ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd22e23 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_506943.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1008_D06.19 mRNA Length = 1716 Score = 278 bits (140), Expect = 2e-71 Identities = 311/368 (84%) Strand = Plus / Plus Query: 158 acgtcgtagagcacctcaagggtcctctgctgcacgttgccgatgatgccggtgcttccg 217 |||||||| || ||||| | |||| |||||||||||| ||||||||||||||| | ||| Sbjct: 325 acgtcgtacaggacctcgaacgtccgctgctgcacgttcccgatgatgccggtggtcccg 384 Query: 218 tcgtcgccggtgtccgtgaacgcgaggcagctgccgaatatgatcccgttggcgtcgagg 277 |||||||||||| | | ||||||||||||| ||||| | ||||||||||| | ||||||| Sbjct: 385 tcgtcgccggtggcggcgaacgcgaggcagttgccgtacatgatcccgttcgggtcgagg 444 Query: 278 tcgacgaccttgccgccgtcgaacaccaaagcgacggtgggtatggtgacgttgtcctgg 337 |||| | | ||||||| |||||||| |||||||| ||||||| || | | |||| Sbjct: 445 tcgatggcggcgccgccggagaacaccagcgcgacggtcggtatggagatctgggtctgg 504 Query: 338 ccgctgaagtcgaagcacgtgtccaggatgctcctggccggcgccgtcgggtactgcttc 397 ||| |||||||||||||||||| |||||||||||||||||||||| | ||||||||||| Sbjct: 505 ccggcgaagtcgaagcacgtgtcgaggatgctcctggccggcgccgaccggtactgcttc 564 Query: 398 atgccgtccttgaacgccgtcttgagcgccgtgtacgccgtgggcggcagccgcgtgatg 457 |||||| |||||||||||| | ||||||| ||||||||| |||||||||||||||||| Sbjct: 565 atgccggccttgaacgccgacgacagcgccgagtacgccgtcggcggcagccgcgtgatg 624 Query: 458 atggtcccggagtccatcacggacccggcggagaagacggagggcgccacgctgagctgc 517 || || |||||||||| |||||||||||||| ||| || || |||| || | ||||||| Sbjct: 625 atcgtgccggagtccaccacggacccggcggcgaacaccgacggcgacagcccgagctgc 684 Query: 518 tccccgcc 525 | |||||| Sbjct: 685 ttcccgcc 692 Score = 40.1 bits (20), Expect = 7.6 Identities = 42/48 (87%), Gaps = 1/48 (2%) Strand = Plus / Plus Query: 9 cttacctcgcaactagaaa-aagaagacaaccacatgagagcagccta 55 ||||||||||||| | ||| ||| |||| |||||||||||||| |||| Sbjct: 162 cttacctcgcaaccacaaacaagtagacgaccacatgagagcaaccta 209
>ref|XM_467513.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1716 Score = 278 bits (140), Expect = 2e-71 Identities = 311/368 (84%) Strand = Plus / Minus Query: 158 acgtcgtagagcacctcaagggtcctctgctgcacgttgccgatgatgccggtgcttccg 217 |||||||| || ||||| | |||| |||||||||||| ||||||||||||||| | ||| Sbjct: 1392 acgtcgtacaggacctcgaacgtccgctgctgcacgttcccgatgatgccggtggtcccg 1333 Query: 218 tcgtcgccggtgtccgtgaacgcgaggcagctgccgaatatgatcccgttggcgtcgagg 277 |||||||||||| | | ||||||||||||| ||||| | ||||||||||| | ||||||| Sbjct: 1332 tcgtcgccggtggcggcgaacgcgaggcagttgccgtacatgatcccgttcgggtcgagg 1273 Query: 278 tcgacgaccttgccgccgtcgaacaccaaagcgacggtgggtatggtgacgttgtcctgg 337 |||| | | ||||||| |||||||| |||||||| ||||||| || | | |||| Sbjct: 1272 tcgatggcggcgccgccggagaacaccagcgcgacggtcggtatggagatctgggtctgg 1213 Query: 338 ccgctgaagtcgaagcacgtgtccaggatgctcctggccggcgccgtcgggtactgcttc 397 ||| |||||||||||||||||| |||||||||||||||||||||| | ||||||||||| Sbjct: 1212 ccggcgaagtcgaagcacgtgtcgaggatgctcctggccggcgccgaccggtactgcttc 1153 Query: 398 atgccgtccttgaacgccgtcttgagcgccgtgtacgccgtgggcggcagccgcgtgatg 457 |||||| |||||||||||| | ||||||| ||||||||| |||||||||||||||||| Sbjct: 1152 atgccggccttgaacgccgacgacagcgccgagtacgccgtcggcggcagccgcgtgatg 1093 Query: 458 atggtcccggagtccatcacggacccggcggagaagacggagggcgccacgctgagctgc 517 || || |||||||||| |||||||||||||| ||| || || |||| || | ||||||| Sbjct: 1092 atcgtgccggagtccaccacggacccggcggcgaacaccgacggcgacagcccgagctgc 1033 Query: 518 tccccgcc 525 | |||||| Sbjct: 1032 ttcccgcc 1025 Score = 40.1 bits (20), Expect = 7.6 Identities = 42/48 (87%), Gaps = 1/48 (2%) Strand = Plus / Minus Query: 9 cttacctcgcaactagaaa-aagaagacaaccacatgagagcagccta 55 ||||||||||||| | ||| ||| |||| |||||||||||||| |||| Sbjct: 1555 cttacctcgcaaccacaaacaagtagacgaccacatgagagcaaccta 1508
>ref|XM_506944.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1008_D06.19 mRNA Length = 1737 Score = 278 bits (140), Expect = 2e-71 Identities = 311/368 (84%) Strand = Plus / Minus Query: 158 acgtcgtagagcacctcaagggtcctctgctgcacgttgccgatgatgccggtgcttccg 217 |||||||| || ||||| | |||| |||||||||||| ||||||||||||||| | ||| Sbjct: 1398 acgtcgtacaggacctcgaacgtccgctgctgcacgttcccgatgatgccggtggtcccg 1339 Query: 218 tcgtcgccggtgtccgtgaacgcgaggcagctgccgaatatgatcccgttggcgtcgagg 277 |||||||||||| | | ||||||||||||| ||||| | ||||||||||| | ||||||| Sbjct: 1338 tcgtcgccggtggcggcgaacgcgaggcagttgccgtacatgatcccgttcgggtcgagg 1279 Query: 278 tcgacgaccttgccgccgtcgaacaccaaagcgacggtgggtatggtgacgttgtcctgg 337 |||| | | ||||||| |||||||| |||||||| ||||||| || | | |||| Sbjct: 1278 tcgatggcggcgccgccggagaacaccagcgcgacggtcggtatggagatctgggtctgg 1219 Query: 338 ccgctgaagtcgaagcacgtgtccaggatgctcctggccggcgccgtcgggtactgcttc 397 ||| |||||||||||||||||| |||||||||||||||||||||| | ||||||||||| Sbjct: 1218 ccggcgaagtcgaagcacgtgtcgaggatgctcctggccggcgccgaccggtactgcttc 1159 Query: 398 atgccgtccttgaacgccgtcttgagcgccgtgtacgccgtgggcggcagccgcgtgatg 457 |||||| |||||||||||| | ||||||| ||||||||| |||||||||||||||||| Sbjct: 1158 atgccggccttgaacgccgacgacagcgccgagtacgccgtcggcggcagccgcgtgatg 1099 Query: 458 atggtcccggagtccatcacggacccggcggagaagacggagggcgccacgctgagctgc 517 || || |||||||||| |||||||||||||| ||| || || |||| || | ||||||| Sbjct: 1098 atcgtgccggagtccaccacggacccggcggcgaacaccgacggcgacagcccgagctgc 1039 Query: 518 tccccgcc 525 | |||||| Sbjct: 1038 ttcccgcc 1031 Score = 40.1 bits (20), Expect = 7.6 Identities = 42/48 (87%), Gaps = 1/48 (2%) Strand = Plus / Minus Query: 9 cttacctcgcaactagaaa-aagaagacaaccacatgagagcagccta 55 ||||||||||||| | ||| ||| |||| |||||||||||||| |||| Sbjct: 1561 cttacctcgcaaccacaaacaagtagacgaccacatgagagcaaccta 1514
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 278 bits (140), Expect = 2e-71 Identities = 311/368 (84%) Strand = Plus / Plus Query: 158 acgtcgtagagcacctcaagggtcctctgctgcacgttgccgatgatgccggtgcttccg 217 |||||||| || ||||| | |||| |||||||||||| ||||||||||||||| | ||| Sbjct: 29911320 acgtcgtacaggacctcgaacgtccgctgctgcacgttcccgatgatgccggtggtcccg 29911379 Query: 218 tcgtcgccggtgtccgtgaacgcgaggcagctgccgaatatgatcccgttggcgtcgagg 277 |||||||||||| | | ||||||||||||| ||||| | ||||||||||| | ||||||| Sbjct: 29911380 tcgtcgccggtggcggcgaacgcgaggcagttgccgtacatgatcccgttcgggtcgagg 29911439 Query: 278 tcgacgaccttgccgccgtcgaacaccaaagcgacggtgggtatggtgacgttgtcctgg 337 |||| | | ||||||| |||||||| |||||||| ||||||| || | | |||| Sbjct: 29911440 tcgatggcggcgccgccggagaacaccagcgcgacggtcggtatggagatctgggtctgg 29911499 Query: 338 ccgctgaagtcgaagcacgtgtccaggatgctcctggccggcgccgtcgggtactgcttc 397 ||| |||||||||||||||||| |||||||||||||||||||||| | ||||||||||| Sbjct: 29911500 ccggcgaagtcgaagcacgtgtcgaggatgctcctggccggcgccgaccggtactgcttc 29911559 Query: 398 atgccgtccttgaacgccgtcttgagcgccgtgtacgccgtgggcggcagccgcgtgatg 457 |||||| |||||||||||| | ||||||| ||||||||| |||||||||||||||||| Sbjct: 29911560 atgccggccttgaacgccgacgacagcgccgagtacgccgtcggcggcagccgcgtgatg 29911619 Query: 458 atggtcccggagtccatcacggacccggcggagaagacggagggcgccacgctgagctgc 517 || || |||||||||| |||||||||||||| ||| || || |||| || | ||||||| Sbjct: 29911620 atcgtgccggagtccaccacggacccggcggcgaacaccgacggcgacagcccgagctgc 29911679 Query: 518 tccccgcc 525 | |||||| Sbjct: 29911680 ttcccgcc 29911687 Score = 60.0 bits (30), Expect = 8e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 422 agcgccgtgtacgccgtgggcggcagccgcgtga 455 ||||||| |||||||||||||||||||||||||| Sbjct: 29908976 agcgccgagtacgccgtgggcggcagccgcgtga 29908943 Score = 42.1 bits (21), Expect = 1.9 Identities = 42/49 (85%) Strand = Plus / Minus Query: 342 tgaagtcgaagcacgtgtccaggatgctcctggccggcgccgtcgggta 390 |||||||| |||| ||||||||||| | | | |||||||||| |||||| Sbjct: 29909062 tgaagtcgtagcaggtgtccaggatccccgtcgccggcgccgacgggta 29909014 Score = 40.1 bits (20), Expect = 7.6 Identities = 42/48 (87%), Gaps = 1/48 (2%) Strand = Plus / Plus Query: 9 cttacctcgcaactagaaa-aagaagacaaccacatgagagcagccta 55 ||||||||||||| | ||| ||| |||| |||||||||||||| |||| Sbjct: 29911157 cttacctcgcaaccacaaacaagtagacgaccacatgagagcaaccta 29911204
>dbj|AP005052.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0654B04 Length = 156907 Score = 278 bits (140), Expect = 2e-71 Identities = 311/368 (84%) Strand = Plus / Plus Query: 158 acgtcgtagagcacctcaagggtcctctgctgcacgttgccgatgatgccggtgcttccg 217 |||||||| || ||||| | |||| |||||||||||| ||||||||||||||| | ||| Sbjct: 11596 acgtcgtacaggacctcgaacgtccgctgctgcacgttcccgatgatgccggtggtcccg 11655 Query: 218 tcgtcgccggtgtccgtgaacgcgaggcagctgccgaatatgatcccgttggcgtcgagg 277 |||||||||||| | | ||||||||||||| ||||| | ||||||||||| | ||||||| Sbjct: 11656 tcgtcgccggtggcggcgaacgcgaggcagttgccgtacatgatcccgttcgggtcgagg 11715 Query: 278 tcgacgaccttgccgccgtcgaacaccaaagcgacggtgggtatggtgacgttgtcctgg 337 |||| | | ||||||| |||||||| |||||||| ||||||| || | | |||| Sbjct: 11716 tcgatggcggcgccgccggagaacaccagcgcgacggtcggtatggagatctgggtctgg 11775 Query: 338 ccgctgaagtcgaagcacgtgtccaggatgctcctggccggcgccgtcgggtactgcttc 397 ||| |||||||||||||||||| |||||||||||||||||||||| | ||||||||||| Sbjct: 11776 