-activating protein 1 (RAG-1)| Length = 1041 Score = 36.6 bits (83), Expect = 0.073 Identities = 17/50 (34%), Positives = 23/50 (46%) Frame = -2 Query: 504 LKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGCGTPFGQNDV 355 + C +C + V T C HLFC TCI + + CP C P D+ Sbjct: 287 ISCQICEHILADPVETTCRHLFCRTCILSCIRVMGCYCPSCWYPCFPTDL 336
>MIB_DROME (Q9VUX2) Ubiquitin ligase protein mind-bomb (EC 6.3.2.-) (Mind bomb| homolog) (D-mib) Length = 1226 Score = 36.6 bits (83), Expect = 0.073 Identities = 17/40 (42%), Positives = 23/40 (57%) Frame = -2 Query: 546 IQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTC 427 +QKL+ +++D K C VCFDR K +V C H C C Sbjct: 1167 VQKLKQQLQDIKEQTMCPVCFDRIKNMVFL-CGHGTCQMC 1205
>CBL_HUMAN (P22681) E3 ubiquitin-protein ligase CBL (EC 6.3.2.-) (Signal| transduction protein CBL) (Proto-oncogene c-CBL) (Casitas B-lineage lymphoma proto-oncogene) (RING finger protein 55) Length = 906 Score = 36.6 bits (83), Expect = 0.073 Identities = 14/39 (35%), Positives = 21/39 (53%) Frame = -2 Query: 498 CGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 382 C +C + K+V I C HL C++C+ E + CP C Sbjct: 381 CKICAENDKDVKIEPCGHLMCTSCLTSWQESEGQGCPFC 419
>CBL_MOUSE (P22682) E3 ubiquitin-protein ligase CBL (EC 6.3.2.-) (Signal| transduction protein CBL) (Proto-oncogene c-CBL) (Casitas B-lineage lymphoma proto-oncogene) Length = 913 Score = 36.6 bits (83), Expect = 0.073 Identities = 14/39 (35%), Positives = 21/39 (53%) Frame = -2 Query: 498 CGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 382 C +C + K+V I C HL C++C+ E + CP C Sbjct: 379 CKICAENDKDVKIEPCGHLMCTSCLTSWQESEGQGCPFC 417
>YNN1_CAEEL (Q03605) Hypothetical RING finger protein T02C1.1 in chromosome III| Length = 160 Score = 36.6 bits (83), Expect = 0.073 Identities = 19/49 (38%), Positives = 26/49 (53%) Frame = -2 Query: 498 CGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGCGTPFGQNDVR 352 C VC D E I +C H +C CI+ +L + + KCP C G N +R Sbjct: 8 CAVCLDFFVEPCIIECGHSYCRFCIESHLNI-NEKCPLCRAHTG-NPIR 54
>TRIM2_MOUSE (Q9ESN6) Tripartite motif protein 2 (Neural activity-related RING| finger protein) Length = 744 Score = 36.2 bits (82), Expect = 0.096 Identities = 15/46 (32%), Positives = 20/46 (43%), Gaps = 2/46 (4%) Frame = -2 Query: 513 KAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRH--RKCPGC 382 K L C +C +R K + C H FC C+Q + CP C Sbjct: 18 KQFLICSICLERYKNPKVLPCLHTFCERCLQNYIPAHSLTLSCPVC 63
>TRIM2_HUMAN (Q9C040) Tripartite motif protein 2 (RING finger protein 86)| Length = 744 Score = 36.2 bits (82), Expect = 0.096 Identities = 15/46 (32%), Positives = 20/46 (43%), Gaps = 2/46 (4%) Frame = -2 Query: 513 KAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRH--RKCPGC 382 K L C +C +R K + C H FC C+Q + CP C Sbjct: 18 KQFLICSICLERYKNPKVLPCLHTFCERCLQNYIPAHSLTLSCPVC 63
>PRT1_ARATH (Q8LBL5) Ubiquitin protein ligase PRT1 (EC 6.3.2.-) (Proteolysis 1| protein) Length = 410 Score = 36.2 bits (82), Expect = 0.096 Identities = 17/68 (25%), Positives = 33/68 (48%), Gaps = 1/68 (1%) Frame = -2 Query: 570 TSENEEATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLE-LRHRK 394 T +N+E+ +++ D+ C VC + + ++ C HL C C+ +++ R Sbjct: 9 TMKNDESQEEEIPDQFLCC-------VCLELLYKPIVLSCGHLSCFWCVHKSMNGFRESH 61 Query: 393 CPGCGTPF 370 CP C P+ Sbjct: 62 CPICRDPY 69
>TRI10_PIG (O19085) Tripartite motif protein 10 (RING finger protein 9)| (B30-RING finger protein) Length = 482 Score = 36.2 bits (82), Expect = 0.096 Identities = 22/73 (30%), Positives = 29/73 (39%), Gaps = 6/73 (8%) Frame = -2 Query: 552 ATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLEL------RHRKC 391 A++ L DE+ C +C +E V C H FC C+ R LE+ C Sbjct: 5 ASVSSLADEVN-------CPICQGTLREPVTIDCGHNFCCVCLTRYLEIPCLDPGELPTC 57 Query: 390 PGCGTPFGQNDVR 352 P C PF R Sbjct: 58 PLCKEPFRPGSFR 70
>TRI25_MOUSE (Q61510) Tripartite motif protein 25 (Zinc finger protein 147)| (Estrogen-responsive finger protein) (Efp) Length = 634 Score = 36.2 bits (82), Expect = 0.096 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 2/43 (4%) Frame = -2 Query: 504 LKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELR--HRKCPGC 382 L C VC + KE V T C H FC++C+ ++ +CP C Sbjct: 11 LSCSVCLELFKEPVTTPCGHNFCTSCLDETWVVQGPPYRCPQC 53
>CBLB_XENTR (Q6DFR2) E3 ubiquitin-protein ligase CBL-B (EC 6.3.2.-) (Signal| transduction protein CBL-B) (SH3-binding protein CBL-B) Length = 982 Score = 35.8 bits (81), Expect = 0.12 Identities = 14/39 (35%), Positives = 21/39 (53%) Frame = -2 Query: 498 CGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 382 C +C + K+V I C HL C++C+ E + CP C Sbjct: 384 CKICAENDKDVKIEPCGHLMCTSCLTSWQESDGQGCPFC 422
>CBLB_MOUSE (Q3TTA7) E3 ubiquitin-protein ligase CBL-B (EC 6.3.2.-) (Signal| transduction protein CBL-B) (SH3-binding protein CBL-B) (Casitas B-lineage lymphoma proto-oncogene b) Length = 982 Score = 35.8 bits (81), Expect = 0.12 Identities = 14/39 (35%), Positives = 21/39 (53%) Frame = -2 Query: 498 CGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 382 C +C + K+V I C HL C++C+ E + CP C Sbjct: 373 CKICAENDKDVKIEPCGHLMCTSCLTAWQESDGQGCPFC 411
>CBLB_HUMAN (Q13191) E3 ubiquitin-protein ligase CBL-B (EC 6.3.2.-) (Signal| transduction protein CBL-B) (SH3-binding protein CBL-B) (Casitas B-lineage lymphoma proto-oncogene b) (RING finger protein 56) Length = 982 Score = 35.8 bits (81), Expect = 0.12 Identities = 14/39 (35%), Positives = 21/39 (53%) Frame = -2 Query: 498 CGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 382 C +C + K+V I C HL C++C+ E + CP C Sbjct: 373 CKICAENDKDVKIEPCGHLMCTSCLTAWQESDGQGCPFC 411
>CBLBA_XENLA (Q6GQL0) E3 ubiquitin-protein ligase CBL-B-A (EC 6.3.2.-) (Signal| transduction protein CBL-B-A) (SH3-binding protein CBL-B-A) Length = 918 Score = 35.8 bits (81), Expect = 0.12 Identities = 14/39 (35%), Positives = 21/39 (53%) Frame = -2 Query: 498 CGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 382 C +C + K+V I C HL C++C+ E + CP C Sbjct: 384 CKICAENDKDVKIEPCGHLMCTSCLTSWQESDGQGCPFC 422
>TRAF6_HUMAN (Q9Y4K3) TNF receptor-associated factor 6 (Interleukin 1 signal| transducer) (RING finger protein 85) Length = 522 Score = 35.8 bits (81), Expect = 0.12 Identities = 14/38 (36%), Positives = 20/38 (52%) Frame = -2 Query: 501 KCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCP 388 +C +C +E V T C H FC CI +++ KCP Sbjct: 69 ECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCP 106
>PEX10_ARATH (Q9SYU4) Peroxisome assembly protein 10 (Peroxin-10) (AthPEX10)| (Pex10p) (PER8) Length = 381 Score = 35.8 bits (81), Expect = 0.12 Identities = 16/47 (34%), Positives = 24/47 (51%) Frame = -2 Query: 513 KAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGCGTP 373 +A+ KC +C + T C H+FC +CI ++CP C TP Sbjct: 322 EAVGKCTLCLSTRQHPTATPCGHVFCWSCIMEWCN-EKQECPLCRTP 367
>TRAF6_MOUSE (P70196) TNF receptor-associated factor 6| Length = 530 Score = 35.8 bits (81), Expect = 0.12 Identities = 14/38 (36%), Positives = 20/38 (52%) Frame = -2 Query: 501 KCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCP 388 +C +C +E V T C H FC CI +++ KCP Sbjct: 69 ECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCP 106
