ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd22d20 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK068774.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013159D03, full insert sequence Length = 3197 Score = 276 bits (139), Expect = 8e-71 Identities = 303/357 (84%), Gaps = 3/357 (0%) Strand = Plus / Minus Query: 282 cgccggccatcctggtgatccgctcgatctcgctcaccgcctcccccatggacggccggt 341 ||||||||| | ||| |||||||||||||||| || ||||| |||||||| || |||| Sbjct: 2870 cgccggccaccttggcgatccgctcgatctcggcgacggcctcgcccatggaggggcggt 2811 Query: 342 cggcgccggcctcctccacgcatcgcagtgccaggtccacgtactgctccagcccgccca 401 ||||||||| |||||| ||||| || || |||||||| |||||| |||| || ||| | | Sbjct: 2810 cggcgccggactcctcgacgcagcggagggccaggtcgacgtacggctcgaggccggcga 2751 Query: 402 gcgacgacggcgacgcgcccagcaccgggtccagcaggtcgtgcaggccgtacaggtcct 461 ||| ||| | | || |||||| | ||||| || || ||||| |||||||||| ||||| Sbjct: 2750 gcgccgagg---aggcccccagcgcggggtcgaggagctcgtggaggccgtacatgtcct 2694 Query: 462 tgccccggtccagtgccgccaccacctcccggacgatgtaccgcccgcgctccagcggct 521 ||| ||||||| ||| || ||||||||||| | ||| || |||||||||||||||| Sbjct: 2693 tgcggcggtccaccgcctccttgacctcccggaccacgtagcggccgcgctccagcggct 2634 Query: 522 tcttggccgtgatcatctccagcagcagcacgccgaagctgtacacgtcgctcttctccg 581 || | |||||||||| ||||||||||||||||||||||||||||||||||||| |||| Sbjct: 2633 tcctcgccgtgatcacctccagcagcagcacgccgaagctgtacacgtcgctccggtccg 2574 Query: 582 tcagctgctgcgtcatgtagtactcagggtccaggtaccccattgtgcccttgactt 638 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 2573 tcagctgctgcgtcatgtagtactccgggtccaggtaccccattgtgcccttgactt 2517 Score = 87.7 bits (44), Expect = 4e-14 Identities = 108/130 (83%), Gaps = 12/130 (9%) Strand = Plus / Minus Query: 152 cttcacttgggctccaccctcgatgacggcagcccgccgccgctgtactccgacgggctg 211 ||||||||||||||||||||| |||||||||||||||||||| |||||||||| |||| Sbjct: 3027 cttcacttgggctccaccctcatcgacggcagcccgccgccgctatactccgacgcgctg 2968 Query: 212 tctccacc---------ataggggtggcgcggcgtcctgct---ggcgtagctcatggac 259 || || || |||||||||||||||||||| ||| ||||||||||||||| Sbjct: 2967 tcgccgccgccgccgccataggggtggcgcggcgtccggctagcggcgtagctcatggag 2908 Query: 260 tcggacgccg 269 || ||||||| Sbjct: 2907 tccgacgccg 2898
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 244 bits (123), Expect = 3e-61 Identities = 287/341 (84%), Gaps = 3/341 (0%) Strand = Plus / Minus Query: 282 cgccggccatcctggtgatccgctcgatctcgctcaccgcctcccccatggacggccggt 341 ||||||||| | ||| |||||||||||||||| || ||||| |||||||| || |||| Sbjct: 5771896 cgccggccaccttggcgatccgctcgatctcggcgacggcctcgcccatggaggggcggt 5771837 Query: 342 cggcgccggcctcctccacgcatcgcagtgccaggtccacgtactgctccagcccgccca 401 ||||||||| |||||| ||||| || || |||||||| |||||| |||| || ||| | | Sbjct: 5771836 cggcgccggactcctcgacgcagcggagggccaggtcgacgtacggctcgaggccggcga 5771777 Query: 402 gcgacgacggcgacgcgcccagcaccgggtccagcaggtcgtgcaggccgtacaggtcct 461 ||| ||| | | || |||||| | ||||| || || ||||| |||||||||| ||||| Sbjct: 5771776 gcgccgagg---aggcccccagcgcggggtcgaggagctcgtggaggccgtacatgtcct 5771720 Query: 462 tgccccggtccagtgccgccaccacctcccggacgatgtaccgcccgcgctccagcggct 521 ||| ||||||| ||| || ||||||||||| | ||| || |||||||||||||||| Sbjct: 5771719 tgcggcggtccaccgcctccttgacctcccggaccacgtagcggccgcgctccagcggct 5771660 Query: 522 tcttggccgtgatcatctccagcagcagcacgccgaagctgtacacgtcgctcttctccg 581 || | |||||||||| ||||||||||||||||||||||||||||||||||||| |||| Sbjct: 5771659 tcctcgccgtgatcacctccagcagcagcacgccgaagctgtacacgtcgctccggtccg 5771600 Query: 582 tcagctgctgcgtcatgtagtactcagggtccaggtacccc 622 ||||||||||||||||||||||||| ||||||||||||||| Sbjct: 5771599 tcagctgctgcgtcatgtagtactccgggtccaggtacccc 5771559 Score = 87.7 bits (44), Expect = 4e-14 Identities = 108/130 (83%), Gaps = 12/130 (9%) Strand = Plus / Minus Query: 152 cttcacttgggctccaccctcgatgacggcagcccgccgccgctgtactccgacgggctg 211 ||||||||||||||||||||| |||||||||||||||||||| |||||||||| |||| Sbjct: 5772053 cttcacttgggctccaccctcatcgacggcagcccgccgccgctatactccgacgcgctg 5771994 Query: 212 tctccacc---------ataggggtggcgcggcgtcctgct---ggcgtagctcatggac 259 || || || |||||||||||||||||||| ||| ||||||||||||||| Sbjct: 5771993 tcgccgccgccgccgccataggggtggcgcggcgtccggctagcggcgtagctcatggag 5771934 Query: 260 tcggacgccg 269 || ||||||| Sbjct: 5771933 tccgacgccg 5771924 Score = 77.8 bits (39), Expect = 4e-11 Identities = 42/43 (97%) Strand = Plus / Minus Query: 542 agcagcagcacgccgaagctgtacacgtcgctcttctccgtca 584 ||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 27147986 agcagcaccacgccgaagctgtacacgtcgctcttctccgtca 27147944 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 536 atctccagcagcagcacgccgaagctgtacacgtcg 571 ||||||||||||| || ||||||||||||||||||| Sbjct: 27512850 atctccagcagcaccatgccgaagctgtacacgtcg 27512815 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 551 acgccgaagctgtacacgtcgctcttctc 579 |||||||||||||| |||||||||||||| Sbjct: 23372295 acgccgaagctgtagacgtcgctcttctc 23372323 Score = 48.1 bits (24), Expect = 0.036 Identities = 30/32 (93%) Strand = Plus / Minus Query: 536 atctccagcagcagcacgccgaagctgtacac 567 |||||||| |||| |||||||||||||||||| Sbjct: 20840950 atctccaggagcaccacgccgaagctgtacac 20840919 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Plus Query: 548 agcacgccgaagctgtacacgtcg 571 |||||||||||||||||||||||| Sbjct: 2250932 agcacgccgaagctgtacacgtcg 2250955 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Minus Query: 551 acgccgaagctgtacacgtcgctctt 576 |||||||||||||| ||||||||||| Sbjct: 25059425 acgccgaagctgtagacgtcgctctt 25059400 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 551 acgccgaagctgtacacgtcg 571 ||||||||||||||||||||| Sbjct: 25756736 acgccgaagctgtacacgtcg 25756756 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 545 agcagcacgccgaagctgtacacgtcgc 572 |||| ||| ||||||||||||||||||| Sbjct: 27161653 agcaccaccccgaagctgtacacgtcgc 27161626 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 551 acgccgaagctgtacacgtc 570 |||||||||||||||||||| Sbjct: 25645548 acgccgaagctgtacacgtc 25645529 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 551 acgccgaagctgtacacgtc 570 |||||||||||||||||||| Sbjct: 25629515 acgccgaagctgtacacgtc 25629496 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 553 gccgaagctgtacacgtcgc 572 |||||||||||||||||||| Sbjct: 18402695 gccgaagctgtacacgtcgc 18402676 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 226 gtggcgcggcgtcctgctggcgta 249 ||||||||||||| |||||||||| Sbjct: 7997366 gtggcgcggcgtcgtgctggcgta 7997389
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 244 bits (123), Expect = 3e-61 Identities = 287/341 (84%), Gaps = 3/341 (0%) Strand = Plus / Minus Query: 282 cgccggccatcctggtgatccgctcgatctcgctcaccgcctcccccatggacggccggt 341 ||||||||| | ||| |||||||||||||||| || ||||| |||||||| || |||| Sbjct: 5771889 cgccggccaccttggcgatccgctcgatctcggcgacggcctcgcccatggaggggcggt 5771830 Query: 342 cggcgccggcctcctccacgcatcgcagtgccaggtccacgtactgctccagcccgccca 401 ||||||||| |||||| ||||| || || |||||||| |||||| |||| || ||| | | Sbjct: 5771829 cggcgccggactcctcgacgcagcggagggccaggtcgacgtacggctcgaggccggcga 5771770 Query: 402 gcgacgacggcgacgcgcccagcaccgggtccagcaggtcgtgcaggccgtacaggtcct 461 ||| ||| | | || |||||| | ||||| || || ||||| |||||||||| ||||| Sbjct: 5771769 gcgccgagg---aggcccccagcgcggggtcgaggagctcgtggaggccgtacatgtcct 5771713 Query: 462 tgccccggtccagtgccgccaccacctcccggacgatgtaccgcccgcgctccagcggct 521 ||| ||||||| ||| || ||||||||||| | ||| || |||||||||||||||| Sbjct: 5771712 tgcggcggtccaccgcctccttgacctcccggaccacgtagcggccgcgctccagcggct 5771653 Query: 522 tcttggccgtgatcatctccagcagcagcacgccgaagctgtacacgtcgctcttctccg 581 || | |||||||||| ||||||||||||||||||||||||||||||||||||| |||| Sbjct: 5771652 tcctcgccgtgatcacctccagcagcagcacgccgaagctgtacacgtcgctccggtccg 5771593 Query: 582 tcagctgctgcgtcatgtagtactcagggtccaggtacccc 622 ||||||||||||||||||||||||| ||||||||||||||| Sbjct: 5771592 tcagctgctgcgtcatgtagtactccgggtccaggtacccc 5771552 Score = 87.7 bits (44), Expect = 4e-14 Identities = 108/130 (83%), Gaps = 12/130 (9%) Strand = Plus / Minus Query: 152 cttcacttgggctccaccctcgatgacggcagcccgccgccgctgtactccgacgggctg 211 ||||||||||||||||||||| |||||||||||||||||||| |||||||||| |||| Sbjct: 5772046 cttcacttgggctccaccctcatcgacggcagcccgccgccgctatactccgacgcgctg 5771987 Query: 212 tctccacc---------ataggggtggcgcggcgtcctgct---ggcgtagctcatggac 259 || || || |||||||||||||||||||| ||| ||||||||||||||| Sbjct: 5771986 tcgccgccgccgccgccataggggtggcgcggcgtccggctagcggcgtagctcatggag 5771927 Query: 260 tcggacgccg 269 || ||||||| Sbjct: 5771926 tccgacgccg 5771917 Score = 77.8 bits (39), Expect = 4e-11 Identities = 42/43 (97%) Strand = Plus / Minus Query: 542 agcagcagcacgccgaagctgtacacgtcgctcttctccgtca 584 ||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 27073583 agcagcaccacgccgaagctgtacacgtcgctcttctccgtca 27073541 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 536 atctccagcagcagcacgccgaagctgtacacgtcg 571 ||||||||||||| || ||||||||||||||||||| Sbjct: 27438408 atctccagcagcaccatgccgaagctgtacacgtcg 27438373 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 551 acgccgaagctgtacacgtcgctcttctc 579 |||||||||||||| |||||||||||||| Sbjct: 23300486 acgccgaagctgtagacgtcgctcttctc 23300514 Score = 48.1 bits (24), Expect = 0.036 Identities = 30/32 (93%) Strand = Plus / Minus Query: 536 atctccagcagcagcacgccgaagctgtacac 567 |||||||| |||| |||||||||||||||||| Sbjct: 20767164 atctccaggagcaccacgccgaagctgtacac 20767133 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Plus Query: 548 agcacgccgaagctgtacacgtcg 571 |||||||||||||||||||||||| Sbjct: 2250876 agcacgccgaagctgtacacgtcg 2250899 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Minus Query: 551 acgccgaagctgtacacgtcgctctt 576 |||||||||||||| ||||||||||| Sbjct: 24987630 acgccgaagctgtagacgtcgctctt 24987605 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 551 acgccgaagctgtacacgtcg 571 ||||||||||||||||||||| Sbjct: 25684912 acgccgaagctgtacacgtcg 25684932 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 545 agcagcacgccgaagctgtacacgtcgc 572 |||| ||| ||||||||||||||||||| Sbjct: 27087253 agcaccaccccgaagctgtacacgtcgc 27087226 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 551 acgccgaagctgtacacgtc 570 |||||||||||||||||||| Sbjct: 25573724 acgccgaagctgtacacgtc 25573705 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 551 acgccgaagctgtacacgtc 570 |||||||||||||||||||| Sbjct: 25557691 acgccgaagctgtacacgtc 25557672 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 553 gccgaagctgtacacgtcgc 572 |||||||||||||||||||| Sbjct: 18328921 gccgaagctgtacacgtcgc 18328902 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 226 gtggcgcggcgtcctgctggcgta 249 ||||||||||||| |||||||||| Sbjct: 7997247 gtggcgcggcgtcgtgctggcgta 7997270
