>NU4M_APILI (P34853) NADH-ubiquinone oxidoreductase chain 4 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 4)
          Length = 447

 Score = 27.3 bits (59), Expect = 10.0
 Identities = 21/84 (25%), Positives = 46/84 (54%), Gaps = 11/84 (13%)
 Frame = -3

Query: 261 NRMKTNAL----NVSISYLRIQMF------WLMLQL-VVLSMYSRNIVLLTTWV*ESLME 115
           N+MK N      N+ I  L + +F      W+ +   +  +MYS  +++LT W+   L+ 
Sbjct: 26  NKMKNNLNLIIGNLIIINLLLNLFNLNWIDWIYIFCNLSFNMYSYGLIMLTLWI-FGLIF 84

Query: 114 MAMNVNNVKVLSI*IMNVCSVILL 43
           +++N N++  L + ++ + S++L+
Sbjct: 85  ISLNNNSLNCLFMNLLLMISLLLV 108


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,757,022
Number of Sequences: 219361
Number of extensions: 731179
Number of successful extensions: 1528
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1509
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1528
length of database: 80,573,946
effective HSP length: 79
effective length of database: 63,244,427
effective search space used: 1517866248
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)