>RAD16_YEAST (P31244) DNA repair protein RAD16 (EC 3.6.1.-) (ATP-dependent| helicase RAD16) Length = 790 Score = 35.8 bits (81), Expect = 0.12 Identities = 14/53 (26%), Positives = 30/53 (56%) Frame = -2 Query: 567 SENEEATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLE 409 +++ + +++L + D ++ C +C D +E + +KC H FC CI+ +E Sbjct: 514 ADHPDLVLKRLNNFPGDDIGVVICQLCNDEAEEPIESKCHHKFCRLCIKEYVE 566
>RAD5_CANGA (Q6FY76) DNA repair protein RAD5 (EC 3.6.1.-)| Length = 1151 Score = 35.8 bits (81), Expect = 0.12 Identities = 20/73 (27%), Positives = 37/73 (50%), Gaps = 12/73 (16%) Frame = -2 Query: 564 ENEEAT--IQKLQDEIKDCKAIL--KCGVCFDRPKE---VVITKCFHLFCSTCIQ----- 421 EN+E I+ ++ + D ++ +C +C P E V+T+C H+FC C++ Sbjct: 871 ENDELDKLIESVEAKFIDSNQLIPVECSICTAEPIESSSAVVTECEHVFCKECLEEYGNF 930 Query: 420 RNLELRHRKCPGC 382 + + +KCP C Sbjct: 931 QKEKSLQQKCPNC 943
>CWC24_ASPFU (Q4WUA0) Pre-mRNA-splicing factor cwc24| Length = 339 Score = 35.8 bits (81), Expect = 0.12 Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 5/55 (9%) Frame = -2 Query: 531 DEIKDCKAILK-----CGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 382 DE D + +L+ C +C K ++TKC H FC +C + R+RK P C Sbjct: 237 DEDDDDEELLESIPFACIICKSSYKSPIVTKCGHYFCESCALQ----RYRKNPSC 287
>CBLBB_XENLA (Q6NRE7) E3 ubiquitin-protein ligase CBL-B-B (EC 6.3.2.-) (Signal| transduction protein CBL-B-B) (SH3-binding protein CBL-B-B) Length = 764 Score = 35.8 bits (81), Expect = 0.12 Identities = 14/39 (35%), Positives = 21/39 (53%) Frame = -2 Query: 498 CGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 382 C +C + K+V I C HL C++C+ E + CP C Sbjct: 386 CKICAENDKDVKIEPCGHLMCTSCLTSWQESDGQGCPFC 424
>CBLB_RAT (Q8K4S7) E3 ubiquitin-protein ligase CBL-B (EC 6.3.2.-) (Signal| transduction protein CBL-B) (SH3-binding protein CBL-B) (Casitas B-lineage lymphoma proto-oncogene b) Length = 938 Score = 35.8 bits (81), Expect = 0.12 Identities = 14/39 (35%), Positives = 21/39 (53%) Frame = -2 Query: 498 CGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 382 C +C + K+V I C HL C++C+ E + CP C Sbjct: 373 CKICAENDKDVKIEPCGHLMCTSCLTAWQESDGQGCPFC 411
>CM007_MOUSE (Q8K2Y0) Protein C13orf7 homolog| Length = 722 Score = 35.4 bits (80), Expect = 0.16 Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 1/54 (1%) Frame = -2 Query: 504 LKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGCGTPF-GQNDVREV 346 + C +C + ++ V+ H+FCS CI L+ + +CP C P +N +E+ Sbjct: 16 ITCHICLGKVRQPVVCTNNHVFCSICIDLWLK-NNSQCPACRVPITPENPCKEI 68
>TRIM3_HUMAN (O75382) Tripartite motif protein 3 (RING finger protein 22)| (Brain-expressed RING finger protein) (RING finger protein 97) Length = 744 Score = 35.4 bits (80), Expect = 0.16 Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 2/46 (4%) Frame = -2 Query: 513 KAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRH--RKCPGC 382 K L C +C DR + + C H FC C+Q + + CP C Sbjct: 17 KQFLVCSICLDRYQCPKVLPCLHTFCERCLQNYIPAQSLTLSCPVC 62
>BRAP_HUMAN (Q7Z569) BRCA1-associated protein (EC 6.3.2.-) (BRAP2) (Impedes| mitogenic signal propagation) (IMP) (RING finger protein 52) (NY-REN-63 antigen) Length = 592 Score = 35.4 bits (80), Expect = 0.16 Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 8/70 (11%) Frame = -2 Query: 558 EEATIQKLQD----EIKDCKAILKCGVCFDRPKE----VVITKCFHLFCSTCIQRNLELR 403 E A + K +D + D + KC VC +R E ++ T C H F S C+QR + Sbjct: 240 ERAEVLKSEDGASLPVMDLTELPKCTVCLERMDESVNGILTTLCNHSFHSQCLQRWDDTT 299 Query: 402 HRKCPGCGTP 373 C C TP Sbjct: 300 CPVCRYCQTP 309
>RN141_RAT (Q6IV57) RING finger protein 141| Length = 230 Score = 35.4 bits (80), Expect = 0.16 Identities = 15/40 (37%), Positives = 23/40 (57%) Frame = -2 Query: 501 KCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 382 +C +C D ++++ C H FC CI + + RHR CP C Sbjct: 154 ECCICMDGRADLILP-CAHSFCQKCIDKWSD-RHRNCPIC 191
>RN141_PONPY (Q5R7K8) RING finger protein 141| Length = 230 Score = 35.4 bits (80), Expect = 0.16 Identities = 15/40 (37%), Positives = 23/40 (57%) Frame = -2 Query: 501 KCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 382 +C +C D ++++ C H FC CI + + RHR CP C Sbjct: 154 ECCICMDGRADLILP-CAHSFCQKCIDKWSD-RHRNCPIC 191
>RN141_MOUSE (Q99MB7) RING finger protein 141 (Zinc finger protein 230)| Length = 230 Score = 35.4 bits (80), Expect = 0.16 Identities = 15/40 (37%), Positives = 23/40 (57%) Frame = -2 Query: 501 KCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 382 +C +C D ++++ C H FC CI + + RHR CP C Sbjct: 154 ECCICMDGRADLILP-CAHSFCQKCIDKWSD-RHRNCPIC 191
>RN141_HUMAN (Q8WVD5) RING finger protein 141 (Zinc finger protein 230)| Length = 230 Score = 35.4 bits (80), Expect = 0.16 Identities = 15/40 (37%), Positives = 23/40 (57%) Frame = -2 Query: 501 KCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 382 +C +C D ++++ C H FC CI + + RHR CP C Sbjct: 154 ECCICMDGRADLILP-CAHSFCQKCIDKWSD-RHRNCPIC 191
>RN141_CHICK (Q5ZM74) RING finger protein 141| Length = 230 Score = 35.4 bits (80), Expect = 0.16 Identities = 15/40 (37%), Positives = 23/40 (57%) Frame = -2 Query: 501 KCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 382 +C +C D ++++ C H FC CI + + RHR CP C Sbjct: 154 ECCICMDGRVDLILP-CAHSFCQKCIDKWSD-RHRSCPVC 191
>CWC24_USTMA (Q4P400) Pre-mRNA-splicing factor CWC24| Length = 355 Score = 35.4 bits (80), Expect = 0.16 Identities = 18/68 (26%), Positives = 30/68 (44%) Frame = -2 Query: 570 TSENEEATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKC 391 +S E + +D + C +C + V+T+C H FCS+C + ++ KC Sbjct: 240 SSRTRENMLSDPEDSDTEDDIPFACLICRKAFTDPVVTRCAHYFCSSCAIKRF-AKNSKC 298 Query: 390 PGCGTPFG 367 CG G Sbjct: 299 FACGQQTG 306
>BRAP_MOUSE (Q99MP8) BRCA1-associated protein (EC 6.3.2.-) (BRAP2) (Impedes| mitogenic signal propagation) (IMP) Length = 591 Score = 35.4 bits (80), Expect = 0.16 Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 8/70 (11%) Frame = -2 Query: 558 EEATIQKLQD----EIKDCKAILKCGVCFDRPKE----VVITKCFHLFCSTCIQRNLELR 403 E A + K +D + D + KC VC +R E ++ T C H F S C+QR + Sbjct: 239 ERAEVLKSEDGASLPVMDLTELPKCTVCLERMDESVNGILTTLCNHSFHSQCLQRWDDTT 298 Query: 402 HRKCPGCGTP 373 C C TP Sbjct: 299 CPVCRYCQTP 308
>TRIM3_RAT (O70277) Tripartite motif protein 3 (RING finger protein 22)| (Brain-expressed RING finger protein) Length = 744 Score = 35.0 bits (79), Expect = 0.21 Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 2/46 (4%) Frame = -2 Query: 513 KAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNL--ELRHRKCPGC 382 K L C +C DR + + C H FC C+Q + + CP C Sbjct: 17 KQFLVCSICLDRYRCPKVLPCLHTFCERCLQNYIPPQSLTLSCPVC 62
>TRIM3_MOUSE (Q9R1R2) Tripartite motif protein 3 (RING finger protein 22) (RING| finger protein HAC1) Length = 744 Score = 35.0 bits (79), Expect = 0.21 Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 2/46 (4%) Frame = -2 Query: 513 KAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNL--ELRHRKCPGC 382 K L C +C DR + + C H FC C+Q + + CP C Sbjct: 17 KQFLVCSICLDRYRCPKVLPCLHTFCERCLQNYIPPQSLTLSCPVC 62
>RAD5_ASHGO (Q753V5) DNA repair protein RAD5 (EC 3.6.1.-)| Length = 1085 Score = 35.0 bits (79), Expect = 0.21 Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 9/59 (15%) Frame = -2 Query: 531 DEIKDCKAILKCGVC----FDRPKEVVITKCFHLFCSTCIQRNLELRHRK-----CPGC 382 D +KD L+C +C VV T+C H FC +C+ ++ +++K CP C Sbjct: 825 DALKD----LECSICTCEAISPLTSVVFTRCGHPFCESCLLEYIQFQNKKGSETICPNC 879