>emb|AL954853.5|CNS08CD7 Oryza sativa chromosome 12, . BAC OSJNBb0071I17 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 159056 Score = 244 bits (123), Expect = 3e-61 Identities = 287/341 (84%), Gaps = 3/341 (0%) Strand = Plus / Minus Query: 282 cgccggccatcctggtgatccgctcgatctcgctcaccgcctcccccatggacggccggt 341 ||||||||| | ||| |||||||||||||||| || ||||| |||||||| || |||| Sbjct: 126419 cgccggccaccttggcgatccgctcgatctcggcgacggcctcgcccatggaggggcggt 126360 Query: 342 cggcgccggcctcctccacgcatcgcagtgccaggtccacgtactgctccagcccgccca 401 ||||||||| |||||| ||||| || || |||||||| |||||| |||| || ||| | | Sbjct: 126359 cggcgccggactcctcgacgcagcggagggccaggtcgacgtacggctcgaggccggcga 126300 Query: 402 gcgacgacggcgacgcgcccagcaccgggtccagcaggtcgtgcaggccgtacaggtcct 461 ||| ||| | | || |||||| | ||||| || || ||||| |||||||||| ||||| Sbjct: 126299 gcgccgagg---aggcccccagcgcggggtcgaggagctcgtggaggccgtacatgtcct 126243 Query: 462 tgccccggtccagtgccgccaccacctcccggacgatgtaccgcccgcgctccagcggct 521 ||| ||||||| ||| || ||||||||||| | ||| || |||||||||||||||| Sbjct: 126242 tgcggcggtccaccgcctccttgacctcccggaccacgtagcggccgcgctccagcggct 126183 Query: 522 tcttggccgtgatcatctccagcagcagcacgccgaagctgtacacgtcgctcttctccg 581 || | |||||||||| ||||||||||||||||||||||||||||||||||||| |||| Sbjct: 126182 tcctcgccgtgatcacctccagcagcagcacgccgaagctgtacacgtcgctccggtccg 126123 Query: 582 tcagctgctgcgtcatgtagtactcagggtccaggtacccc 622 ||||||||||||||||||||||||| ||||||||||||||| Sbjct: 126122 tcagctgctgcgtcatgtagtactccgggtccaggtacccc 126082 Score = 87.7 bits (44), Expect = 4e-14 Identities = 108/130 (83%), Gaps = 12/130 (9%) Strand = Plus / Minus Query: 152 cttcacttgggctccaccctcgatgacggcagcccgccgccgctgtactccgacgggctg 211 ||||||||||||||||||||| |||||||||||||||||||| |||||||||| |||| Sbjct: 126576 cttcacttgggctccaccctcatcgacggcagcccgccgccgctatactccgacgcgctg 126517 Query: 212 tctccacc---------ataggggtggcgcggcgtcctgct---ggcgtagctcatggac 259 || || || |||||||||||||||||||| ||| ||||||||||||||| Sbjct: 126516 tcgccgccgccgccgccataggggtggcgcggcgtccggctagcggcgtagctcatggag 126457 Query: 260 tcggacgccg 269 || ||||||| Sbjct: 126456 tccgacgccg 126447
>ref|XM_475450.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2730 Score = 137 bits (69), Expect = 5e-29 Identities = 93/101 (92%) Strand = Plus / Minus Query: 538 ctccagcagcagcacgccgaagctgtacacgtcgctcttctccgtcagctgctgcgtcat 597 |||||||| || ||| |||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 2289 ctccagcatcaccaccccgaagctgtacacgtcgctcttctccgacagctgctgcgtcat 2230 Query: 598 gtagtactcagggtccaggtaccccattgtgcccttgactt 638 ||||||||| ||||||||||| |||| ||| |||||||||| Sbjct: 2229 gtagtactccgggtccaggtagcccagtgttcccttgactt 2189
>dbj|AK119823.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-177-D06, full insert sequence Length = 3176 Score = 137 bits (69), Expect = 5e-29 Identities = 93/101 (92%) Strand = Plus / Minus Query: 538 ctccagcagcagcacgccgaagctgtacacgtcgctcttctccgtcagctgctgcgtcat 597 |||||||| || ||| |||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 2587 ctccagcatcaccaccccgaagctgtacacgtcgctcttctccgacagctgctgcgtcat 2528 Query: 598 gtagtactcagggtccaggtaccccattgtgcccttgactt 638 ||||||||| ||||||||||| |||| ||| |||||||||| Sbjct: 2527 gtagtactccgggtccaggtagcccagtgttcccttgactt 2487
>dbj|AK105683.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-B07, full insert sequence Length = 2509 Score = 137 bits (69), Expect = 5e-29 Identities = 93/101 (92%) Strand = Plus / Minus Query: 538 ctccagcagcagcacgccgaagctgtacacgtcgctcttctccgtcagctgctgcgtcat 597 |||||||| || ||| |||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1912 ctccagcatcaccaccccgaagctgtacacgtcgctcttctccgacagctgctgcgtcat 1853 Query: 598 gtagtactcagggtccaggtaccccattgtgcccttgactt 638 ||||||||| ||||||||||| |||| ||| |||||||||| Sbjct: 1852 gtagtactccgggtccaggtagcccagtgttcccttgactt 1812
>gb|AC093952.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1004_E02, complete sequence Length = 127642 Score = 121 bits (61), Expect = 3e-24 Identities = 76/81 (93%) Strand = Plus / Plus Query: 538 ctccagcagcagcacgccgaagctgtacacgtcgctcttctccgtcagctgctgcgtcat 597 |||||||| || ||| |||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 35707 ctccagcatcaccaccccgaagctgtacacgtcgctcttctccgacagctgctgcgtcat 35766 Query: 598 gtagtactcagggtccaggta 618 ||||||||| ||||||||||| Sbjct: 35767 gtagtactccgggtccaggta 35787
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 121 bits (61), Expect = 3e-24 Identities = 76/81 (93%) Strand = Plus / Plus Query: 538 ctccagcagcagcacgccgaagctgtacacgtcgctcttctccgtcagctgctgcgtcat 597 |||||||| || ||| |||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 23754886 ctccagcatcaccaccccgaagctgtacacgtcgctcttctccgacagctgctgcgtcat 23754945 Query: 598 gtagtactcagggtccaggta 618 ||||||||| ||||||||||| Sbjct: 23754946 gtagtactccgggtccaggta 23754966 Score = 87.7 bits (44), Expect = 4e-14 Identities = 47/48 (97%) Strand = Plus / Plus Query: 542 agcagcagcacgccgaagctgtacacgtcgctcttctccgtcagctgc 589 |||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20618250 agcaccagcacgccgaagctgtacacgtcgctcttctccgtcagctgc 20618297 Score = 81.8 bits (41), Expect = 3e-12 Identities = 59/65 (90%) Strand = Plus / Minus Query: 554 ccgaagctgtacacgtcgctcttctccgtcagctgctgcgtcatgtagtactcagggtcc 613 |||||||||||||| ||||||||| | || |||||||| |||||||||||||| |||||| Sbjct: 13705799 ccgaagctgtacacatcgctcttcgctgtgagctgctgtgtcatgtagtactccgggtcc 13705740 Query: 614 aggta 618 ||||| Sbjct: 13705739 aggta 13705735 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 545 agcagcacgccgaagctgtacacgtcgctcttctccgtcagctg 588 |||| |||||||||||||||||| |||||||| ||||| ||||| Sbjct: 27146594 agcaccacgccgaagctgtacacatcgctcttgtccgtgagctg 27146551 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 530 gtgatcatctccagcagcagcacgccgaagctgtacacgtcgctctt 576 ||||||||||| || |||| ||| ||||||||||||||||| ||||| Sbjct: 4116934 gtgatcatctcgagtagcaccacaccgaagctgtacacgtcactctt 4116888 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 554 ccgaagctgtacacgtcgctcttctccgtc 583 ||||||||||||||||||| |||||||||| Sbjct: 28935620 ccgaagctgtacacgtcgcccttctccgtc 28935591 Score = 50.1 bits (25), Expect = 0.009 Identities = 43/49 (87%) Strand = Plus / Plus Query: 528 ccgtgatcatctccagcagcagcacgccgaagctgtacacgtcgctctt 576 |||| |||| ||||||||||| ||| || |||||||| ||||||||||| Sbjct: 29457794 ccgttatcagctccagcagcaccaccccaaagctgtaaacgtcgctctt 29457842 Score = 44.1 bits (22), Expect = 0.56 Identities = 37/42 (88%) Strand = Plus / Plus Query: 530 gtgatcatctccagcagcagcacgccgaagctgtacacgtcg 571 ||||||| ||| || |||| ||| |||||||||||||||||| Sbjct: 25822558 gtgatcagctcgaggagcaccaccccgaagctgtacacgtcg 25822599 Score = 44.1 bits (22), Expect = 0.56 Identities = 31/34 (91%) Strand = Plus / Minus Query: 469 gtccagtgccgccaccacctcccggacgatgtac 502 ||||||||||| | ||||||||||||||||||| Sbjct: 13705884 gtccagtgccgtcttcacctcccggacgatgtac 13705851 Score = 44.1 bits (22), Expect = 0.56 Identities = 31/34 (91%) Strand = Plus / Minus Query: 538 ctccagcagcagcacgccgaagctgtacacgtcg 571 |||||||| |||| ||||||||||| |||||||| Sbjct: 1396171 ctccagcaccagcgcgccgaagctgaacacgtcg 1396138
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 109 bits (55), Expect = 1e-20 Identities = 115/135 (85%) Strand = Plus / Minus Query: 484 cacctcccggacgatgtaccgcccgcgctccagcggcttcttggccgtgatcatctccag 543 ||||||||||||||||||| ||| ||| | ||||| |||||| |||||| ||| || Sbjct: 12095574 cacctcccggacgatgtacttccctttctcgatcggctgcttggcgatgatcagctcgag 12095515 Query: 544 cagcagcacgccgaagctgtacacgtcgctcttctccgtcagctgctgcgtcatgtagta 603 || || ||| |||||||||||||||||||||||||| ||||||||||| | ||||||||| Sbjct: 12095514 catcaccaccccgaagctgtacacgtcgctcttctcggtcagctgctgggacatgtagta 12095455 Query: 604 ctcagggtccaggta 618 ||| || |||||||| Sbjct: 12095454 ctcgggatccaggta 12095440 Score = 85.7 bits (43), Expect = 2e-13 Identities = 49/51 (96%) Strand = Plus / Minus Query: 538 ctccagcagcagcacgccgaagctgtacacgtcgctcttctccgtcagctg 588 |||||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct: 33156552 ctccagcaccaccacgccgaagctgtacacgtcgctcttctccgtcagctg 33156502 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 538 ctccagcagcagcacgccgaagctgtacacgtcgctcttctccgtcag 585 ||||||||||| ||||||||||| |||||||||||||||| ||||||| Sbjct: 4160054 ctccagcagcaccacgccgaagccgtacacgtcgctcttcgccgtcag 4160007 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 520 cttcttggccgtgatcatctccagcagcagcacgccgaagctgtacacgtcgctcttctc 579 |||| |||||||||| ||||| | |||| |||||||||||||||||||||||||| || Sbjct: 6561684 cttcatggccgtgatgatctcgacgagcacgacgccgaagctgtacacgtcgctcttgtc 6561625 Query: 580 cg 581 || Sbjct: 6561624 cg 6561623 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 542 agcagcagcacgccgaagctgtacacgtcgctcttct 578 ||||||||||||||||||||||| || |||||||||| Sbjct: 711619 agcagcagcacgccgaagctgtagacatcgctcttct 711655 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 545 agcagcacgccgaagctgtacacgtcg 571 ||||||||||||||||||||||||||| Sbjct: 6406105 agcagcacgccgaagctgtacacgtcg 6406079 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 551 acgccgaagctgtacacgtcgctctt 576 |||||||||||||||||||||||||| Sbjct: 24686336 acgccgaagctgtacacgtcgctctt 24686361 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 551 acgccgaagctgtacacgtcgctctt 576 |||||||||||||||||||||||||| Sbjct: 24647209 acgccgaagctgtacacgtcgctctt 24647234 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 554 ccgaagctgtacacgtcgctcttctc 579 |||||||||||||||||||||||||| Sbjct: 6773544 ccgaagctgtacacgtcgctcttctc 6773569 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 528 ccgtgatcatctccagcagcagcacgccgaagctgtacacgtcgctcttc 577 |||||| || ||| ||||||| ||||||||||| ||||||||| |||||| Sbjct: 1755024 ccgtgagcagctcaagcagcaccacgccgaagcagtacacgtcactcttc 1754975 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Minus Query: 578 tccgtcagctgctgcgtcatgtagtactcagggtccaggta 618 |||||||||||||||||| || ||||||| ||||| ||||| Sbjct: 1387883 tccgtcagctgctgcgtcttgaagtactccgggtcgaggta 1387843 Score = 48.1 bits (24), Expect = 0.036 Identities = 33/36 (91%) Strand = Plus / Plus Query: 538 ctccagcagcagcacgccgaagctgtacacgtcgct 573 ||||| ||||||||||||||||||||| | |||||| Sbjct: 6732338 ctccatcagcagcacgccgaagctgtagatgtcgct 6732373 Score = 46.1 bits (23), Expect = 0.14 Identities = 35/39 (89%) Strand = Plus / Minus Query: 538 ctccagcagcagcacgccgaagctgtacacgtcgctctt 576 |||||| |||| |||||| ||||||||||||||||||| Sbjct: 14046567 ctccaggagcacgacgccgtagctgtacacgtcgctctt 14046529
