Clone Name | rbasd21o21 |
---|---|
Clone Library Name | barley_pub |
>gb|BT009457.1| Triticum aestivum clone wlp1c.pk007.f6:fis, full insert mRNA sequence Length = 1556 Score = 1116 bits (563), Expect = 0.0 Identities = 669/700 (95%), Gaps = 7/700 (1%) Strand = Plus / Minus Query: 5 tttttacaaggaactatacaaacatgtttgcaaaaacaacattttt-actagatcaatgt 63 ||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||||||| Sbjct: 1488 tttttacaaggaactatacaaacatgtttgcgaaaagaacattttttactagatcaatgt 1429 Query: 64 ggttcctacaagctggaccctcgtataaccgccgaaaa-catacagggcatg----acgg 118 |||||||||||| ||||||||||||||| | || |||| ||||||||||| | || Sbjct: 1428 ggttcctacaagttggaccctcgtataatcaccaaaaaacatacagggcacgcacgacaa 1369 Query: 119 ggcgacttatgcgacaaacagctccgcctgcccgtcgatgaagaggctcatgaactcctc 178 | ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 1368 gtcgacttatgcgacgaacagctctgcctgcccgtcgatgaagaggctcatgaactcctc 1309 Query: 179 cccgtccacggtctccttctcgatcaggaggttggcgagcctgtggaggatgtcgatgtg 238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1308 cccgtccacggtctccttctcgatcaggaggttggcgagcctgtggaggatgtcgatgtg 1249 Query: 239 ggtgttgatgatctgcgtcgcccgcgagtaggccgtctccacgagttccctgacctcggc 298 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1248 ggtgttgatgatctgcgtcgcccgcgagtaggccgtctccacgagttccctgacctcggc 1189 Query: 299 atctacgatgtccgccgtggccatcgagtagtccttctggctcgacatctgctggcccaa 358 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1188 gtctacgatgtccgccgtggccatcgagtagtccttctggctcgacatctgctggcccaa 1129 Query: 359 gaaagggtttccaccagatgacccaatcgcaacttgcccgatcttcttgctgaacccaaa 418 ||||||||||||||||||||| || ||||| |||||||| |||||||| ||||||||||| Sbjct: 1128 gaaagggtttccaccagatgatccgatcgcgacttgcccaatcttcttactgaacccaaa 1069 Query: 419 tctttcaaccatttgtctggcgacacgtgagacctgcatgaagtcgctggatgccccagt 478 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 1068 tctttcaaccatttgtctggcgacacgtgagacctgcatgaagtcactggatgccccagt 1009 Query: 479 tgtcacgttgtcttggccaaagatcacctcctcggcaaccctgccaccaagtgccacagc 538 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1008 tgtcacattgtcttggccaaagatcacctcctcggcaaccctgccaccaagtgccacagc 949 Query: 539 catttggttctctaggtagctcctgctgtacagtccagactcgagcctctcttcgcttgg 598 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 948 catttggttctctaggtagctcctgctgtacagtccagactcaagcctctcttcgcttgg 889 Query: 599 agcaaaagaacgtgagaccaccagcctgacctcgaggaatgatggaaatcttggcaacag 658 ||| |||||||||||| |||||||| |||||||||||||||||||||||||||||||||| Sbjct: 888 agc-aaagaacgtgagcccaccagcttgacctcgaggaatgatggaaatcttggcaacag 830 Query: 659 ggtcatattcaggcatcaaggcaccgacgagggcatgtcc 698 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 829 ggtcatattcaggcatcagggcaccgacgagggcatgtcc 790
>gb|BT009148.1| Triticum aestivum clone wl1n.pk0059.g7:fis, full insert mRNA sequence Length = 890 Score = 1072 bits (541), Expect = 0.0 Identities = 660/696 (94%), Gaps = 9/696 (1%) Strand = Plus / Minus Query: 5 tttttacaaggaa-ctatacaaacatgtttgcaaaaacaacatttttactagatcaatgt 63 ||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||| Sbjct: 814 tttttacaaggaaactatacaaacatgtttgcgaaaagaacatttttactagatcaatgt 755 Query: 64 ggttcctacaagctggaccctcgtataaccgccgaaaa-catacagggcatgacggggcg 122 |||||||||||| ||||||||||| ||| | ||||||| |||||||| || | | Sbjct: 754 ggttcctacaagttggaccctcgtgtaatcaccgaaaaacatacagg------cgagttg 701 Query: 123 acttatgcgacaaacagctccgcctgcccgtcgatgaagaggctcatgaactcctccccg 182 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 700 acttatgcgacgaacagctctgcctgcccgtcgatgaagaggctcatgaactcctccccg 641 Query: 183 tccacggtctccttctcgatcaggaggttggcgagcctgtggaggatgtcgatgtgggtg 242 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 640 tccacggtctccttctcgatgaggaggttggcgagcctgtggaggatgtcgatgtgggtg 581 Query: 243 ttgatgatctgcgtcgcccgcgagtaggccgtctccacgagttccctgacctcggcatct 302 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 580 ttgatgatctgcgtcgcgcgcgagtaggccgtctccacgagttccctgacctcggcgtct 521 Query: 303 acgatgtccgccgtggccatcgagtagtccttctggctcgacatctgctggcccaagaaa 362 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 520 acgatgtccgccgtggccatcgagtagtccttctggctcgacatctgctggcccaagaaa 461 Query: 363 gggtttccaccagatgacccaatcgcaacttgcccgatcttcttgctgaacccaaatctt 422 |||||||||||||||||||| || || |||||||| |||||||||||||||||||| ||| Sbjct: 460 gggtttccaccagatgacccgatggcgacttgcccaatcttcttgctgaacccaaacctt 401 Query: 423 tcaaccatttgtctggcgacacgtgagacctgcatgaagtcgctggatgccccagttgtc 482 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 400 tcaaccatttgtctggcgacacgtgagacctgcatgaagtcgctggatgccccggttgtc 341 Query: 483 acgttgtcttggccaaagatcacctcctcggcaaccctgccaccaagtgccacagccatt 542 || |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 340 acattgtcttgcccaaagatcacctcctcggcaaccctgccaccaagtgccacagccatt 281 Query: 543 tggttctctaggtagctcctgctgtacagtccagactcgagcctctcttcgcttggagca 602 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 280 tggttctctaggtagctcctgctgtacagcccagactcgagcctctcttcgcttggagc- 222 Query: 603 aaagaacgtgagaccaccagcctgacctcgaggaatgatggaaatcttggcaacagggtc 662 |||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 221 aaagaacgtgagcccaccagcttgaccacgaggaatgatggaaatcttggcaacagggtc 162 Query: 663 atattcaggcatcaaggcaccgacgagggcatgtcc 698 |||||||||||||| ||||||||||||||||||||| Sbjct: 161 atattcaggcatcagggcaccgacgagggcatgtcc 126
>gb|BT009112.1| Triticum aestivum clone wl1.pk0008.c2:fis, full insert mRNA sequence Length = 654 Score = 944 bits (476), Expect = 0.0 Identities = 556/582 (95%), Gaps = 3/582 (0%) Strand = Plus / Minus Query: 3 catttttacaaggaactatacaaacatgtttgcaaaaacaacatttttactagatcaatg 62 ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 582 catttttacaaggaactatacaaacatgtttgcggaaagaacatttttactagatcaatg 523 Query: 63 tggttcctacaagctggaccctcgtataaccgccgaaaacatacagggcatgacggggcg 122 |||||||||||| ||||||||||||||| | | ||||||||||| |||| ||| | || Sbjct: 522 tggttcctacaacttggaccctcgtataatcacggaaaacatacaaggcacgacaagtcg 463 Query: 123 acttatgcgacaaacagctccgcctgcccgtcgatgaagaggctcatgaactcctccccg 182 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 462 acttatgcgacgaacagctctgcctgcccgtcgatgaagaggctcatgaactcctccccg 403 Query: 183 tccacggtctccttctcgatcaggaggttggcgagcctgtggaggatgtcgatgtgggtg 242 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 402 tccacggtctccttctcgatcaggaggttggcgagcctgtggaggatatcgatgtgggtg 343 Query: 243 ttgatgatctgcgtcgcccgcgagtaggccgtctccacgagttccctgacctcggcatct 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 342 ttgatgatctgcgtcgcccgcgagtaggccgtctccacgagttccctgacctcggcatct 283 Query: 303 acgatgtccgccgtggccatcgagtagtccttctggctcgacatctgctggcccaagaaa 362 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 282 acgatgtccgccgtggccatcgagtagtccttctggctcgacatctgctggcccaagaaa 223 Query: 363 gggttt---ccaccagatgacccaatcgcaacttgcccgatcttcttgctgaacccaaat 419 |||||| |||||||||||||| || || |||||||| ||||||||||||||||||||| Sbjct: 222 gggtttccaccaccagatgacccgattgcgacttgcccaatcttcttgctgaacccaaat 163 Query: 420 ctttcaaccatttgtctggcgacacgtgagacctgcatgaagtcgctggatgccccagtt 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 162 ctttcaaccatttgtctggcgacacgtgagacctgcatgaagtcgctggatgccccagtt 103 Query: 480 gtcacgttgtcttggccaaagatcacctcctcggcaaccctgccaccaagtgccacagcc 539 ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 102 gtcacattgtcttggccaaagataacctcctcggcaaccctgccaccaagtgccacagcc 43 Query: 540 atttggttctctaggtagctcctgctgtacagtccagactcg 581 ||||||||||||||||||||||||||||| |||||||||||| Sbjct: 42 atttggttctctaggtagctcctgctgtatagtccagactcg 1