ccggcgaagtcgaagcacgtgtcgaggatgctcctggccggcgccgaccggtactgcttc 11835 Query: 398 atgccgtccttgaacgccgtcttgagcgccgtgtacgccgtgggcggcagccgcgtgatg 457 |||||| |||||||||||| | ||||||| ||||||||| |||||||||||||||||| Sbjct: 11836 atgccggccttgaacgccgacgacagcgccgagtacgccgtcggcggcagccgcgtgatg 11895 Query: 458 atggtcccggagtccatcacggacccggcggagaagacggagggcgccacgctgagctgc 517 || || |||||||||| |||||||||||||| ||| || || |||| || | ||||||| Sbjct: 11896 atcgtgccggagtccaccacggacccggcggcgaacaccgacggcgacagcccgagctgc 11955 Query: 518 tccccgcc 525 | |||||| Sbjct: 11956 ttcccgcc 11963 Score = 60.0 bits (30), Expect = 8e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 422 agcgccgtgtacgccgtgggcggcagccgcgtga 455 ||||||| |||||||||||||||||||||||||| Sbjct: 9252 agcgccgagtacgccgtgggcggcagccgcgtga 9219 Score = 42.1 bits (21), Expect = 1.9 Identities = 42/49 (85%) Strand = Plus / Minus Query: 342 tgaagtcgaagcacgtgtccaggatgctcctggccggcgccgtcgggta 390 |||||||| |||| ||||||||||| | | | |||||||||| |||||| Sbjct: 9338 tgaagtcgtagcaggtgtccaggatccccgtcgccggcgccgacgggta 9290 Score = 40.1 bits (20), Expect = 7.6 Identities = 42/48 (87%), Gaps = 1/48 (2%) Strand = Plus / Plus Query: 9 cttacctcgcaactagaaa-aagaagacaaccacatgagagcagccta 55 ||||||||||||| | ||| ||| |||| |||||||||||||| |||| Sbjct: 11433 cttacctcgcaaccacaaacaagtagacgaccacatgagagcaaccta 11480
>dbj|AP004040.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1008_D06 Length = 112768 Score = 278 bits (140), Expect = 2e-71 Identities = 311/368 (84%) Strand = Plus / Plus Query: 158 acgtcgtagagcacctcaagggtcctctgctgcacgttgccgatgatgccggtgcttccg 217 |||||||| || ||||| | |||| |||||||||||| ||||||||||||||| | ||| Sbjct: 68285 acgtcgtacaggacctcgaacgtccgctgctgcacgttcccgatgatgccggtggtcccg 68344 Query: 218 tcgtcgccggtgtccgtgaacgcgaggcagctgccgaatatgatcccgttggcgtcgagg 277 |||||||||||| | | ||||||||||||| ||||| | ||||||||||| | ||||||| Sbjct: 68345 tcgtcgccggtggcggcgaacgcgaggcagttgccgtacatgatcccgttcgggtcgagg 68404 Query: 278 tcgacgaccttgccgccgtcgaacaccaaagcgacggtgggtatggtgacgttgtcctgg 337 |||| | | ||||||| |||||||| |||||||| ||||||| || | | |||| Sbjct: 68405 tcgatggcggcgccgccggagaacaccagcgcgacggtcggtatggagatctgggtctgg 68464 Query: 338 ccgctgaagtcgaagcacgtgtccaggatgctcctggccggcgccgtcgggtactgcttc 397 ||| |||||||||||||||||| |||||||||||||||||||||| | ||||||||||| Sbjct: 68465 ccggcgaagtcgaagcacgtgtcgaggatgctcctggccggcgccgaccggtactgcttc 68524 Query: 398 atgccgtccttgaacgccgtcttgagcgccgtgtacgccgtgggcggcagccgcgtgatg 457 |||||| |||||||||||| | ||||||| ||||||||| |||||||||||||||||| Sbjct: 68525 atgccggccttgaacgccgacgacagcgccgagtacgccgtcggcggcagccgcgtgatg 68584 Query: 458 atggtcccggagtccatcacggacccggcggagaagacggagggcgccacgctgagctgc 517 || || |||||||||| |||||||||||||| ||| || || |||| || | ||||||| Sbjct: 68585 atcgtgccggagtccaccacggacccggcggcgaacaccgacggcgacagcccgagctgc 68644 Query: 518 tccccgcc 525 | |||||| Sbjct: 68645 ttcccgcc 68652 Score = 60.0 bits (30), Expect = 8e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 422 agcgccgtgtacgccgtgggcggcagccgcgtga 455 ||||||| |||||||||||||||||||||||||| Sbjct: 65941 agcgccgagtacgccgtgggcggcagccgcgtga 65908 Score = 42.1 bits (21), Expect = 1.9 Identities = 42/49 (85%) Strand = Plus / Minus Query: 342 tgaagtcgaagcacgtgtccaggatgctcctggccggcgccgtcgggta 390 |||||||| |||| ||||||||||| | | | |||||||||| |||||| Sbjct: 66027 tgaagtcgtagcaggtgtccaggatccccgtcgccggcgccgacgggta 65979 Score = 40.1 bits (20), Expect = 7.6 Identities = 42/48 (87%), Gaps = 1/48 (2%) Strand = Plus / Plus Query: 9 cttacctcgcaactagaaa-aagaagacaaccacatgagagcagccta 55 ||||||||||||| | ||| ||| |||| |||||||||||||| |||| Sbjct: 68122 cttacctcgcaaccacaaacaagtagacgaccacatgagagcaaccta 68169
>dbj|AK105989.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-G11, full insert sequence Length = 1716 Score = 278 bits (140), Expect = 2e-71 Identities = 311/368 (84%) Strand = Plus / Minus Query: 158 acgtcgtagagcacctcaagggtcctctgctgcacgttgccgatgatgccggtgcttccg 217 |||||||| || ||||| | |||| |||||||||||| ||||||||||||||| | ||| Sbjct: 1392 acgtcgtacaggacctcgaacgtccgctgctgcacgttcccgatgatgccggtggtcccg 1333 Query: 218 tcgtcgccggtgtccgtgaacgcgaggcagctgccgaatatgatcccgttggcgtcgagg 277 |||||||||||| | | ||||||||||||| ||||| | ||||||||||| | ||||||| Sbjct: 1332 tcgtcgccggtggcggcgaacgcgaggcagttgccgtacatgatcccgttcgggtcgagg 1273 Query: 278 tcgacgaccttgccgccgtcgaacaccaaagcgacggtgggtatggtgacgttgtcctgg 337 |||| | | ||||||| |||||||| |||||||| ||||||| || | | |||| Sbjct: 1272 