>TRI35_MOUSE (Q8C006) Tripartite motif protein 35 (Macrophage-derived| apoptosis-inducing RBCC protein) (MAIR protein) (Nc8 protein) (Hemopoeitic lineage switch protein 5) Length = 501 Score = 35.0 bits (79), Expect = 0.21 Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 1/45 (2%) Frame = -2 Query: 513 KAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHR-KCPGC 382 K L C VC+D ++ V +C H FC C+ E++ CP C Sbjct: 16 KEELLCAVCYDPFRDAVTLRCGHNFCRRCVSGCWEVQTTPSCPVC 60
>RN125_MOUSE (Q9D9R0) RING finger protein 125 (EC 6.3.2.-)| Length = 232 Score = 35.0 bits (79), Expect = 0.21 Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 1/40 (2%) Frame = -2 Query: 498 CGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHR-KCPGC 382 C VC + + V T+C H+FC +CI +++ ++ CP C Sbjct: 36 CSVCLEVLHQPVRTRCGHVFCRSCIATSIKNNNKWTCPYC 75
>CWC24_ASHGO (Q752S4) Pre-mRNA-splicing factor CWC24| Length = 250 Score = 35.0 bits (79), Expect = 0.21 Identities = 27/89 (30%), Positives = 39/89 (43%), Gaps = 1/89 (1%) Frame = -2 Query: 534 QDEIKDCKAI-LKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGCGTPFGQND 358 Q E +D +I +C +C + V T+C H FC C R + R+C CG D Sbjct: 145 QTEARDLDSIPFRCVLCRGHYRAPVRTRCGHYFCGGCFARRVR-ETRQCAVCGA-----D 198 Query: 357 VREVKI*SPSDAGLDDLVVFGTLGQHQPD 271 + V + S A L +L+ G PD Sbjct: 199 TQGV---AQSAARLRELLAAGAGAGDSPD 224
>TRI25_HUMAN (Q14258) Tripartite motif protein 25 (Zinc finger protein 147)| (Estrogen-responsive finger protein) (Efp) (RING finger protein 147) Length = 630 Score = 35.0 bits (79), Expect = 0.21 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 2/43 (4%) Frame = -2 Query: 504 LKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRK--CPGC 382 L C +C + KE V T C H FC +C+ ++ CP C Sbjct: 11 LSCSICLEPFKEPVTTPCGHNFCGSCLNETWAVQGSPYLCPQC 53
>TRI31_HUMAN (Q9BZY9) Tripartite motif protein 31| Length = 425 Score = 35.0 bits (79), Expect = 0.21 Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 2/67 (2%) Frame = -2 Query: 546 IQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQR--NLELRHRKCPGCGTP 373 + KLQ+E+ C +C D ++ V C H FC CI + KCP C T Sbjct: 7 VNKLQEEVI-------CPICLDILQKPVTIDCGHNFCLKCITQIGETSCGFFKCPLCKTS 59 Query: 372 FGQNDVR 352 +N +R Sbjct: 60 VRKNAIR 66
>CM007_PONPY (Q5RD97) Protein C13orf7 homolog| Length = 726 Score = 35.0 bits (79), Expect = 0.21 Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 1/54 (1%) Frame = -2 Query: 504 LKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGCGTPF-GQNDVREV 346 + C +C + ++ VI H+FCS CI L+ + +CP C P +N +E+ Sbjct: 16 ITCHICLGKVRQPVICINNHVFCSICIDLWLK-NNSQCPACRVPITPENPCKEI 68
>CM007_HUMAN (Q5W0B1) Protein C13orf7| Length = 726 Score = 35.0 bits (79), Expect = 0.21 Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 1/54 (1%) Frame = -2 Query: 504 LKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGCGTPF-GQNDVREV 346 + C +C + ++ VI H+FCS CI L+ + +CP C P +N +E+ Sbjct: 16 ITCHICLGKVRQPVICINNHVFCSICIDLWLK-NNSQCPACRVPITPENPCKEI 68
>TRI17_HUMAN (Q9Y577) Tripartite motif protein 17 (Testis RING finger protein)| (RING finger protein 16) Length = 477 Score = 34.7 bits (78), Expect = 0.28 Identities = 23/65 (35%), Positives = 29/65 (44%), Gaps = 11/65 (16%) Frame = -2 Query: 543 QKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLE-------LRHRK--- 394 +KLQ+E C +C D + V+T C H FC CIQ + E R RK Sbjct: 8 RKLQEEAT-------CSICLDYFTDPVMTTCGHNFCRACIQLSWEKARGKKGRRKRKGSF 60 Query: 393 -CPGC 382 CP C Sbjct: 61 PCPEC 65
>YEU6_YEAST (P40072) Hypothetical 30.8 kDa protein in SPR6-RPL23B intergenic| region Length = 274 Score = 34.7 bits (78), Expect = 0.28 Identities = 10/26 (38%), Positives = 18/26 (69%) Frame = -2 Query: 501 KCGVCFDRPKEVVITKCFHLFCSTCI 424 +C +CF+ P+ ++T C H+FC C+ Sbjct: 205 RCPICFEPPETALMTLCGHVFCCPCL 230
>TRIM4_HUMAN (Q9C037) Tripartite motif protein 4 (RING finger protein 87)| Length = 500 Score = 34.7 bits (78), Expect = 0.28 Identities = 19/62 (30%), Positives = 26/62 (41%), Gaps = 10/62 (16%) Frame = -2 Query: 528 EIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNL----------ELRHRKCPGCG 379 E +D + L C +C D ++ V +C H FC C+ RN E RH P Sbjct: 2 EAEDIQEELTCPICLDYFQDPVSIECGHNFCRGCLHRNWAPGGGPFPCPECRHPSAPAAL 61 Query: 378 TP 373 P Sbjct: 62 RP 63
>DTX3L_HUMAN (Q8TDB6) Protein deltex 3-like protein (B-lymphoma- and| BAL-associated protein) (Rhysin-2) (Rhysin2) Length = 740 Score = 34.7 bits (78), Expect = 0.28 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%) Frame = -2 Query: 498 CGVCFDR-PKEVVITKCFHLFCSTCIQRNLELRHRKCPGCGTPFG 367 C +C D + V+ KC H FC+ CI + + + CP C T +G Sbjct: 561 CVICMDTISNKKVLPKCKHEFCAPCINKAMSYK-PICPTCQTSYG 604
>RNF26_HUMAN (Q9BY78) RING finger protein 26| Length = 433 Score = 34.3 bits (77), Expect = 0.36 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 3/51 (5%) Frame = -2 Query: 525 IKDCKAILKCGVCFDRPKEVVITKCFHL-FCSTC--IQRNLELRHRKCPGC 382 +K+ + KC +C D+ K V++ C HL C C I + HR CP C Sbjct: 371 LKEQEERKKCVICQDQSKTVLLLPCRHLCLCQACTEILMRHPVYHRNCPLC 421
>YWZ6_CAEEL (Q11096) Hypothetical RING finger protein C02B8.6 in chromosome X| Length = 347 Score = 34.3 bits (77), Expect = 0.36 Identities = 14/43 (32%), Positives = 20/43 (46%) Frame = -2 Query: 498 CGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGCGTPF 370 C +C + P V C H FC CI+ +++ C C PF Sbjct: 5 CTICHNTPNRPVRLDCNHEFCYICIKGSIQNDMLNCAVCRRPF 47
>CBLC_HUMAN (Q9ULV8) Signal transduction protein CBL-C (SH3-binding protein| CBL-C) (CBL-3) (RING finger protein 57) Length = 474 Score = 34.3 bits (77), Expect = 0.36 Identities = 14/39 (35%), Positives = 19/39 (48%) Frame = -2 Query: 498 CGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 382 C +C + K+V I C HL CS C+ + CP C Sbjct: 351 CKICAESNKDVKIEPCGHLLCSCCLAAWQHSDSQTCPFC 389
>TRI37_HUMAN (O94972) Tripartite motif protein 37 (Mulibrey nanism protein)| Length = 964 Score = 34.3 bits (77), Expect = 0.36 Identities = 13/55 (23%), Positives = 28/55 (50%), Gaps = 1/55 (1%) Frame = -2 Query: 534 QDEIKDCKAILKCGVCFDRPKEV-VITKCFHLFCSTCIQRNLELRHRKCPGCGTP 373 + ++ + +C +C ++ ++ + C L C +CI+R L + +CP C P Sbjct: 3 EQSVESIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAP 57
>CWC24_YEAST (P53769) Pre-mRNA-splicing factor CWC24 (Complexed with CEF1| protein 24) Length = 259 Score = 34.3 bits (77), Expect = 0.36 Identities = 15/44 (34%), Positives = 24/44 (54%) Frame = -2 Query: 513 KAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 382 K KC +C + K V+T C H FC +C ++++ + KC C Sbjct: 194 KIPFKCTLCKEDYKSPVVTNCGHYFCGSCFAKDMK-KGTKCFIC 236
>TRI37_MOUSE (Q6PCX9) Tripartite motif protein 37| Length = 961 Score = 34.3 bits (77), Expect = 0.36 Identities = 13/55 (23%), Positives = 28/55 (50%), Gaps = 1/55 (1%) Frame = -2 Query: 534 QDEIKDCKAILKCGVCFDRPKEV-VITKCFHLFCSTCIQRNLELRHRKCPGCGTP 373 + ++ + +C +C ++ ++ + C L C +CI+R L + +CP C P Sbjct: 3 EQSVESIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAP 57