>dbj|AK065019.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001F19, full insert sequence Length = 2378 Score = 624 bits (315), Expect = e-176 Identities = 505/567 (89%), Gaps = 1/567 (0%) Strand = Plus / Minus Query: 129 gcgacaaacagctccgcctgcccgtcgatgaagaggctcatgaactcctccccgtccacg 188 |||||||||| ||| ||||| ||||||||||| |||||||||||||| ||||||||||| Sbjct: 2093 gcgacaaacaactctgcctgaccgtcgatgaacaggctcatgaactcttccccgtccacc 2034 Query: 189 gtctccttctcgatcaggaggttggcgagcctgtggaggatgtcgatgtgggtgttgatg 248 ||||||||||| ||||| || | || ||| ||||||||||||||||||| || ||||| Sbjct: 2033 gtctccttctccatcagaagctgagcaagcttgtggaggatgtcgatgtgtgtcgtgatg 1974 Query: 249 atctgcgtcgcccgcgagtaggccgtctccacgagttccctgacctcggcatctacgatg 308 |||||||| || | ||||||||| |||||||||| ||||| ||||| ||||| || | Sbjct: 1973 atctgcgttgctcttgagtaggccttctccacgagctccctcacctcagcatccacaaca 1914 Query: 309 tccgccgtggccatcgagtagtccttctggctcgacatctgctggcccaagaaagggttt 368 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1913 tccgcggtggccatcgagtagtccttctggctcgacatctgctggcccaagaaaggattt 1854 Query: 369 ccaccagatgacccaatcgcaacttgcccgatcttcttgctgaacccaaatctttcaacc 428 ||||||| | |||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1853 ccaccaggtccaccaatcgcaacttgcccgatcttcttgctgaatccaaatctttcaacc 1794 Query: 429 atttgtctggcgacacgtgagacctgcatgaagtcgctggatgccccagttgtcacgttg 488 |||||||| || |||||||| |||||||| || ||| |||| |||||||||||||| || Sbjct: 1793 atttgtcttgcaacacgtgaaacctgcataaaatcgttggaggccccagttgtcacattt 1734 Query: 489 tcttggccaaagatcacctcctcggcaaccctgccaccaagtgccacagccatttggttc 548 |||||||||||||||||||| ||||||||||| |||||||| || || |||||||||||| Sbjct: 1733 tcttggccaaagatcacctcttcggcaacccttccaccaagagctacggccatttggttc 1674 Query: 549 tctaggtagctcctgctgtacagtccagactcgagcctctcttcgcttggagcaaaagaa 608 |||||||||||||||||||||| ||||||||| |||||||| ||||||||||| |||||| Sbjct: 1673 tctaggtagctcctgctgtacaatccagactcaagcctctcctcgcttggagc-aaagaa 1615 Query: 609 cgtgagaccaccagcctgacctcgaggaatgatggaaatcttggcaacagggtcatattc 668 ||||| |||||||| ||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 1614 tgtgagtccaccagcttgaccacgaggaatgatggaaatcttagcaacagggtcatattc 1555 Query: 669 aggcatcaaggcaccgacgagggcatg 695 |||||| | |||||| || |||||||| Sbjct: 1554 aggcatgagggcaccaacaagggcatg 1528
>dbj|AK061771.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-C10, full insert sequence Length = 1325 Score = 624 bits (315), Expect = e-176 Identities = 505/567 (89%), Gaps = 1/567 (0%) Strand = Plus / Minus Query: 129 gcgacaaacagctccgcctgcccgtcgatgaagaggctcatgaactcctccccgtccacg 188 |||||||||| ||| ||||| ||||||||||| |||||||||||||| ||||||||||| Sbjct: 1149 gcgacaaacaactctgcctgaccgtcgatgaacaggctcatgaactcttccccgtccacc 1090 Query: 189 gtctccttctcgatcaggaggttggcgagcctgtggaggatgtcgatgtgggtgttgatg 248 ||||||||||| ||||| || | || ||| ||||||||||||||||||| || ||||| Sbjct: 1089 gtctccttctccatcagaagctgagcaagcttgtggaggatgtcgatgtgtgtcgtgatg 1030 Query: 249 atctgcgtcgcccgcgagtaggccgtctccacgagttccctgacctcggcatctacgatg 308 |||||||| || | ||||||||| |||||||||| ||||| ||||| ||||| || | Sbjct: 1029 atctgcgttgctcttgagtaggccttctccacgagctccctcacctcagcatccacaaca 970 Query: 309 tccgccgtggccatcgagtagtccttctggctcgacatctgctggcccaagaaagggttt 368 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 969 tccgcggtggccatcgagtagtccttctggctcgacatctgctggcccaagaaaggattt 910 Query: 369 ccaccagatgacccaatcgcaacttgcccgatcttcttgctgaacccaaatctttcaacc 428 ||||||| | |||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 909 ccaccaggtccaccaatcgcaacttgcccgatcttcttgctgaatccaaatctttcaacc 850 Query: 429 atttgtctggcgacacgtgagacctgcatgaagtcgctggatgccccagttgtcacgttg 488 |||||||| || |||||||| |||||||| || ||| |||| |||||||||||||| || Sbjct: 849 atttgtcttgcaacacgtgaaacctgcataaaatcgttggaggccccagttgtcacattt 790 Query: 489 tcttggccaaagatcacctcctcggcaaccctgccaccaagtgccacagccatttggttc 548 |||||||||||||||||||| ||||||||||| |||||||| || || |||||||||||| Sbjct: 789 tcttggccaaagatcacctcttcggcaacccttccaccaagagctacggccatttggttc 730 Query: 549 tctaggtagctcctgctgtacagtccagactcgagcctctcttcgcttggagcaaaagaa 608 |||||||||||||||||||||| ||||||||| |||||||| ||||||||||| |||||| Sbjct: 729 tctaggtagctcctgctgtacaatccagactcaagcctctcctcgcttggagc-aaagaa 671 Query: 609 cgtgagaccaccagcctgacctcgaggaatgatggaaatcttggcaacagggtcatattc 668 ||||| |||||||| ||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 670 tgtgagtccaccagcttgaccacgaggaatgatggaaatcttagcaacagggtcatattc 611 Query: 669 aggcatcaaggcaccgacgagggcatg 695 |||||| | |||||| || |||||||| Sbjct: 610 aggcatgagggcaccaacaagggcatg 584
>gb|AY103957.1| Zea mays PCO116832 mRNA sequence Length = 1820 Score = 553 bits (279), Expect = e-154 Identities = 496/567 (87%), Gaps = 1/567 (0%) Strand = Plus / Minus Query: 129 gcgacaaacagctccgcctgcccgtcgatgaagaggctcatgaactcctccccgtccacg 188 |||||||||||||| ||||| ||||| ||||| | ||||||||||||||||||||||||| Sbjct: 1445 gcgacaaacagctcggcctggccgtcaatgaacaagctcatgaactcctccccgtccacg 1386 Query: 189 gtctccttctcgatcaggaggttggcgagcctgtggaggatgtcgatgtgggtgttgatg 248 |||||||||||||||||||| | ||||||| ||||||||||||||||||| ||| |||| Sbjct: 1385 gtctccttctcgatcaggagctgggcgagcttgtggaggatgtcgatgtgcgtggtgatt 1326 Query: 249 atctgcgtcgcccgcgagtaggccgtctccacgagttccctgacctcggcatctacgatg 308 |||||| | || | ||||||||| |||||||||||||||| |||||||| || || | Sbjct: 1325 atctgccttgctctagagtaggccttctccacgagttccctcacctcggcgtccacaaca 1266 Query: 309 tccgccgtggccatcgagtagtccttctggctcgacatctgctggcccaagaaagggttt 368 ||||| || ||||| ||||||||||||||||| |||||||| || ||||||||||||||| Sbjct: 1265 tccgctgttgccatagagtagtccttctggcttgacatctgttgccccaagaaagggttt 1206 Query: 369 ccaccagatgacccaatcgcaacttgcccgatcttcttgctgaacccaaatctttcaacc 428 ||||| | | ||| ||||||||||| ||||||||||| ||||| ||||||||||| ||| Sbjct: 1205 ccacccggtcccccgatcgcaacttggccgatcttcttactgaatccaaatctttcgacc 1146 Query: 429 atttgtctggcgacacgtgagacctgcatgaagtcgctggatgccccagttgtcacgttg 488 || || || ||||||||||| || |||||||||||| |||| || || |||||||||||| Sbjct: 1145 atctgccttgcgacacgtgacacttgcatgaagtcgttggaagctcctgttgtcacgttg 1086 Query: 489 tcttggccaaagatcacctcctcggcaaccctgccaccaagtgccacagccatttggttc 548 ||||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||| Sbjct: 1085 tcttggccaaagatcacctcctcagcaaccctgccaccaagggctacagccatttggttc 1026 Query: 549 tctaggtagctcctgctgtacagtccagactcgagcctctcttcgcttggagcaaaagaa 608 || || |||||||||||||||| |||||| || ||||| |||||||||||||| |||||| Sbjct: 1025 tcaagatagctcctgctgtacaatccagattctagcctttcttcgcttggagc-aaagaa 967 Query: 609 cgtgagaccaccagcctgacctcgaggaatgatggaaatcttggcaacagggtcatattc 668 ||||| ||||||||||| || ||||| ||||||||||||||||| || || ||||| || Sbjct: 966 tgtgagtccaccagcctggccacgagggatgatggaaatcttggctactggatcatactc 907 Query: 669 aggcatcaaggcaccgacgagggcatg 695 ||||| | ||| ||||| |||||||| Sbjct: 906 tggcatgagggcgccgacaagggcatg 880 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 atgtggttcctacaagctgg 79 |||||||||||||||||||| Sbjct: 1545 atgtggttcctacaagctgg 1526