tcgatggcggcgccgccggagaacaccagcgcgacggtcggtatggagatctgggtctgg 1213 Query: 338 ccgctgaagtcgaagcacgtgtccaggatgctcctggccggcgccgtcgggtactgcttc 397 ||| |||||||||||||||||| |||||||||||||||||||||| | ||||||||||| Sbjct: 1212 ccggcgaagtcgaagcacgtgtcgaggatgctcctggccggcgccgaccggtactgcttc 1153 Query: 398 atgccgtccttgaacgccgtcttgagcgccgtgtacgccgtgggcggcagccgcgtgatg 457 |||||| |||||||||||| | ||||||| ||||||||| |||||||||||||||||| Sbjct: 1152 atgccggccttgaacgccgacgacagcgccgagtacgccgtcggcggcagccgcgtgatg 1093 Query: 458 atggtcccggagtccatcacggacccggcggagaagacggagggcgccacgctgagctgc 517 || || |||||||||| |||||||||||||| ||| || || |||| || | ||||||| Sbjct: 1092 atcgtgccggagtccaccacggacccggcggcgaacaccgacggcgacagcccgagctgc 1033 Query: 518 tccccgcc 525 | |||||| Sbjct: 1032 ttcccgcc 1025 Score = 40.1 bits (20), Expect = 7.6 Identities = 42/48 (87%), Gaps = 1/48 (2%) Strand = Plus / Minus Query: 9 cttacctcgcaactagaaa-aagaagacaaccacatgagagcagccta 55 ||||||||||||| | ||| ||| |||| |||||||||||||| |||| Sbjct: 1555 cttacctcgcaaccacaaacaagtagacgaccacatgagagcaaccta 1508
>dbj|AK101967.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033076I21, full insert sequence Length = 1736 Score = 278 bits (140), Expect = 2e-71 Identities = 311/368 (84%) Strand = Plus / Minus Query: 158 acgtcgtagagcacctcaagggtcctctgctgcacgttgccgatgatgccggtgcttccg 217 |||||||| || ||||| | |||| |||||||||||| ||||||||||||||| | ||| Sbjct: 1397 acgtcgtacaggacctcgaacgtccgctgctgcacgttcccgatgatgccggtggtcccg 1338 Query: 218 tcgtcgccggtgtccgtgaacgcgaggcagctgccgaatatgatcccgttggcgtcgagg 277 |||||||||||| | | ||||||||||||| ||||| | ||||||||||| | ||||||| Sbjct: 1337 tcgtcgccggtggcggcgaacgcgaggcagttgccgtacatgatcccgttcgggtcgagg 1278 Query: 278 tcgacgaccttgccgccgtcgaacaccaaagcgacggtgggtatggtgacgttgtcctgg 337 |||| | | ||||||| |||||||| |||||||| ||||||| || | | |||| Sbjct: 1277 tcgatggcggcgccgccggagaacaccagcgcgacggtcggtatggagatctgggtctgg 1218 Query: 338 ccgctgaagtcgaagcacgtgtccaggatgctcctggccggcgccgtcgggtactgcttc 397 ||| |||||||||||||||||| |||||||||||||||||||||| | ||||||||||| Sbjct: 1217 ccggcgaagtcgaagcacgtgtcgaggatgctcctggccggcgccgaccggtactgcttc 1158 Query: 398 atgccgtccttgaacgccgtcttgagcgccgtgtacgccgtgggcggcagccgcgtgatg 457 |||||| |||||||||||| | ||||||| ||||||||| |||||||||||||||||| Sbjct: 1157 atgccggccttgaacgccgacgacagcgccgagtacgccgtcggcggcagccgcgtgatg 1098 Query: 458 atggtcccggagtccatcacggacccggcggagaagacggagggcgccacgctgagctgc 517 || || |||||||||| |||||||||||||| ||| || || |||| || | ||||||| Sbjct: 1097 atcgtgccggagtccaccacggacccggcggcgaacaccgacggcgacagcccgagctgc 1038 Query: 518 tccccgcc 525 | |||||| Sbjct: 1037 ttcccgcc 1030 Score = 40.1 bits (20), Expect = 7.6 Identities = 42/48 (87%), Gaps = 1/48 (2%) Strand = Plus / Minus Query: 9 cttacctcgcaactagaaa-aagaagacaaccacatgagagcagccta 55 ||||||||||||| | ||| ||| |||| |||||||||||||| |||| Sbjct: 1560 cttacctcgcaaccacaaacaagtagacgaccacatgagagcaaccta 1513
>ref|NM_192718.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1413 Score = 113 bits (57), Expect = 6e-22 Identities = 243/305 (79%) Strand = Plus / Minus Query: 184 ctgctgcacgttgccgatgatgccggtgcttccgtcgtcgccggtgtccgtgaacgcgag 243 ||||||||||||||||||| ||||| | |||||||| |||| || ||||||||| Sbjct: 1347 ctgctgcacgttgccgatggtgccgaaggccttgtcgtcgcgggtgggcgcgaacgcgag 1288 Query: 244 gcagctgccgaatatgatcccgttggcgtcgaggtcgacgaccttgccgccgtcgaacac 303 ||||| |||| | | ||| |||| ||||||||||||||||| ||||||| ||||||| Sbjct: 1287 gcagccgccggacacgatgccgtgcgcgtcgaggtcgacgacggcgccgccggcgaacac 1228 Query: 304 caaagcgacggtgggtatggtgacgttgtcctggccgctgaagtcgaagcacgtgtccag 363 || |||||||| |||||| |||| |||||| ||||| |||||| |||||||||||| || Sbjct: 1227 cagcgcgacggtcggtatgctgaccttgtccaggccggtgaagttgaagcacgtgtcgag 1168 Query: 364 gatgctcctggccggcgccgtcgggtactgcttcatgccgtccttgaacgccgtcttgag 423 |||| | || | |||| ||| |||| || |||| ||| | |||||||| | || Sbjct: 1167 aatgcccaggggctccgccctcgcgtaccgcgtcatcccggctcggaacgccgacgacag 1108 Query: 424 cgccgtgtacgccgtgggcggcagccgcgtgatgatggtcccggagtccatcacggaccc 483 ||||| |||||||| ||||||||||||||||| | || |||||||||| || ||||| Sbjct: 1107 cgccgcgtacgccgccggcggcagccgcgtgatcaccgtgccggagtccaccagcgaccc 1048 Query: 484 ggcgg 488 ||||| Sbjct: 1047 ggcgg 1043