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 109 bits (55), Expect = 1e-20 Identities = 115/135 (85%) Strand = Plus / Minus Query: 484 cacctcccggacgatgtaccgcccgcgctccagcggcttcttggccgtgatcatctccag 543 ||||||||||||||||||| ||| ||| | ||||| |||||| |||||| ||| || Sbjct: 12092337 cacctcccggacgatgtacttccctttctcgatcggctgcttggcgatgatcagctcgag 12092278 Query: 544 cagcagcacgccgaagctgtacacgtcgctcttctccgtcagctgctgcgtcatgtagta 603 || || ||| |||||||||||||||||||||||||| ||||||||||| | ||||||||| Sbjct: 12092277 catcaccaccccgaagctgtacacgtcgctcttctcggtcagctgctgggacatgtagta 12092218 Query: 604 ctcagggtccaggta 618 ||| || |||||||| Sbjct: 12092217 ctcgggatccaggta 12092203 Score = 85.7 bits (43), Expect = 2e-13 Identities = 49/51 (96%) Strand = Plus / Minus Query: 538 ctccagcagcagcacgccgaagctgtacacgtcgctcttctccgtcagctg 588 |||||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct: 33247062 ctccagcaccaccacgccgaagctgtacacgtcgctcttctccgtcagctg 33247012 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 538 ctccagcagcagcacgccgaagctgtacacgtcgctcttctccgtcag 585 ||||||||||| ||||||||||| |||||||||||||||| ||||||| Sbjct: 4160163 ctccagcagcaccacgccgaagccgtacacgtcgctcttcgccgtcag 4160116 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 520 cttcttggccgtgatcatctccagcagcagcacgccgaagctgtacacgtcgctcttctc 579 |||| |||||||||| ||||| | |||| |||||||||||||||||||||||||| || Sbjct: 6560897 cttcatggccgtgatgatctcgacgagcacgacgccgaagctgtacacgtcgctcttgtc 6560838 Query: 580 cg 581 || Sbjct: 6560837 cg 6560836 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 542 agcagcagcacgccgaagctgtacacgtcgctcttct 578 ||||||||||||||||||||||| || |||||||||| Sbjct: 711617 agcagcagcacgccgaagctgtagacatcgctcttct 711653 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 545 agcagcacgccgaagctgtacacgtcg 571 ||||||||||||||||||||||||||| Sbjct: 6405318 agcagcacgccgaagctgtacacgtcg 6405292 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 551 acgccgaagctgtacacgtcgctctt 576 |||||||||||||||||||||||||| Sbjct: 24603166 acgccgaagctgtacacgtcgctctt 24603191 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 551 acgccgaagctgtacacgtcgctctt 576 |||||||||||||||||||||||||| Sbjct: 24564678 acgccgaagctgtacacgtcgctctt 24564703 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 554 ccgaagctgtacacgtcgctcttctc 579 |||||||||||||||||||||||||| Sbjct: 6772757 ccgaagctgtacacgtcgctcttctc 6772782 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 528 ccgtgatcatctccagcagcagcacgccgaagctgtacacgtcgctcttc 577 |||||| || ||| ||||||| ||||||||||| ||||||||| |||||| Sbjct: 1755022 ccgtgagcagctcaagcagcaccacgccgaagcagtacacgtcactcttc 1754973 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Minus Query: 578 tccgtcagctgctgcgtcatgtagtactcagggtccaggta 618 |||||||||||||||||| || ||||||| ||||| ||||| Sbjct: 1387881 tccgtcagctgctgcgtcttgaagtactccgggtcgaggta 1387841 Score = 48.1 bits (24), Expect = 0.036 Identities = 33/36 (91%) Strand = Plus / Plus Query: 538 ctccagcagcagcacgccgaagctgtacacgtcgct 573 ||||| ||||||||||||||||||||| | |||||| Sbjct: 6731551 ctccatcagcagcacgccgaagctgtagatgtcgct 6731586 Score = 46.1 bits (23), Expect = 0.14 Identities = 35/39 (89%) Strand = Plus / Minus Query: 538 ctccagcagcagcacgccgaagctgtacacgtcgctctt 576 |||||| |||| |||||| ||||||||||||||||||| Sbjct: 14041542 ctccaggagcacgacgccgtagctgtacacgtcgctctt 14041504
>gb|AC137547.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0052J20, complete sequence Length = 144969 Score = 109 bits (55), Expect = 1e-20 Identities = 115/135 (85%) Strand = Plus / Minus Query: 484 cacctcccggacgatgtaccgcccgcgctccagcggcttcttggccgtgatcatctccag 543 ||||||||||||||||||| ||| ||| | ||||| |||||| |||||| ||| || Sbjct: 116154 cacctcccggacgatgtacttccctttctcgatcggctgcttggcgatgatcagctcgag 116095 Query: 544 cagcagcacgccgaagctgtacacgtcgctcttctccgtcagctgctgcgtcatgtagta 603 || || ||| |||||||||||||||||||||||||| ||||||||||| | ||||||||| Sbjct: 116094 catcaccaccccgaagctgtacacgtcgctcttctcggtcagctgctgggacatgtagta 116035 Query: 604 ctcagggtccaggta 618 ||| || |||||||| Sbjct: 116034 ctcgggatccaggta 116020
>ref|XM_472608.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2469 Score = 99.6 bits (50), Expect = 1e-17 Identities = 77/86 (89%) Strand = Plus / Minus Query: 538 ctccagcagcagcacgccgaagctgtacacgtcgctcttctccgtcagctgctgcgtcat 597 ||||||||||| |||||||||||||||||||||||||| |||||||| |||||| | | Sbjct: 2124 ctccagcagcacgacgccgaagctgtacacgtcgctcttgtccgtcaggtgctgcagcct 2065 Query: 598 gtagtactcagggtccaggtacccca 623 ||||||||| ||||||| |||||||| Sbjct: 2064 gtagtactccgggtccatgtacccca 2039
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 99.6 bits (50), Expect = 1e-17 Identities = 77/86 (89%) Strand = Plus / Plus Query: 538 ctccagcagcagcacgccgaagctgtacacgtcgctcttctccgtcagctgctgcgtcat 597 ||||||||||| |||||||||||||||||||||||||| |||||||| |||||| | | Sbjct: 21887907 ctccagcagcacgacgccgaagctgtacacgtcgctcttgtccgtcaggtgctgcagcct 21887966 Query: 598 gtagtactcagggtccaggtacccca 623 ||||||||| ||||||| |||||||| Sbjct: 21887967 gtagtactccgggtccatgtacccca 21887992 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 538 ctccagcagcagcacgccgaagctgtacacgtcgctcttc 577 ||||||||||||||||||| |||||||||||||||||||| Sbjct: 21352296 ctccagcagcagcacgccgtagctgtacacgtcgctcttc 21352257 Score = 65.9 bits (33), Expect = 2e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 542 agcagcagcacgccgaagctgtacacgtcgctcttct 578 ||||||||||| ||||||||||||||||||||||||| Sbjct: 27032360 agcagcagcaccccgaagctgtacacgtcgctcttct 27032396 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 535 catctccagcagcagcacgccgaagctgtacacgtcgctcttc 577 |||||||||||||| ||||||||| | |||||||||||||||| Sbjct: 28236624 catctccagcagcaccacgccgaacccgtacacgtcgctcttc 28236666 Score = 60.0 bits (30), Expect = 9e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 538 ctccagcagcagcacgccgaagctgtacacgtcg 571 |||||| ||||||||||||||||||||||||||| Sbjct: 23095514 ctccaggagcagcacgccgaagctgtacacgtcg 23095547 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 554 ccgaagctgtacacgtcgctcttctccgtc 583 ||||||||||||||||||| |||||||||| Sbjct: 33454454 ccgaagctgtacacgtcgcacttctccgtc 33454425 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Minus Query: 538 ctccagcagcagcacgccgaagctgtacacgtcgctcttctccgt 582 |||||||| || ||| ||| |||||||||||||||| |||||||| Sbjct: 2025184 ctccagcaccaccaccccgtagctgtacacgtcgcttttctccgt 2025140 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Minus Query: 547 cagcacgccgaagctgtacacgtcgc 572 ||||| |||||||||||||||||||| Sbjct: 33461704 cagcatgccgaagctgtacacgtcgc 33461679 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 551 acgccgaagctgtacacgtcg 571 ||||||||||||||||||||| Sbjct: 33443400 acgccgaagctgtacacgtcg 33443380 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 551 acgccgaagctgtacacgtcg 571 ||||||||||||||||||||| Sbjct: 33433887 acgccgaagctgtacacgtcg 33433907 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Minus Query: 530 gtgatcatctccagcagcagcacgccgaagctgtacacgtc 570 ||||||| |||||| || | |||||||||||||||||||| Sbjct: 23604821 gtgatcagctccaggaggatgacgccgaagctgtacacgtc 23604781 Score = 40.1 bits (20), Expect = 8.7 Identities = 32/36 (88%) Strand = Plus / Minus Query: 538 ctccagcagcagcacgccgaagctgtacacgtcgct 573 ||||||||||| || ||| |||||||||||||||| Sbjct: 25432067 ctccagcagcacgacaccgtagctgtacacgtcgct 25432032
>emb|AL606452.2|OSJN00007 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ000114_01, complete sequence Length = 127713 Score = 99.6 bits (50), Expect = 1e-17 Identities = 77/86 (89%) Strand = Plus / Plus Query: 538 ctccagcagcagcacgccgaagctgtacacgtcgctcttctccgtcagctgctgcgtcat 597 ||||||||||| |||||||||||||||||||||||||| |||||||| |||||| | | Sbjct: 72508 ctccagcagcacgacgccgaagctgtacacgtcgctcttgtccgtcaggtgctgcagcct 72567 Query: 598 gtagtactcagggtccaggtacccca 623 ||||||||| ||||||| |||||||| Sbjct: 72568 gtagtactccgggtccatgtacccca 72593
>dbj|AK109788.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-147-D03, full insert sequence Length = 2846 Score = 99.6 bits (50), Expect = 1e-17 Identities = 77/86 (89%) Strand = Plus / Minus Query: 538 ctccagcagcagcacgccgaagctgtacacgtcgctcttctccgtcagctgctgcgtcat 597 ||||||||||| |||||||||||||||||||||||||| |||||||| |||||| | | Sbjct: 2221 ctccagcagcacgacgccgaagctgtacacgtcgctcttgtccgtcaggtgctgcagcct 2162 Query: 598 gtagtactcagggtccaggtacccca 623 ||||||||| ||||||| |||||||| Sbjct: 2161 gtagtactccgggtccatgtacccca 2136
>dbj|AK104711.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-F07, full insert sequence Length = 1259 Score = 93.7 bits (47), Expect = 7e-16 Identities = 74/83 (89%) Strand = Plus / Minus Query: 554 ccgaagctgtacacgtcgctcttctccgtcagctgctgcgtcatgtagtactcagggtcc 613 |||||||||||||| ||||||||| | || |||||||| |||||||||||||| |||||| Sbjct: 528 ccgaagctgtacacatcgctcttcgctgtgagctgctgtgtcatgtagtactccgggtcc 469 Query: 614 aggtaccccattgtgcccttgac 636 ||||| |||| ||| |||||||| Sbjct: 468 aggtatcccagtgttcccttgac 446 Score = 44.1 bits (22), Expect = 0.56 Identities = 31/34 (91%) Strand = Plus / Minus Query: 469 gtccagtgccgccaccacctcccggacgatgtac 502 ||||||||||| | ||||||||||||||||||| Sbjct: 613 gtccagtgccgtcttcacctcccggacgatgtac 580
>dbj|AK070624.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062J22, full insert sequence Length = 3313 Score = 93.7 bits (47), Expect = 7e-16 Identities = 74/83 (89%) Strand = Plus / Minus Query: 554 ccgaagctgtacacgtcgctcttctccgtcagctgctgcgtcatgtagtactcagggtcc 613 |||||||||||||| ||||||||| | || |||||||| |||||||||||||| |||||| Sbjct: 2570 ccgaagctgtacacatcgctcttcgctgtgagctgctgtgtcatgtagtactccgggtcc 2511 Query: 614 aggtaccccattgtgcccttgac 636 ||||| |||| ||| |||||||| Sbjct: 2510 aggtatcccagtgttcccttgac 2488 Score = 44.1 bits (22), Expect = 0.56 Identities = 31/34 (91%) Strand = Plus / Minus Query: 469 gtccagtgccgccaccacctcccggacgatgtac 502 ||||||||||| | ||||||||||||||||||| Sbjct: 2655 gtccagtgccgtcttcacctcccggacgatgtac 2622
>ref|XM_550622.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2265 Score = 91.7 bits (46), Expect = 3e-15 Identities = 55/58 (94%) Strand = Plus / Minus Query: 530 gtgatcatctccagcagcagcacgccgaagctgtacacgtcgctcttctccgtcagct 587 ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 1874 gtgatcagctccagcagcacgacgccgaagctgtacacgtcgctcttctccgtcagct 1817
>gb|AC123524.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0052C03, complete sequence Length = 157178 Score = 91.7 bits (46), Expect = 3e-15 Identities = 76/86 (88%) Strand = Plus / Plus Query: 538 ctccagcagcagcacgccgaagctgtacacgtcgctcttctccgtcagctgctgcgtcat 597 |||||| |||| ||| ||||||||||||||||||||||| |||||||| |||||| || Sbjct: 88728 ctccaggagcaccaccccgaagctgtacacgtcgctcttgtccgtcaggtgctgcatccg 88787 Query: 598 gtagtactcagggtccaggtacccca 623 ||||||||| ||||||| |||||||| Sbjct: 88788 gtagtactccgggtccatgtacccca 88813
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 91.7 bits (46), Expect = 3e-15 Identities = 76/86 (88%) Strand = Plus / Plus Query: 538 ctccagcagcagcacgccgaagctgtacacgtcgctcttctccgtcagctgctgcgtcat 597 |||||| |||| ||| ||||||||||||||||||||||| |||||||| |||||| || Sbjct: 6305450 ctccaggagcaccaccccgaagctgtacacgtcgctcttgtccgtcaggtgctgcatccg 6305509 Query: 598 gtagtactcagggtccaggtacccca 623 ||||||||| ||||||| |||||||| Sbjct: 6305510 gtagtactccgggtccatgtacccca 6305535 Score = 77.8 bits (39), Expect = 4e-11 Identities = 60/67 (89%) Strand = Plus / Minus Query: 548 agcacgccgaagctgtacacgtcgctcttctccgtcagctgctgcgtcatgtagtactca 607 ||||| ||||||||||| || ||||||||||| |||| |||||| ||||||||||| ||| Sbjct: 7721238 agcacaccgaagctgtagacatcgctcttctcggtcaactgctgggtcatgtagtattca 7721179 Query: 608 gggtcca 614 ||||||| Sbjct: 7721178 gggtcca 7721172 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 538 ctccagcagcagcacgccgaagctgtacacgtcgctcttctccgtca 584 ||||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 6934343 ctccagcagcacgacgccgaagctgtacacgtccgtcttctccgtca 6934389 Score = 48.1 bits (24), Expect = 0.036 Identities = 39/44 (88%) Strand = Plus / Minus Query: 539 tccagcagcagcacgccgaagctgtacacgtcgctcttctccgt 582 |||||||||| || || || ||||||||||||||||||||||| Sbjct: 27555910 tccagcagcacgactccaaaactgtacacgtcgctcttctccgt 27555867 Score = 48.1 bits (24), Expect = 0.036 Identities = 39/44 (88%) Strand = Plus / Minus Query: 539 tccagcagcagcacgccgaagctgtacacgtcgctcttctccgt 582 ||||| |||| ||| || || ||||||||||||||||||||||| Sbjct: 27524252 tccaggagcaccactccaaaactgtacacgtcgctcttctccgt 27524209 Score = 44.1 bits (22), Expect = 0.56 Identities = 31/34 (91%) Strand = Plus / Plus Query: 538 ctccagcagcagcacgccgaagctgtacacgtcg 571 |||||||| || ||||||||||||||||||||| Sbjct: 25981485 ctccagcatcacgacgccgaagctgtacacgtcg 25981518 Score = 44.1 bits (22), Expect = 0.56 Identities = 31/34 (91%) Strand = Plus / Minus Query: 538 ctccagcagcagcacgccgaagctgtacacgtcg 571 |||||||| || ||||||||||||||| |||||| Sbjct: 14162063 ctccagcaccaccacgccgaagctgtagacgtcg 14162030 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 551 acgccgaagctgtacacgtc 570 |||||||||||||||||||| Sbjct: 26066852 acgccgaagctgtacacgtc 26066833