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 222 bits (112), Expect = 1e-54 Identities = 160/176 (90%) Strand = Plus / Plus Query: 347 ctgctggcccaagaaagggtttccaccagatgacccaatcgcaacttgcccgatcttctt 406 |||||||||||||||||| |||||||||| | |||||||||||||||||||||||||| Sbjct: 30359326 ctgctggcccaagaaaggatttccaccaggtccaccaatcgcaacttgcccgatcttctt 30359385 Query: 407 gctgaacccaaatctttcaaccatttgtctggcgacacgtgagacctgcatgaagtcgct 466 |||||| ||||||||||||||||||||||| || |||||||| |||||||| || ||| | Sbjct: 30359386 gctgaatccaaatctttcaaccatttgtcttgcaacacgtgaaacctgcataaaatcgtt 30359445 Query: 467 ggatgccccagttgtcacgttgtcttggccaaagatcacctcctcggcaaccctgc 522 ||| |||||||||||||| || |||||||||||||||||||| ||||||||||||| Sbjct: 30359446 ggaggccccagttgtcacattttcttggccaaagatcacctcttcggcaaccctgc 30359501 Score = 210 bits (106), Expect = 5e-51 Identities = 158/174 (90%), Gaps = 1/174 (0%) Strand = Plus / Plus Query: 522 ccaccaagtgccacagccatttggttctctaggtagctcctgctgtacagtccagactcg 581 |||||||| || || |||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 30359590 ccaccaagagctacggccatttggttctctaggtagctcctgctgtacaatccagactca 30359649 Query: 582 agcctctcttcgcttggagcaaaagaacgtgagaccaccagcctgacctcgaggaatgat 641 |||||||| ||||||||||| |||||| ||||| |||||||| ||||| ||||||||||| Sbjct: 30359650 agcctctcctcgcttggagc-aaagaatgtgagtccaccagcttgaccacgaggaatgat 30359708 Query: 642 ggaaatcttggcaacagggtcatattcaggcatcaaggcaccgacgagggcatg 695 ||||||||| ||||||||||||||||||||||| | |||||| || |||||||| Sbjct: 30359709 ggaaatcttagcaacagggtcatattcaggcatgagggcaccaacaagggcatg 30359762 Score = 210 bits (106), Expect = 5e-51 Identities = 193/222 (86%) Strand = Plus / Plus Query: 129 gcgacaaacagctccgcctgcccgtcgatgaagaggctcatgaactcctccccgtccacg 188 |||||||||| ||| ||||| ||||||||||| |||||||||||||| ||||||||||| Sbjct: 30354728 gcgacaaacaactctgcctgaccgtcgatgaacaggctcatgaactcttccccgtccacc 30354787 Query: 189 gtctccttctcgatcaggaggttggcgagcctgtggaggatgtcgatgtgggtgttgatg 248 ||||||||||| ||||| || | || ||| ||||||||||||||||||| || ||||| Sbjct: 30354788 gtctccttctccatcagaagctgagcaagcttgtggaggatgtcgatgtgtgtcgtgatg 30354847 Query: 249 atctgcgtcgcccgcgagtaggccgtctccacgagttccctgacctcggcatctacgatg 308 |||||||| || | ||||||||| |||||||||| ||||| ||||| ||||| || | Sbjct: 30354848 atctgcgttgctcttgagtaggccttctccacgagctccctcacctcagcatccacaaca 30354907 Query: 309 tccgccgtggccatcgagtagtccttctggctcgacatctgc 350 ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 30354908 tccgcggtggccatcgagtagtccttctggctcgacatctgc 30354949 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 catgtttgcaaaaacaacat 46 |||||||||||||||||||| Sbjct: 15678432 catgtttgcaaaaacaacat 15678451
>dbj|AP003685.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0548E04 Length = 138037 Score = 222 bits (112), Expect = 1e-54 Identities = 160/176 (90%) Strand = Plus / Plus Query: 347 ctgctggcccaagaaagggtttccaccagatgacccaatcgcaacttgcccgatcttctt 406 |||||||||||||||||| |||||||||| | |||||||||||||||||||||||||| Sbjct: 105921 ctgctggcccaagaaaggatttccaccaggtccaccaatcgcaacttgcccgatcttctt 105980 Query: 407 gctgaacccaaatctttcaaccatttgtctggcgacacgtgagacctgcatgaagtcgct 466 |||||| ||||||||||||||||||||||| || |||||||| |||||||| || ||| | Sbjct: 105981 gctgaatccaaatctttcaaccatttgtcttgcaacacgtgaaacctgcataaaatcgtt 106040 Query: 467 ggatgccccagttgtcacgttgtcttggccaaagatcacctcctcggcaaccctgc 522 ||| |||||||||||||| || |||||||||||||||||||| ||||||||||||| Sbjct: 106041 ggaggccccagttgtcacattttcttggccaaagatcacctcttcggcaaccctgc 106096 Score = 210 bits (106), Expect = 5e-51 Identities = 158/174 (90%), Gaps = 1/174 (0%) Strand = Plus / Plus Query: 522 ccaccaagtgccacagccatttggttctctaggtagctcctgctgtacagtccagactcg 581 |||||||| || || |||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 106185 ccaccaagagctacggccatttggttctctaggtagctcctgctgtacaatccagactca 106244 Query: 582 agcctctcttcgcttggagcaaaagaacgtgagaccaccagcctgacctcgaggaatgat 641 |||||||| ||||||||||| |||||| ||||| |||||||| ||||| ||||||||||| Sbjct: 106245 agcctctcctcgcttggagc-aaagaatgtgagtccaccagcttgaccacgaggaatgat 106303 Query: 642 ggaaatcttggcaacagggtcatattcaggcatcaaggcaccgacgagggcatg 695 ||||||||| ||||||||||||||||||||||| | |||||| || |||||||| Sbjct: 106304 ggaaatcttagcaacagggtcatattcaggcatgagggcaccaacaagggcatg 106357 Score = 210 bits (106), Expect = 5e-51 Identities = 193/222 (86%) Strand = Plus / Plus Query: 129 gcgacaaacagctccgcctgcccgtcgatgaagaggctcatgaactcctccccgtccacg 188 |||||||||| ||| ||||| ||||||||||| |||||||||||||| ||||||||||| Sbjct: 101323 gcgacaaacaactctgcctgaccgtcgatgaacaggctcatgaactcttccccgtccacc 101382 Query: 189 gtctccttctcgatcaggaggttggcgagcctgtggaggatgtcgatgtgggtgttgatg 248 ||||||||||| ||||| || | || ||| ||||||||||||||||||| || ||||| Sbjct: 101383 gtctccttctccatcagaagctgagcaagcttgtggaggatgtcgatgtgtgtcgtgatg 101442 Query: 249 atctgcgtcgcccgcgagtaggccgtctccacgagttccctgacctcggcatctacgatg 308 |||||||| || | ||||||||| |||||||||| ||||| ||||| ||||| || | Sbjct: 101443 atctgcgttgctcttgagtaggccttctccacgagctccctcacctcagcatccacaaca 101502 Query: 309 tccgccgtggccatcgagtagtccttctggctcgacatctgc 350 ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 101503 tccgcggtggccatcgagtagtccttctggctcgacatctgc 101544
>dbj|AB017480.2| Nicotiana tabacum mRNA for chloroplast FtsH protease, complete cds Length = 2447 Score = 216 bits (109), Expect = 7e-53 Identities = 296/357 (82%), Gaps = 1/357 (0%) Strand = Plus / Minus Query: 318 gccatcgagtagtccttctggctcgacatctgctggcccaagaaagggtttccaccagat 377 ||||| |||||||| |||||| | |||||||| || || | |||||| ||||| ||| | Sbjct: 1952 gccatggagtagtctttctgggttgacatctgttgacctaggaaaggatttcctccacct 1893 Query: 378 gacccaatcgcaacttgcccgatcttcttgctgaacccaaatctttcaaccatttgtctg 437 ||||| |||||||| || ||||| ||||||||||| ||||| |||||||| || || Sbjct: 1892 cctccaatggcaacttgtccaatctttttgctgaaccctaatctctcaaccatctgcctt 1833 Query: 438 gcgacacgtgagacctgcatgaagtcgctggatgccccagttgtcacgttgtcttggcca 497 || || ||||| || |||||||| ||| | |||||||||||||| ||||| ||||| ||| Sbjct: 1832 gccactcgtgaaacttgcatgaaatcgttagatgccccagttgttacgttatcttgtcca 1773 Query: 498 aagatcacctcctcggcaaccctgccaccaagtgccacagccatttggttctctaggtag 557 || || |||||||| |||||||| |||||||||| || |||||||| |||||||||||| Sbjct: 1772 aaaataacctcctcagcaaccctttcaccaagtgcaactgccatttgattctctaggtag 1713 Query: 558 ctcctgctgtacagtccagactcgagcctctcttcgcttggagcaaaagaacgtgagacc 617 ||||||||||||| || ||||| || || |||||||| || || |||||| || ||||| Sbjct: 1712 ctcctgctgtacaagcccgactcaagtctttcttcgctgggggc-aaagaaggtaagacc 1654 Query: 618 accagcctgacctcgaggaatgatggaaatcttggcaacagggtcatattcaggcat 674 |||||| || ||||||||||| || || |||||||||||||| ||||| || ||||| Sbjct: 1653 accagcttggcctcgaggaattatagatatcttggcaacaggatcatactcgggcat 1597