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 113 bits (57), Expect = 6e-22 Identities = 243/305 (79%) Strand = Plus / Minus Query: 184 ctgctgcacgttgccgatgatgccggtgcttccgtcgtcgccggtgtccgtgaacgcgag 243 ||||||||||||||||||| ||||| | |||||||| |||| || ||||||||| Sbjct: 24015986 ctgctgcacgttgccgatggtgccgaaggccttgtcgtcgcgggtgggcgcgaacgcgag 24015927 Query: 244 gcagctgccgaatatgatcccgttggcgtcgaggtcgacgaccttgccgccgtcgaacac 303 ||||| |||| | | ||| |||| ||||||||||||||||| ||||||| ||||||| Sbjct: 24015926 gcagccgccggacacgatgccgtgcgcgtcgaggtcgacgacggcgccgccggcgaacac 24015867 Query: 304 caaagcgacggtgggtatggtgacgttgtcctggccgctgaagtcgaagcacgtgtccag 363 || |||||||| |||||| |||| |||||| ||||| |||||| |||||||||||| || Sbjct: 24015866 cagcgcgacggtcggtatgctgaccttgtccaggccggtgaagttgaagcacgtgtcgag 24015807 Query: 364 gatgctcctggccggcgccgtcgggtactgcttcatgccgtccttgaacgccgtcttgag 423 |||| | || | |||| ||| |||| || |||| ||| | |||||||| | || Sbjct: 24015806 aatgcccaggggctccgccctcgcgtaccgcgtcatcccggctcggaacgccgacgacag 24015747 Query: 424 cgccgtgtacgccgtgggcggcagccgcgtgatgatggtcccggagtccatcacggaccc 483 ||||| |||||||| ||||||||||||||||| | || |||||||||| || ||||| Sbjct: 24015746 cgccgcgtacgccgccggcggcagccgcgtgatcaccgtgccggagtccaccagcgaccc 24015687 Query: 484 ggcgg 488 ||||| Sbjct: 24015686 ggcgg 24015682
>dbj|AP003216.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0090K04 Length = 152556 Score = 113 bits (57), Expect = 6e-22 Identities = 243/305 (79%) Strand = Plus / Minus Query: 184 ctgctgcacgttgccgatgatgccggtgcttccgtcgtcgccggtgtccgtgaacgcgag 243 ||||||||||||||||||| ||||| | |||||||| |||| || ||||||||| Sbjct: 130508 ctgctgcacgttgccgatggtgccgaaggccttgtcgtcgcgggtgggcgcgaacgcgag 130449 Query: 244 gcagctgccgaatatgatcccgttggcgtcgaggtcgacgaccttgccgccgtcgaacac 303 ||||| |||| | | ||| |||| ||||||||||||||||| ||||||| ||||||| Sbjct: 130448 gcagccgccggacacgatgccgtgcgcgtcgaggtcgacgacggcgccgccggcgaacac 130389 Query: 304 caaagcgacggtgggtatggtgacgttgtcctggccgctgaagtcgaagcacgtgtccag 363 || |||||||| |||||| |||| |||||| ||||| |||||| |||||||||||| || Sbjct: 130388 cagcgcgacggtcggtatgctgaccttgtccaggccggtgaagttgaagcacgtgtcgag 130329 Query: 364 gatgctcctggccggcgccgtcgggtactgcttcatgccgtccttgaacgccgtcttgag 423 |||| | || | |||| ||| |||| || |||| ||| | |||||||| | || Sbjct: 130328 aatgcccaggggctccgccctcgcgtaccgcgtcatcccggctcggaacgccgacgacag 130269 Query: 424 cgccgtgtacgccgtgggcggcagccgcgtgatgatggtcccggagtccatcacggaccc 483 ||||| |||||||| ||||||||||||||||| | || |||||||||| || ||||| Sbjct: 130268 cgccgcgtacgccgccggcggcagccgcgtgatcaccgtgccggagtccaccagcgaccc 130209 Query: 484 ggcgg 488 ||||| Sbjct: 130208 ggcgg 130204
>ref|XM_467512.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1428 Score = 60.0 bits (30), Expect = 8e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 422 agcgccgtgtacgccgtgggcggcagccgcgtga 455 ||||||| |||||||||||||||||||||||||| Sbjct: 1124 agcgccgagtacgccgtgggcggcagccgcgtga 1091 Score = 42.1 bits (21), Expect = 1.9 Identities = 42/49 (85%) Strand = Plus / Minus Query: 342 tgaagtcgaagcacgtgtccaggatgctcctggccggcgccgtcgggta 390 |||||||| |||| ||||||||||| | | | |||||||||| |||||| Sbjct: 1210 tgaagtcgtagcaggtgtccaggatccccgtcgccggcgccgacgggta 1162
>dbj|AK108932.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-153-A08, full insert sequence Length = 1066 Score = 60.0 bits (30), Expect = 8e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 422 agcgccgtgtacgccgtgggcggcagccgcgtga 455 ||||||| |||||||||||||||||||||||||| Sbjct: 215 agcgccgagtacgccgtgggcggcagccgcgtga 182 Score = 42.1 bits (21), Expect = 1.9 Identities = 42/49 (85%) Strand = Plus / Minus Query: 342 tgaagtcgaagcacgtgtccaggatgctcctggccggcgccgtcgggta 390 |||||||| |||| ||||||||||| | | | |||||||||| |||||| Sbjct: 301 tgaagtcgtagcaggtgtccaggatccccgtcgccggcgccgacgggta 253
>ref|XM_550548.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1886 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 158 acgtcgtagagcacctcaagggtcctctgctgcacgttgccgatgatgccgg 209 |||||||| | |||||| || ||| ||||||||||||||||||||| ||||| Sbjct: 1519 acgtcgtacaccacctccagcgtcttctgctgcacgttgccgatgaagccgg 1468