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 91.7 bits (46), Expect = 3e-15 Identities = 55/58 (94%) Strand = Plus / Minus Query: 530 gtgatcatctccagcagcagcacgccgaagctgtacacgtcgctcttctccgtcagct 587 ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 2231601 gtgatcagctccagcagcacgacgccgaagctgtacacgtcgctcttctccgtcagct 2231544 Score = 75.8 bits (38), Expect = 2e-10 Identities = 65/74 (87%) Strand = Plus / Plus Query: 515 agcggcttcttggccgtgatcatctccagcagcagcacgccgaagctgtacacgtcgctc 574 |||||||||||| | |||| || ||| ||||| | |||||||||||||||||||||||| Sbjct: 29334744 agcggcttcttgccggtgagcagctcgagcaggacaacgccgaagctgtacacgtcgctc 29334803 Query: 575 ttctccgtcagctg 588 |||||||| ||||| Sbjct: 29334804 ttctccgtgagctg 29334817 Score = 75.8 bits (38), Expect = 2e-10 Identities = 65/74 (87%) Strand = Plus / Plus Query: 515 agcggcttcttggccgtgatcatctccagcagcagcacgccgaagctgtacacgtcgctc 574 |||||||||||| | |||| | ||| ||||||| |||||||||||||||||||||||| Sbjct: 29275599 agcggcttcttgccggtgaggagctcgagcagcacgacgccgaagctgtacacgtcgctc 29275658 Query: 575 ttctccgtcagctg 588 |||||||| ||||| Sbjct: 29275659 ttctccgtgagctg 29275672 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 530 gtgatcatctccagcagcagcacgccgaagctgtacacgtcgc 572 ||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 4340641 gtgatcatctccattagcagcaccccgaagctgtacacgtcgc 4340599 Score = 60.0 bits (30), Expect = 9e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 533 atcatctccagcagcagcacgccgaagctgtacacgtc 570 |||||||||||||||| |||||||||||||||||||| Sbjct: 24524177 atcatctccagcagcacgacgccgaagctgtacacgtc 24524214 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 528 ccgtgatcatctccagcagcagcacgccgaagctgtacacgtcgc 572 |||||| || ||||||||||| |||||||||||||||||||||| Sbjct: 28484261 ccgtgagcagctccagcagcacgacgccgaagctgtacacgtcgc 28484305 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 548 agcacgccgaagctgtacacgtcgctcttctccgtca 584 ||||||||||||||||||||||||| |||||| |||| Sbjct: 7337039 agcacgccgaagctgtacacgtcgcacttctcggtca 7337075 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 536 atctccagcagcagcacgccgaagctgtacacgtcgctcttctc 579 |||||||| |||| ||| ||| |||||||||||||||||||||| Sbjct: 22761691 atctccaggagcaccaccccgtagctgtacacgtcgctcttctc 22761734 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 538 ctccagcagcagcacgccgaagctgtacacgtcgctcttctccgtcag 585 ||||||||| | |||||||||||||||||||||||| || ||||||| Sbjct: 5208263 ctccagcagaacgacgccgaagctgtacacgtcgctcctcgccgtcag 5208310 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 522 tcttggccgtgatcatctccagcagcagcacgccgaagctgtacacgtcgct 573 ||||| |||||| ||||||||||| || ||||||||||||| ||||||||| Sbjct: 2660832 tcttgcccgtgagcatctccagcatcacgacgccgaagctgttcacgtcgct 2660883 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 536 atctccagcagcagcacgccgaagctgtacacgtc 570 ||||| ||||||||||||||||||||| ||||||| Sbjct: 17162175 atctctagcagcagcacgccgaagctgaacacgtc 17162141 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 533 atcatctccagcagcagcacgccgaagctgtacacgtc 570 |||||||||||||||| ||||||||||| |||||||| Sbjct: 24507098 atcatctccagcagcacgacgccgaagctatacacgtc 24507061 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 545 agcagcacgccgaagctgtacacgtcgctcttctc 579 |||| ||| |||||||| ||||||||||||||||| Sbjct: 29954678 agcaccacaccgaagctatacacgtcgctcttctc 29954712 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 538 ctccagcagcagcacgccgaagctgtacacgtcgc 572 |||||||| || |||||||||||||||||||||| Sbjct: 28515207 ctccagcaacacgacgccgaagctgtacacgtcgc 28515241 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 538 ctccagcagcagcacgccgaagctgtacacgtcgc 572 |||||||| || |||||||||||||||||||||| Sbjct: 28505561 ctccagcaacacgacgccgaagctgtacacgtcgc 28505595 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Minus Query: 542 agcagcagcacgccgaagctgtacac 567 |||| ||||||||||||||||||||| Sbjct: 20176578 agcaccagcacgccgaagctgtacac 20176553 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 551 acgccgaagctgtacacgtcgc 572 |||||||||||||||||||||| Sbjct: 10313609 acgccgaagctgtacacgtcgc 10313630 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 544 cagcagcacgccgaagctgtacacgtcgctctt 576 ||||| |||||||||||| ||||||||||||| Sbjct: 29831422 cagcaccacgccgaagctccacacgtcgctctt 29831454 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 550 cacgccgaagctgtacacgtc 570 ||||||||||||||||||||| Sbjct: 4350535 cacgccgaagctgtacacgtc 4350555 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 550 cacgccgaagctgtacacgtc 570 ||||||||||||||||||||| Sbjct: 4342735 cacgccgaagctgtacacgtc 4342755
>dbj|AP000399.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, clone:P0535G04 Length = 154180 Score = 91.7 bits (46), Expect = 3e-15 Identities = 55/58 (94%) Strand = Plus / Minus Query: 530 gtgatcatctccagcagcagcacgccgaagctgtacacgtcgctcttctccgtcagct 587 ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 91058 gtgatcagctccagcagcacgacgccgaagctgtacacgtcgctcttctccgtcagct 91001
>dbj|AK103263.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033124F01, full insert sequence Length = 1686 Score = 91.7 bits (46), Expect = 3e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 530 gtgatcatctccagcagcagcacgccgaagctgtacacgtcgctcttctccgtcagct 587 ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 996 gtgatcagctccagcagcacgacgccgaagctgtacacgtcgctcttctccgtcagct 1053
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 91.7 bits (46), Expect = 3e-15 Identities = 76/86 (88%) Strand = Plus / Plus Query: 538 ctccagcagcagcacgccgaagctgtacacgtcgctcttctccgtcagctgctgcgtcat 597 |||||| |||| ||| ||||||||||||||||||||||| |||||||| |||||| || Sbjct: 6371917 ctccaggagcaccaccccgaagctgtacacgtcgctcttgtccgtcaggtgctgcatccg 6371976 Query: 598 gtagtactcagggtccaggtacccca 623 ||||||||| ||||||| |||||||| Sbjct: 6371977 gtagtactccgggtccatgtacccca 6372002 Score = 77.8 bits (39), Expect = 4e-11 Identities = 60/67 (89%) Strand = Plus / Minus Query: 548 agcacgccgaagctgtacacgtcgctcttctccgtcagctgctgcgtcatgtagtactca 607 ||||| ||||||||||| || ||||||||||| |||| |||||| ||||||||||| ||| Sbjct: 7791325 agcacaccgaagctgtagacatcgctcttctcggtcaactgctgggtcatgtagtattca 7791266 Query: 608 gggtcca 614 ||||||| Sbjct: 7791265 gggtcca 7791259 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 538 ctccagcagcagcacgccgaagctgtacacgtcgctcttctccgtca 584 ||||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 7000810 ctccagcagcacgacgccgaagctgtacacgtccgtcttctccgtca 7000856 Score = 48.1 bits (24), Expect = 0.036 Identities = 39/44 (88%) Strand = Plus / Minus Query: 539 tccagcagcagcacgccgaagctgtacacgtcgctcttctccgt 582 |||||||||| || || || ||||||||||||||||||||||| Sbjct: 27579898 tccagcagcacgactccaaaactgtacacgtcgctcttctccgt 27579855 Score = 48.1 bits (24), Expect = 0.036 Identities = 39/44 (88%) Strand = Plus / Minus Query: 539 tccagcagcagcacgccgaagctgtacacgtcgctcttctccgt 582 ||||| |||| ||| || || ||||||||||||||||||||||| Sbjct: 27548240 tccaggagcaccactccaaaactgtacacgtcgctcttctccgt 27548197 Score = 44.1 bits (22), Expect = 0.56 Identities = 31/34 (91%) Strand = Plus / Plus Query: 538 ctccagcagcagcacgccgaagctgtacacgtcg 571 |||||||| || ||||||||||||||||||||| Sbjct: 26300183 ctccagcatcacgacgccgaagctgtacacgtcg 26300216 Score = 44.1 bits (22), Expect = 0.56 Identities = 31/34 (91%) Strand = Plus / Minus Query: 538 ctccagcagcagcacgccgaagctgtacacgtcg 571 |||||||| || ||||||||||||||| |||||| Sbjct: 14244065 ctccagcaccaccacgccgaagctgtagacgtcg 14244032 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 551 acgccgaagctgtacacgtc 570 |||||||||||||||||||| Sbjct: 26385548 acgccgaagctgtacacgtc 26385529
>gb|AC109595.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1212_B02, complete sequence Length = 125650 Score = 87.7 bits (44), Expect = 4e-14 Identities = 47/48 (97%) Strand = Plus / Plus Query: 542 agcagcagcacgccgaagctgtacacgtcgctcttctccgtcagctgc 589 |||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 40290 agcaccagcacgccgaagctgtacacgtcgctcttctccgtcagctgc 40337
>dbj|AK066000.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013049L02, full insert sequence Length = 2167 Score = 87.7 bits (44), Expect = 4e-14 Identities = 47/48 (97%) Strand = Plus / Minus Query: 542 agcagcagcacgccgaagctgtacacgtcgctcttctccgtcagctgc 589 |||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1618 agcaccagcacgccgaagctgtacacgtcgctcttctccgtcagctgc 1571
>ref|XM_469978.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1308 Score = 85.7 bits (43), Expect = 2e-13 Identities = 49/51 (96%) Strand = Plus / Minus Query: 538 ctccagcagcagcacgccgaagctgtacacgtcgctcttctccgtcagctg 588 |||||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct: 1020 ctccagcaccaccacgccgaagctgtacacgtcgctcttctccgtcagctg 970
>gb|AC108906.9| Oryza sativa chromosome 3 BAC OSJNBa0087C10 genomic sequence, complete sequence Length = 144487 Score = 85.7 bits (43), Expect = 2e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 538 ctccagcagcagcacgccgaagctgtacacgtcgctcttctccgtcagctg 588 |||||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct: 88003 ctccagcaccaccacgccgaagctgtacacgtcgctcttctccgtcagctg 88053
>ref|XM_463531.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1941 Score = 81.8 bits (41), Expect = 3e-12 Identities = 53/57 (92%) Strand = Plus / Minus Query: 533 atcatctccagcagcagcacgccgaagctgtacacgtcgctcttctccgtcagctgc 589 |||| |||||||| ||||||||||||||||||||||||||||||||| || |||||| Sbjct: 1559 atcacctccagcaccagcacgccgaagctgtacacgtcgctcttctcggtgagctgc 1503
>gb|AC136525.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0585E02, complete sequence Length = 138677 Score = 81.8 bits (41), Expect = 3e-12 Identities = 59/65 (90%) Strand = Plus / Minus Query: 554 ccgaagctgtacacgtcgctcttctccgtcagctgctgcgtcatgtagtactcagggtcc 613 |||||||||||||| ||||||||| | || |||||||| |||||||||||||| |||||| Sbjct: 134940 ccgaagctgtacacatcgctcttcgctgtgagctgctgtgtcatgtagtactccgggtcc 134881 Query: 614 aggta 618 ||||| Sbjct: 134880 aggta 134876 Score = 44.1 bits (22), Expect = 0.56 Identities = 31/34 (91%) Strand = Plus / Minus Query: 469 gtccagtgccgccaccacctcccggacgatgtac 502 ||||||||||| | ||||||||||||||||||| Sbjct: 135025 gtccagtgccgtcttcacctcccggacgatgtac 134992
