ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd22e21 |
|---|---|
| Clone Library Name | barley_pub |
>MA122_DROME (P53625) Mannosyl-oligosaccharide alpha-1,2-mannosidase isoform 2| (EC 3.2.1.113) (Man(9)-alpha-mannosidase) Length = 643 Score = 89.7 bits (221), Expect = 6e-18 Identities = 49/74 (66%), Positives = 53/74 (71%), Gaps = 2/74 (2%) Frame = -3 Query: 619 AFEKNSRIASGYVGLRDVNSGE--KDDKMQSFFLAETLKYLYLLFSPPSVVSFDEWVFNT 446 A EK+ R A GY GLR+V E KDD QSFFLAETLKYLYLLFS SV+ DEWVFNT Sbjct: 557 ALEKHCRTAHGYCGLRNVYQQEPQKDDVQQSFFLAETLKYLYLLFSDDSVLPLDEWVFNT 616 Query: 445 EAHPLRIVPTHGSN 404 EAHPL P G+N Sbjct: 617 EAHPL---PIKGAN 627
>MA121_DROME (P53624) Mannosyl-oligosaccharide alpha-1,2-mannosidase isoform 1| (EC 3.2.1.113) (Man(9)-alpha-mannosidase) Length = 667 Score = 89.7 bits (221), Expect = 6e-18 Identities = 49/74 (66%), Positives = 53/74 (71%), Gaps = 2/74 (2%) Frame = -3 Query: 619 AFEKNSRIASGYVGLRDVNSGE--KDDKMQSFFLAETLKYLYLLFSPPSVVSFDEWVFNT 446 A EK+ R A GY GLR+V E KDD QSFFLAETLKYLYLLFS SV+ DEWVFNT Sbjct: 581 ALEKHCRTAHGYCGLRNVYQQEPQKDDVQQSFFLAETLKYLYLLFSDDSVLPLDEWVFNT 640 Query: 445 EAHPLRIVPTHGSN 404 EAHPL P G+N Sbjct: 641 EAHPL---PIKGAN 651
>MA1A1_PIG (O02773) Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA (EC| 3.2.1.113) (Processing alpha-1,2-mannosidase IA) (Alpha-1,2-mannosidase IA) (Mannosidase alpha class 1A member 1) (Man(9)-alpha-mannosidase) (Man9-mannosidase) Length = 659 Score = 81.3 bits (199), Expect = 2e-15 Identities = 39/69 (56%), Positives = 50/69 (72%), Gaps = 2/69 (2%) Frame = -3 Query: 622 EAFEKNSRIASGYVGLRDV--NSGEKDDKMQSFFLAETLKYLYLLFSPPSVVSFDEWVFN 449 EA EK+ R+ GY GLRDV ++ DD QSFFLAETLKYLYL+FS ++ + W+FN Sbjct: 579 EALEKHCRVNGGYSGLRDVYVSAQTYDDVQQSFFLAETLKYLYLIFSDDDLLPLEHWIFN 638 Query: 448 TEAHPLRIV 422 TEAHPL ++ Sbjct: 639 TEAHPLPVL 647
>MA1C1_HUMAN (Q9NR34) Mannosyl-oligosaccharide 1,2-alpha-mannosidase IC (EC| 3.2.1.113) (Processing alpha-1,2-mannosidase IC) (Alpha-1,2-mannosidase IC) (Mannosidase alpha class 1C member 1) (HMIC) Length = 630 Score = 79.3 bits (194), Expect = 8e-15 Identities = 39/67 (58%), Positives = 49/67 (73%), Gaps = 2/67 (2%) Frame = -3 Query: 619 AFEKNSRIASGYVGLRDVNSG--EKDDKMQSFFLAETLKYLYLLFSPPSVVSFDEWVFNT 446 A EK R +G+ G++DV S D+K QSFFLAETLKYLYLLFS ++S ++WVFNT Sbjct: 551 ALEKYCRTEAGFSGIQDVYSSTPNHDNKQQSFFLAETLKYLYLLFSEDDLLSLEDWVFNT 610 Query: 445 EAHPLRI 425 EAHPL + Sbjct: 611 EAHPLPV 617