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 158 acgtcgtagagcacctcaagggtcctctgctgcacgttgccgatgatgccgg 209 |||||||| | |||||| || ||| ||||||||||||||||||||| ||||| Sbjct: 1062931 acgtcgtacaccacctccagcgtcttctgctgcacgttgccgatgaagccgg 1062982 Score = 46.1 bits (23), Expect = 0.12 Identities = 44/51 (86%) Strand = Plus / Minus Query: 158 acgtcgtagagcacctcaagggtcctctgctgcacgttgccgatgatgccg 208 ||||||||||||||||| | ||| |||||||||||| ||||||| |||| Sbjct: 1154089 acgtcgtagagcacctcgtgcgtctgctgctgcacgttcccgatgaagccg 1154039 Score = 46.1 bits (23), Expect = 0.12 Identities = 44/51 (86%) Strand = Plus / Minus Query: 158 acgtcgtagagcacctcaagggtcctctgctgcacgttgccgatgatgccg 208 ||||||||||||||||| | ||| |||||||||||| ||||||| |||| Sbjct: 1137543 acgtcgtagagcacctcgtgcgtctgctgctgcacgttcccgatgaagccg 1137493 Score = 46.1 bits (23), Expect = 0.12 Identities = 65/79 (82%) Strand = Plus / Plus Query: 430 gtacgccgtgggcggcagccgcgtgatgatggtcccggagtccatcacggacccggcgga 489 ||||||||| ||||| | ||||| ||||| ||| ||||||| ||||| || | |||||| Sbjct: 977979 gtacgccgtcggcggaatccgcgagatgacggtggcggagtcgatcacagagctggcgga 978038 Query: 490 gaagacggagggcgccacg 508 |||||| | ||||| |||| Sbjct: 978039 gaagacagtgggcggcacg 978057 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 430 gtacgccgtgggcggcagccgcgtgatga 458 ||||||||| ||||||||||||| ||||| Sbjct: 1061942 gtacgccgtcggcggcagccgcgagatga 1061970
>dbj|AP003457.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0660D08 Length = 146915 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 158 acgtcgtagagcacctcaagggtcctctgctgcacgttgccgatgatgccgg 209 |||||||| | |||||| || ||| ||||||||||||||||||||| ||||| Sbjct: 39154 acgtcgtacaccacctccagcgtcttctgctgcacgttgccgatgaagccgg 39205 Score = 46.1 bits (23), Expect = 0.12 Identities = 44/51 (86%) Strand = Plus / Minus Query: 158 acgtcgtagagcacctcaagggtcctctgctgcacgttgccgatgatgccg 208 ||||||||||||||||| | ||| |||||||||||| ||||||| |||| Sbjct: 130312 acgtcgtagagcacctcgtgcgtctgctgctgcacgttcccgatgaagccg 130262 Score = 46.1 bits (23), Expect = 0.12 Identities = 44/51 (86%) Strand = Plus / Minus Query: 158 acgtcgtagagcacctcaagggtcctctgctgcacgttgccgatgatgccg 208 ||||||||||||||||| | ||| |||||||||||| ||||||| |||| Sbjct: 113766 acgtcgtagagcacctcgtgcgtctgctgctgcacgttcccgatgaagccg 113716 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 430 gtacgccgtgggcggcagccgcgtgatga 458 ||||||||| ||||||||||||| ||||| Sbjct: 38165 gtacgccgtcggcggcagccgcgagatga 38193
>dbj|AP003564.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0062J13 Length = 152837 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 158 acgtcgtagagcacctcaagggtcctctgctgcacgttgccgatgatgccgg 209 |||||||| | |||||| || ||| ||||||||||||||||||||| ||||| Sbjct: 125804 acgtcgtacaccacctccagcgtcttctgctgcacgttgccgatgaagccgg 125855 Score = 46.1 bits (23), Expect = 0.12 Identities = 65/79 (82%) Strand = Plus / Plus Query: 430 gtacgccgtgggcggcagccgcgtgatgatggtcccggagtccatcacggacccggcgga 489 ||||||||| ||||| | ||||| ||||| ||| ||||||| ||||| || | |||||| Sbjct: 40852 gtacgccgtcggcggaatccgcgagatgacggtggcggagtcgatcacagagctggcgga 40911 Query: 490 gaagacggagggcgccacg 508 |||||| | ||||| |||| Sbjct: 40912 gaagacagtgggcggcacg 40930 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 430 gtacgccgtgggcggcagccgcgtgatga 458 ||||||||| ||||||||||||| ||||| Sbjct: 124815 gtacgccgtcggcggcagccgcgagatga 124843
>dbj|AK104685.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-C01, full insert sequence Length = 1886 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 158 acgtcgtagagcacctcaagggtcctctgctgcacgttgccgatgatgccgg 209 |||||||| | |||||| || ||| ||||||||||||||||||||| ||||| Sbjct: 1519 acgtcgtacaccacctccagcgtcttctgctgcacgttgccgatgaagccgg 1468
>dbj|AK066409.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013067G18, full insert sequence Length = 1900 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 158 acgtcgtagagcacctcaagggtcctctgctgcacgttgccgatgatgccgg 209 |||||||| | |||||| || ||| ||||||||||||||||||||| ||||| Sbjct: 1511 acgtcgtacaccacctccagcgtcttctgctgcacgttgccgatgaagccgg 1460
>ref|XM_550532.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1132 Score = 46.1 bits (23), Expect = 0.12 Identities = 65/79 (82%) Strand = Plus / Minus Query: 430 gtacgccgtgggcggcagccgcgtgatgatggtcccggagtccatcacggacccggcgga 489 ||||||||| ||||| | ||||| ||||| ||| ||||||| ||||| || | |||||| Sbjct: 470 gtacgccgtcggcggaatccgcgagatgacggtggcggagtcgatcacagagctggcgga 411 Query: 490 gaagacggagggcgccacg 508 |||||| | ||||| |||| Sbjct: 410 gaagacagtgggcggcacg 392
>dbj|AP003456.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0542E10 Length = 146196 Score = 46.1 bits (23), Expect = 0.12 Identities = 44/51 (86%) Strand = Plus / Minus Query: 158 acgtcgtagagcacctcaagggtcctctgctgcacgttgccgatgatgccg 208 ||||||||||||||||| | ||| |||||||||||| ||||||| |||| Sbjct: 6042 acgtcgtagagcacctcgtgcgtctgctgctgcacgttcccgatgaagccg 5992
