Clone Name | rbasd21p04 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | PRF1_LYCES (Q00451) 36.4 kDa proline-rich protein | 112 | 1e-24 | 2 | CCDP_MAIZE (Q01595) Cortical cell-delineating protein precursor ... | 85 | 2e-16 | 3 | 14KD_DAUCA (P14009) 14 kDa proline-rich protein DC2.15 precursor | 82 | 2e-15 | 4 | HPSE_SOYBN (P24337) Hydrophobic seed protein (HPS) (Allergen Gly... | 50 | 8e-06 |
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>PRF1_LYCES (Q00451) 36.4 kDa proline-rich protein| Length = 346 Score = 112 bits (279), Expect = 1e-24 Identities = 50/84 (59%), Positives = 61/84 (72%) Frame = -2 Query: 369 CPIDTLXLLGCVDALDGLLHALIGSNASDKCCPLLSGVADLXAALCLCTTIKLKALNINL 190 CPID L L CVD L GL+H IG +A CCPLL G+ DL AA+CLCTTI+LK LNIN+ Sbjct: 261 CPIDALKLGACVDVLGGLIHIGIGGSAKQTCCPLLGGLVDLDAAICLCTTIRLKLLNINI 320 Query: 189 VLPXAIEVLVNQCGKTVPDDFTVP 118 +LP A++VL++ CGK P DF P Sbjct: 321 ILPIALQVLIDDCGKYPPKDFKCP 344 Score = 34.7 bits (78), Expect = 0.28 Identities = 14/23 (60%), Positives = 16/23 (69%) Frame = -1 Query: 685 AFCXCTTXELKALNINFVFPIAI 617 A C CTT LK LNIN + PIA+ Sbjct: 304 AICLCTTIRLKLLNINIILPIAL 326
>CCDP_MAIZE (Q01595) Cortical cell-delineating protein precursor (Root-specific| protein ZRP3) Length = 129 Score = 85.1 bits (209), Expect = 2e-16 Identities = 41/86 (47%), Positives = 55/86 (63%) Frame = -2 Query: 375 GKCPIDTLXLLGCVDALDGLLHALIGSNASDKCCPLLSGVADLXAALCLCTTIKLKALNI 196 G+CPID L L C L GL+ +G ++CCPLL G+ DL AALCLCT IK L I Sbjct: 46 GRCPIDALKLKVCAKVL-GLVK--VGLPQYEQCCPLLEGLVDLDAALCLCTAIKANVLGI 102 Query: 195 NLVLPXAIEVLVNQCGKTVPDDFTVP 118 +L +P ++ ++N CG+ P+DFT P Sbjct: 103 HLNVPLSLNFILNNCGRICPEDFTCP 128
>14KD_DAUCA (P14009) 14 kDa proline-rich protein DC2.15 precursor| Length = 137 Score = 82.0 bits (201), Expect = 2e-15 Identities = 40/83 (48%), Positives = 53/83 (63%) Frame = -2 Query: 375 GKCPIDTLXLLGCVDALDGLLHALIGSNASDKCCPLLSGVADLXAALCLCTTIKLKALNI 196 GKCP D L L C D L+ + + +IGS + CC LL G+ +L AA+CLCT IK L Sbjct: 52 GKCPRDALKLGVCADVLNLVHNVVIGSPPTLPCCSLLEGLVNLEAAVCLCTAIKANILGK 111 Query: 195 NLVLPXAIEVLVNQCGKTVPDDF 127 NL LP A+ +++N CGK VP+ F Sbjct: 112 NLNLPIALSLVLNNCGKQVPNGF 134
>HPSE_SOYBN (P24337) Hydrophobic seed protein (HPS) (Allergen Gly m 1)| Length = 80 Score = 49.7 bits (117), Expect = 8e-06 Identities = 27/74 (36%), Positives = 44/74 (59%) Frame = -2 Query: 339 CVDALDGLLHALIGSNASDKCCPLLSGVADLXAALCLCTTIKLKALNINLVLPXAIEVLV 160 C++ L G L + D CC L+ G+ D+ A +CLC I+L+AL I L L +++++ Sbjct: 14 CLNILGGSLGTV------DDCCALIGGLGDIEAIVCLC--IQLRALGI-LNLNRNLQLIL 64 Query: 159 NQCGKTVPDDFTVP 118 N CG++ P + T P Sbjct: 65 NSCGRSYPSNATCP 78 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 65,879,028 Number of Sequences: 219361 Number of extensions: 922334 Number of successful extensions: 2130 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 2095 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2129 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6769072002 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)