>MA1A1_MOUSE (P45700) Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA (EC| 3.2.1.113) (Processing alpha-1,2-mannosidase IA) (Alpha-1,2-mannosidase IA) (Mannosidase alpha class 1A member 1) (Man(9)-alpha-mannosidase) (Man9-mannosidase) Length = 655 Score = 78.2 bits (191), Expect = 2e-14 Identities = 38/69 (55%), Positives = 47/69 (68%), Gaps = 2/69 (2%) Frame = -3 Query: 622 EAFEKNSRIASGYVGLRDVNSGEK--DDKMQSFFLAETLKYLYLLFSPPSVVSFDEWVFN 449 EA E + R+ GY GLRDV + DD QSFFLAETLKYLYL+FS ++ + W+FN Sbjct: 575 EALESHCRVNGGYSGLRDVYIARESYDDVQQSFFLAETLKYLYLIFSDDDLLPLEHWIFN 634 Query: 448 TEAHPLRIV 422 TEAHP I+ Sbjct: 635 TEAHPFPIL 643
>MA1A1_RABIT (P45701) Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA (EC| 3.2.1.113) (Processing alpha-1,2-mannosidase IA) (Alpha-1,2-mannosidase IA) (Mannosidase alpha class 1A member 1) (Man(9)-alpha-mannosidase) (Fragment) Length = 469 Score = 78.2 bits (191), Expect = 2e-14 Identities = 41/71 (57%), Positives = 51/71 (71%), Gaps = 2/71 (2%) Frame = -3 Query: 622 EAFEKNSRIASGYVGLRDVN-SGEK-DDKMQSFFLAETLKYLYLLFSPPSVVSFDEWVFN 449 EA E + R+ GY GLRDV + EK D+ QSFFLAETLKYLYL+FS ++ + W+FN Sbjct: 389 EALESHCRVNGGYSGLRDVYFTHEKYDNVQQSFFLAETLKYLYLIFSDDDLLPLEHWIFN 448 Query: 448 TEAHPLRIVPT 416 TEAH L I+PT Sbjct: 449 TEAHLLPILPT 459
>MA1A2_MOUSE (P39098) Mannosyl-oligosaccharide 1,2-alpha-mannosidase IB (EC| 3.2.1.113) (Processing alpha-1,2-mannosidase IB) (Alpha-1,2-mannosidase IB) (Mannosidase alpha class 1A member 2) Length = 641 Score = 78.2 bits (191), Expect = 2e-14 Identities = 38/68 (55%), Positives = 49/68 (72%), Gaps = 2/68 (2%) Frame = -3 Query: 619 AFEKNSRIASGYVGLRDVNSGEK--DDKMQSFFLAETLKYLYLLFSPPSVVSFDEWVFNT 446 A EK+ R++ G+ G++DV + DD QSFFLAETLKYLYLLFS ++ D WVFNT Sbjct: 560 AIEKSCRVSGGFSGVKDVYAPTPVHDDVQQSFFLAETLKYLYLLFSGDDLLPLDHWVFNT 619 Query: 445 EAHPLRIV 422 EAHPL ++ Sbjct: 620 EAHPLPVL 627
>MA1A2_HUMAN (O60476) Mannosyl-oligosaccharide 1,2-alpha-mannosidase IB (EC| 3.2.1.113) (Processing alpha-1,2-mannosidase IB) (Alpha-1,2-mannosidase IB) (Mannosidase alpha class 1A member 2) Length = 641 Score = 77.8 bits (190), Expect = 2e-14 Identities = 39/68 (57%), Positives = 47/68 (69%), Gaps = 2/68 (2%) Frame = -3 Query: 619 AFEKNSRIASGYVGLRDVNSGEK--DDKMQSFFLAETLKYLYLLFSPPSVVSFDEWVFNT 446 A EK R+ G+ G++DV S DD QSFFLAETLKYLYLLFS ++ D WVFNT Sbjct: 560 AIEKYCRVNGGFSGVKDVYSSTPTHDDVQQSFFLAETLKYLYLLFSGDDLLPLDHWVFNT 619 Query: 445 EAHPLRIV 422 EAHPL ++ Sbjct: 620 EAHPLPVL 627
>MA1A1_HUMAN (P33908) Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA (EC| 3.2.1.113) (Processing alpha-1,2-mannosidase IA) (Alpha-1,2-mannosidase IA) (Mannosidase alpha class 1A member 1) (Man(9)-alpha-mannosidase) (Man9-mannosidase) Length = 653 Score = 75.5 bits (184), Expect = 1e-13 Identities = 38/70 (54%), Positives = 48/70 (68%), Gaps = 2/70 (2%) Frame = -3 Query: 622 EAFEKNSRIASGYVGLRDVNSGEK--DDKMQSFFLAETLKYLYLLFSPPSVVSFDEWVFN 449 EA E + R+ GY GLRDV + DD QSFFLAETLKYLYL+FS ++ + W+FN Sbjct: 573 EALENHCRVNGGYSGLRDVYLLHESYDDVQQSFFLAETLKYLYLIFSDDDLLPLEHWIFN 632 Query: 448 TEAHPLRIVP 419 +EAH L I+P Sbjct: 633 SEAHLLPILP 642