>dbj|AK061513.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-H02, full insert sequence Length = 1132 Score = 46.1 bits (23), Expect = 0.12 Identities = 65/79 (82%) Strand = Plus / Minus Query: 430 gtacgccgtgggcggcagccgcgtgatgatggtcccggagtccatcacggacccggcgga 489 ||||||||| ||||| | ||||| ||||| ||| ||||||| ||||| || | |||||| Sbjct: 470 gtacgccgtcggcggaatccgcgagatgacggtggcggagtcgatcacagagctggcgga 411 Query: 490 gaagacggagggcgccacg 508 |||||| | ||||| |||| Sbjct: 410 gaagacagtgggcggcacg 392
>dbj|AK058425.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-015-E01, full insert sequence Length = 1389 Score = 46.1 bits (23), Expect = 0.12 Identities = 44/51 (86%) Strand = Plus / Minus Query: 158 acgtcgtagagcacctcaagggtcctctgctgcacgttgccgatgatgccg 208 ||||||||||||||||| | ||| |||||||||||| ||||||| |||| Sbjct: 1302 acgtcgtagagcacctcgtgcgtctgctgctgcacgttcccgatgaagccg 1252
>ref|XM_749710.1| Aspergillus fumigatus Af293 cell wall protein (Afu3g08110) partial mRNA Length = 1848 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 204 tgccggtgcttccgtcgtcgcc 225 |||||||||||||||||||||| Sbjct: 813 tgccggtgcttccgtcgtcgcc 834
>gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, complete genome Length = 943016 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 269 gcgtcgaggtcgacgaccttgccgc 293 ||||||||||||||||||| ||||| Sbjct: 473436 gcgtcgaggtcgacgacctcgccgc 473460
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 276 ggtcgacgaccttgccgccgt 296 ||||||||||||||||||||| Sbjct: 1854323 ggtcgacgaccttgccgccgt 1854303
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 262 cccgttggcgtcgaggtcgacgacc 286 |||||||||||||| |||||||||| Sbjct: 4424790 cccgttggcgtcgatgtcgacgacc 4424814
>emb|AL672023.7| Mouse DNA sequence from clone RP23-339O19 on chromosome X, complete sequence Length = 160615 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 47 agcagcctagctagccaccct 67 ||||||||||||||||||||| Sbjct: 84463 agcagcctagctagccaccct 84443
>ref|XM_482621.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1356 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 493 gacggagggcgccacgctga 512 |||||||||||||||||||| Sbjct: 1221 gacggagggcgccacgctga 1202
>ref|NM_185090.1| Oryza sativa (japonica cultivar-group), mRNA Length = 691 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 266 ttggcgtcgaggtcgacgac 285 |||||||||||||||||||| Sbjct: 359 ttggcgtcgaggtcgacgac 340
>ref|XM_370399.1| Magnaporthe grisea 70-15 chromosome II hypothetical protein (MG06896.4) partial mRNA Length = 4419 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 tgctgcacgttgccgatgat 204 |||||||||||||||||||| Sbjct: 1637 tgctgcacgttgccgatgat 1618
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 266 ttggcgtcgaggtcgacgac 285 |||||||||||||||||||| Sbjct: 34587795 ttggcgtcgaggtcgacgac 34587814
>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence Length = 2580084 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 192 cgttgccgatgatgccggtg 211 |||||||||||||||||||| Sbjct: 1714102 cgttgccgatgatgccggtg 1714083
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 282 cgaccttgccgccgtcgaacacca 305 |||||||||||||||||| ||||| Sbjct: 2144233 cgaccttgccgccgtcgaccacca 2144256 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 205 gccggtgcttccgtcgtcgccggt 228 ||||||||| |||||||||||||| Sbjct: 1035581 gccggtgctgccgtcgtcgccggt 1035604
>ref|XM_548696.2| PREDICTED: Canis familiaris similar to polycystin-1L1 (LOC491575), mRNA Length = 8244 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 505 cacgctgagctgctccccgc 524 |||||||||||||||||||| Sbjct: 7105 cacgctgagctgctccccgc 7124
>ref|XM_720657.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY00619) partial mRNA Length = 4644 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 23 agaaaaagaagacaaccacatgagagca 50 ||||||| ||||||| |||||||||||| Sbjct: 3384 agaaaaacaagacaatcacatgagagca 3411
>gb|AC147407.10| Medicago truncatula clone mth2-159b14, complete sequence Length = 115857 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 agcctagctagccacccttc 69 |||||||||||||||||||| Sbjct: 85366 agcctagctagccacccttc 85347
>gb|AC133339.3| Oryza sativa chromosome 3 BAC OSJNBa0078D06 genomic sequence, complete sequence Length = 164236 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 266 ttggcgtcgaggtcgacgac 285 |||||||||||||||||||| Sbjct: 45512 ttggcgtcgaggtcgacgac 45531
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 205 gccggtgcttccgtcgtcgccggt 228 ||||||||| |||||||||||||| Sbjct: 3994431 gccggtgctgccgtcgtcgccggt 3994408