>ref|NM_103909.3| Arabidopsis thaliana FTSH1; ATP-dependent peptidase/ ATPase/ metallopeptidase AT1G50250 (FTSH1) mRNA, complete cds Length = 2473 Score = 214 bits (108), Expect = 3e-52 Identities = 244/288 (84%), Gaps = 1/288 (0%) Strand = Plus / Minus Query: 387 gcaacttgcccgatcttcttgctgaacccaaatctttcaaccatttgtctggcgacacgt 446 |||||||| || ||||| ||||||||||||||||| |||| |||||| | || ||||| Sbjct: 2022 gcaacttgtccaatctttttgctgaacccaaatctctcaatcatttgacgtgccacacga 1963 Query: 447 gagacctgcatgaagtcgctggatgccccagttgtcacgttgtcttggccaaagatcacc 506 || ||||||||||| || | ||||| ||||| ||||| || || | |||||||||||| Sbjct: 1962 gacacctgcatgaaatcatttgatgctccagtcgtcacattctcatccccaaagatcacc 1903 Query: 507 tcctcggcaaccctgccaccaagtgccacagccatttggttctctaggtagctcctgctg 566 ||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| ||| Sbjct: 1902 tcctctgcaacccttccgccaagtgcaacagccatttgattctcaaggtagctcctactg 1843 Query: 567 tacagtccagactcgagcctctcttcgcttggagcaaaagaacgtgagaccaccagcctg 626 |||| ||||||||| || || |||||||||||||||||| || ||||| |||||||| || Sbjct: 1842 tacaatccagactcaagtctttcttcgcttggagcaaaa-aaagtgagcccaccagcttg 1784 Query: 627 acctcgaggaatgatggaaatcttggcaacagggtcatattcaggcat 674 || ||||||||||| |||||||| ||||| || |||||||| ||||| Sbjct: 1783 gccacgaggaatgatagaaatctttgcaaccggatcatattctggcat 1736 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Minus Query: 150 ccgtcgatgaagaggctcatgaactcctccccgtccacggtctccttctcgatcaggag 208 ||||| || ||||| ||||||||||| || ||||| || || || |||||||||||||| Sbjct: 2259 ccgtcaataaagagactcatgaactcttcaccgtcaacagtttctttctcgatcaggag 2201
>emb|X99808.1|ATFTSH A.thaliana mRNA for chloroplast FtsH protease Length = 2447 Score = 214 bits (108), Expect = 3e-52 Identities = 244/288 (84%), Gaps = 1/288 (0%) Strand = Plus / Minus Query: 387 gcaacttgcccgatcttcttgctgaacccaaatctttcaaccatttgtctggcgacacgt 446 |||||||| || ||||| ||||||||||||||||| |||| |||||| | || ||||| Sbjct: 2020 gcaacttgtccaatctttttgctgaacccaaatctctcaatcatttgacgtgccacacga 1961 Query: 447 gagacctgcatgaagtcgctggatgccccagttgtcacgttgtcttggccaaagatcacc 506 || ||||||||||| || | ||||| ||||| ||||| || || | |||||||||||| Sbjct: 1960 gacacctgcatgaaatcatttgatgctccagtcgtcacattctcatccccaaagatcacc 1901 Query: 507 tcctcggcaaccctgccaccaagtgccacagccatttggttctctaggtagctcctgctg 566 ||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| ||| Sbjct: 1900 tcctctgcaacccttccgccaagtgcaacagccatttgattctcaaggtagctcctactg 1841 Query: 567 tacagtccagactcgagcctctcttcgcttggagcaaaagaacgtgagaccaccagcctg 626 |||| ||||||||| || || |||||||||||||||||| || ||||| |||||||| || Sbjct: 1840 tacaatccagactcaagtctttcttcgcttggagcaaaa-aaagtgagcccaccagcttg 1782 Query: 627 acctcgaggaatgatggaaatcttggcaacagggtcatattcaggcat 674 || ||||||||||| |||||||| ||||| || |||||||| ||||| Sbjct: 1781 gccacgaggaatgatagaaatctttgcaaccggatcatattctggcat 1734 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Minus Query: 150 ccgtcgatgaagaggctcatgaactcctccccgtccacggtctccttctcgatcaggag 208 ||||| || ||||| ||||||||||| || ||||| || || || |||||||||||||| Sbjct: 2257 ccgtcaataaagagactcatgaactcttcaccgtcaacagtttctttctcgatcaggag 2199
>gb|AY123034.1| Arabidopsis thaliana putative chloroplast FtsH protease (At1g50250) mRNA, complete cds Length = 2182 Score = 214 bits (108), Expect = 3e-52 Identities = 244/288 (84%), Gaps = 1/288 (0%) Strand = Plus / Minus Query: 387 gcaacttgcccgatcttcttgctgaacccaaatctttcaaccatttgtctggcgacacgt 446 |||||||| || ||||| ||||||||||||||||| |||| |||||| | || ||||| Sbjct: 1889 gcaacttgtccaatctttttgctgaacccaaatctctcaatcatttgacgtgccacacga 1830 Query: 447 gagacctgcatgaagtcgctggatgccccagttgtcacgttgtcttggccaaagatcacc 506 || ||||||||||| || | ||||| ||||| ||||| || || | |||||||||||| Sbjct: 1829 gacacctgcatgaaatcatttgatgctccagtcgtcacattctcatccccaaagatcacc 1770 Query: 507 tcctcggcaaccctgccaccaagtgccacagccatttggttctctaggtagctcctgctg 566 ||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| ||| Sbjct: 1769 tcctctgcaacccttccgccaagtgcaacagccatttgattctcaaggtagctcctactg 1710 Query: 567 tacagtccagactcgagcctctcttcgcttggagcaaaagaacgtgagaccaccagcctg 626 |||| ||||||||| || || |||||||||||||||||| || ||||| |||||||| || Sbjct: 1709 tacaatccagactcaagtctttcttcgcttggagcaaaa-aaagtgagcccaccagcttg 1651 Query: 627 acctcgaggaatgatggaaatcttggcaacagggtcatattcaggcat 674 || ||||||||||| |||||||| ||||| || |||||||| ||||| Sbjct: 1650 gccacgaggaatgatagaaatctttgcaaccggatcatattctggcat 1603 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Minus Query: 150 ccgtcgatgaagaggctcatgaactcctccccgtccacggtctccttctcgatcaggag 208 ||||| || ||||| ||||||||||| || ||||| || || || |||||||||||||| Sbjct: 2126 ccgtcaataaagagactcatgaactcttcaccgtcaacagtttctttctcgatcaggag 2068
>gb|AY091095.1| Arabidopsis thaliana putative chloroplast FtsH protease (At1g50250) mRNA, complete cds Length = 2452 Score = 214 bits (108), Expect = 3e-52 Identities = 244/288 (84%), Gaps = 1/288 (0%) Strand = Plus / Minus Query: 387 gcaacttgcccgatcttcttgctgaacccaaatctttcaaccatttgtctggcgacacgt 446 |||||||| || ||||| ||||||||||||||||| |||| |||||| | || ||||| Sbjct: 1985 gcaacttgtccaatctttttgctgaacccaaatctctcaatcatttgacgtgccacacga 1926 Query: 447 gagacctgcatgaagtcgctggatgccccagttgtcacgttgtcttggccaaagatcacc 506 || ||||||||||| || | ||||| ||||| ||||| || || | |||||||||||| Sbjct: 1925 gacacctgcatgaaatcatttgatgctccagtcgtcacattctcatccccaaagatcacc 1866 Query: 507 tcctcggcaaccctgccaccaagtgccacagccatttggttctctaggtagctcctgctg 566 ||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| ||| Sbjct: 1865 tcctctgcaacccttccgccaagtgcaacagccatttgattctcaaggtagctcctactg 1806 Query: 567 tacagtccagactcgagcctctcttcgcttggagcaaaagaacgtgagaccaccagcctg 626 |||| ||||||||| || || |||||||||||||||||| || ||||| |||||||| || Sbjct: 1805 tacaatccagactcaagtctttcttcgcttggagcaaaa-aaagtgagcccaccagcttg 1747 Query: 627 acctcgaggaatgatggaaatcttggcaacagggtcatattcaggcat 674 || ||||||||||| |||||||| ||||| || |||||||| ||||| Sbjct: 1746 gccacgaggaatgatagaaatctttgcaaccggatcatattctggcat 1699 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Minus Query: 150 ccgtcgatgaagaggctcatgaactcctccccgtccacggtctccttctcgatcaggag 208 ||||| || ||||| ||||||||||| || ||||| || || || |||||||||||||| Sbjct: 2222 ccgtcaataaagagactcatgaactcttcaccgtcaacagtttctttctcgatcaggag 2164
>emb|X90472.1|CAATPASE C.annuum mRNA for ATPase protein Length = 1989 Score = 208 bits (105), Expect = 2e-50 Identities = 295/357 (82%), Gaps = 1/357 (0%) Strand = Plus / Minus Query: 318 gccatcgagtagtccttctggctcgacatctgctggcccaagaaagggtttccaccagat 377 ||||| ||||||||||||||| | |||||||| ||||| | |||||||||||| ||| | Sbjct: 1864 gccatggagtagtccttctgggttgacatctgttggcctaggaaagggtttcctccacct 1805 Query: 378 gacccaatcgcaacttgcccgatcttcttgctgaacccaaatctttcaaccatttgtctg 437 || || |||||||| || ||||| |||||||| || ||||| |||||||| || || Sbjct: 1804 cctccgatggcaacttggcctatctttttgctgaaacctaatctctcaaccatctgcctc 1745 Query: 438 gcgacacgtgagacctgcatgaagtcgctggatgccccagttgtcacgttgtcttggcca 497 || || ||||| || |||||||| || | ||||| ||||| || |||||||||| ||| Sbjct: 1744 gccactcgtgaaacttgcatgaaatcattagatgcgccagtggttacgttgtcttctcca 1685 Query: 498 aagatcacctcctcggcaaccctgccaccaagtgccacagccatttggttctctaggtag 557 || || |||||||| |||||||| ||||||||||| || |||||||| |||||||||||| Sbjct: 1684 aaaataacctcctcagcaacccttccaccaagtgcaactgccatttgattctctaggtag 1625 Query: 558 ctcctgctgtacagtccagactcgagcctctcttcgcttggagcaaaagaacgtgagacc 617 |||||||||||||| || ||||| || || |||||||| || || |||||| |||||||| Sbjct: 1624 ctcctgctgtacaggcctgactcaagtctttcttcgctgggggc-aaagaaggtgagacc 1566 Query: 618 accagcctgacctcgaggaatgatggaaatcttggcaacagggtcatattcaggcat 674 ||| || || || |||||||| || || |||||||||||||| ||||| || ||||| Sbjct: 1565 accggcttggccacgaggaattatagatatcttggcaacaggatcatactcgggcat 1509