>MA1B1_HUMAN (Q9UKM7) Endoplasmic reticulum mannosyl-oligosaccharide| 1,2-alpha-mannosidase (EC 3.2.1.113) (ER alpha-1,2-mannosidase) (Mannosidase alpha class 1B member 1) (Man9GlcNAc2-specific-processing alpha-mannosidase) Length = 699 Score = 68.2 bits (165), Expect = 2e-11 Identities = 37/73 (50%), Positives = 52/73 (71%), Gaps = 5/73 (6%) Frame = -3 Query: 628 VKEAFEKNSRIASG-YVGLRDVNSGEKD---DKMQSFFLAETLKYLYLLFS-PPSVVSFD 464 + ++F + +R+ SG Y + +V +K DKM+SFFL ETLKYL+LLFS P+++S D Sbjct: 623 ILQSFSRFTRVPSGGYSSINNVQDPQKPEPRDKMESFFLGETLKYLFLLFSDDPNLLSLD 682 Query: 463 EWVFNTEAHPLRI 425 +VFNTEAHPL I Sbjct: 683 AYVFNTEAHPLPI 695
>EDEM3_HUMAN (Q9BZQ6) ER degradation-enhancing alpha-mannosidase-like 3| Length = 889 Score = 64.3 bits (155), Expect = 3e-10 Identities = 33/76 (43%), Positives = 48/76 (63%), Gaps = 4/76 (5%) Frame = -3 Query: 622 EAFEKNSRIASGYVGLRDVNSGEKDDKMQSFFLAETLKYLYLLFSPPSVVSFD--EWVFN 449 E K +R+ G+ ++DV +G +D+M SFFLAE KYLYLLF+ + FD +++F Sbjct: 388 ENLNKYARVPCGFAAMKDVRTGSHEDRMDSFFLAEMFKYLYLLFADKEDIIFDIEDYIFT 447 Query: 448 TEAH--PLRIVPTHGS 407 TEAH PL + T+ S Sbjct: 448 TEAHLLPLWLSTTNQS 463
>EDEM2_HUMAN (Q9BV94) ER degradation-enhancing alpha-mannosidase-like 2| precursor Length = 578 Score = 63.2 bits (152), Expect = 6e-10 Identities = 33/89 (37%), Positives = 51/89 (57%), Gaps = 19/89 (21%) Frame = -3 Query: 622 EAFEKNSRIASGYVGLRDVNSGEKDDKMQSFFLAETLKYLYLLFSPPSVV-----SFDE- 461 E+ EK S++ G+ ++D+ + D++M+SFFLAET+KYLYLLF P + + +FD Sbjct: 398 ESIEKISKVECGFATIKDLRDHKLDNRMESFFLAETVKYLYLLFDPTNFIHNNGSTFDAV 457 Query: 460 -------------WVFNTEAHPLRIVPTH 413 ++FNTEAHP+ H Sbjct: 458 ITPYGECILGAGGYIFNTEAHPIDPAALH 486
>YH04_YEAST (P38888) Protein YHR204W| Length = 796 Score = 57.0 bits (136), Expect = 5e-08 Identities = 29/68 (42%), Positives = 46/68 (67%), Gaps = 2/68 (2%) Frame = -3 Query: 628 VKEAFEKNSRIASGYVGLRDVNSGEKDDKMQSFFLAETLKYLYLLFSPPSVV--SFDEWV 455 +K+ F+ N G+ G ++V +GE D+M++F L+ETLKYLYLLF + + S + + Sbjct: 437 LKQRFKSNC----GFAGFQNVITGELQDRMETFVLSETLKYLYLLFDEENELHNSASDVI 492 Query: 454 FNTEAHPL 431 F+TEAHP+ Sbjct: 493 FSTEAHPM 500
>EDEM1_MOUSE (Q925U4) ER degradation-enhancing alpha-mannosidase-like 1| Length = 652 Score = 56.2 bits (134), Expect = 8e-08 Identities = 28/70 (40%), Positives = 43/70 (61%), Gaps = 2/70 (2%) Frame = -3 Query: 628 VKEAFEKNSRIASGYVGLRDVNSGEKDDKMQSFFLAETLKYLYLLFSPPSVV--SFDEWV 455 + ++ EK +++ GY L V K+D+M+SFFL+ET KYLYLLF + V S ++ Sbjct: 512 ILQSLEKYTKVKCGYATLHHVIDKSKEDRMESFFLSETCKYLYLLFDEENPVHKSGTRYM 571 Query: 454 FNTEAHPLRI 425 F TE H + + Sbjct: 572 FTTEGHIISV 581