>gb|AE011718.1| Xanthomonas axonopodis pv. citri str. 306, section 96 of 469 of the complete genome Length = 12328 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 205 gccggtgcttccgtcgtcgccggt 228 ||||||||| |||||||||||||| Sbjct: 11490 gccggtgctgccgtcgtcgccggt 11513
>dbj|AP007161.1| Aspergillus oryzae RIB40 genomic DNA, SC012 Length = 2668010 Score = 40.1 bits (20), Expect = 7.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 464 ccggagtccatcacggacccggcggagaagac 495 |||||||||||||| |||||| ||| |||||| Sbjct: 1179790 ccggagtccatcactgacccgccggtgaagac 1179821
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 cgttgccgatgatgccggtg 211 |||||||||||||||||||| Sbjct: 741089 cgttgccgatgatgccggtg 741108
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 493 gacggagggcgccacgctga 512 |||||||||||||||||||| Sbjct: 21460993 gacggagggcgccacgctga 21460974
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 266 ttggcgtcgaggtcgacgac 285 |||||||||||||||||||| Sbjct: 34677867 ttggcgtcgaggtcgacgac 34677886
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 atgatcccgttggcgtcgag 276 |||||||||||||||||||| Sbjct: 8108308 atgatcccgttggcgtcgag 8108289
>gb|AE004807.1| Pseudomonas aeruginosa PAO1, section 368 of 529 of the complete genome Length = 10698 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 278 tcgacgaccttgccgccgtcgaacacca 305 |||||| ||||||||||||||| ||||| Sbjct: 9245 tcgacgcccttgccgccgtcgagcacca 9218
>gb|AC133778.4| Oryza sativa chromosome 3 BAC OSJNBb0027B08 genomic sequence, complete sequence Length = 129302 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 266 ttggcgtcgaggtcgacgac 285 |||||||||||||||||||| Sbjct: 55538 ttggcgtcgaggtcgacgac 55519
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 366 tgctcctggccggcgccgtc 385 |||||||||||||||||||| Sbjct: 2586595 tgctcctggccggcgccgtc 2586576
>dbj|AP004703.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0528B09 Length = 156897 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 493 gacggagggcgccacgctga 512 |||||||||||||||||||| Sbjct: 64988 gacggagggcgccacgctga 64969
>dbj|AP004702.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0524F03 Length = 167696 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 493 gacggagggcgccacgctga 512 |||||||||||||||||||| Sbjct: 160918 gacggagggcgccacgctga 160899
>dbj|AK108225.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-140-F03, full insert sequence Length = 1141 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 493 gacggagggcgccacgctga 512 |||||||||||||||||||| Sbjct: 782 gacggagggcgccacgctga 763
>dbj|AK107563.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-130-C02, full insert sequence Length = 827 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 266 ttggcgtcgaggtcgacgac 285 |||||||||||||||||||| Sbjct: 369 ttggcgtcgaggtcgacgac 350
>emb|AL808147.21| Mouse DNA sequence from clone RP23-80N9 on chromosome 4, complete sequence Length = 233270 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 aaaagaagacaaccacatga 45 |||||||||||||||||||| Sbjct: 208368 aaaagaagacaaccacatga 208349
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 205 gccggtgcttccgtcgtcgccggt 228 ||||||||| |||||||||||||| Sbjct: 3996724 gccggtgctgccgtcgtcgccggt 3996701
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 cgttgccgatgatgccggtg 211 |||||||||||||||||||| Sbjct: 2118804 cgttgccgatgatgccggtg 2118823
>emb|CT030168.3| M.truncatula DNA sequence from clone MTH2-16A18 on chromosome 3, complete sequence Length = 125291 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 agcctagctagccacccttc 69 |||||||||||||||||||| Sbjct: 109803 agcctagctagccacccttc 109822
>emb|AL808121.7| Zebrafish DNA sequence from clone CH211-251B22, complete sequence Length = 154450 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 aaagaagacaaccacatgag 46 |||||||||||||||||||| Sbjct: 29661 aaagaagacaaccacatgag 29642 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,415,611 Number of Sequences: 3902068 Number of extensions: 3415611 Number of successful extensions: 75794 Number of sequences better than 10.0: 57 Number of HSP's better than 10.0 without gapping: 57 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 74407 Number of HSP's gapped (non-prelim): 1379 length of query: 558 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 535 effective length of database: 17,143,297,704 effective search space: 9171664271640 effective search space used: 9171664271640 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