>gb|AF332134.1| Medicago sativa FtsH protease (FtsH) mRNA, complete cds; chloroplast gene for chloroplast product Length = 2352 Score = 184 bits (93), Expect = 3e-43 Identities = 234/279 (83%), Gaps = 4/279 (1%) Strand = Plus / Minus Query: 405 ttgctgaacccaaatctttcaaccatttgtctggcgacacgtgagacctgcatgaagtcg 464 ||||||||||||||||| |||||||| ||||| || || ||||| || ||||||||||| Sbjct: 1893 ttgctgaacccaaatctctcaaccatctgtcttgccactcgtgaaacttgcatgaagtca 1834 Query: 465 ctggatgccccagttgtcacgttgtcttggccaaagatcacctcctcggcaaccctgcca 524 | || |||||||| || || || || |||||||| | |||| ||||||||||| || Sbjct: 1833 tttgacgccccagtggtgacattatcctggccaaaaa---cctcttcggcaacccttcct 1777 Query: 525 ccaagtgccacagccatttggttctctaggtagctcctgctgtacagtccagactcgagc 584 |||||||| || ||||| || ||||| | |||||| || ||||||| ||||||||| ||| Sbjct: 1776 ccaagtgcaaccgccatctgattctccaagtagcttctactgtacaatccagactcaagc 1717 Query: 585 ctctcttcgcttggagcaaaagaacgtgagaccaccagcctgacctcgaggaatgatgga 644 ||||||||||| ||||||||| || |||||||||||||| || || ||||| || || || Sbjct: 1716 ctctcttcgctaggagcaaaa-aaggtgagaccaccagcttggccacgaggtataataga 1658 Query: 645 aatcttggcaacagggtcatattcaggcatcaaggcacc 683 |||||||| ||||||||||||||||||||||| ||||| Sbjct: 1657 tatcttggctacagggtcatattcaggcatcaaagcacc 1619
>emb|Y12780.1|ATAAAA A.thaliana mRNA for ATPase, partial Length = 2190 Score = 178 bits (90), Expect = 2e-41 Identities = 226/270 (83%), Gaps = 1/270 (0%) Strand = Plus / Minus Query: 387 gcaacttgcccgatcttcttgctgaacccaaatctttcaaccatttgtctggcgacacgt 446 |||||||| || ||||| ||||||||||||||||| |||| |||||| | || ||||| Sbjct: 1685 gcaacttgtccaatctttttgctgaacccaaatctctcaatcatttgacgtgccacacga 1626 Query: 447 gagacctgcatgaagtcgctggatgccccagttgtcacgttgtcttggccaaagatcacc 506 || ||||||||||| || | ||||| ||||| ||||| || || | |||||||||||| Sbjct: 1625 gacacctgcatgaaatcatttgatgctccagtcgtcacattctcatccccaaagatcacc 1566 Query: 507 tcctcggcaaccctgccaccaagtgccacagccatttggttctctaggtagctcctgctg 566 ||||| |||||||| || ||||||| ||||||||| ||||| ||||||||||| ||| Sbjct: 1565 tcctctgcaacccttccgccaagtgaacaagccatttgattctcaaggtagctcctactg 1506 Query: 567 tacagtccagactcgagcctctcttcgcttggagcaaaagaacgtgagaccaccagcctg 626 |||| ||||||||| || || |||||||||||||||||| || ||||| |||||||| || Sbjct: 1505 tacaatccagactcaagtctttcttcgcttggagcaaaa-aaagtgagcccaccagcttg 1447 Query: 627 acctcgaggaatgatggaaatcttggcaac 656 || ||||||||||| |||||||| ||||| Sbjct: 1446 gccacgaggaatgatagaaatctttgcaac 1417
>emb|BX815046.1|CNS0AE0R Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS28ZC04 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2428 Score = 174 bits (88), Expect = 3e-40 Identities = 239/288 (82%), Gaps = 1/288 (0%) Strand = Plus / Minus Query: 387 gcaacttgcccgatcttcttgctgaacccaaatctttcaaccatttgtctggcgacacgt 446 |||||||| || ||||| ||||||||||||||||| |||| |||||| | || | ||| Sbjct: 2021 gcaacttgtccaatctttttgctgaacccaaatctctcaatcatttgacgtgccaaacga 1962 Query: 447 gagacctgcatgaagtcgctggatgccccagttgtcacgttgtcttggccaaagatcacc 506 || ||||||||||| || | ||||| ||||| |||| || || | |||||||||||| Sbjct: 1961 gacacctgcatgaaatcatttgatgctccagtcgtcaaattctcatccccaaagatcacc 1902 Query: 507 tcctcggcaaccctgccaccaagtgccacagccatttggttctctaggtagctcctgctg 566 ||||| | || || || |||||||| ||||||||||| ||||| ||||||||||| ||| Sbjct: 1901 tcctctgaaaaacttccgccaagtgcaacagccatttgattctcaaggtagctcctactg 1842 Query: 567 tacagtccagactcgagcctctcttcgcttggagcaaaagaacgtgagaccaccagcctg 626 |||| ||||||||| || || |||||||||||||||||| || ||||| |||||||| || Sbjct: 1841 tacaatccagactcaagtctttcttcgcttggagcaaaa-aaagtgagcccaccagcttg 1783 Query: 627 acctcgaggaatgatggaaatcttggcaacagggtcatattcaggcat 674 || ||||||||||| |||||||| ||||| || |||||||| ||||| Sbjct: 1782 gccacgaggaatgatagaaatctttgcaaccggatcatattctggcat 1735 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Minus Query: 150 ccgtcgatgaagaggctcatgaactcctccccgtccacggtctccttctcgatcaggag 208 ||||| || ||||| ||||||||||| || ||||| || || || |||||||||||||| Sbjct: 2258 ccgtcaataaagagactcatgaactcttcaccgtcaacagtttctttctcgatcaggag 2200
>ref|NM_123592.2| Arabidopsis thaliana VAR1 (VARIEGATED 1); ATP-dependent peptidase/ ATPase/ metallopeptidase AT5G42270 (VAR1) mRNA, complete cds Length = 3058 Score = 161 bits (81), Expect = 4e-36 Identities = 262/321 (81%), Gaps = 1/321 (0%) Strand = Plus / Minus Query: 354 cccaagaaagggtttccaccagatgacccaatcgcaacttgcccgatcttcttgctgaac 413 ||||||||||||||||| || | | |||| |||||||| || ||||| ||||||||| Sbjct: 2059 cccaagaaagggtttcctcctgctccaccaactgcaacttgtccaatctttttgctgaac 2000 Query: 414 ccaaatctttcaaccatttgtctggcgacacgtgagacctgcatgaagtcgctggatgcc 473 || ||||| ||||||||||| | || || || || || |||||||| || | ||||| Sbjct: 1999 ccgaatctctcaaccatttggcgagccacccgcgacacttgcatgaaatcatttgatgct 1940 Query: 474 ccagttgtcacgttgtcttggccaaagatcacctcctcggcaaccctgccaccaagtgcc 533 || |||||||| || || | |||||||||||||| || |||||||| ||||||||||| Sbjct: 1939 ccggttgtcacattctcgtctccaaagatcacctcttctgcaacccttccaccaagtgca 1880 Query: 534 acagccatttggttctctaggtagctcctgctgtacagtccagactcgagcctctcttcg 593 ||||||||||||||||| |||||||| ||||| |||| ||| ||||| |||||||||||| Sbjct: 1879 acagccatttggttctcaaggtagcttctgctatacaatccggactctagcctctcttcg 1820 Query: 594 cttggagcaaaagaacgtgagaccaccagcctgacctcgaggaatgatggaaatcttggc 653 || ||||| ||| || ||||| |||||||| || || || ||||| || || |||||||| Sbjct: 1819 ctaggagcgaaa-aaggtgagcccaccagcttggccacgtggaataatcgatatcttggc 1761 Query: 654 aacagggtcatattcaggcat 674 || || ||||| || ||||| Sbjct: 1760 cactggatcatactccggcat 1740
>gb|AY126987.1| Arabidopsis thaliana AT5g42270/K5J14_7 mRNA, complete cds Length = 2311 Score = 161 bits (81), Expect = 4e-36 Identities = 262/321 (81%), Gaps = 1/321 (0%) Strand = Plus / Minus Query: 354 cccaagaaagggtttccaccagatgacccaatcgcaacttgcccgatcttcttgctgaac 413 ||||||||||||||||| || | | |||| |||||||| || ||||| ||||||||| Sbjct: 1985 cccaagaaagggtttcctcctgctccaccaactgcaacttgtccaatctttttgctgaac 1926 Query: 414 ccaaatctttcaaccatttgtctggcgacacgtgagacctgcatgaagtcgctggatgcc 473 || ||||| ||||||||||| | || || || || || |||||||| || | ||||| Sbjct: 1925 ccgaatctctcaaccatttggcgagccacccgcgacacttgcatgaaatcatttgatgct 1866 Query: 474 ccagttgtcacgttgtcttggccaaagatcacctcctcggcaaccctgccaccaagtgcc 533 || |||||||| || || | |||||||||||||| || |||||||| ||||||||||| Sbjct: 1865 ccggttgtcacattctcgtctccaaagatcacctcttctgcaacccttccaccaagtgca 1806 Query: 534 acagccatttggttctctaggtagctcctgctgtacagtccagactcgagcctctcttcg 593 ||||||||||||||||| |||||||| ||||| |||| ||| ||||| |||||||||||| Sbjct: 1805 acagccatttggttctcaaggtagcttctgctatacaatccggactctagcctctcttcg 1746 Query: 594 cttggagcaaaagaacgtgagaccaccagcctgacctcgaggaatgatggaaatcttggc 653 || ||||| ||| || ||||| |||||||| || || || ||||| || || |||||||| Sbjct: 1745 ctaggagcgaaa-aaggtgagcccaccagcttggccacgtggaataatcgatatcttggc 1687 Query: 654 aacagggtcatattcaggcat 674 || || ||||| || ||||| Sbjct: 1686 cactggatcatactccggcat 1666
