ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd22e12 |
|---|---|
| Clone Library Name | barley_pub |
>F10A1_PONPY (Q5RF31) Hsc70-interacting protein (Hip) (Protein ST13 homolog)| (Protein FAM10A1) Length = 369 Score = 67.8 bits (164), Expect = 2e-11 Identities = 30/59 (50%), Positives = 44/59 (74%) Frame = -1 Query: 498 GNVDMGDILNDPDLMSAFGDPEVMAALQDVMSNPANLAKHQANPKVGPIIAKMMAKMNG 322 G + +IL+DP++++A DPEVM A QDV NPAN++K+Q+NPKV +I+K+ AK G Sbjct: 309 GMPGLNEILSDPEVLAAMQDPEVMVAFQDVAQNPANMSKYQSNPKVMNLISKLSAKFGG 367
>F10A1_HUMAN (P50502) Hsc70-interacting protein (Hip) (Suppression of| tumorigenicity protein 13) (Putative tumor suppressor ST13) (Protein FAM10A1) (Progesterone receptor-associated p48 protein) (NY-REN-33 antigen) Length = 369 Score = 67.8 bits (164), Expect = 2e-11 Identities = 30/59 (50%), Positives = 44/59 (74%) Frame = -1 Query: 498 GNVDMGDILNDPDLMSAFGDPEVMAALQDVMSNPANLAKHQANPKVGPIIAKMMAKMNG 322 G + +IL+DP++++A DPEVM A QDV NPAN++K+Q+NPKV +I+K+ AK G Sbjct: 309 GMPGLNEILSDPEVLAAMQDPEVMVAFQDVAQNPANMSKYQSNPKVMNLISKLSAKFGG 367
>F10A5_HUMAN (Q8NFI4) Protein FAM10A5| Length = 369 Score = 67.0 bits (162), Expect = 3e-11 Identities = 30/59 (50%), Positives = 43/59 (72%) Frame = -1 Query: 498 GNVDMGDILNDPDLMSAFGDPEVMAALQDVMSNPANLAKHQANPKVGPIIAKMMAKMNG 322 G + +IL+DP+ ++A DPEVM A QDV NPAN++K+Q+NPKV +I+K+ AK G Sbjct: 309 GMPGLNEILSDPEALAAMQDPEVMVAFQDVAQNPANMSKYQSNPKVMNLISKLSAKFGG 367
>F10A1_MOUSE (Q99L47) Hsc70-interacting protein (Hip) (Protein ST13 homolog)| (Protein FAM10A1) Length = 371 Score = 66.6 bits (161), Expect = 3e-11 Identities = 29/59 (49%), Positives = 44/59 (74%) Frame = -1 Query: 498 GNVDMGDILNDPDLMSAFGDPEVMAALQDVMSNPANLAKHQANPKVGPIIAKMMAKMNG 322 G + +IL+DP++++A DPEVM A QDV NP+N++K+Q+NPKV +I+K+ AK G Sbjct: 311 GMPGLNEILSDPEVLAAMQDPEVMVAFQDVAQNPSNMSKYQSNPKVMNLISKLSAKFGG 369
>F10A1_RAT (P50503) Hsc70-interacting protein (Hip) (Protein ST13 homolog)| (Protein FAM10A1) Length = 368 Score = 65.9 bits (159), Expect = 6e-11 Identities = 29/60 (48%), Positives = 44/60 (73%) Frame = -1 Query: 498 GNVDMGDILNDPDLMSAFGDPEVMAALQDVMSNPANLAKHQANPKVGPIIAKMMAKMNGN 319 G + +IL+DP++++A DPEVM A QDV NP+N++K+Q NPKV +I+K+ AK G+ Sbjct: 308 GMPGLNEILSDPEVLAAMQDPEVMVAFQDVAQNPSNMSKYQNNPKVMNLISKLSAKFGGH 367