>gb|AC130724.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0409G01, complete sequence Length = 143263 Score = 81.8 bits (41), Expect = 3e-12 Identities = 59/65 (90%) Strand = Plus / Minus Query: 554 ccgaagctgtacacgtcgctcttctccgtcagctgctgcgtcatgtagtactcagggtcc 613 |||||||||||||| ||||||||| | || |||||||| |||||||||||||| |||||| Sbjct: 76858 ccgaagctgtacacatcgctcttcgctgtgagctgctgtgtcatgtagtactccgggtcc 76799 Query: 614 aggta 618 ||||| Sbjct: 76798 aggta 76794 Score = 44.1 bits (22), Expect = 0.56 Identities = 31/34 (91%) Strand = Plus / Minus Query: 469 gtccagtgccgccaccacctcccggacgatgtac 502 ||||||||||| | ||||||||||||||||||| Sbjct: 76943 gtccagtgccgtcttcacctcccggacgatgtac 76910
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 81.8 bits (41), Expect = 3e-12 Identities = 53/57 (92%) Strand = Plus / Minus Query: 533 atcatctccagcagcagcacgccgaagctgtacacgtcgctcttctccgtcagctgc 589 |||| |||||||| ||||||||||||||||||||||||||||||||| || |||||| Sbjct: 38313877 atcacctccagcaccagcacgccgaagctgtacacgtcgctcttctcggtgagctgc 38313821 Score = 71.9 bits (36), Expect = 2e-09 Identities = 42/44 (95%) Strand = Plus / Plus Query: 545 agcagcacgccgaagctgtacacgtcgctcttctccgtcagctg 588 |||| ||||||||||||||||||||||||||| ||||||||||| Sbjct: 1977030 agcaccacgccgaagctgtacacgtcgctcttgtccgtcagctg 1977073 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 538 ctccagcagcagcacgccgaagctgtacacgtcgctcttc 577 ||||||||||| ||||||| ||||||||||||||| |||| Sbjct: 8125676 ctccagcagcaccacgccgtagctgtacacgtcgcccttc 8125715 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 535 catctccagcagcagcacgccgaagctgtacacgtcgctcttc 577 |||||||| || || ||| |||||||||||||||||||||||| Sbjct: 42974248 catctccaccatcaccaccccgaagctgtacacgtcgctcttc 42974290 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Minus Query: 535 catctccagcagcagcacgccgaagctgtacacgtcg 571 ||||||||||||||||| ||| |||||||||||||| Sbjct: 2055897 catctccagcagcagcatcccgtagctgtacacgtcg 2055861 Score = 48.1 bits (24), Expect = 0.036 Identities = 39/44 (88%) Strand = Plus / Plus Query: 533 atcatctccagcagcagcacgccgaagctgtacacgtcgctctt 576 ||||||||||| |||| ||| || |||||||||||||| ||||| Sbjct: 22915844 atcatctccagtagcaccactccaaagctgtacacgtcactctt 22915887 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 537 tctccagcagcagcacgccgaagctgtacacgtcg 571 |||| ||||||| ||||||| |||||||||||||| Sbjct: 42519553 tctcgagcagcaccacgccgtagctgtacacgtcg 42519587 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 551 acgccgaagctgtacacgtcgctcttctccgtcag 585 ||||||| |||||||||||||||||| || ||||| Sbjct: 34862558 acgccgaggctgtacacgtcgctcttgtctgtcag 34862592 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 530 gtgatcatctccagcagcagcacgccgaagctgta 564 ||||| ||||||||||||| |||||||||||||| Sbjct: 33489221 gtgatgatctccagcagcacgacgccgaagctgta 33489187 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 536 atctccagcagcagcacgccgaagctgtacacgtc 570 ||||||||||||| | |||||||||||||||||| Sbjct: 27467831 atctccagcagcacaatgccgaagctgtacacgtc 27467865 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 554 ccgaagctgtacacgtcgctctt 576 ||||||||||||||||||||||| Sbjct: 3623575 ccgaagctgtacacgtcgctctt 3623553 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 551 acgccgaagctgtacacgtcgctctt 576 ||||||||||||||||| |||||||| Sbjct: 28476847 acgccgaagctgtacacatcgctctt 28476872 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 551 acgccgaagctgtacacgtcgctct 575 |||||||||||| |||||||||||| Sbjct: 9191928 acgccgaagctgaacacgtcgctct 9191904 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 551 acgccgaagctgtacacgtc 570 |||||||||||||||||||| Sbjct: 32991754 acgccgaagctgtacacgtc 32991735 Score = 40.1 bits (20), Expect = 8.7 Identities = 32/36 (88%) Strand = Plus / Plus Query: 535 catctccagcagcagcacgccgaagctgtacacgtc 570 ||||||||| |||| | |||||||||||||||||| Sbjct: 27411119 catctccagtagcacaatgccgaagctgtacacgtc 27411154
>dbj|AP003561.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1065E10 Length = 183580 Score = 81.8 bits (41), Expect = 3e-12 Identities = 53/57 (92%) Strand = Plus / Minus Query: 533 atcatctccagcagcagcacgccgaagctgtacacgtcgctcttctccgtcagctgc 589 |||| |||||||| ||||||||||||||||||||||||||||||||| || |||||| Sbjct: 74702 atcacctccagcaccagcacgccgaagctgtacacgtcgctcttctcggtgagctgc 74646
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 79.8 bits (40), Expect = 1e-11 Identities = 46/48 (95%) Strand = Plus / Minus Query: 535 catctccagcagcagcacgccgaagctgtacacgtcgctcttctccgt 582 ||||||||||| || ||||||||||||||||||||||||||||||||| Sbjct: 18324168 catctccagcatcaccacgccgaagctgtacacgtcgctcttctccgt 18324121 Score = 69.9 bits (35), Expect = 1e-08 Identities = 41/43 (95%) Strand = Plus / Minus Query: 535 catctccagcagcagcacgccgaagctgtacacgtcgctcttc 577 ||||||||||| |||||||||||||||||||||||||| |||| Sbjct: 15268852 catctccagcaccagcacgccgaagctgtacacgtcgcccttc 15268810 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 528 ccgtgatcatctccagcagcagcacgccgaagctgtacacgtc 570 |||||| |||||| || |||| ||||||||||||||||||||| Sbjct: 13953613 ccgtgagcatctcgaggagcaccacgccgaagctgtacacgtc 13953655 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 536 atctccagcagcagcacgccgaagctgtacacgtc 570 |||||||| |||| ||||||||||||||||||||| Sbjct: 10357679 atctccagtagcaccacgccgaagctgtacacgtc 10357645 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 554 ccgaagctgtacacgtcgctctt 576 ||||||||||||||||||||||| Sbjct: 22049543 ccgaagctgtacacgtcgctctt 22049521 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 538 ctccagcagcagcacgccgaagctgtacacgtcgc 572 ||||||||| || |||||||||||||| ||||||| Sbjct: 20551285 ctccagcaggaggacgccgaagctgtagacgtcgc 20551319 Score = 44.1 bits (22), Expect = 0.56 Identities = 37/42 (88%) Strand = Plus / Plus Query: 544 cagcagcacgccgaagctgtacacgtcgctcttctccgtcag 585 ||||| ||| |||||||| |||||||||||||| ||||||| Sbjct: 20661414 cagcaccaccccgaagctccacacgtcgctcttcaccgtcag 20661455 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 528 ccgtgatcatctccagcagcagcacgccg 556 |||||| || ||||||||||||||||||| Sbjct: 12575619 ccgtgagcagctccagcagcagcacgccg 12575591 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 553 gccgaagctgtacacgtcgc 572 |||||||||||||||||||| Sbjct: 16455188 gccgaagctgtacacgtcgc 16455207
>dbj|AP005633.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0463G11 Length = 154188 Score = 79.8 bits (40), Expect = 1e-11 Identities = 46/48 (95%) Strand = Plus / Minus Query: 535 catctccagcagcagcacgccgaagctgtacacgtcgctcttctccgt 582 ||||||||||| || ||||||||||||||||||||||||||||||||| Sbjct: 38904 catctccagcatcaccacgccgaagctgtacacgtcgctcttctccgt 38857
>gb|BT018380.1| Zea mays clone EL01N0307H04.d mRNA sequence Length = 1381 Score = 77.8 bits (39), Expect = 4e-11 Identities = 57/63 (90%) Strand = Plus / Minus Query: 517 cggcttcttggccgtgatcatctccagcagcagcacgccgaagctgtacacgtcgctctt 576 ||||||||| |||||| || |||||| |||| ||||||||||||||||||||||||||| Sbjct: 522 cggcttctttcccgtgaccagctccaggagcaccacgccgaagctgtacacgtcgctctt 463 Query: 577 ctc 579 ||| Sbjct: 462 ctc 460
>gb|AC135459.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0004P24, complete sequence Length = 137721 Score = 77.8 bits (39), Expect = 4e-11 Identities = 60/67 (89%) Strand = Plus / Plus Query: 548 agcacgccgaagctgtacacgtcgctcttctccgtcagctgctgcgtcatgtagtactca 607 ||||| ||||||||||| || ||||||||||| |||| |||||| ||||||||||| ||| Sbjct: 95717 agcacaccgaagctgtagacatcgctcttctcggtcaactgctgggtcatgtagtattca 95776 Query: 608 gggtcca 614 ||||||| Sbjct: 95777 gggtcca 95783
>emb|AL713905.6|CNS07YQ5 Oryza sativa chromosome 12, . BAC OJ1584_D02 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 131300 Score = 77.8 bits (39), Expect = 4e-11 Identities = 42/43 (97%) Strand = Plus / Plus Query: 542 agcagcagcacgccgaagctgtacacgtcgctcttctccgtca 584 ||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 8251 agcagcaccacgccgaagctgtacacgtcgctcttctccgtca 8293
>emb|AL731887.5|CNS08C8R Oryza sativa chromosome 12, . BAC OJ1559_C07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 145816 Score = 77.8 bits (39), Expect = 4e-11 Identities = 42/43 (97%) Strand = Plus / Minus Query: 542 agcagcagcacgccgaagctgtacacgtcgctcttctccgtca 584 ||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 86882 agcagcaccacgccgaagctgtacacgtcgctcttctccgtca 86840 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 545 agcagcacgccgaagctgtacacgtcgc 572 |||| ||| ||||||||||||||||||| Sbjct: 100552 agcaccaccccgaagctgtacacgtcgc 100525
>ref|XM_479146.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1816 Score = 75.8 bits (38), Expect = 2e-10 Identities = 47/50 (94%) Strand = Plus / Minus Query: 536 atctccagcagcagcacgccgaagctgtacacgtcgctcttctccgtcag 585 |||||||| |||| |||||||||||||||||||||||||||| ||||||| Sbjct: 1052 atctccaggagcaccacgccgaagctgtacacgtcgctcttcgccgtcag 1003
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 75.8 bits (38), Expect = 2e-10 Identities = 47/50 (94%) Strand = Plus / Minus Query: 536 atctccagcagcagcacgccgaagctgtacacgtcgctcttctccgtcag 585 |||||||| |||| |||||||||||||||||||||||||||| ||||||| Sbjct: 25205617 atctccaggagcaccacgccgaagctgtacacgtcgctcttcgccgtcag 25205568 Score = 63.9 bits (32), Expect = 6e-07 Identities = 35/36 (97%) Strand = Plus / Minus Query: 536 atctccagcagcagcacgccgaagctgtacacgtcg 571 ||||||||||||||||||||||||||| |||||||| Sbjct: 20995593 atctccagcagcagcacgccgaagctgaacacgtcg 20995558 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 548 agcacgccgaagctgtacacgtcgctcttctccgtca 584 |||| |||||||||||||||||||| ||||||||||| Sbjct: 2161183 agcatgccgaagctgtacacgtcgcacttctccgtca 2161219 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 549 gcacgccgaagctgtacacgtcgctcttctccgtca 584 |||||||||||||||||||||||| |||||| |||| Sbjct: 2164619 gcacgccgaagctgtacacgtcgcacttctcggtca 2164654 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 538 ctccagcagcagcacgccgaagctgtacacgtcg 571 |||||||| |||||||||||||||| |||||||| Sbjct: 21793398 ctccagcaccagcacgccgaagctgaacacgtcg 21793431 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 536 atctccagcagcagcacgccgaagctgtacacgt 569 ||||||||||||| ||| |||||||||||||||| Sbjct: 5806870 atctccagcagcaccaccccgaagctgtacacgt 5806903 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 559 gctgtacacgtcgctcttctccgtc 583 ||||||||||||||||||||||||| Sbjct: 18635122 gctgtacacgtcgctcttctccgtc 18635146 Score = 48.1 bits (24), Expect = 0.036 Identities = 27/28 (96%) Strand = Plus / Plus Query: 545 agcagcacgccgaagctgtacacgtcgc 572 |||||||||||| ||||||||||||||| Sbjct: 24294902 agcagcacgccgtagctgtacacgtcgc 24294929 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 542 agcagcagcacgccgaagctgtacacgtcgctctt 576 ||||||| |||||||||||||| ||||||||||| Sbjct: 29127337 agcagcacgacgccgaagctgtagacgtcgctctt 29127303 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Minus Query: 535 catctccagcagcagcacgccgaagctgtacacgtcg 571 |||||||||||||| | |||||||||||| |||||| Sbjct: 22883397 catctccagcagcacgatgccgaagctgtagacgtcg 22883361 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 554 ccgaagctgtacacgtcgctcttc 577 ||||||||||||||||| |||||| Sbjct: 25468710 ccgaagctgtacacgtcactcttc 25468687 Score = 40.1 bits (20), Expect = 8.7 Identities = 32/36 (88%) Strand = Plus / Plus Query: 536 atctccagcagcagcacgccgaagctgtacacgtcg 571 |||||||||| || |||||||||||| |||||||| Sbjct: 21080343 atctccagcaccatgacgccgaagctgaacacgtcg 21080378