>gb|AC007980.1| Arabidopsis thaliana chromosome I BAC F14I3 genomic sequence, complete sequence Length = 100975 Score = 139 bits (70), Expect = 1e-29 Identities = 131/150 (87%), Gaps = 1/150 (0%) Strand = Plus / Minus Query: 525 ccaagtgccacagccatttggttctctaggtagctcctgctgtacagtccagactcgagc 584 |||||||| ||||||||||| ||||| ||||||||||| ||||||| ||||||||| || Sbjct: 61858 ccaagtgcaacagccatttgattctcaaggtagctcctactgtacaatccagactcaagt 61799 Query: 585 ctctcttcgcttggagcaaaagaacgtgagaccaccagcctgacctcgaggaatgatgga 644 || |||||||||||||||||| || ||||| |||||||| || || ||||||||||| || Sbjct: 61798 ctttcttcgcttggagcaaaa-aaagtgagcccaccagcttggccacgaggaatgataga 61740 Query: 645 aatcttggcaacagggtcatattcaggcat 674 |||||| ||||| || |||||||| ||||| Sbjct: 61739 aatctttgcaaccggatcatattctggcat 61710 Score = 85.7 bits (43), Expect = 2e-13 Identities = 112/135 (82%) Strand = Plus / Minus Query: 387 gcaacttgcccgatcttcttgctgaacccaaatctttcaaccatttgtctggcgacacgt 446 |||||||| || ||||| ||||||||||||||||| |||| |||||| | || ||||| Sbjct: 62107 gcaacttgtccaatctttttgctgaacccaaatctctcaatcatttgacgtgccacacga 62048 Query: 447 gagacctgcatgaagtcgctggatgccccagttgtcacgttgtcttggccaaagatcacc 506 || ||||||||||| || | ||||| ||||| ||||| || || | |||||||||||| Sbjct: 62047 gacacctgcatgaaatcatttgatgctccagtcgtcacattctcatccccaaagatcacc 61988 Query: 507 tcctcggcaaccctg 521 ||||| ||||||||| Sbjct: 61987 tcctctgcaaccctg 61973 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Minus Query: 150 ccgtcgatgaagaggctcatgaactcctccccgtccacggtctccttctcgatcaggag 208 ||||| || ||||| ||||||||||| || ||||| || || || |||||||||||||| Sbjct: 62432 ccgtcaataaagagactcatgaactcttcaccgtcaacagtttctttctcgatcaggag 62374
>gb|DQ339462.1| Vitis pseudoreticulata ATPase mRNA, complete cds Length = 600 Score = 137 bits (69), Expect = 5e-29 Identities = 133/153 (86%), Gaps = 1/153 (0%) Strand = Plus / Minus Query: 522 ccaccaagtgccacagccatttggttctctaggtagctcctgctgtacagtccagactcg 581 ||||| ||||| |||||||| || ||||| ||||| || || |||||||||||||||||| Sbjct: 581 ccacccagtgcaacagccatctgattctccaggtaacttctactgtacagtccagactcg 522 Query: 582 agcctctcttcgcttggagcaaaagaacgtgagaccaccagcctgacctcgaggaatgat 641 || |||||||| |||||||||||| || || |||||||| || || || || |||||||| Sbjct: 521 agtctctcttcacttggagcaaaa-aaggtaagaccacctgcttggccacggggaatgat 463 Query: 642 ggaaatcttggcaacagggtcatattcaggcat 674 ||| |||||||| |||||||||||||||||||| Sbjct: 462 ggatatcttggccacagggtcatattcaggcat 430
>dbj|AB023032.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K5J14 Length = 59762 Score = 105 bits (53), Expect = 2e-19 Identities = 129/153 (84%), Gaps = 1/153 (0%) Strand = Plus / Minus Query: 522 ccaccaagtgccacagccatttggttctctaggtagctcctgctgtacagtccagactcg 581 ||||||||||| ||||||||||||||||| |||||||| ||||| |||| ||| ||||| Sbjct: 43080 ccaccaagtgcaacagccatttggttctcaaggtagcttctgctatacaatccggactct 43021 Query: 582 agcctctcttcgcttggagcaaaagaacgtgagaccaccagcctgacctcgaggaatgat 641 |||||||||||||| ||||| ||| || ||||| |||||||| || || || ||||| || Sbjct: 43020 agcctctcttcgctaggagcgaaa-aaggtgagcccaccagcttggccacgtggaataat 42962 Query: 642 ggaaatcttggcaacagggtcatattcaggcat 674 || |||||||| || || ||||| || ||||| Sbjct: 42961 cgatatcttggccactggatcatactccggcat 42929 Score = 61.9 bits (31), Expect = 3e-06 Identities = 133/167 (79%) Strand = Plus / Minus Query: 354 cccaagaaagggtttccaccagatgacccaatcgcaacttgcccgatcttcttgctgaac 413 ||||||||||||||||| || | | |||| |||||||| || ||||| ||||||||| Sbjct: 43337 cccaagaaagggtttcctcctgctccaccaactgcaacttgtccaatctttttgctgaac 43278 Query: 414 ccaaatctttcaaccatttgtctggcgacacgtgagacctgcatgaagtcgctggatgcc 473 || ||||| ||||||||||| | || || || || || |||||||| || | ||||| Sbjct: 43277 ccgaatctctcaaccatttggcgagccacccgcgacacttgcatgaaatcatttgatgct 43218 Query: 474 ccagttgtcacgttgtcttggccaaagatcacctcctcggcaaccct 520 || |||||||| || || | |||||||||||||| || |||||||| Sbjct: 43217 ccggttgtcacattctcgtctccaaagatcacctcttctgcaaccct 43171
>emb|BX572100.1| Prochlorococcus marinus MIT9313 complete genome; segment 6/7 Length = 348071 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 604 aagaacgtgagaccaccagcctgacctcgaggaatgatggaaatctt 650 ||||| ||||||||||| |||||||| |||||||||||||||||||| Sbjct: 154880 aagaatgtgagaccacccgcctgaccacgaggaatgatggaaatctt 154926
>gb|CP000097.1| Synechococcus sp. CC9902, complete genome Length = 2234828 Score = 63.9 bits (32), Expect = 7e-07 Identities = 77/92 (83%) Strand = Plus / Plus Query: 604 aagaacgtgagaccaccagcctgacctcgaggaatgatggaaatcttggcaacagggtca 663 |||||||||||||| || || | || ||||||||||| |||||||| ||| ||||| Sbjct: 1951750 aagaacgtgagaccgccggcattgccgcgaggaatgatcgaaatcttttgaacggggtcg 1951809 Query: 664 tattcaggcatcaaggcaccgacgagggcatg 695 || |||||||||| ||||||||||||||||| Sbjct: 1951810 taatcaggcatcagagcaccgacgagggcatg 1951841
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 50.1 bits (25), Expect = 0.010 Identities = 49/57 (85%) Strand = Plus / Plus Query: 470 tgccccagttgtcacgttgtcttggccaaagatcacctcctcggcaaccctgccacc 526 |||||||||||| || ||||||| ||||| || | |||||| |||||||||||||| Sbjct: 24613541 tgccccagttgtaacattgtcttccccaaaaatgagctcctctgcaaccctgccacc 24613597
>dbj|AP003328.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1040D09 Length = 148102 Score = 50.1 bits (25), Expect = 0.010 Identities = 49/57 (85%) Strand = Plus / Plus Query: 470 tgccccagttgtcacgttgtcttggccaaagatcacctcctcggcaaccctgccacc 526 |||||||||||| || ||||||| ||||| || | |||||| |||||||||||||| Sbjct: 39504 tgccccagttgtaacattgtcttccccaaaaatgagctcctctgcaaccctgccacc 39560
>dbj|AK068431.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013154E14, full insert sequence Length = 1443 Score = 50.1 bits (25), Expect = 0.010 Identities = 49/57 (85%) Strand = Plus / Minus Query: 470 tgccccagttgtcacgttgtcttggccaaagatcacctcctcggcaaccctgccacc 526 |||||||||||| || ||||||| ||||| || | |||||| |||||||||||||| Sbjct: 617 tgccccagttgtaacattgtcttccccaaaaatgagctcctctgcaaccctgccacc 561
>dbj|AK060394.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-010-A12, full insert sequence Length = 1284 Score = 50.1 bits (25), Expect = 0.010 Identities = 49/57 (85%) Strand = Plus / Minus Query: 470 tgccccagttgtcacgttgtcttggccaaagatcacctcctcggcaaccctgccacc 526 |||||||||||| || ||||||| ||||| || | |||||| |||||||||||||| Sbjct: 564 tgccccagttgtaacattgtcttccccaaaaatgagctcctctgcaaccctgccacc 508
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 44.1 bits (22), Expect = 0.61 Identities = 52/62 (83%) Strand = Plus / Minus Query: 634 ggaatgatggaaatcttggcaacagggtcatattcaggcatcaaggcaccgacgagggca 693 ||||||||||| ||||| ||| ||||| || |||||||||| |||||| || |||||| Sbjct: 305613 ggaatgatggagatcttctgaactgggtcgtagtcaggcatcagggcacccacaagggca 305554 Query: 694 tg 695 || Sbjct: 305553 tg 305552
>emb|AL355537.11| Human DNA sequence from clone RP11-442O18 on chromosome 10 Contains three novel genes, complete sequence Length = 188728 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 29 tgtttgcaaaaacaacattttt 50 |||||||||||||||||||||| Sbjct: 113149 tgtttgcaaaaacaacattttt 113128