>F10A1_CHICK (Q5ZLF0) Hsc70-interacting protein (Hip) (Protein ST13 homolog)| (Protein FAM10A1) Length = 361 Score = 65.9 bits (159), Expect = 6e-11 Identities = 30/56 (53%), Positives = 42/56 (75%) Frame = -1 Query: 498 GNVDMGDILNDPDLMSAFGDPEVMAALQDVMSNPANLAKHQANPKVGPIIAKMMAK 331 G + +IL+DP++++A DPEVMAA QDV NPAN++K+Q NPKV +I K+ AK Sbjct: 301 GMPGLNEILSDPEVLAAMQDPEVMAAFQDVAQNPANMSKYQNNPKVMSLITKLSAK 356
>STI1_SCHPO (Q9USI5) Heat shock protein sti1 homolog| Length = 591 Score = 38.5 bits (88), Expect = 0.010 Identities = 19/51 (37%), Positives = 26/51 (50%) Frame = -1 Query: 486 MGDILNDPDLMSAFGDPEVMAALQDVMSNPANLAKHQANPKVGPIIAKMMA 334 M I DP+++ DP + A L NPA L +H NP V I K++A Sbjct: 534 MARIQKDPEVLGILQDPAMQAILGQARENPAALMEHMKNPTVKSKIEKLIA 584
>STI1_YEAST (P15705) Heat shock protein STI1| Length = 589 Score = 36.2 bits (82), Expect = 0.050 Identities = 16/47 (34%), Positives = 26/47 (55%) Frame = -1 Query: 474 LNDPDLMSAFGDPEVMAALQDVMSNPANLAKHQANPKVGPIIAKMMA 334 + DP++ + DP + + LQ NPA L +H NP+V I ++A Sbjct: 535 MKDPEVAAIMQDPVMQSILQQAQQNPAALQEHMKNPEVFKKIQTLIA 581
>HRP_PLABE (Q08168) 58 kDa phosphoprotein (Heat shock-related protein) (HRP)| Length = 423 Score = 36.2 bits (82), Expect = 0.050 Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 4/60 (6%) Frame = -1 Query: 474 LNDPDLMSAFGDPEVMAALQDVMSNPANLAKHQANPKVGPIIAKM----MAKMNGNR*KP 307 LN P++ F +P+ +Q++MSNP + K+ ++PK I + + M G + KP Sbjct: 364 LNSPEMKELFNNPQFFQMMQNMMSNPDLINKYASDPKYKNIFENLKNSDLGGMMGEKPKP 423
>STIP1_RAT (O35814) Stress-induced-phosphoprotein 1 (STI1)| (Hsc70/Hsp90-organizing protein) (Hop) Length = 543 Score = 32.7 bits (73), Expect = 0.55 Identities = 13/44 (29%), Positives = 23/44 (52%) Frame = -1 Query: 468 DPDLMSAFGDPEVMAALQDVMSNPANLAKHQANPKVGPIIAKMM 337 DP++ DP + L+ + +P L++H NP + I K+M Sbjct: 492 DPEVQQIMSDPAMRLILEQMQKDPQALSEHLKNPVIAQKIQKLM 535
>STIP1_MOUSE (Q60864) Stress-induced-phosphoprotein 1 (STI1)| (Hsc70/Hsp90-organizing protein) (Hop) (mSTI1) Length = 543 Score = 32.7 bits (73), Expect = 0.55 Identities = 13/44 (29%), Positives = 23/44 (52%) Frame = -1 Query: 468 DPDLMSAFGDPEVMAALQDVMSNPANLAKHQANPKVGPIIAKMM 337 DP++ DP + L+ + +P L++H NP + I K+M Sbjct: 492 DPEVQQIMSDPAMRLILEQMQKDPQALSEHLKNPVIAQKIQKLM 535
>STIP1_HUMAN (P31948) Stress-induced-phosphoprotein 1 (STI1)| (Hsc70/Hsp90-organizing protein) (Hop) (Transformation-sensitive protein IEF SSP 3521) (NY-REN-11 antigen) Length = 543 Score = 32.7 bits (73), Expect = 0.55 Identities = 13/44 (29%), Positives = 23/44 (52%) Frame = -1 Query: 468 DPDLMSAFGDPEVMAALQDVMSNPANLAKHQANPKVGPIIAKMM 337 DP++ DP + L+ + +P L++H NP + I K+M Sbjct: 492 DPEVQQIMSDPAMRLILEQMQKDPQALSEHLKNPVIAQKIQKLM 535