>TRI17_RAT (Q9WV59) Tripartite motif protein 17 (Testis RING finger protein)| Length = 477 Score = 33.9 bits (76), Expect = 0.47 Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 11/60 (18%) Frame = -2 Query: 498 CGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRK-----------CPGCGTPFGQNDVR 352 C +C D + V+T C H FC CIQ + E K CP C Q ++R Sbjct: 16 CSICLDYFTDPVMTACGHNFCRECIQMSWEKGKGKKGKKKQKGSFPCPECREMSPQRNLR 75
>COP1_PEA (P93471) Ubiquitin ligase protein COP1 (EC 6.3.2.-) (Constitutive| photomorphogenesis protein 1) Length = 672 Score = 33.9 bits (76), Expect = 0.47 Identities = 15/40 (37%), Positives = 19/40 (47%) Frame = -2 Query: 498 CGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGCG 379 C +C K+ +T C H FC CI +L CP CG Sbjct: 47 CPICMQIIKDAFLTACGHSFCYMCIITHLR-NKSDCPCCG 85
>TRI50_RAT (Q810I1) Tripartite motif protein 50| Length = 483 Score = 33.9 bits (76), Expect = 0.47 Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 2/60 (3%) Frame = -2 Query: 555 EATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLEL--RHRKCPGC 382 + T+ +LQD+ L+C +C + KE ++ +C H +C C+ E +CP C Sbjct: 4 QLTVPELQDQ-------LQCPICLEVFKEPLMLQCGHSYCKNCLDSLSEHLDSELRCPVC 56
>RAD5_DEBHA (Q6BIP2) DNA repair protein RAD5 (EC 3.6.1.-)| Length = 1153 Score = 33.9 bits (76), Expect = 0.47 Identities = 13/61 (21%), Positives = 28/61 (45%), Gaps = 8/61 (13%) Frame = -2 Query: 501 KCGVCFDRP---KEVVITKCFHLFCSTCIQRNLELRHRK-----CPGCGTPFGQNDVREV 346 +C +C P E+ +T C H +C C+ + + + + CP C P + + ++ Sbjct: 915 ECSICTQSPIPLGEMALTPCGHAYCLNCVLEHFDFQEKNLQKPLCPNCREPISKYKIFKL 974 Query: 345 K 343 + Sbjct: 975 R 975
>MDM2_MOUSE (P23804) Ubiquitin-protein ligase E3 Mdm2 (EC 6.3.2.-) (p53-binding| protein Mdm2) (Oncoprotein Mdm2) (Double minute 2 protein) Length = 489 Score = 33.9 bits (76), Expect = 0.47 Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 13/76 (17%) Frame = -2 Query: 561 NEEATIQKLQDEIKD----------CKAILKCGVCFDRPKE--VVITKCFHLF-CSTCIQ 421 + + ++++L++E +D AI C +C RPK +V K HL C TC + Sbjct: 405 SSQESVKELKEETQDKDESVESSFSLNAIEPCVICQGRPKNGCIVHGKTGHLMSCFTCAK 464 Query: 420 RNLELRHRKCPGCGTP 373 + L+ R++ CP C P Sbjct: 465 K-LKKRNKPCPVCRQP 479
>RNF4_HUMAN (P78317) RING finger protein 4| Length = 190 Score = 33.9 bits (76), Expect = 0.47 Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 7/48 (14%) Frame = -2 Query: 504 LKCGVCFDRPKEVV-------ITKCFHLFCSTCIQRNLELRHRKCPGC 382 + C +C D E+V T+C H+FCS C++ +L+ CP C Sbjct: 130 VSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLK-NANTCPTC 176
>RN113_CAEEL (O17917) Putative RING finger protein 113 homolog| Length = 384 Score = 33.9 bits (76), Expect = 0.47 Identities = 13/39 (33%), Positives = 23/39 (58%) Frame = -2 Query: 498 CGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 382 C +C + + ++TKC H FC+ C ++ + + KCP C Sbjct: 241 CFICGNPFVDPIVTKCKHYFCTGCALKSFQ-KSSKCPIC 278
>RO52_MOUSE (Q62191) 52 kDa Ro protein (Sjoegren syndrome type A antigen)| (SS-A) (Ro(SS-A)) (52 kDa ribonucleoprotein autoantigen Ro/SS-A) (Tripartite motif protein 21) Length = 470 Score = 33.9 bits (76), Expect = 0.47 Identities = 18/72 (25%), Positives = 31/72 (43%) Frame = -2 Query: 567 SENEEATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCP 388 S + +++K+ +E+ C +C D E + +C H FC CI + CP Sbjct: 4 STTSKMSLEKMWEEVT-------CSICLDPMVEPMSIECGHCFCKECIFEVGKNGGSSCP 56 Query: 387 GCGTPFGQNDVR 352 C F ++R Sbjct: 57 ECRQQFLLRNLR 68
>RNF4_RAT (O88846) RING finger protein 4 (SNURF)| Length = 194 Score = 33.9 bits (76), Expect = 0.47 Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 7/48 (14%) Frame = -2 Query: 504 LKCGVCFDRPKEVV-------ITKCFHLFCSTCIQRNLELRHRKCPGC 382 + C +C D E+V T+C H+FCS C++ +L+ CP C Sbjct: 134 VSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLK-NANTCPTC 180
>RNF4_MOUSE (Q9QZS2) RING finger protein 4| Length = 194 Score = 33.9 bits (76), Expect = 0.47 Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 7/48 (14%) Frame = -2 Query: 504 LKCGVCFDRPKEVV-------ITKCFHLFCSTCIQRNLELRHRKCPGC 382 + C +C D E+V T+C H+FCS C++ +L+ CP C Sbjct: 134 VSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLK-NANTCPTC 180
>TRI17_MOUSE (Q7TPM3) Tripartite motif protein 17| Length = 477 Score = 33.5 bits (75), Expect = 0.62 Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 11/60 (18%) Frame = -2 Query: 498 CGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRK-----------CPGCGTPFGQNDVR 352 C +C D + V+T C H FC CIQ + E K CP C Q ++R Sbjct: 16 CSICLDYFTDPVMTACGHNFCRECIQMSWEKGKVKKGKKKQKGSFPCPECREMSPQRNLR 75
>IAP1_NPVAC (P41435) Apoptosis inhibitor 1 (IAP-1)| Length = 286 Score = 33.5 bits (75), Expect = 0.62 Identities = 18/52 (34%), Positives = 27/52 (51%) Frame = -2 Query: 537 LQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 382 L + D + +C VC +R ++ V+ C H FC C+Q L +KCP C Sbjct: 225 LNENADDIEEKYECKVCLERQRDAVLMPCRH-FC-VCVQCYFGL-DQKCPTC 273
>SYWM_CAEEL (P46579) Probable tryptophanyl-tRNA synthetase, mitochondrial (EC| 6.1.1.2) (Tryptophan--tRNA ligase) (TrpRS) Length = 650 Score = 33.5 bits (75), Expect = 0.62 Identities = 18/65 (27%), Positives = 27/65 (41%), Gaps = 7/65 (10%) Frame = -2 Query: 501 KCGVCFDRPKEVVITKCFHLFCSTCIQR-------NLELRHRKCPGCGTPFGQNDVREVK 343 +C +C + + C HLFC TCIQ + +CP C F D ++ Sbjct: 254 QCSICLENKNPSALF-CGHLFCWTCIQEHAVAATSSASTSSARCPQCRLEFQPRDPNNLR 312 Query: 342 I*SPS 328 + S S Sbjct: 313 LLSTS 317
>R113B_HUMAN (Q8IZP6) RING finger protein 113B (Zinc finger protein 183-like 1)| Length = 322 Score = 33.5 bits (75), Expect = 0.62 Identities = 19/66 (28%), Positives = 29/66 (43%) Frame = -2 Query: 564 ENEEATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPG 385 E+E + ++EI +C +C + V+TKC H FC +C + R C Sbjct: 239 EDENHEVGSEEEEIP-----FRCFICRQAFQNPVVTKCRHYFCESCALEHFRATPR-CYI 292 Query: 384 CGTPFG 367 C P G Sbjct: 293 CDQPTG 298
>ZN313_PIG (Q6J1I8) Zinc finger protein 313| Length = 228 Score = 33.5 bits (75), Expect = 0.62 Identities = 14/39 (35%), Positives = 21/39 (53%) Frame = -2 Query: 498 CGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 382 C VC + ++ V C H+FCS C+Q L+ + C C Sbjct: 29 CPVCLEVYEKPVQVPCGHVFCSACLQECLKPKKPVCGVC 67
>ZN313_PANTR (Q6J212) Zinc finger protein 313| Length = 228 Score = 33.5 bits (75), Expect = 0.62 Identities = 14/39 (35%), Positives = 21/39 (53%) Frame = -2 Query: 498 CGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 382 C VC + ++ V C H+FCS C+Q L+ + C C Sbjct: 29 CPVCLEVYEKPVQVPCGHVFCSACLQECLKPKKPVCGVC 67
>ZN313_HUMAN (Q9Y508) Zinc finger protein 313 (RING finger protein 114)| Length = 228 Score = 33.5 bits (75), Expect = 0.62 Identities = 14/39 (35%), Positives = 21/39 (53%) Frame = -2 Query: 498 CGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 382 C VC + ++ V C H+FCS C+Q L+ + C C Sbjct: 29 CPVCLEVYEKPVQVPCGHVFCSACLQECLKPKKPVCGVC 67
>ZN313_BOVIN (Q4U5R4) Zinc finger protein 313| Length = 230 Score = 33.5 bits (75), Expect = 0.62 Identities = 14/39 (35%), Positives = 21/39 (53%) Frame = -2 Query: 498 CGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 382 C VC + ++ V C H+FCS C+Q L+ + C C Sbjct: 31 CPVCLEVYEKPVQVPCGHVFCSACLQECLKPKKPVCGVC 69