>gb|AC162693.5| Mus musculus chromosome 15, clone RP24-89G21, complete sequence Length = 159813 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 13 aggaactatacaaacatgttt 33 ||||||||||||||||||||| Sbjct: 121860 aggaactatacaaacatgttt 121840
>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome Length = 2696255 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 658 gggtcatattcaggcatcaaggcaccgac 686 ||||| || |||||||||||||||||||| Sbjct: 1324704 gggtcgtagtcaggcatcaaggcaccgac 1324732
>gb|AC021667.21|AC021667 Mus musculus, clone RP23-304J12, complete sequence Length = 203106 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 13 aggaactatacaaacatgttt 33 ||||||||||||||||||||| Sbjct: 174774 aggaactatacaaacatgttt 174794
>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome Length = 2695903 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 658 gggtcatattcaggcatcaaggcaccgac 686 ||||| || |||||||||||||||||||| Sbjct: 296178 gggtcgtagtcaggcatcaaggcaccgac 296150
>gb|BT016970.1| Zea mays clone E04912707E08.c mRNA sequence Length = 202 Score = 40.1 bits (20), Expect = 9.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 129 gcgacaaacagctccgcctgcccgtcgatgaa 160 |||||||||||||| ||||| ||||| ||||| Sbjct: 162 gcgacaaacagctcggcctggccgtcaatgaa 193 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 60 atgtggttcctacaagctgg 79 |||||||||||||||||||| Sbjct: 62 atgtggttcctacaagctgg 81
>gb|AC009395.7| Drosophila melanogaster clone BACR01D01, complete sequence Length = 189116 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 162 aggctcatgaactcctccccgtcc 185 |||||||||||||||||| ||||| Sbjct: 125479 aggctcatgaactcctcctcgtcc 125502
>gb|AC139758.3| Mus musculus BAC clone RP23-367E7 from chromosome 14, complete sequence Length = 210969 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 556 agctcctgctgtacagtccagact 579 ||||||||||||||||| |||||| Sbjct: 68409 agctcctgctgtacagtgcagact 68432
>gb|AE009134.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 160 of 256 of the complete sequence Length = 13735 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 cctgcccgtcgatgaagagg 164 |||||||||||||||||||| Sbjct: 470 cctgcccgtcgatgaagagg 489
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 aaaacaacatttttactaga 56 |||||||||||||||||||| Sbjct: 30045234 aaaacaacatttttactaga 30045215
>gb|AC130218.4| Mus musculus BAC clone RP23-121N18 from chromosome 18, complete sequence Length = 213673 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 158 gaagaggctcatgaactcct 177 |||||||||||||||||||| Sbjct: 81922 gaagaggctcatgaactcct 81903
>gb|AY094953.1| Drosophila melanogaster RH69586 full insert cDNA Length = 870 Score = 40.1 bits (20), Expect = 9.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 154 cgatgaagaggctcatgaactcctcccc 181 |||||||||||||||| ||||| ||||| Sbjct: 656 cgatgaagaggctcataaactcttcccc 683
>gb|AC144484.5| Medicago truncatula clone mth2-30o16, complete sequence Length = 121144 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 aaacatgtttgcaaaaacaa 43 |||||||||||||||||||| Sbjct: 40718 aaacatgtttgcaaaaacaa 40737
>gb|AC152818.17| Medicago truncatula clone mth2-85g12, complete sequence Length = 142154 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 aaacatgtttgcaaaaacaa 43 |||||||||||||||||||| Sbjct: 40721 aaacatgtttgcaaaaacaa 40740
>emb|AL513542.11| Human DNA sequence from clone RP11-129J12 on chromosome 10 Contains a novel gene and three CpG islands, complete sequence Length = 46619 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 tttacaaggaactatacaaa 26 |||||||||||||||||||| Sbjct: 44932 tttacaaggaactatacaaa 44951
>emb|AL353719.10| Human DNA sequence from clone RP11-85A1 on chromosome 10 Contains the NKX2-3 gene for NK2 transcription factor related, locus 3 (Drosophila), the gene for putative mitochondrial solute carrier (MRS3/4) and five CpG islands, complete sequence Length = 123160 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 tttacaaggaactatacaaa 26 |||||||||||||||||||| Sbjct: 313 tttacaaggaactatacaaa 332
>emb|AL096773.6|HS1000E10 Human DNA sequence from clone RP5-1000E10 on chromosome 1p12-13.3 Contains the 5' end of the gene for a novel protein (FLJ37099), the AMPD1 gene for adenosine monophosphate deaminase 1 (isoform M), the NRAS gene for neuroblastoma RAS viral (v-ras) oncogene homolog, the gene for NRAS-related gene (D1S155E) and the gene for a novel protein (FLJ44339), complete sequence Length = 140207 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 417 aatctttcaaccatttgtct 436 |||||||||||||||||||| Sbjct: 62486 aatctttcaaccatttgtct 62505
>emb|CR925678.1| Ehrlichia ruminantium str. Welgevonden, complete genome Length = 1512977 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 acatttttacaaggaactat 21 |||||||||||||||||||| Sbjct: 1065574 acatttttacaaggaactat 1065593
>emb|CR925677.1| Ehrlichia ruminantium str. Gardel, complete genome Length = 1499920 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 acatttttacaaggaactat 21 |||||||||||||||||||| Sbjct: 1057462 acatttttacaaggaactat 1057481
>emb|CR767821.1| Ehrlichia ruminantium strain Welgevonden, complete genome Length = 1516355 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 acatttttacaaggaactat 21 |||||||||||||||||||| Sbjct: 1086863 acatttttacaaggaactat 1086882
>gb|AC117988.3| Oryza sativa chromosome 3 BAC OSJNBa0057G07 genomic sequence, complete sequence Length = 155106 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 aaaacaacatttttactaga 56 |||||||||||||||||||| Sbjct: 62517 aaaacaacatttttactaga 62536
>gb|AF521085.1| Streptomyces nanchangensis NS3226 polyether ionophore nanchangmycin biosynthetic gene cluster, complete sequence Length = 132544 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 504 acctcctcggcaaccctgcc 523 |||||||||||||||||||| Sbjct: 128885 acctcctcggcaaccctgcc 128866
>emb|AL662953.3|OSJN00153 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0011F23, complete sequence Length = 149353 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 aaaacaacatttttactaga 56 |||||||||||||||||||| Sbjct: 52316 aaaacaacatttttactaga 52335
>ref|NM_169826.1| Drosophila melanogaster CG31224-RA (CG31224), mRNA Length = 7059 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 162 aggctcatgaactcctccccgtcc 185 |||||||||||||||||| ||||| Sbjct: 2447 aggctcatgaactcctcctcgtcc 2424
>ref|NM_078959.3| Drosophila melanogaster Peroxiredoxin 2540 CG11765-RA (Prx2540-2), mRNA Length = 868 Score = 40.1 bits (20), Expect = 9.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 154 cgatgaagaggctcatgaactcctcccc 181 |||||||||||||||| ||||| ||||| Sbjct: 657 cgatgaagaggctcataaactcttcccc 684
>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome Length = 2841581 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 cctgcccgtcgatgaagagg 164 |||||||||||||||||||| Sbjct: 1766640 cctgcccgtcgatgaagagg 1766659