>STIP1_CRIGR (O54981) Stress-induced-phosphoprotein 1 (STI1)| (Hsc70/Hsp90-organizing protein) (Hop) Length = 543 Score = 32.7 bits (73), Expect = 0.55 Identities = 13/44 (29%), Positives = 23/44 (52%) Frame = -1 Query: 468 DPDLMSAFGDPEVMAALQDVMSNPANLAKHQANPKVGPIIAKMM 337 DP++ DP + L+ + +P L++H NP + I K+M Sbjct: 492 DPEVQQIMSDPAMRLILEQMQKDPQALSEHLKNPVIAQKIQKLM 535
>CATA_MYCFO (O08404) Peroxidase/catalase 1 (EC 1.11.1.6) (Catalase-peroxidase| 1) Length = 752 Score = 32.7 bits (73), Expect = 0.55 Identities = 18/50 (36%), Positives = 28/50 (56%) Frame = +2 Query: 56 P*NPQASADCRPPQVQVQVHYHYLLPTYNKKPGMKSPIQQAPLHASITNQ 205 P N ++D RPPQ + H H + ++ P ++SP +A HA +TNQ Sbjct: 2 PPNTPDASDARPPQADTETHSH----SESENPVIESPKPKA--HAPLTNQ 45
>ADEC_SILPO (Q5LM18) Adenine deaminase (EC 3.5.4.2) (Adenase) (Adenine aminase)| Length = 592 Score = 31.2 bits (69), Expect = 1.6 Identities = 15/55 (27%), Positives = 30/55 (54%) Frame = -1 Query: 498 GNVDMGDILNDPDLMSAFGDPEVMAALQDVMSNPANLAKHQANPKVGPIIAKMMA 334 G + +G+++N P + +A DP+++A + + H A+P +GP A +A Sbjct: 167 GIIGLGEMMNFPGVTNA--DPKMLAEIAATQRAGKTVGGHYASPDLGPAFAAYVA 219
>GCN1L_HUMAN (Q92616) GCN1-like protein 1 (HsGCN1)| Length = 2670 Score = 30.8 bits (68), Expect = 2.1 Identities = 18/47 (38%), Positives = 29/47 (61%), Gaps = 2/47 (4%) Frame = -1 Query: 459 LMSAFGDPEVMAALQDVMSNPANLAKH--QANPKVGPIIAKMMAKMN 325 L +A D A Q V+ +LAKH +++PKV PI+AK++A ++ Sbjct: 1302 LKNAPNDASYDAVRQSVVVLMGSLAKHLDKSDPKVKPIVAKLIAALS 1348
>STIP_SOYBN (Q43468) Heat shock protein STI (Stress-inducible protein) (GmSTI)| Length = 569 Score = 30.8 bits (68), Expect = 2.1 Identities = 13/38 (34%), Positives = 18/38 (47%) Frame = -1 Query: 474 LNDPDLMSAFGDPEVMAALQDVMSNPANLAKHQANPKV 361 + DP++ S DP + L D NP +H NP V Sbjct: 517 MQDPEIQSILQDPVMTQVLTDFQENPRAAEEHVKNPMV 554
>INO80_ASPFU (Q4WTV7) Putative DNA helicase ino80 (EC 3.6.1.-)| Length = 1708 Score = 29.6 bits (65), Expect = 4.7 Identities = 12/41 (29%), Positives = 24/41 (58%) Frame = +2 Query: 200 NQHLHVSGYAKGHFQHLTKVFCPAADRKTVGHEGSWGFHRF 322 N+H +G+ + QHL +F P ++++ +G++ F RF Sbjct: 1194 NEH---AGFRGKYLQHLMNIFTPENIKRSIDEDGAFSFLRF 1231
>RPB1_ENCCU (Q8SSC4) DNA-directed RNA polymerase II largest subunit (EC| 2.7.7.6) (RNA polymerase II subunit 1) Length = 1599 Score = 29.6 bits (65), Expect = 4.7 Identities = 20/97 (20%), Positives = 40/97 (41%), Gaps = 25/97 (25%) Frame = +3 Query: 24 IINRELLSHRLRKTLKHPQTVGHRKFKFKFTITTYYQH---------------------- 137 + NR+ H++ + + +G++ F+ ++T+ Y Sbjct: 412 LFNRQPSLHKMSMMAHYARVMGNKTFRLNLSVTSPYNADFDGDEMNLHMPQSYTSKAELE 471 Query: 138 ---IIKSQA*NPQSNKRLCTLVSPTNTCMSLDTQKDT 239 ++ Q +PQSNK + +V T T + L T +DT Sbjct: 472 ELALVSRQIISPQSNKPVMGIVQDTLTGLRLFTLRDT 508