>PCGF6_HUMAN (Q9BYE7) Polycomb group RING finger protein 6 (RING finger protein| 134) (Mel18 and Bmi1-like RING finger) Length = 352 Score = 33.5 bits (75), Expect = 0.62 Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Frame = -2 Query: 567 SENEEATIQKLQDEIKDCKAILKCGVCFDRPKEVV-ITKCFHLFCSTCIQRNLELRHRKC 391 SE+EE + L + + C +C + IT+C H FC +CI R+ +R C Sbjct: 117 SEDEEERLINLSE----LTPYILCSICKGYLIDATTITECLHTFCKSCIVRHFYYSNR-C 171 Query: 390 PGC 382 P C Sbjct: 172 PKC 174
>MAST2_MOUSE (Q60592) Microtubule-associated serine/threonine-protein kinase 2 (EC| 2.7.11.1) Length = 1734 Score = 33.5 bits (75), Expect = 0.62 Identities = 14/25 (56%), Positives = 17/25 (68%) Frame = -1 Query: 451 LPPVLLNLYPEEPRATPPEVPGLRH 377 +P +L NL PEE + PP VPGL H Sbjct: 1626 VPNLLKNLSPEEEKPQPPSVPGLTH 1650
>TRIM7_MOUSE (Q923T7) Tripartite motif protein 7 (Glycogenin-interacting| protein) Length = 510 Score = 33.1 bits (74), Expect = 0.81 Identities = 16/41 (39%), Positives = 20/41 (48%) Frame = -2 Query: 498 CGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGCGT 376 C +C + +E V +C H FC CI R E PG GT Sbjct: 29 CSICLEFFREPVSVECGHSFCRACIMRCWER-----PGAGT 64
>ZN313_RAT (Q6J2U6) Zinc finger protein 313| Length = 229 Score = 33.1 bits (74), Expect = 0.81 Identities = 14/39 (35%), Positives = 21/39 (53%) Frame = -2 Query: 498 CGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 382 C VC + ++ V C H+FCS C+Q L+ + C C Sbjct: 30 CPVCLEVFEKPVQVPCGHVFCSACLQECLKPKKPVCGVC 68
>ZN313_MOUSE (Q9ET26) Zinc finger protein 313| Length = 229 Score = 33.1 bits (74), Expect = 0.81 Identities = 14/39 (35%), Positives = 21/39 (53%) Frame = -2 Query: 498 CGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 382 C VC + ++ V C H+FCS C+Q L+ + C C Sbjct: 30 CPVCLEVFEKPVQVPCGHVFCSACLQECLKPKKPVCGVC 68
>CWC24_EMENI (Q5AVC5) Pre-mRNA-splicing factor cwc24| Length = 332 Score = 33.1 bits (74), Expect = 0.81 Identities = 14/39 (35%), Positives = 21/39 (53%) Frame = -2 Query: 498 CGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 382 C +C + ++TKC H FC +C + R+RK P C Sbjct: 241 CIICKKPYQNPIVTKCGHYFCESCALQ----RYRKNPSC 275
>PZRN4_HUMAN (Q6ZMN7) PDZ domain-containing RING finger protein 4 (Ligand of| Numb-protein X 4) (SEMACAP3-like protein) Length = 1036 Score = 33.1 bits (74), Expect = 0.81 Identities = 14/39 (35%), Positives = 24/39 (61%) Frame = -2 Query: 504 LKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCP 388 L+C +C +E + T C H+FC++C+ +R R+CP Sbjct: 16 LECKLCGQVLEEPLCTPCGHVFCASCL-LPWAVRRRRCP 53
>COP1_ARATH (P43254) Ubiquitin-protein ligase COP1 (EC 6.3.2.-) (Constitutive| photomorphogenesis protein 1) Length = 675 Score = 33.1 bits (74), Expect = 0.81 Identities = 16/50 (32%), Positives = 21/50 (42%) Frame = -2 Query: 504 LKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGCGTPFGQNDV 355 L C +C K+ +T C H FC CI +L CP C N + Sbjct: 50 LLCPICMQIIKDAFLTACGHSFCYMCIITHLR-NKSDCPCCSQHLTNNQL 98
>TRC8_DROME (Q7KRW1) Protein TRC8 homolog| Length = 809 Score = 32.7 bits (73), Expect = 1.1 Identities = 13/39 (33%), Positives = 21/39 (53%) Frame = -2 Query: 498 CGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 382 C +C+ IT+C H F C+++ L ++ R CP C Sbjct: 621 CAICYQEMYSAKITRCRHFFHGVCLRKWLYVQDR-CPLC 658
>RNF8_HUMAN (O76064) Ubiquitin ligase protein RNF8 (EC 6.3.2.-) (RING finger| protein 8) Length = 485 Score = 32.7 bits (73), Expect = 1.1 Identities = 16/41 (39%), Positives = 22/41 (53%) Frame = -2 Query: 504 LKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 382 L+C +C + E V C H FCS CI ++ R +CP C Sbjct: 401 LQCIICSEYFIEAVTLNCAHSFCSYCINEWMK-RKIECPIC 440
>PCGF2_MOUSE (P23798) Polycomb group RING finger protein 2 (DNA-binding protein| Mel-18) (RING finger protein 110) (Zinc finger protein 144) (Zfp-144) Length = 342 Score = 32.7 bits (73), Expect = 1.1 Identities = 14/27 (51%), Positives = 17/27 (62%) Frame = -2 Query: 462 ITKCFHLFCSTCIQRNLELRHRKCPGC 382 I +C H FC TCI R LE ++ CP C Sbjct: 31 IVECLHSFCKTCIVRYLE-TNKYCPMC 56
>TRI11_MOUSE (Q99PQ2) Tripartite motif protein 11 (EC 6.3.2.-)| Length = 467 Score = 32.7 bits (73), Expect = 1.1 Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 2/51 (3%) Frame = -2 Query: 498 CGVCFDRPKEVVITKCFHLFCSTCIQR--NLELRHRKCPGCGTPFGQNDVR 352 C +C D + V+T C H FC CI+R CP C Q ++R Sbjct: 16 CAICLDYFTDPVMTDCGHNFCRECIRRCWGQPEGPYACPECRELSAQRNLR 66
>TRAF7_MOUSE (Q922B6) E3 ubiquitin protein ligase TRAF7 (EC 6.3.2.-) (TNF| receptor-associated factor 7) Length = 594 Score = 32.7 bits (73), Expect = 1.1 Identities = 20/59 (33%), Positives = 25/59 (42%) Frame = -2 Query: 564 ENEEATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCP 388 E E + Q +K C C +C K+ VIT C H FC C L+ KCP Sbjct: 38 EEPEPLVFAEQPSVKLC-----CQLCCSVFKDPVITTCGHTFCRRC-----ALKSEKCP 86
>PCGF6_RAT (Q5XI70) Polycomb group RING finger protein 6 (RING finger protein| 134) Length = 351 Score = 32.7 bits (73), Expect = 1.1 Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Frame = -2 Query: 567 SENEEATIQKLQDEIKDCKAILKCGVCFDRPKEVV-ITKCFHLFCSTCIQRNLELRHRKC 391 SE+EE + L + + C +C + IT+C H FC +CI R+ +R C Sbjct: 116 SEDEEERLINLVE----LTPYILCSICKGYLIDATTITECLHTFCKSCIVRHFYYSNR-C 170 Query: 390 PGC 382 P C Sbjct: 171 PKC 173
>MDM2_HUMAN (Q00987) Ubiquitin-protein ligase E3 Mdm2 (EC 6.3.2.-) (p53-binding| protein Mdm2) (Oncoprotein Mdm2) (Double minute 2 protein) (Hdm2) Length = 491 Score = 32.7 bits (73), Expect = 1.1 Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 3/69 (4%) Frame = -2 Query: 570 TSENEEATIQKLQDEIKDCKAILKCGVCFDRPKE--VVITKCFHLF-CSTCIQRNLELRH 400 T + EE+ L AI C +C RPK +V K HL C TC ++ L+ R+ Sbjct: 419 TQDKEESVESSLP-----LNAIEPCVICQGRPKNGCIVHGKTGHLMACFTCAKK-LKKRN 472 Query: 399 RKCPGCGTP 373 + CP C P Sbjct: 473 KPCPVCRQP 481
>TRIM6_HUMAN (Q9C030) Tripartite motif protein 6 (RING finger protein 89)| Length = 488 Score = 32.7 bits (73), Expect = 1.1 Identities = 17/62 (27%), Positives = 26/62 (41%), Gaps = 6/62 (9%) Frame = -2 Query: 519 DCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRN------LELRHRKCPGCGTPFGQND 358 D + + C +C + E + C H FC CI N + R CP C T + + Sbjct: 8 DIREEVTCPICLELLTEPLSIDCGHSFCQACITPNGRESVIGQEGERSCPVCQTSYQPGN 67 Query: 357 VR 352 +R Sbjct: 68 LR 69
>RNF8_MOUSE (Q8VC56) Ubiquitin ligase protein RNF8 (EC 6.3.2.-) (RING finger| protein 8) (AIP37) (ActA-interacting protein 37) (LaXp180) Length = 488 Score = 32.7 bits (73), Expect = 1.1 Identities = 16/41 (39%), Positives = 22/41 (53%) Frame = -2 Query: 504 LKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 382 L+C +C + E V C H FCS CI ++ R +CP C Sbjct: 404 LQCIICSEYFIEAVTLNCAHSFCSFCINEWMK-RKVECPIC 443
>TRI10_MOUSE (Q9WUH5) Tripartite motif protein 10 (RING finger protein 9)| (Hematopoietic RING finger 1) Length = 489 Score = 32.7 bits (73), Expect = 1.1 Identities = 20/72 (27%), Positives = 27/72 (37%), Gaps = 6/72 (8%) Frame = -2 Query: 549 TIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLEL------RHRKCP 388 ++ L DE+ C +C +E V C H FC C+ R E+ CP Sbjct: 6 SVTSLADEVN-------CPICQGTLREPVTIDCGHNFCRGCLTRYCEIPGPESEESLSCP 58 Query: 387 GCGTPFGQNDVR 352 C PF R Sbjct: 59 LCKEPFRPGSFR 70
>ATL5L_ARATH (Q9FIR0) Putative RING-H2 finger protein ATL5L| Length = 289 Score = 32.7 bits (73), Expect = 1.1 Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 5/67 (7%) Frame = -2 Query: 528 EIKDCKAILKCGVCFDRPKEV-----VITKCFHLFCSTCIQRNLELRHRKCPGCGTPFGQ 364 ++++ K L+C +C +E ++T C+H+F CI + LE ++ CP C Sbjct: 104 DLREDKYGLECAICLLEFEEEHILLRLLTTCYHVFHQECIDQWLE-SNKTCPVCRRNLDP 162 Query: 363 NDVREVK 343 N +K Sbjct: 163 NAPENIK 169