>EDEM1_HUMAN (Q92611) ER degradation-enhancing alpha-mannosidase-like 1| Length = 657 Score = 53.5 bits (127), Expect = 5e-07 Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 2/66 (3%) Frame = -3 Query: 628 VKEAFEKNSRIASGYVGLRDVNSGEKDDKMQSFFLAETLKYLYLLFSPPSVV--SFDEWV 455 + ++ EK +++ GY L V +D+M+SFFL+ET KYLYLLF + V S ++ Sbjct: 517 ILQSLEKYTKVKCGYATLHHVIDKSTEDRMESFFLSETCKYLYLLFDEDNPVHKSGTRYM 576 Query: 454 FNTEAH 437 F TE H Sbjct: 577 FTTEGH 582
>MNS1_CANAL (Q8J0Q0) Mannosyl-oligosaccharide 1,2-alpha-mannosidase (EC| 3.2.1.113) (Man(9)-alpha-mannosidase) Length = 565 Score = 51.6 bits (122), Expect = 2e-06 Identities = 28/64 (43%), Positives = 37/64 (57%), Gaps = 6/64 (9%) Frame = -3 Query: 607 NSRIASGYVGLRDVNSGEKD------DKMQSFFLAETLKYLYLLFSPPSVVSFDEWVFNT 446 NS + L DV S + + D +SF+ AETLKYLYLLF + + ++VFNT Sbjct: 442 NSEGEVSFSSLSDVTSFDSNGLPKFKDNTESFWWAETLKYLYLLFDDTNKIPLTDYVFNT 501 Query: 445 EAHP 434 EAHP Sbjct: 502 EAHP 505
>MNS1_YEAST (P32906) Endoplasmic reticulum mannosyl-oligosaccharide| 1,2-alpha-mannosidase (EC 3.2.1.113) (ER alpha-1,2-mannosidase) (Man(9)-alpha-mannosidase) Length = 549 Score = 49.3 bits (116), Expect = 9e-06 Identities = 28/59 (47%), Positives = 38/59 (64%), Gaps = 2/59 (3%) Frame = -3 Query: 556 EKDDKMQSFFLAETLKYLYLLFSPPSVVSFD--EWVFNTEAHPLRIVPTHGSNGQSIET 386 +K + M+SF+LAETLKYLY+LF + FD + VFNTEAHP ++ QS+ T Sbjct: 491 KKSNNMESFWLAETLKYLYILF----LDEFDLTKVVFNTEAHPFPVLDEEILKSQSLTT 545
>YKU1_SCHPO (Q9P7C3) Putative mannosyl-oligosaccharide 1,2-alpha-mannosidase| (EC 3.2.1.113) (Man(9)-alpha-mannosidase) Length = 521 Score = 48.5 bits (114), Expect = 2e-05 Identities = 23/42 (54%), Positives = 30/42 (71%), Gaps = 1/42 (2%) Frame = -3 Query: 556 EKDDKMQSFFLAETLKYLYLLFSPP-SVVSFDEWVFNTEAHP 434 ++ DK +SF+ AETLKYLYLLF S++ + FNTEAHP Sbjct: 467 DQRDKTESFWFAETLKYLYLLFEDDFSILPLTNYTFNTEAHP 508
>MAN12_PENCI (P31723) Mannosyl-oligosaccharide alpha-1,2-mannosidase precursor| (EC 3.2.1.113) (Man(9)-alpha-mannosidase) Length = 511 Score = 45.8 bits (107), Expect = 1e-04 Identities = 26/73 (35%), Positives = 36/73 (49%), Gaps = 8/73 (10%) Frame = -3 Query: 619 AFEKNSRIASGYVGLRDVNS---GEKDDKMQSFFLAETLKYLYLLFSPPSVVSFDE---- 461 A R SG+ + DVN G K D +SF AE +KY YL S + + Sbjct: 436 AINSTCRTDSGFAAVSDVNKANGGSKYDNQESFLFAEVMKYSYLAHSEDAAWQVQKGGKN 495 Query: 460 -WVFNTEAHPLRI 425 +V+NTEAHP+ + Sbjct: 496 TFVYNTEAHPISV 508 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 86,903,529 Number of Sequences: 219361 Number of extensions: 1669835 Number of successful extensions: 3343 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 3260 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3331 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5824436538 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