>gb|AY075377.1| Drosophila melanogaster LD06123 full length cDNA Length = 3188 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 162 aggctcatgaactcctccccgtcc 185 |||||||||||||||||| ||||| Sbjct: 2447 aggctcatgaactcctcctcgtcc 2424
>gb|AY070952.1| Drosophila melanogaster RE05093 full length cDNA Length = 870 Score = 40.1 bits (20), Expect = 9.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 154 cgatgaagaggctcatgaactcctcccc 181 |||||||||||||||| ||||| ||||| Sbjct: 655 cgatgaagaggctcataaactcttcccc 682
>gb|CP000236.1| Ehrlichia chaffeensis str. Arkansas, complete genome Length = 1176248 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 1 tacatttttacaaggaactataca 24 |||||||||||||||||| ||||| Sbjct: 350177 tacatttttacaaggaaccataca 350154
>gb|AC008632.6|AC008632 Homo sapiens chromosome 5 clone CTB-164N12, complete sequence Length = 112687 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 530 tgccacagccatttggttct 549 |||||||||||||||||||| Sbjct: 59771 tgccacagccatttggttct 59752
>gb|AF480497.1| Oryza sativa clone BAC 24K23, complete sequence Length = 181577 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 aaaacaacatttttactaga 56 |||||||||||||||||||| Sbjct: 52509 aaaacaacatttttactaga 52528
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 aaaacaacatttttactaga 56 |||||||||||||||||||| Sbjct: 33621256 aaaacaacatttttactaga 33621275
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 aaaacaacatttttactaga 56 |||||||||||||||||||| Sbjct: 18087307 aaaacaacatttttactaga 18087326
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 aaaacaacatttttactaga 56 |||||||||||||||||||| Sbjct: 30136656 aaaacaacatttttactaga 30136637
>gb|AC007398.6|AC007398 Drosophila melanogaster, chromosome 2R, region 47A-47B, BAC clone BACR20O22, complete sequence Length = 168567 Score = 40.1 bits (20), Expect = 9.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 154 cgatgaagaggctcatgaactcctcccc 181 |||||||||||||||| ||||| ||||| Sbjct: 77043 cgatgaagaggctcataaactcttcccc 77070
>gb|AC007812.6|AC007812 Drosophila melanogaster, chromosome 3R, region 91C-91C, BAC clone BACR01F15, complete sequence Length = 186989 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 162 aggctcatgaactcctccccgtcc 185 |||||||||||||||||| ||||| Sbjct: 35762 aggctcatgaactcctcctcgtcc 35785
>gb|AC008663.6|AC008663 Homo sapiens chromosome 5 clone CTB-33O18, complete sequence Length = 142859 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 530 tgccacagccatttggttct 549 |||||||||||||||||||| Sbjct: 132432 tgccacagccatttggttct 132413
>gb|AC068279.6| Homo sapiens BAC clone RP11-153P14 from 2, complete sequence Length = 135351 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 638 tgatggaaatcttggcaaca 657 |||||||||||||||||||| Sbjct: 6678 tgatggaaatcttggcaaca 6697
>gb|BT003589.1| Drosophila melanogaster LD03662 full insert cDNA Length = 2508 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 162 aggctcatgaactcctccccgtcc 185 |||||||||||||||||| ||||| Sbjct: 1241 aggctcatgaactcctcctcgtcc 1218
>gb|AC017002.4| Homo sapiens BAC clone RP11-68E19 from 2, complete sequence Length = 205662 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 638 tgatggaaatcttggcaaca 657 |||||||||||||||||||| Sbjct: 109088 tgatggaaatcttggcaaca 109069
>dbj|AP003520.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0021H10 Length = 142659 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 catgtttgcaaaaacaacat 46 |||||||||||||||||||| Sbjct: 14070 catgtttgcaaaaacaacat 14089
>gb|AC140071.4| Mus musculus BAC clone RP23-394K8 from 3, complete sequence Length = 203896 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 atacaaacatgtttgcaaaa 39 |||||||||||||||||||| Sbjct: 48422 atacaaacatgtttgcaaaa 48441
>emb|CR450802.8| Zebrafish DNA sequence from clone CH211-197I12 in linkage group 22, complete sequence Length = 186908 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 tgcaaaaacaacatttttac 52 |||||||||||||||||||| Sbjct: 35478 tgcaaaaacaacatttttac 35459
>emb|AL772158.6| Zebrafish DNA sequence from clone CH211-128N21 in linkage group 22, complete sequence Length = 178046 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 tgcaaaaacaacatttttac 52 |||||||||||||||||||| Sbjct: 29442 tgcaaaaacaacatttttac 29461
>emb|BX005362.6| Zebrafish DNA sequence from clone CH211-159C12 in linkage group 22, complete sequence Length = 178151 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 tgcaaaaacaacatttttac 52 |||||||||||||||||||| Sbjct: 144817 tgcaaaaacaacatttttac 144836
>gb|AE003723.5| Drosophila melanogaster chromosome 3R, section 61 of 118 of the complete sequence Length = 255619 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 162 aggctcatgaactcctccccgtcc 185 |||||||||||||||||| ||||| Sbjct: 48507 aggctcatgaactcctcctcgtcc 48530
>gb|AE003829.4| Drosophila melanogaster chromosome 2R, section 21 of 73 of the complete sequence Length = 281782 Score = 40.1 bits (20), Expect = 9.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 154 cgatgaagaggctcatgaactcctcccc 181 |||||||||||||||| ||||| ||||| Sbjct: 55947 cgatgaagaggctcataaactcttcccc 55974
>dbj|AB100244.1| Penicillium camemberti pyrG gene for orotidine-5'-phosphate decarboxylase, complete cds Length = 2580 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 224 gaggatgtcgatgtgggtgttgat 247 |||||||||||||||||| ||||| Sbjct: 1353 gaggatgtcgatgtgggttttgat 1330
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 aaaacaacatttttactaga 56 |||||||||||||||||||| Sbjct: 18013628 aaaacaacatttttactaga 18013647
>emb|AL845343.5|CNS08CB5 Oryza sativa chromosome 12, . BAC OSJNBa0028O09 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 155927 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 aaaacaacatttttactaga 56 |||||||||||||||||||| Sbjct: 40985 aaaacaacatttttactaga 41004
>emb|CR974592.5| Mouse DNA sequence from clone RP23-56C15 on chromosome 12, complete sequence Length = 201549 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 tttgcaaaaacaacattttt 50 |||||||||||||||||||| Sbjct: 20409 tttgcaaaaacaacattttt 20428
>gb|CP000036.1| Shigella boydii Sb227, complete genome Length = 4519823 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 320 catcgagtagtccttctggc 339 |||||||||||||||||||| Sbjct: 2170771 catcgagtagtccttctggc 2170790
>gb|CP000038.1| Shigella sonnei Ss046, complete genome Length = 4825265 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 320 catcgagtagtccttctggc 339 |||||||||||||||||||| Sbjct: 970532 catcgagtagtccttctggc 970551 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,193,550 Number of Sequences: 3902068 Number of extensions: 5193550 Number of successful extensions: 97411 Number of sequences better than 10.0: 82 Number of HSP's better than 10.0 without gapping: 83 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 96753 Number of HSP's gapped (non-prelim): 631 length of query: 698 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 675 effective length of database: 17,143,297,704 effective search space: 11571725950200 effective search space used: 11571725950200 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)