>gb|DQ013359.1| Triticum aestivum wall-associated kinase 3 (WAK3) gene, complete cds Length = 5331 Score = 75.8 bits (38), Expect = 2e-10 Identities = 91/106 (85%), Gaps = 2/106 (1%) Strand = Plus / Minus Query: 528 ccgtgatcatctccagcagcagcacgccgaagctgtacacgtcgctcttctccgtcagct 587 ||||||||| |||||| |||| || ||||||||||| |||||||||||||| ||||||| Sbjct: 4744 ccgtgatcagctccagaagcacgaccccgaagctgtagacgtcgctcttctctgtcagct 4685 Query: 588 gctgcgtcatgta-gtactcagggtccaggtaccccattgtgccct 632 || || || || | |||||||||||||||||| |||| ||||||| Sbjct: 4684 gccgc-tcctgcaggtactcagggtccaggtaacccagggtgccct 4640
>dbj|AP003621.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0621D05 Length = 180250 Score = 75.8 bits (38), Expect = 2e-10 Identities = 65/74 (87%) Strand = Plus / Plus Query: 515 agcggcttcttggccgtgatcatctccagcagcagcacgccgaagctgtacacgtcgctc 574 |||||||||||| | |||| || ||| ||||| | |||||||||||||||||||||||| Sbjct: 45625 agcggcttcttgccggtgagcagctcgagcaggacaacgccgaagctgtacacgtcgctc 45684 Query: 575 ttctccgtcagctg 588 |||||||| ||||| Sbjct: 45685 ttctccgtgagctg 45698
>dbj|AP003761.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0018H04 Length = 142053 Score = 75.8 bits (38), Expect = 2e-10 Identities = 65/74 (87%) Strand = Plus / Plus Query: 515 agcggcttcttggccgtgatcatctccagcagcagcacgccgaagctgtacacgtcgctc 574 |||||||||||| | |||| || ||| ||||| | |||||||||||||||||||||||| Sbjct: 97542 agcggcttcttgccggtgagcagctcgagcaggacaacgccgaagctgtacacgtcgctc 97601 Query: 575 ttctccgtcagctg 588 |||||||| ||||| Sbjct: 97602 ttctccgtgagctg 97615 Score = 75.8 bits (38), Expect = 2e-10 Identities = 65/74 (87%) Strand = Plus / Plus Query: 515 agcggcttcttggccgtgatcatctccagcagcagcacgccgaagctgtacacgtcgctc 574 |||||||||||| | |||| | ||| ||||||| |||||||||||||||||||||||| Sbjct: 38397 agcggcttcttgccggtgaggagctcgagcagcacgacgccgaagctgtacacgtcgctc 38456 Query: 575 ttctccgtcagctg 588 |||||||| ||||| Sbjct: 38457 ttctccgtgagctg 38470
>dbj|AP005198.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0616D06 Length = 153800 Score = 75.8 bits (38), Expect = 2e-10 Identities = 47/50 (94%) Strand = Plus / Minus Query: 536 atctccagcagcagcacgccgaagctgtacacgtcgctcttctccgtcag 585 |||||||| |||| |||||||||||||||||||||||||||| ||||||| Sbjct: 22288 atctccaggagcaccacgccgaagctgtacacgtcgctcttcgccgtcag 22239
>dbj|AK071281.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023086E05, full insert sequence Length = 1817 Score = 75.8 bits (38), Expect = 2e-10 Identities = 47/50 (94%) Strand = Plus / Minus Query: 536 atctccagcagcagcacgccgaagctgtacacgtcgctcttctccgtcag 585 |||||||| |||| |||||||||||||||||||||||||||| ||||||| Sbjct: 1053 atctccaggagcaccacgccgaagctgtacacgtcgctcttcgccgtcag 1004
>ref|XM_482082.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3262 Score = 73.8 bits (37), Expect = 6e-10 Identities = 43/45 (95%) Strand = Plus / Minus Query: 538 ctccagcagcagcacgccgaagctgtacacgtcgctcttctccgt 582 |||||||| || ||||||||||||||||||||||||||||||||| Sbjct: 2691 ctccagcatcaccacgccgaagctgtacacgtcgctcttctccgt 2647
>ref|XM_467048.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1328 Score = 73.8 bits (37), Expect = 6e-10 Identities = 37/37 (100%) Strand = Plus / Minus Query: 542 agcagcagcacgccgaagctgtacacgtcgctcttct 578 ||||||||||||||||||||||||||||||||||||| Sbjct: 814 agcagcagcacgccgaagctgtacacgtcgctcttct 778
>gb|AY224423.1| Oryza sativa (japonica cultivar-group) isolate 20130 putative receptor protein kinase mRNA, complete cds Length = 594 Score = 73.8 bits (37), Expect = 6e-10 Identities = 37/37 (100%) Strand = Plus / Minus Query: 542 agcagcagcacgccgaagctgtacacgtcgctcttct 578 ||||||||||||||||||||||||||||||||||||| Sbjct: 302 agcagcagcacgccgaagctgtacacgtcgctcttct 266
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 73.8 bits (37), Expect = 6e-10 Identities = 43/45 (95%) Strand = Plus / Plus Query: 538 ctccagcagcagcacgccgaagctgtacacgtcgctcttctccgt 582 |||||||| || ||||||||||||||||||||||||||||||||| Sbjct: 17643888 ctccagcatcaccacgccgaagctgtacacgtcgctcttctccgt 17643932 Score = 63.9 bits (32), Expect = 6e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 536 atctccagcagcagcacgccgaagctgtacacgtcgctcttctc 579 |||||||||| | |||||||||||||||||||||||||||||| Sbjct: 24375103 atctccagcacaaccacgccgaagctgtacacgtcgctcttctc 24375060 Score = 61.9 bits (31), Expect = 2e-06 Identities = 67/79 (84%) Strand = Plus / Minus Query: 545 agcagcacgccgaagctgtacacgtcgctcttctccgtcagctgctgcgtcatgtagtac 604 |||| ||||||||||||||||||||||||| || |||||||| |||| | ||||||| Sbjct: 492735 agcaccacgccgaagctgtacacgtcgctccgctgcgtcagctcctgcagccggtagtac 492676 Query: 605 tcagggtccaggtacccca 623 || ||||| | |||||||| Sbjct: 492675 tccgggtcgatgtacccca 492657 Score = 60.0 bits (30), Expect = 9e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 542 agcagcagcacgccgaagctgtacacgtcg 571 |||||||||||||||||||||||||||||| Sbjct: 20559565 agcagcagcacgccgaagctgtacacgtcg 20559594 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Plus Query: 551 acgccgaagctgtacacgtcgctc 574 |||||||||||||||||||||||| Sbjct: 17551663 acgccgaagctgtacacgtcgctc 17551686 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 555 cgaagctgtacacgtcgctctt 576 |||||||||||||||||||||| Sbjct: 16912128 cgaagctgtacacgtcgctctt 16912149 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Minus Query: 554 ccgaagctgtacacgtcgctcttctc 579 |||||||||||||| ||||||||||| Sbjct: 2767683 ccgaagctgtacacatcgctcttctc 2767658 Score = 40.1 bits (20), Expect = 8.7 Identities = 44/52 (84%) Strand = Plus / Plus Query: 513 ccagcggcttcttggccgtgatcatctccagcagcagcacgccgaagctgta 564 |||| ||||||||| | ||||||| ||| | ||||| |||||||||||||| Sbjct: 10649679 ccagtggcttcttgccagtgatcagctcgaacagcacgacgccgaagctgta 10649730
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 73.8 bits (37), Expect = 6e-10 Identities = 37/37 (100%) Strand = Plus / Plus Query: 542 agcagcagcacgccgaagctgtacacgtcgctcttct 578 ||||||||||||||||||||||||||||||||||||| Sbjct: 26109444 agcagcagcacgccgaagctgtacacgtcgctcttct 26109480 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 538 ctccagcagcagcacgccgaagctgtacacgtcgctcttctccgtcag 585 ||||||||||| ||| |||||||||||||||||||||||| ||||||| Sbjct: 32934730 ctccagcagcaccaccccgaagctgtacacgtcgctcttcgccgtcag 32934777 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 538 ctccagcagcagcacgccgaagctgtacacgtcgctctt 576 ||||||||||| |||||||||||||||||||||||||| Sbjct: 24881237 ctccagcagcacgacgccgaagctgtacacgtcgctctt 24881275 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 538 ctccagcagcagcacgccgaagctgtacacgtcgctcttc 577 ||||||||||| |||||||||| |||||||||||||||| Sbjct: 27234148 ctccagcagcacgacgccgaagccgtacacgtcgctcttc 27234187 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 536 atctccagcagcagcacgccgaagctgtacacgtcgctc 574 |||||||||||||||||||||||| ||| ||||||||| Sbjct: 35282299 atctccagcagcagcacgccgaaggagtagacgtcgctc 35282337 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 538 ctccagcagcagcacgccgaagctgtacacgtcg 571 |||||| || |||||||||||||||||||||||| Sbjct: 35724927 ctccaggaggagcacgccgaagctgtacacgtcg 35724960 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 554 ccgaagctgtacacgtcgctcttctc 579 |||||||||||||||||||||||||| Sbjct: 2817290 ccgaagctgtacacgtcgctcttctc 2817315 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 551 acgccgaagctgtacacgtcgctcttctccgtcag 585 ||||||||||||||||| || ||||| |||||||| Sbjct: 24890651 acgccgaagctgtacacatcactcttatccgtcag 24890685 Score = 46.1 bits (23), Expect = 0.14 Identities = 38/43 (88%) Strand = Plus / Minus Query: 541 cagcagcagcacgccgaagctgtacacgtcgctcttctccgtc 583 ||||| || ||| ||||||||||||||||||| ||| |||||| Sbjct: 1952847 cagcatcaccaccccgaagctgtacacgtcgcccttgtccgtc 1952805 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 551 acgccgaagctgtacacgtcgc 572 |||||||||||||||||||||| Sbjct: 5260298 acgccgaagctgtacacgtcgc 5260319 Score = 44.1 bits (22), Expect = 0.56 Identities = 28/30 (93%) Strand = Plus / Plus Query: 542 agcagcagcacgccgaagctgtacacgtcg 571 ||||| ||||||||||||||||| |||||| Sbjct: 404777 agcagaagcacgccgaagctgtagacgtcg 404806 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 547 cagcacgccgaagctgtacacgtcgctct 575 ||||||||| |||||||||||||| |||| Sbjct: 7975558 cagcacgccaaagctgtacacgtcactct 7975586 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 538 ctccagcagcagcacgccgaagctgtacacgtcgctcttct 578 ||||| ||||| ||||||| |||||||| ||||||||||| Sbjct: 637525 ctccatcagcaccacgccgtagctgtacgtgtcgctcttct 637565 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 394 cccgcccagcgacgacggcg 413 |||||||||||||||||||| Sbjct: 33588538 cccgcccagcgacgacggcg 33588519 Score = 40.1 bits (20), Expect = 8.7 Identities = 32/36 (88%) Strand = Plus / Plus Query: 536 atctccagcagcagcacgccgaagctgtacacgtcg 571 ||||||||||| | ||||| ||||||||||||||| Sbjct: 7153756 atctccagcaggacgacgccaaagctgtacacgtcg 7153791
>dbj|AP004868.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0048B08 Length = 146874 Score = 73.8 bits (37), Expect = 6e-10 Identities = 37/37 (100%) Strand = Plus / Plus Query: 542 agcagcagcacgccgaagctgtacacgtcgctcttct 578 ||||||||||||||||||||||||||||||||||||| Sbjct: 6271 agcagcagcacgccgaagctgtacacgtcgctcttct 6307
>dbj|AP004839.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0519A12 Length = 156676 Score = 73.8 bits (37), Expect = 6e-10 Identities = 37/37 (100%) Strand = Plus / Plus Query: 542 agcagcagcacgccgaagctgtacacgtcgctcttct 578 ||||||||||||||||||||||||||||||||||||| Sbjct: 116890 agcagcagcacgccgaagctgtacacgtcgctcttct 116926
>dbj|AP004397.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0436B06 Length = 148947 Score = 73.8 bits (37), Expect = 6e-10 Identities = 43/45 (95%) Strand = Plus / Plus Query: 538 ctccagcagcagcacgccgaagctgtacacgtcgctcttctccgt 582 |||||||| || ||||||||||||||||||||||||||||||||| Sbjct: 120538 ctccagcatcaccacgccgaagctgtacacgtcgctcttctccgt 120582 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Plus Query: 551 acgccgaagctgtacacgtcgctc 574 |||||||||||||||||||||||| Sbjct: 28313 acgccgaagctgtacacgtcgctc 28336
>dbj|AP003962.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1705_C03 Length = 118339 Score = 73.8 bits (37), Expect = 6e-10 Identities = 43/45 (95%) Strand = Plus / Plus Query: 538 ctccagcagcagcacgccgaagctgtacacgtcgctcttctccgt 582 |||||||| || ||||||||||||||||||||||||||||||||| Sbjct: 29277 ctccagcatcaccacgccgaagctgtacacgtcgctcttctccgt 29321
>dbj|AK111267.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-180-F08, full insert sequence Length = 1328 Score = 73.8 bits (37), Expect = 6e-10 Identities = 37/37 (100%) Strand = Plus / Minus Query: 542 agcagcagcacgccgaagctgtacacgtcgctcttct 578 ||||||||||||||||||||||||||||||||||||| Sbjct: 814 agcagcagcacgccgaagctgtacacgtcgctcttct 778
>dbj|AK072348.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023050N03, full insert sequence Length = 3262 Score = 73.8 bits (37), Expect = 6e-10 Identities = 43/45 (95%) Strand = Plus / Minus Query: 538 ctccagcagcagcacgccgaagctgtacacgtcgctcttctccgt 582 |||||||| || ||||||||||||||||||||||||||||||||| Sbjct: 2691 ctccagcatcaccacgccgaagctgtacacgtcgctcttctccgt 2647