>ATL4I_ARATH (O49691) Putative RING-H2 finger protein ATL4I| Length = 289 Score = 32.7 bits (73), Expect = 1.1 Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 4/53 (7%) Frame = -2 Query: 528 EIKDCKAILKCGVC---FDRPKEV-VITKCFHLFCSTCIQRNLELRHRKCPGC 382 ++++ K L+C +C FD + ++T C+H+F CI E HR CP C Sbjct: 100 DLREEKYGLECAICLLEFDGDHVLRLLTTCYHVFHQECIDLWFE-SHRTCPVC 151
>PCGF6_MOUSE (Q99NA9) Polycomb group RING finger protein 6 (RING finger protein| 134) (Mel18 and Bmi1-like RING finger) Length = 353 Score = 32.7 bits (73), Expect = 1.1 Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Frame = -2 Query: 567 SENEEATIQKLQDEIKDCKAILKCGVCFDRPKEVV-ITKCFHLFCSTCIQRNLELRHRKC 391 SE+EE + L + + C +C + IT+C H FC +CI R+ +R C Sbjct: 118 SEDEEERLINLVE----LTPYILCSICKGYLIDATTITECLHTFCKSCIVRHFYYSNR-C 172 Query: 390 PGC 382 P C Sbjct: 173 PKC 175
>PCGF2_HUMAN (P35227) Polycomb group RING finger protein 2 (DNA-binding protein| Mel-18) (RING finger protein 110) (Zinc finger protein 144) Length = 344 Score = 32.7 bits (73), Expect = 1.1 Identities = 14/27 (51%), Positives = 17/27 (62%) Frame = -2 Query: 462 ITKCFHLFCSTCIQRNLELRHRKCPGC 382 I +C H FC TCI R LE ++ CP C Sbjct: 31 IVECLHSFCKTCIVRYLE-TNKYCPMC 56
>TRAF7_HUMAN (Q6Q0C0) E3 ubiquitin protein ligase TRAF7 (EC 6.3.2.-) (TNF| receptor-associated factor 7) (Ring finger and WD repeat domain 1) (RING finger protein 119) Length = 670 Score = 32.7 bits (73), Expect = 1.1 Identities = 20/59 (33%), Positives = 25/59 (42%) Frame = -2 Query: 564 ENEEATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCP 388 E E + Q +K C C +C K+ VIT C H FC C L+ KCP Sbjct: 114 EEPEPLVFAEQPSVKLC-----CQLCCSVFKDPVITTCGHTFCRRC-----ALKSEKCP 162
>ICP0_HHV2H (P28284) Trans-acting transcriptional protein ICP0 (VMW118 protein)| Length = 825 Score = 32.3 bits (72), Expect = 1.4 Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 3/45 (6%) Frame = -2 Query: 498 CGVCFDR---PKEVVITKCFHLFCSTCIQRNLELRHRKCPGCGTP 373 C VC D P C H FC C++ + LR+ CP C TP Sbjct: 126 CAVCTDEIAPPLRCQSFPCLHPFCIPCMKTWIPLRN-TCPLCNTP 169
>TRI11_HUMAN (Q96F44) Tripartite motif protein 11 (EC 6.3.2.-) (RING finger| protein 92) (BIA1 protein) Length = 468 Score = 32.3 bits (72), Expect = 1.4 Identities = 12/27 (44%), Positives = 16/27 (59%) Frame = -2 Query: 498 CGVCFDRPKEVVITKCFHLFCSTCIQR 418 C +C D + V+T C H FC CI+R Sbjct: 16 CAICLDYFTDPVMTDCGHNFCRECIRR 42
>TRI50_PIG (Q865W2) Tripartite motif protein 50| Length = 486 Score = 32.3 bits (72), Expect = 1.4 Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 3/54 (5%) Frame = -2 Query: 534 QDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTC---IQRNLELRHRKCPGC 382 Q + + + L+C VC + KE ++ +C H +C C + R+L+ R CP C Sbjct: 4 QVSVPELEDRLQCPVCLEVFKEPLMLQCGHSYCKGCLLSLSRHLDSELR-CPVC 56
>TRI38_HUMAN (O00635) Tripartite motif protein 38 (RING finger protein 15) (Zinc| finger protein RoRet) Length = 465 Score = 32.3 bits (72), Expect = 1.4 Identities = 17/60 (28%), Positives = 22/60 (36%), Gaps = 8/60 (13%) Frame = -2 Query: 498 CGVCFDRPKEVVITKCFHLFCSTCI--------QRNLELRHRKCPGCGTPFGQNDVREVK 343 C +C V C H +C CI Q+ L CP C PF + +R K Sbjct: 16 CSICLSLMTNPVSINCGHSYCHLCITDFFKNPSQKQLRQETFCCPQCRAPFHMDSLRPNK 75
>PML_MOUSE (Q60953) Probable transcription factor PML| Length = 808 Score = 32.3 bits (72), Expect = 1.4 Identities = 22/70 (31%), Positives = 31/70 (44%) Frame = -2 Query: 567 SENEEATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCP 388 SE+ E + + I++ L+C C + K + C H CS C LE +CP Sbjct: 8 SEDYEHSQSPAEQAIQEEFQFLRCPSCQAQAKCPKLLPCLHTLCSGC----LEAPGLQCP 63 Query: 387 GCGTPFGQND 358 C P GQ D Sbjct: 64 ICKAP-GQAD 72
>MDM2_HORSE (P56951) Ubiquitin-protein ligase E3 Mdm2 (EC 6.3.2.-) (p53-binding| protein Mdm2) (Double minute 2 protein) (Edm2) Length = 491 Score = 32.3 bits (72), Expect = 1.4 Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 3/49 (6%) Frame = -2 Query: 510 AILKCGVCFDRPKE--VVITKCFHLF-CSTCIQRNLELRHRKCPGCGTP 373 AI C +C RPK +V K HL C TC ++ L+ R++ CP C P Sbjct: 434 AIEPCVICQGRPKNGCIVHGKTGHLMACFTCAKK-LKKRNKPCPVCRQP 481
>MDM2_FELCA (Q7YRZ8) Ubiquitin-protein ligase E3 Mdm2 (EC 6.3.2.-) (p53-binding| protein Mdm2) (Double minute 2 protein) Length = 491 Score = 32.3 bits (72), Expect = 1.4 Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 3/49 (6%) Frame = -2 Query: 510 AILKCGVCFDRPKE--VVITKCFHLF-CSTCIQRNLELRHRKCPGCGTP 373 AI C +C RPK +V K HL C TC ++ L+ R++ CP C P Sbjct: 434 AIEPCVICQGRPKNGCIVHGKTGHLMACFTCAKK-LKKRNKPCPVCRQP 481
>TRAF3_MOUSE (Q60803) TNF receptor-associated factor 3 (CD40 receptor-associated| factor 1) (CRAF1) (TRAFAMN) Length = 567 Score = 32.3 bits (72), Expect = 1.4 Identities = 18/59 (30%), Positives = 30/59 (50%) Frame = -2 Query: 558 EEATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 382 +E ++ ++D+ K C+ KC + PK+ T+C H FC +C+ L KC C Sbjct: 39 KEKFVKTVEDKYK-CE---KCRLVLCNPKQ---TECGHRFCESCMAALLSSSSPKCTAC 90
>RNF39_MACMU (Q5TM52) RING finger protein 39| Length = 420 Score = 32.3 bits (72), Expect = 1.4 Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 8/57 (14%) Frame = -2 Query: 498 CGVCFDRPKEVVITKCFHLFCSTCIQR--------NLELRHRKCPGCGTPFGQNDVR 352 CG F+ P V+ C H FC C+ R + E CP CG P + +R Sbjct: 91 CGGSFEDP---VLLACEHSFCRACLARRWGTPPATDTEASPTACPCCGLPCPRRSLR 144
>MDM2_CANFA (P56950) Ubiquitin-protein ligase E3 Mdm2 (EC 6.3.2.-) (p53-binding| protein Mdm2) (Double minute 2 protein) (Cdm2) Length = 487 Score = 32.3 bits (72), Expect = 1.4 Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 3/49 (6%) Frame = -2 Query: 510 AILKCGVCFDRPKE--VVITKCFHLF-CSTCIQRNLELRHRKCPGCGTP 373 AI C +C RPK +V K HL C TC ++ L+ R++ CP C P Sbjct: 430 AIEPCVICQGRPKNGCIVHGKTGHLMACFTCAKK-LKKRNKPCPVCRQP 477
>ZN183_BOVIN (Q67ER4) Zinc finger protein 183| Length = 343 Score = 32.0 bits (71), Expect = 1.8 Identities = 18/61 (29%), Positives = 28/61 (45%) Frame = -2 Query: 564 ENEEATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPG 385 E+E + ++EI KC +C + V+TKC H FC +C ++ R P Sbjct: 245 EDENYEVGSDEEEIP-----FKCFICRQTFQNPVVTKCRHYFCESCALQHF----RTTPR 295 Query: 384 C 382 C Sbjct: 296 C 296
>MAT1_MARGL (P51950) CDK-activating kinase assembly factor MAT1 (RING finger| protein MAT1) (Menage a trois) (CDK7/cyclin H assembly factor) Length = 324 Score = 32.0 bits (71), Expect = 1.8 Identities = 11/40 (27%), Positives = 18/40 (45%) Frame = -2 Query: 471 EVVITKCFHLFCSTCIQRNLELRHRKCPGCGTPFGQNDVR 352 ++++ C H C C++ CP C TP +N R Sbjct: 21 KLLVNVCGHTLCENCVEILFVRGSGSCPSCNTPLRRNQFR 60
>IAP2_NPVAC (P41454) Probable apoptosis inhibitor 2 (IAP-2)| Length = 249 Score = 32.0 bits (71), Expect = 1.8 Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 1/31 (3%) Frame = -2 Query: 507 ILKCGVCFDRPKEVVITKCFHL-FCSTCIQR 418 + +C VCFDR K V C HL C+ C +R Sbjct: 199 VSECKVCFDREKSVCFMPCRHLAVCTECSRR 229
>BARD1_MOUSE (O70445) BRCA1-associated RING domain protein 1 (BARD-1)| Length = 765 Score = 32.0 bits (71), Expect = 1.8 Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 1/46 (2%) Frame = -2 Query: 507 ILKCGVCFDRPKE-VVITKCFHLFCSTCIQRNLELRHRKCPGCGTP 373 +L+C C + KE V + C H+FCS CI + CP C TP Sbjct: 41 LLRCSRCANILKEPVCLGGCEHIFCSGCIS---DCVGSGCPVCYTP 83