>SYI_SYNEL (Q8DGI7) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA| ligase) (IleRS) Length = 953 Score = 29.6 bits (65), Expect = 4.7 Identities = 26/114 (22%), Positives = 45/114 (39%), Gaps = 1/114 (0%) Frame = +2 Query: 5 VTSSPPNYKQGTTVASSP*NPQASADCRPPQVQVQVHYHYLLPTYNK-KPGMKSPIQQAP 181 +T + P+YK + + +A+A R PQ+Q H + T + PG + P Sbjct: 1 MTDATPDYKDTVNLPQTTFEMRANAATREPQLQAFWAQHKIYETLQQTNPGEVFILHDGP 60 Query: 182 LHASITNQHLHVSGYAKGHFQHLTKVFCPAADRKTVGHEGSWGFHRFPFILAII 343 +A N LH+ + + + RK V + W H P L ++ Sbjct: 61 PYA---NGALHIGHALNKILKDIINKYQLLRGRK-VHYRPGWDCHGLPIELKVL 110
>ZHX3_RAT (Q80Z36) Zinc finger and homeobox protein 3 (Fragment)| Length = 522 Score = 28.9 bits (63), Expect = 7.9 Identities = 18/65 (27%), Positives = 27/65 (41%), Gaps = 3/65 (4%) Frame = +2 Query: 2 AVTSSPPNYKQGTTVASSP*NPQASAD---CRPPQVQVQVHYHYLLPTYNKKPGMKSPIQ 172 A ++ PP+ G + + P P A + P V Q H H LPT P + P+ Sbjct: 126 ANSTKPPHTANGPLIGTVPVLPAGIAQFLSLQQPTVHPQHHPHQPLPTSKALPKVMIPLS 185 Query: 173 QAPLH 187 P + Sbjct: 186 SIPTY 190
>FP1_MYTCO (Q25434) Adhesive plaque matrix protein precursor (Foot protein 1)| (MCFP1) Length = 872 Score = 28.9 bits (63), Expect = 7.9 Identities = 20/62 (32%), Positives = 29/62 (46%) Frame = +2 Query: 11 SSPPNYKQGTTVASSP*NPQASADCRPPQVQVQVHYHYLLPTYNKKPGMKSPIQQAPLHA 190 S PP YK T + P+ S PP + ++ Y PTY +KP +P +Q P + Sbjct: 457 SYPPTYKPKITYPPTY-KPKPSY---PPTYKPKITYP---PTYKRKPSYPTPYKQKPSYP 509 Query: 191 SI 196 I Sbjct: 510 PI 511
>AUR1_CANAL (O13332) Aureobasidin A resistance protein homolog| Length = 471 Score = 28.9 bits (63), Expect = 7.9 Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 5/35 (14%) Frame = +2 Query: 320 FPFILAIILAMMGP-----TFGLAWCLAKLAGLLI 409 FPF+LA I+ + GP +FG A+ L G+LI Sbjct: 173 FPFVLAAIIFLFGPPTALRSFGFAFGYMNLLGVLI 207 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 74,239,784 Number of Sequences: 219361 Number of extensions: 1549433 Number of successful extensions: 4475 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 4334 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4467 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3523384522 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