>ref|XM_550056.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2362 Score = 71.9 bits (36), Expect = 2e-09 Identities = 42/44 (95%) Strand = Plus / Minus Query: 545 agcagcacgccgaagctgtacacgtcgctcttctccgtcagctg 588 |||| ||||||||||||||||||||||||||| ||||||||||| Sbjct: 1755 agcaccacgccgaagctgtacacgtcgctcttgtccgtcagctg 1712
>ref|XM_470532.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1335 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 538 ctccagcagcagcacgccgaagctgtacacgtcgctcttctccgtcag 585 ||||||||||| ||||||||||| |||||||||||||||| ||||||| Sbjct: 930 ctccagcagcaccacgccgaagccgtacacgtcgctcttcgccgtcag 883
>emb|AL606458.5| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084A10, complete sequence Length = 144811 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 538 ctccagcagcagcacgccgaagctgtacacgtcgctcttc 577 ||||||||||||||||||| |||||||||||||||||||| Sbjct: 2046 ctccagcagcagcacgccgtagctgtacacgtcgctcttc 2007
>gb|AC125472.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0050H14, complete sequence Length = 142245 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 538 ctccagcagcagcacgccgaagctgtacacgtcgctcttctccgtcag 585 ||||||||||| ||||||||||| |||||||||||||||| ||||||| Sbjct: 60691 ctccagcagcaccacgccgaagccgtacacgtcgctcttcgccgtcag 60644
>dbj|AP004140.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1534_E09 Length = 126209 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 538 ctccagcagcagcacgccgaagctgtacacgtcgctcttctccgtcag 585 ||||||||||| ||| |||||||||||||||||||||||| ||||||| Sbjct: 89471 ctccagcagcaccaccccgaagctgtacacgtcgctcttcgccgtcag 89518
>dbj|AP003250.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0443D08 Length = 146670 Score = 71.9 bits (36), Expect = 2e-09 Identities = 42/44 (95%) Strand = Plus / Plus Query: 545 agcagcacgccgaagctgtacacgtcgctcttctccgtcagctg 588 |||| ||||||||||||||||||||||||||| ||||||||||| Sbjct: 39608 agcaccacgccgaagctgtacacgtcgctcttgtccgtcagctg 39651 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Minus Query: 535 catctccagcagcagcacgccgaagctgtacacgtcg 571 ||||||||||||||||| ||| |||||||||||||| Sbjct: 118475 catctccagcagcagcatcccgtagctgtacacgtcg 118439
>dbj|AK107046.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-C09, full insert sequence Length = 1820 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 538 ctccagcagcagcacgccgaagctgtacacgtcgctcttctccgtcag 585 ||||||||||| ||||||||||| |||||||||||||||| ||||||| Sbjct: 1128 ctccagcagcaccacgccgaagccgtacacgtcgctcttcgccgtcag 1081
>dbj|AK072170.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013129P20, full insert sequence Length = 2362 Score = 71.9 bits (36), Expect = 2e-09 Identities = 42/44 (95%) Strand = Plus / Minus Query: 545 agcagcacgccgaagctgtacacgtcgctcttctccgtcagctg 588 |||| ||||||||||||||||||||||||||| ||||||||||| Sbjct: 1755 agcaccacgccgaagctgtacacgtcgctcttgtccgtcagctg 1712
>dbj|AK066978.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013090P22, full insert sequence Length = 2958 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 538 ctccagcagcagcacgccgaagctgtacacgtcgctcttctccgtcag 585 ||||||||||| ||| |||||||||||||||||||||||| ||||||| Sbjct: 2193 ctccagcagcaccaccccgaagctgtacacgtcgctcttcgccgtcag 2146
>dbj|AK064161.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-103-G03, full insert sequence Length = 1803 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 538 ctccagcagcagcacgccgaagctgtacacgtcgctcttc 577 ||||||||||||||||||| |||||||||||||||||||| Sbjct: 1173 ctccagcagcagcacgccgtagctgtacacgtcgctcttc 1134
>dbj|AP005579.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1740_D06 Length = 187410 Score = 69.9 bits (35), Expect = 1e-08 Identities = 41/43 (95%) Strand = Plus / Minus Query: 535 catctccagcagcagcacgccgaagctgtacacgtcgctcttc 577 ||||||||||| |||||||||||||||||||||||||| |||| Sbjct: 162828 catctccagcaccagcacgccgaagctgtacacgtcgcccttc 162786
>dbj|AP005420.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0418B08 Length = 165909 Score = 69.9 bits (35), Expect = 1e-08 Identities = 41/43 (95%) Strand = Plus / Minus Query: 535 catctccagcagcagcacgccgaagctgtacacgtcgctcttc 577 ||||||||||| |||||||||||||||||||||||||| |||| Sbjct: 48041 catctccagcaccagcacgccgaagctgtacacgtcgcccttc 47999
>gb|AY107551.1| Zea mays PCO090593 mRNA sequence Length = 798 Score = 67.9 bits (34), Expect = 4e-08 Identities = 40/42 (95%) Strand = Plus / Minus Query: 538 ctccagcagcagcacgccgaagctgtacacgtcgctcttctc 579 ||||||||||| |||||||||||||||||| ||||||||||| Sbjct: 147 ctccagcagcaccacgccgaagctgtacacatcgctcttctc 106
>ref|XM_473357.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1086 Score = 65.9 bits (33), Expect = 2e-07 Identities = 36/37 (97%) Strand = Plus / Minus Query: 542 agcagcagcacgccgaagctgtacacgtcgctcttct 578 ||||||||||| ||||||||||||||||||||||||| Sbjct: 794 agcagcagcaccccgaagctgtacacgtcgctcttct 758
>emb|AL606587.3|OSJN00022 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0011L07, complete sequence Length = 143585 Score = 65.9 bits (33), Expect = 2e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 542 agcagcagcacgccgaagctgtacacgtcgctcttct 578 ||||||||||| ||||||||||||||||||||||||| Sbjct: 100061 agcagcagcaccccgaagctgtacacgtcgctcttct 100097
>dbj|AK066397.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013061M19, full insert sequence Length = 1494 Score = 65.9 bits (33), Expect = 2e-07 Identities = 36/37 (97%) Strand = Plus / Minus Query: 542 agcagcagcacgccgaagctgtacacgtcgctcttct 578 ||||||||||| ||||||||||||||||||||||||| Sbjct: 940 agcagcagcaccccgaagctgtacacgtcgctcttct 904
>gb|AY108633.1| Zea mays PCO100878 mRNA sequence Length = 582 Score = 65.9 bits (33), Expect = 2e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 539 tccagcagcagcacgccgaagctgtacacgtcgctcttctccgtcagct 587 ||||| || |||||||||||||||||||||||||||||| |||||||| Sbjct: 223 tccaggaggagcacgccgaagctgtacacgtcgctcttcgtcgtcagct 175
>ref|XM_483121.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3315 Score = 63.9 bits (32), Expect = 6e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 536 atctccagcagcagcacgccgaagctgtacacgtcgctcttctc 579 |||||||||| | |||||||||||||||||||||||||||||| Sbjct: 2900 atctccagcacaaccacgccgaagctgtacacgtcgctcttctc 2857
>dbj|AP003863.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1058_A12 Length = 152269 Score = 63.9 bits (32), Expect = 6e-07 Identities = 35/36 (97%) Strand = Plus / Minus Query: 536 atctccagcagcagcacgccgaagctgtacacgtcg 571 ||||||||||||||||||||||||||| |||||||| Sbjct: 38892 atctccagcagcagcacgccgaagctgaacacgtcg 38857 Score = 40.1 bits (20), Expect = 8.7 Identities = 32/36 (88%) Strand = Plus / Plus Query: 536 atctccagcagcagcacgccgaagctgtacacgtcg 571 |||||||||| || |||||||||||| |||||||| Sbjct: 123642 atctccagcaccatgacgccgaagctgaacacgtcg 123677
>dbj|AP004762.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0686H11 Length = 135273 Score = 63.9 bits (32), Expect = 6e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 536 atctccagcagcagcacgccgaagctgtacacgtcgctcttctc 579 |||||||||| | |||||||||||||||||||||||||||||| Sbjct: 115407 atctccagcacaaccacgccgaagctgtacacgtcgctcttctc 115364
>dbj|AK110461.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-166-F11, full insert sequence Length = 2096 Score = 63.9 bits (32), Expect = 6e-07 Identities = 35/36 (97%) Strand = Plus / Minus Query: 536 atctccagcagcagcacgccgaagctgtacacgtcg 571 ||||||||||||||||||||||||||| |||||||| Sbjct: 1871 atctccagcagcagcacgccgaagctgaacacgtcg 1836
>ref|XM_479726.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3092 Score = 61.9 bits (31), Expect = 2e-06 Identities = 67/79 (84%) Strand = Plus / Minus Query: 545 agcagcacgccgaagctgtacacgtcgctcttctccgtcagctgctgcgtcatgtagtac 604 |||| ||||||||||||||||||||||||| || |||||||| |||| | ||||||| Sbjct: 2155 agcaccacgccgaagctgtacacgtcgctccgctgcgtcagctcctgcagccggtagtac 2096 Query: 605 tcagggtccaggtacccca 623 || ||||| | |||||||| Sbjct: 2095 tccgggtcgatgtacccca 2077
>ref|XM_473511.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1428 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 535 catctccagcagcagcacgccgaagctgtacacgtcgctcttc 577 |||||||||||||| ||||||||| | |||||||||||||||| Sbjct: 1020 catctccagcagcaccacgccgaacccgtacacgtcgctcttc 978
>gb|AC136971.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0032K12, complete sequence Length = 166936 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 538 ctccagcagcagcacgccgaagctgtacacgtcgctcttctccgtca 584 ||||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 59601 ctccagcagcacgacgccgaagctgtacacgtccgtcttctccgtca 59647
>dbj|AP003489.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0568D10 Length = 63101 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 530 gtgatcatctccagcagcagcacgccgaagctgtacacgtcgc 572 ||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 32221 gtgatcatctccattagcagcaccccgaagctgtacacgtcgc 32179 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 550 cacgccgaagctgtacacgtc 570 ||||||||||||||||||||| Sbjct: 42115 cacgccgaagctgtacacgtc 42135 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 550 cacgccgaagctgtacacgtc 570 ||||||||||||||||||||| Sbjct: 34315 cacgccgaagctgtacacgtc 34335
>dbj|AP006523.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1215B07 Length = 165957 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 538 ctccagcagcagcacgccgaagctgtacacgtcgctctt 576 ||||||||||| |||||||||||||||||||||||||| Sbjct: 42520 ctccagcagcacgacgccgaagctgtacacgtcgctctt 42558 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 551 acgccgaagctgtacacgtcgctcttctccgtcag 585 ||||||||||||||||| || ||||| |||||||| Sbjct: 51934 acgccgaagctgtacacatcactcttatccgtcag 51968
>dbj|AP004584.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0007D08 Length = 183142 Score = 61.9 bits (31), Expect = 2e-06 Identities = 67/79 (84%) Strand = Plus / Minus Query: 545 agcagcacgccgaagctgtacacgtcgctcttctccgtcagctgctgcgtcatgtagtac 604 |||| ||||||||||||||||||||||||| || |||||||| |||| | ||||||| Sbjct: 82695 agcaccacgccgaagctgtacacgtcgctccgctgcgtcagctcctgcagccggtagtac 82636 Query: 605 tcagggtccaggtacccca 623 || ||||| | |||||||| Sbjct: 82635 tccgggtcgatgtacccca 82617
>dbj|AK119326.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-131-B01, full insert sequence Length = 932 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 530 gtgatcatctccagcagcagcacgccgaagctgtacacgtcgc 572 ||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 159 gtgatcatctccattagcagcaccccgaagctgtacacgtcgc 117
>dbj|AK111596.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013093N17, full insert sequence Length = 2516 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 538 ctccagcagcagcacgccgaagctgtacacgtcgctctt 576 ||||||||||| |||||||||||||||||||||||||| Sbjct: 1975 ctccagcagcacgacgccgaagctgtacacgtcgctctt 1937
>dbj|AK111558.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013054D24, full insert sequence Length = 3492 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 538 ctccagcagcagcacgccgaagctgtacacgtcgctcttctccgtca 584 ||||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 2977 ctccagcagcacgacgccgaagctgtacacgtccgtcttctccgtca 2931