>NF7B_XENLA (Q92021) Nuclear factor 7, brain (xNF7) (xNF7-B)| Length = 609 Score = 32.0 bits (71), Expect = 1.8 Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%) Frame = -2 Query: 504 LKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHR-KCPGC 382 L C +C + K+ V+ C H FC +CI + E + CP C Sbjct: 143 LTCPLCVELFKDPVMVACGHNFCRSCIDKAWEGQSSFACPEC 184
>NEURL_MOUSE (Q923S6) Neuralized-like protein 1 (m-neuralized 1) (m-neu1)| Length = 574 Score = 32.0 bits (71), Expect = 1.8 Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 1/44 (2%) Frame = -2 Query: 501 KCGVCFDRPKEVVITKCFHL-FCSTCIQRNLELRHRKCPGCGTP 373 +C +C++ + VI C H+ C +C R + H CP C P Sbjct: 520 ECTICYEHAVDTVIYTCGHMCLCYSCGLRLKKALHACCPICRRP 563
>RNF39_PANTR (Q7YR31) RING finger protein 39 (Protein HZFw)| Length = 420 Score = 32.0 bits (71), Expect = 1.8 Identities = 18/57 (31%), Positives = 23/57 (40%), Gaps = 8/57 (14%) Frame = -2 Query: 498 CGVCFDRPKEVVITKCFHLFCSTCIQR--------NLELRHRKCPGCGTPFGQNDVR 352 CG F+ P V+ C H FC C+ R E CP CG P + +R Sbjct: 91 CGGSFEDP---VLLACEHSFCRACLARRWGTPPATGTEASPTACPCCGLPCPRRSLR 144
>RNF39_HUMAN (Q9H2S5) RING finger protein 39 (Protein HZFw)| Length = 420 Score = 32.0 bits (71), Expect = 1.8 Identities = 18/57 (31%), Positives = 23/57 (40%), Gaps = 8/57 (14%) Frame = -2 Query: 498 CGVCFDRPKEVVITKCFHLFCSTCIQR--------NLELRHRKCPGCGTPFGQNDVR 352 CG F+ P V+ C H FC C+ R E CP CG P + +R Sbjct: 91 CGGSFEDP---VLLACEHSFCRACLARRWGTPPATGTEASPTACPCCGLPCPRRSLR 144
>BIRC2_MOUSE (Q62210) Baculoviral IAP repeat-containing protein 2 (Inhibitor of| apoptosis protein 2) (MIAP2) (MIAP-2) Length = 612 Score = 32.0 bits (71), Expect = 1.8 Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 1/60 (1%) Frame = -2 Query: 558 EEATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHL-FCSTCIQRNLELRHRKCPGC 382 E+ + L+++++ + C VC DR +V C HL C C RKCP C Sbjct: 545 EDVSGLSLEEQLRRLQEERTCKVCMDREVSIVFIPCGHLVVCQECAP-----SLRKCPIC 599
>TRAF4_HUMAN (Q9BUZ4) TNF receptor-associated factor 4 (Cysteine-rich domain| associated with RING and Traf domains protein 1) (Malignant 62) (RING finger protein 83) Length = 470 Score = 32.0 bits (71), Expect = 1.8 Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 1/43 (2%) Frame = -2 Query: 513 KAILKCGVCFDRPKEVV-ITKCFHLFCSTCIQRNLELRHRKCP 388 K L C +C +E V ++ C H FC TC+Q L KCP Sbjct: 13 KRRLLCPLCGKPMREPVQVSTCGHRFCDTCLQEFLSEGVFKCP 55
>TRAF3_HUMAN (Q13114) TNF receptor-associated factor 3 (CD40 receptor-associated| factor 1) (CRAF1) (CD40-binding protein) (CD40BP) (LMP1-associated protein) (LAP1) (CAP-1) Length = 568 Score = 32.0 bits (71), Expect = 1.8 Identities = 18/59 (30%), Positives = 30/59 (50%) Frame = -2 Query: 558 EEATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 382 +E ++ ++D+ K C+ KC + PK+ T+C H FC +C+ L KC C Sbjct: 40 KEKFVKTVEDKYK-CE---KCHLVLCSPKQ---TECGHRFCESCMAALLSSSSPKCTAC 91
>RAG1_BRARE (O13033) V(D)J recombination-activating protein 1 (RAG-1)| Length = 1057 Score = 32.0 bits (71), Expect = 1.8 Identities = 15/39 (38%), Positives = 17/39 (43%) Frame = -2 Query: 498 CGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 382 C VC + V + C HLFC CI R CP C Sbjct: 296 CQVCDHLLSDPVQSPCRHLFCRLCIIRYTHALGPNCPTC 334
>BARD1_HUMAN (Q99728) BRCA1-associated RING domain protein 1 (BARD-1)| Length = 777 Score = 32.0 bits (71), Expect = 1.8 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 1/53 (1%) Frame = -2 Query: 507 ILKCGVCFDRPKE-VVITKCFHLFCSTCIQRNLELRHRKCPGCGTPFGQNDVR 352 +L+C C + +E V + C H+FCS C+ + CP C TP D++ Sbjct: 47 LLRCSRCTNILREPVCLGGCEHIFCSNCVS---DCIGTGCPVCYTPAWIQDLK 96
>R113A_HUMAN (O15541) RING finger protein 113A (Zinc finger protein 183)| Length = 343 Score = 31.6 bits (70), Expect = 2.4 Identities = 14/40 (35%), Positives = 20/40 (50%) Frame = -2 Query: 501 KCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 382 KC +C + V+TKC H FC +C ++ R P C Sbjct: 261 KCFICRQSFQNPVVTKCRHYFCESCALQHF----RTTPRC 296
>MAT1_MOUSE (P51949) CDK-activating kinase assembly factor MAT1 (RING finger| protein MAT1) (Menage a trois) (CDK7/cyclin H assembly factor) (p36) (p35) Length = 309 Score = 31.6 bits (70), Expect = 2.4 Identities = 11/40 (27%), Positives = 20/40 (50%) Frame = -2 Query: 471 EVVITKCFHLFCSTCIQRNLELRHRKCPGCGTPFGQNDVR 352 ++++ C H C +C+ CP CGTP +++ R Sbjct: 20 KLMVNVCGHTLCESCVDLLFVRGAGNCPECGTPLRKSNFR 59
>MAT1_HUMAN (P51948) CDK-activating kinase assembly factor MAT1 (RING finger| protein MAT1) (Menage a trois) (CDK7/cyclin H assembly factor) (p36) (p35) (Cyclin G1-interacting protein) (RING finger protein 66) Length = 309 Score = 31.6 bits (70), Expect = 2.4 Identities = 11/40 (27%), Positives = 20/40 (50%) Frame = -2 Query: 471 EVVITKCFHLFCSTCIQRNLELRHRKCPGCGTPFGQNDVR 352 ++++ C H C +C+ CP CGTP +++ R Sbjct: 20 KLMVNVCGHTLCESCVDLLFVRGAGNCPECGTPLRKSNFR 59
>RKHD1_HUMAN (Q86XN8) RING finger and KH domain-containing protein 1| Length = 485 Score = 31.6 bits (70), Expect = 2.4 Identities = 16/47 (34%), Positives = 20/47 (42%), Gaps = 1/47 (2%) Frame = -2 Query: 501 KCGVCFDRPKEVVITKCFH-LFCSTCIQRNLELRHRKCPGCGTPFGQ 364 +C VC + + C H LFC C R +CP C TP Q Sbjct: 433 ECVVCAEGEVMAALVPCGHNLFCMDCAVRICGKSEPECPACRTPATQ 479
>NEUL1_HUMAN (O76050) Neuralized-like protein 1 (h-neuralized 1) (h-neu) (RING| finger protein 67) Length = 574 Score = 31.6 bits (70), Expect = 2.4 Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 1/44 (2%) Frame = -2 Query: 501 KCGVCFDRPKEVVITKCFHL-FCSTCIQRNLELRHRKCPGCGTP 373 +C +C++ + VI C H+ C C R + H CP C P Sbjct: 520 ECTICYEHAVDTVIYTCGHMCLCYACGLRLKKALHACCPICRRP 563
>ICP0_EHV1V (P84445) Trans-acting transcriptional protein ICP0 (Infected cell| protein 0) Length = 532 Score = 31.6 bits (70), Expect = 2.4 Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 1/44 (2%) Frame = -2 Query: 501 KCGVCFDRPKEVVIT-KCFHLFCSTCIQRNLELRHRKCPGCGTP 373 +C +C + P + C H FC CI R + ++ CP C P Sbjct: 7 RCPICLEDPSNYSMALPCLHAFCYVCITRWIR-QNPTCPLCKVP 49
>ICP0_EHV1B (P28990) Trans-acting transcriptional protein ICP0| Length = 532 Score = 31.6 bits (70), Expect = 2.4 Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 1/44 (2%) Frame = -2 Query: 501 KCGVCFDRPKEVVIT-KCFHLFCSTCIQRNLELRHRKCPGCGTP 373 +C +C + P + C H FC CI R + ++ CP C P Sbjct: 7 RCPICLEDPSNYSMALPCLHAFCYVCITRWIR-QNPTCPLCKVP 49
>BIRC3_MOUSE (O08863) Baculoviral IAP repeat-containing protein 3 (Inhibitor of| apoptosis protein 1) (MIAP1) (MIAP-1) Length = 600 Score = 31.6 bits (70), Expect = 2.4 Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 1/59 (1%) Frame = -2 Query: 555 EATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHL-FCSTCIQRNLELRHRKCPGC 382 E ++KLQ+E C VC DR +V C HL C C RKCP C Sbjct: 541 EEQLRKLQEE-------RMCKVCMDREVSIVFIPCGHLVVCKDCAP-----SLRKCPIC 587
>BCS1_XENLA (Q7ZTL7) Mitochondrial chaperone BCS1 (BCS1-like protein)| Length = 419 Score = 31.6 bits (70), Expect = 2.4 Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 1/62 (1%) Frame = +2 Query: 278 WCCPRVPNTTRSSKPASLGLQIFTSRTSFCPKGVPQPG-HFRWRSSRFLWIQVEQNRWKH 454 W NT S S LQ + R S VP PG HF W S+ WI++E+NR K Sbjct: 66 WISHYAKNTQHLSVETSY-LQHESGRISTKFDFVPSPGNHFIWYRSK--WIRIERNREKQ 122 Query: 455 LV 460 ++ Sbjct: 123 MI 124
