Clone Name | rbasd22e05 |
---|---|
Clone Library Name | barley_pub |
>C97B2_SOYBN (O48921) Cytochrome P450 97B2 (EC 1.14.-.-)| Length = 576 Score = 32.3 bits (72), Expect = 0.82 Identities = 18/36 (50%), Positives = 20/36 (55%) Frame = +3 Query: 120 STLLTSRETNLHSRRKSGAKVFADHLSLSLPVMLSS 227 STL T + NLHSR S F H SLS P +SS Sbjct: 7 STLSTVTDANLHSRFHSRLVPFTHHFSLSQPKRISS 42
>VIT2_CHICK (P02845) Vitellogenin-2 precursor (Vitellogenin II) (Major| vitellogenin) [Contains: Lipovitellin-1 (Lipovitellin I) (LVI); Phosvitin (PV); Lipovitellin-2 (Lipovitellin II) (LVII); YGP40] Length = 1850 Score = 31.2 bits (69), Expect = 1.8 Identities = 26/99 (26%), Positives = 39/99 (39%), Gaps = 2/99 (2%) Frame = +3 Query: 54 SSAISKEHMLQKAETKNWQGNKSTLLTSRETNLHSRRKSGAKVFADHLSLSLPVMLSSAW 233 SS+ S H + + G+ S+ +SR + HS + D S S +LS W Sbjct: 1262 SSSKSSSHHSHSHHSGHLNGSSSSSSSSRSVSHHSHEHHSGHLEDDSSSSSSSSVLSKIW 1321 Query: 234 A*LRSCSMKLEHLMRQELAEA*KGGERHLSR--AQRSEH 344 + RQE + G+R SR + RS H Sbjct: 1322 GRHEIYQYRFRSAHRQEFPKRKLPGDRATSRYSSTRSSH 1360
>RHRE_PEA (Q9S8P4) Rhicadhesin receptor precursor (Germin-like protein)| Length = 217 Score = 29.6 bits (65), Expect = 5.3 Identities = 16/50 (32%), Positives = 25/50 (50%) Frame = -3 Query: 438 LLQSCATFAAFSCIMEGLNKQQAAMAHTLGGNALTFAHGKGGVLPPFTLP 289 L++ AT F ++ G N Q+ +TLG + + GG+ PP T P Sbjct: 61 LVKQGATNNTFGSLVTGANVQRIPGLNTLGVSMARIDYAPGGLNPPHTHP 110
>FA53B_HUMAN (Q14153) Protein FAM53B| Length = 422 Score = 29.3 bits (64), Expect = 7.0 Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 11/65 (16%) Frame = -3 Query: 438 LLQSCATFAAFSCIMEGLNK--QQAAMA----HTLGGNALTFAHGKGGVLP-----PFTL 292 + Q+C TF++ SC+ G Q+ A +T AL A G GG P P L Sbjct: 300 MAQNCQTFSSLSCLSAGTEDCGPQSPFARHVSNTRAWTALLSASGPGGRTPAGTPVPEPL 359 Query: 291 PPILD 277 PP D Sbjct: 360 PPSFD 364
>CDC25_YEAST (P04821) Cell division control protein 25| Length = 1589 Score = 29.3 bits (64), Expect = 7.0 Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 1/63 (1%) Frame = +3 Query: 30 TPEISGFLSSAISKEHMLQKAETKNWQGNKSTLLTSRETNLH-SRRKSGAKVFADHLSLS 206 TP+ S F S+A + M + A+ + + N + ++ + ETNL S K+G + A+ Sbjct: 214 TPQSSNFNSNASLSQDMTKSADGSS-EMNTNAIMNNNETNLQTSGEKAGPPLVAEETIKI 272 Query: 207 LPV 215 LP+ Sbjct: 273 LPL 275
>ZDHC8_MOUSE (Q5Y5T5) Probable palmitoyltransferase ZDHHC8 (EC 2.3.1.-) (Zinc| finger DHHC domain-containing protein 8) (DHHC-8) Length = 762 Score = 28.9 bits (63), Expect = 9.1 Identities = 11/29 (37%), Positives = 18/29 (62%) Frame = -3 Query: 327 HGKGGVLPPFTLPPILDASDALASCCKTL 241 HG GG+ PP+ P L+ +DA + ++L Sbjct: 403 HGPGGLRPPYPPSPPLNTTDAFSGALRSL 431
>DEAF1_MOUSE (Q9Z1T5) Deformed epidermal autoregulatory factor 1 homolog| (Nuclear DEAF-1-related transcriptional regulator) (NUDR) Length = 566 Score = 28.9 bits (63), Expect = 9.1 Identities = 11/29 (37%), Positives = 14/29 (48%) Frame = -2 Query: 397 NGGAEQAAGCNGSHPRRECSDLCARERWR 311 N G E + C G H CS C R+ W+ Sbjct: 507 NCGREAMSECTGCHKVNYCSTFCQRKDWK 535
>DEAF1_RAT (O88450) Deformed epidermal autoregulatory factor 1 homolog| (Nuclear DEAF-1-related transcriptional regulator) (NUDR) (Suppressin) Length = 565 Score = 28.9 bits (63), Expect = 9.1 Identities = 11/29 (37%), Positives = 14/29 (48%) Frame = -2 Query: 397 NGGAEQAAGCNGSHPRRECSDLCARERWR 311 N G E + C G H CS C R+ W+ Sbjct: 506 NCGREAMSECTGCHKVNYCSTFCQRKDWK 534
>DEAF1_HUMAN (O75398) Deformed epidermal autoregulatory factor 1 homolog| (Nuclear DEAF-1-related transcriptional regulator) (NUDR) (Suppressin) (Zinc finger MYND domain-containing protein 5) Length = 565 Score = 28.9 bits (63), Expect = 9.1 Identities = 11/29 (37%), Positives = 14/29 (48%) Frame = -2 Query: 397 NGGAEQAAGCNGSHPRRECSDLCARERWR 311 N G E + C G H CS C R+ W+ Sbjct: 506 NCGREAMSECTGCHKVNYCSTFCQRKDWK 534 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 76,187,048 Number of Sequences: 219361 Number of extensions: 1508204 Number of successful extensions: 4268 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 4176 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4267 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4027872870 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)