>TRI50_MOUSE (Q810I2) Tripartite motif protein 50| Length = 483 Score = 31.6 bits (70), Expect = 2.4 Identities = 13/42 (30%), Positives = 24/42 (57%) Frame = -2 Query: 549 TIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTCI 424 T+ +LQD+ L+C +C + KE ++ +C H +C C+ Sbjct: 6 TVPELQDQ-------LQCPICLEVFKEPLMLQCGHSYCKDCL 40
>ICP0_PRVIF (P29129) Trans-acting transcriptional protein ICP0 (Early protein| 0) (EP0) Length = 410 Score = 31.6 bits (70), Expect = 2.4 Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 1/43 (2%) Frame = -2 Query: 507 ILKCGVCFD-RPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 382 ++ C +C D E C H FC CIQR L CP C Sbjct: 43 VMDCPICLDVAATEAQTLPCMHKFCLDCIQR-WTLTSTACPLC 84
>CWC24_DEBHA (Q6BYU0) Pre-mRNA-splicing factor CWC24| Length = 232 Score = 31.6 bits (70), Expect = 2.4 Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Frame = -2 Query: 564 ENEEATIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCSTC-IQRNLELRHRKCP 388 E E T Q+ D+ K+ + +C +C V T+C HLFC C + R L+ C Sbjct: 151 EWETVTEQQKPDKSKE-QVPYRCVLCSKDYTLPVKTECNHLFCQKCFMNRYRNLKKPNCF 209 Query: 387 GCGTPFG 367 CG G Sbjct: 210 ICGKDTG 216
>IAP1_NPVOP (O10296) Apoptosis inhibitor 1 (IAP-1)| Length = 275 Score = 31.6 bits (70), Expect = 2.4 Identities = 17/41 (41%), Positives = 23/41 (56%) Frame = -2 Query: 504 LKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGC 382 L+C VC +R ++ V+ C H FC C+Q L KCP C Sbjct: 225 LECKVCLERQRDAVLLPCRH-FC-VCMQCYFAL-DGKCPTC 262
>ZN179_RAT (O70418) Zinc finger protein 179 (Brain finger protein)| Length = 631 Score = 31.6 bits (70), Expect = 2.4 Identities = 13/42 (30%), Positives = 19/42 (45%) Frame = -2 Query: 498 CGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGCGTP 373 C +C +R +E + C H FC C + + PGC P Sbjct: 57 CSICLERLREPISLDCGHDFCIRCFSTH------RIPGCELP 92
>NF7O_XENLA (Q91431) Nuclear factor 7, ovary (xNF7-O)| Length = 610 Score = 31.6 bits (70), Expect = 2.4 Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%) Frame = -2 Query: 504 LKCGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHR-KCPGC 382 L C +C + K+ V+ C H FC +CI + E + CP C Sbjct: 144 LTCPLCVELFKDPVMVACGHNFCRSCIDKVWEGQSSFACPEC 185
>PCGF4_HUMAN (P35226) Polycomb group RING finger protein 4 (Polycomb complex| protein BMI-1) (RING finger protein 51) Length = 326 Score = 31.2 bits (69), Expect = 3.1 Identities = 14/27 (51%), Positives = 16/27 (59%) Frame = -2 Query: 462 ITKCFHLFCSTCIQRNLELRHRKCPGC 382 I +C H FC TCI R LE + CP C Sbjct: 31 IIECLHSFCKTCIVRYLE-TSKYCPIC 56
>PCGF4_FELCA (Q9TST0) Polycomb group RING finger protein 4 (Polycomb complex| protein BMI-1) Length = 326 Score = 31.2 bits (69), Expect = 3.1 Identities = 14/27 (51%), Positives = 16/27 (59%) Frame = -2 Query: 462 ITKCFHLFCSTCIQRNLELRHRKCPGC 382 I +C H FC TCI R LE + CP C Sbjct: 31 IIECLHSFCKTCIVRYLE-TSKYCPIC 56
>CHFR_MOUSE (Q810L3) Ubiquitin-protein ligase CHFR (EC 6.3.2.-) (Checkpoint| with forkhead and RING finger domains protein) Length = 664 Score = 31.2 bits (69), Expect = 3.1 Identities = 19/70 (27%), Positives = 28/70 (40%), Gaps = 8/70 (11%) Frame = -2 Query: 558 EEATIQKLQDEIKDCKA-------ILKCGVCFDRPKEVV-ITKCFHLFCSTCIQRNLELR 403 + Q +++KD L C +C D + V + C H FC+ C +E R Sbjct: 276 QRGNAQTSSEDVKDASVKPDKMEETLTCIICQDLLHDCVSLQPCMHTFCAACYSGWME-R 334 Query: 402 HRKCPGCGTP 373 CP C P Sbjct: 335 SSLCPTCRCP 344
>UB7I3_RAT (Q62921) Ubiquitin-conjugating enzyme 7-interacting protein 3 (RBCC| protein interacting with PKC) (Protein kinase C-binding protein beta-15) Length = 498 Score = 31.2 bits (69), Expect = 3.1 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 6/44 (13%) Frame = -2 Query: 501 KCGVCFD--RPKE-VVITKCFHLFCSTCIQ---RNLELRHRKCP 388 +C VC+ P E VV+ +C H FC C+Q RN + CP Sbjct: 269 ECPVCYSVLAPGEAVVLRECLHTFCRECLQGTIRNSQEAEVSCP 312
>TRI22_HUMAN (Q8IYM9) Tripartite motif protein 22 (RING finger protein 94) (50| kDa-stimulated trans-acting factor) (Staf-50) Length = 498 Score = 31.2 bits (69), Expect = 3.1 Identities = 16/62 (25%), Positives = 25/62 (40%), Gaps = 6/62 (9%) Frame = -2 Query: 519 DCKAILKCGVCFDRPKEVVITKCFHLFCSTCIQRNLE------LRHRKCPGCGTPFGQND 358 D + + C +C + E + C H FC CI ++ CP C T F + Sbjct: 8 DIEKEVTCPICLELLTEPLSLDCGHSFCQACITAKIKESVIISRGESSCPVCQTRFQPGN 67 Query: 357 VR 352 +R Sbjct: 68 LR 69
>CWC24_CANAL (Q5ACW2) Pre-mRNA-splicing factor CWC24| Length = 216 Score = 31.2 bits (69), Expect = 3.1 Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%) Frame = -2 Query: 534 QDEIKDCKAI-LKCGVCFDRPKEVVITKCFHLFCSTC 427 Q E+K+ + I KC +C K + T+C H+FC C Sbjct: 143 QKEVKEKEDIPFKCVLCKSDYKSPIKTECGHIFCKAC 179
>TRIM7_HUMAN (Q9C029) Tripartite motif protein 7 (Glycogenin-interacting| protein) (RING finger protein 90) Length = 511 Score = 31.2 bits (69), Expect = 3.1 Identities = 15/41 (36%), Positives = 20/41 (48%) Frame = -2 Query: 498 CGVCFDRPKEVVITKCFHLFCSTCIQRNLELRHRKCPGCGT 376 C +C + +E V +C H FC CI R E PG G+ Sbjct: 29 CSICLELFREPVSVECGHSFCRACIGRCWER-----PGAGS 64
>PCGF4_MOUSE (P25916) Polycomb group RING finger protein 4 (Polycomb complex| protein BMI-1) Length = 324 Score = 31.2 bits (69), Expect = 3.1 Identities = 14/27 (51%), Positives = 16/27 (59%) Frame = -2 Query: 462 ITKCFHLFCSTCIQRNLELRHRKCPGC 382 I +C H FC TCI R LE + CP C Sbjct: 31 IIECLHSFCKTCIVRYLE-TSKYCPIC 56
>UB7I3_HUMAN (Q9BYM8) Ubiquitin-conjugating enzyme 7-interacting protein 3| (Hepatitis B virus X-associated protein 4) (HBV-associated factor 4) (RING finger protein 54) Length = 500 Score = 31.2 bits (69), Expect = 3.1 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 6/44 (13%) Frame = -2 Query: 501 KCGVCFD--RPKE-VVITKCFHLFCSTCIQ---RNLELRHRKCP 388 +C VC+ P E VV+ +C H FC C+Q RN + CP Sbjct: 271 ECPVCYSVLAPGEAVVLRECLHTFCRECLQGTIRNSQEAEVSCP 314
>SIA7A_HUMAN (Q9NSC7) Alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase| 1 (EC 2.4.99.3) (GalNAc alpha-2,6-sialyltransferase I) (ST6GalNAc I) (Sialyltransferase 7A) Length = 600 Score = 31.2 bits (69), Expect = 3.1 Identities = 15/52 (28%), Positives = 27/52 (51%) Frame = -1 Query: 475 ERGCDHQMLPPVLLNLYPEEPRATPPEVPGLRHTFRAKRRARGEDLKSQRRW 320 ++G ++PP ++P+ATPP P T + +R + + KS+ RW Sbjct: 216 QKGVTTAVIPPK-----EKKPQATPPPAPFQSPTTQRNQRLKAANFKSEPRW 262
>BARD1_RAT (Q9QZH2) BRCA1-associated RING domain protein 1 (BARD-1)| Length = 768 Score = 31.2 bits (69), Expect = 3.1 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 1/46 (2%) Frame = -2 Query: 507 ILKCGVCFDRPKE-VVITKCFHLFCSTCIQRNLELRHRKCPGCGTP 373 +L+C C + +E V + C H+FCS CI + CP C TP Sbjct: 41 LLRCSRCANILREPVCLGGCEHIFCSGCIS---DCVGSGCPVCHTP 83 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 91,340,577 Number of Sequences: 219361 Number of extensions: 1987405 Number of successful extensions: 6285 Number of sequences better than 10.0: 314 Number of HSP's better than 10.0 without gapping: 6005 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6270 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6769072002 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