>gb|AF205916.1|AF205916 Zea mays miniature inverted-repeat transposable element Hbr48 flanking region Length = 439 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 553 gccgaagctgtacacgtcgctcttctccgtcagctgctg 591 |||||||||||||| |||||||||||| ||||||||||| Sbjct: 256 gccgaagctgtacatgtcgctcttctcggtcagctgctg 218
>dbj|AK109954.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-159-A10, full insert sequence Length = 3092 Score = 61.9 bits (31), Expect = 2e-06 Identities = 67/79 (84%) Strand = Plus / Minus Query: 545 agcagcacgccgaagctgtacacgtcgctcttctccgtcagctgctgcgtcatgtagtac 604 |||| ||||||||||||||||||||||||| || |||||||| |||| | ||||||| Sbjct: 2156 agcaccacgccgaagctgtacacgtcgctccgctgcgtcagctcctgcagccggtagtac 2097 Query: 605 tcagggtccaggtacccca 623 || ||||| | |||||||| Sbjct: 2096 tccgggtcgatgtacccca 2078
>dbj|AK105669.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-A03, full insert sequence Length = 2627 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 538 ctccagcagcagcacgccgaagctgtacacgtcgctcttctccgtca 584 ||||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 2031 ctccagcagcacgacgccgaagctgtacacgtccgtcttctccgtca 1985
>emb|AL606628.3|OSJN00055 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0017B10, complete sequence Length = 150957 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 535 catctccagcagcagcacgccgaagctgtacacgtcgctcttc 577 |||||||||||||| ||||||||| | |||||||||||||||| Sbjct: 28932 catctccagcagcaccacgccgaacccgtacacgtcgctcttc 28974
>ref|XM_482490.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1941 Score = 60.0 bits (30), Expect = 9e-06 Identities = 30/30 (100%) Strand = Plus / Minus Query: 542 agcagcagcacgccgaagctgtacacgtcg 571 |||||||||||||||||||||||||||||| Sbjct: 1625 agcagcagcacgccgaagctgtacacgtcg 1596
>ref|NM_187607.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2115 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 520 cttcttggccgtgatcatctccagcagcagcacgccgaagctgtacacgtcgctcttctc 579 |||| |||||||||| ||||| | |||| |||||||||||||||||||||||||| || Sbjct: 1617 cttcatggccgtgatgatctcgacgagcacgacgccgaagctgtacacgtcgctcttgtc 1558 Query: 580 cg 581 || Sbjct: 1557 cg 1556
>ref|XM_472767.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2010 Score = 60.0 bits (30), Expect = 9e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 538 ctccagcagcagcacgccgaagctgtacacgtcg 571 |||||| ||||||||||||||||||||||||||| Sbjct: 1668 ctccaggagcagcacgccgaagctgtacacgtcg 1635
>gb|AC107226.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0081P02, complete sequence Length = 162425 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 520 cttcttggccgtgatcatctccagcagcagcacgccgaagctgtacacgtcgctcttctc 579 |||| |||||||||| ||||| | |||| |||||||||||||||||||||||||| || Sbjct: 104446 cttcatggccgtgatgatctcgacgagcacgacgccgaagctgtacacgtcgctcttgtc 104387 Query: 580 cg 581 || Sbjct: 104386 cg 104385
>emb|BX842605.1|OSJN00299 Oryza sativa genomic DNA, chromosome 4, BAC clone: B1358B12, complete sequence Length = 131246 Score = 60.0 bits (30), Expect = 9e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 538 ctccagcagcagcacgccgaagctgtacacgtcg 571 |||||| ||||||||||||||||||||||||||| Sbjct: 91854 ctccaggagcagcacgccgaagctgtacacgtcg 91887
>emb|AJ606035.1| Triticum aestivum partial mRNA for receptor-like kinase with LRR repeats (osjnbb0071D01.2 gene) Length = 511 Score = 60.0 bits (30), Expect = 9e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 527 gccgtgatcatctccagcagcagcacgccgaagctgtacacgtcgc 572 ||||||| |||| |||| |||||||||||||||| ||||||||||| Sbjct: 191 gccgtgagcatcgccagtagcagcacgccgaagccgtacacgtcgc 146
>dbj|AP003539.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0040H10 Length = 173301 Score = 60.0 bits (30), Expect = 9e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 533 atcatctccagcagcagcacgccgaagctgtacacgtc 570 |||||||||||||||| |||||||||||||||||||| Sbjct: 7370 atcatctccagcagcacgacgccgaagctgtacacgtc 7407
>dbj|AP003609.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0012B02 Length = 149807 Score = 60.0 bits (30), Expect = 9e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 533 atcatctccagcagcagcacgccgaagctgtacacgtc 570 |||||||||||||||| |||||||||||||||||||| Sbjct: 135650 atcatctccagcagcacgacgccgaagctgtacacgtc 135687 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 533 atcatctccagcagcagcacgccgaagctgtacacgtc 570 |||||||||||||||| ||||||||||| |||||||| Sbjct: 118571 atcatctccagcagcacgacgccgaagctatacacgtc 118534
>dbj|AP005734.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0032E15 Length = 120419 Score = 60.0 bits (30), Expect = 9e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 542 agcagcagcacgccgaagctgtacacgtcg 571 |||||||||||||||||||||||||||||| Sbjct: 63526 agcagcagcacgccgaagctgtacacgtcg 63555
>dbj|AP003898.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1663_D06 Length = 139103 Score = 60.0 bits (30), Expect = 9e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 542 agcagcagcacgccgaagctgtacacgtcg 571 |||||||||||||||||||||||||||||| Sbjct: 33937 agcagcagcacgccgaagctgtacacgtcg 33966
>dbj|AK120857.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023024D23, full insert sequence Length = 2416 Score = 60.0 bits (30), Expect = 9e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 538 ctccagcagcagcacgccgaagctgtacacgtcg 571 |||||| ||||||||||||||||||||||||||| Sbjct: 1778 ctccaggagcagcacgccgaagctgtacacgtcg 1745
>dbj|AK101690.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033059I12, full insert sequence Length = 2260 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 520 cttcttggccgtgatcatctccagcagcagcacgccgaagctgtacacgtcgctcttctc 579 |||| |||||||||| ||||| | |||| |||||||||||||||||||||||||| || Sbjct: 1625 cttcatggccgtgatgatctcgacgagcacgacgccgaagctgtacacgtcgctcttgtc 1566 Query: 580 cg 581 || Sbjct: 1565 cg 1564
>emb|AL512547.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: B0812A04, complete sequence Length = 43144 Score = 60.0 bits (30), Expect = 9e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 538 ctccagcagcagcacgccgaagctgtacacgtcg 571 |||||| ||||||||||||||||||||||||||| Sbjct: 16437 ctccaggagcagcacgccgaagctgtacacgtcg 16470
>ref|XM_476607.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1456 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 548 agcacgccgaagctgtacacgtcgctcttctccgtca 584 |||| |||||||||||||||||||| ||||||||||| Sbjct: 889 agcatgccgaagctgtacacgtcgcacttctccgtca 853
>gb|BT009067.1| Triticum aestivum clone wet1c.pk001.k17:fis, full insert mRNA sequence Length = 1021 Score = 58.0 bits (29), Expect = 4e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 538 ctccagcagcagcacgccgaagctgtacacgtcgctcttctccgtcagc 586 |||||| |||| ||| ||| |||||||||||||||||||||| |||||| Sbjct: 457 ctccagaagcaccaccccgtagctgtacacgtcgctcttctcggtcagc 409
>gb|AC134237.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0090O10, complete sequence Length = 162132 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 542 agcagcagcacgccgaagctgtacacgtcgctcttct 578 ||||||||||||||||||||||| || |||||||||| Sbjct: 7164 agcagcagcacgccgaagctgtagacatcgctcttct 7200
>gb|AC121490.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0005F16, complete sequence Length = 160053 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 542 agcagcagcacgccgaagctgtacacgtcgctcttct 578 ||||||||||||||||||||||| || |||||||||| Sbjct: 97500 agcagcagcacgccgaagctgtagacatcgctcttct 97536
>dbj|AP005457.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0532H03 Length = 166128 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 528 ccgtgatcatctccagcagcagcacgccgaagctgtacacgtcgc 572 |||||| || ||||||||||| |||||||||||||||||||||| Sbjct: 91294 ccgtgagcagctccagcagcacgacgccgaagctgtacacgtcgc 91338 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 538 ctccagcagcagcacgccgaagctgtacacgtcgc 572 |||||||| || |||||||||||||||||||||| Sbjct: 122240 ctccagcaacacgacgccgaagctgtacacgtcgc 122274 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 538 ctccagcagcagcacgccgaagctgtacacgtcgc 572 |||||||| || |||||||||||||||||||||| Sbjct: 112594 ctccagcaacacgacgccgaagctgtacacgtcgc 112628
>dbj|AP004862.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0001B11 Length = 166004 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 548 agcacgccgaagctgtacacgtcgctcttctccgtca 584 ||||||||||||||||||||||||| |||||| |||| Sbjct: 43624 agcacgccgaagctgtacacgtcgcacttctcggtca 43660
>dbj|AP004010.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1351_C05 Length = 112465 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 548 agcacgccgaagctgtacacgtcgctcttctccgtca 584 |||| |||||||||||||||||||| ||||||||||| Sbjct: 29085 agcatgccgaagctgtacacgtcgcacttctccgtca 29121 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 549 gcacgccgaagctgtacacgtcgctcttctccgtca 584 |||||||||||||||||||||||| |||||| |||| Sbjct: 32521 gcacgccgaagctgtacacgtcgcacttctcggtca 32556
>dbj|AK110293.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-163-G06, full insert sequence Length = 3272 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 528 ccgtgatcatctccagcagcagcacgccgaagctgtacacgtcgc 572 |||||| || ||||||||||| |||||||||||||||||||||| Sbjct: 2893 ccgtgagcagctccagcagcacgacgccgaagctgtacacgtcgc 2849
>dbj|AK106343.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-G11, full insert sequence Length = 1456 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 548 agcacgccgaagctgtacacgtcgctcttctccgtca 584 |||| |||||||||||||||||||| ||||||||||| Sbjct: 889 agcatgccgaagctgtacacgtcgcacttctccgtca 853
>dbj|AK104314.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-023-A08, full insert sequence Length = 1574 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 542 agcagcagcacgccgaagctgtacacgtcgctcttct 578 ||||||||||||||||||||||| || |||||||||| Sbjct: 848 agcagcagcacgccgaagctgtagacatcgctcttct 812
>dbj|AK071309.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023085P06, full insert sequence Length = 1610 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 542 agcagcagcacgccgaagctgtacacgtcgctcttct 578 ||||||||||||||||||||||| || |||||||||| Sbjct: 884 agcagcagcacgccgaagctgtagacatcgctcttct 848
>dbj|AK068992.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023002G08, full insert sequence Length = 1707 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 548 agcacgccgaagctgtacacgtcgctcttctccgtca 584 ||||||||||||||||||||||||| |||||| |||| Sbjct: 1099 agcacgccgaagctgtacacgtcgcacttctcggtca 1063
>dbj|AK058286.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-E01, full insert sequence Length = 1638 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 542 agcagcagcacgccgaagctgtacacgtcgctcttct 578 ||||||||||||||||||||||| || |||||||||| Sbjct: 850 agcagcagcacgccgaagctgtagacatcgctcttct 814
>dbj|AP003829.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1417_E01 Length = 118058 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 548 agcacgccgaagctgtacacgtcgctcttctccgtca 584 |||| |||||||||||||||||||| ||||||||||| Sbjct: 116976 agcatgccgaagctgtacacgtcgcacttctccgtca 117012
>gb|AF085167.1|AF085167 Hordeum vulgare receptor-like kinase ARK1AS gene, partial cds Length = 2849 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 535 catctccagcagcagcacgccgaagctgtacacgtcg 571 ||||||||||||||||| |||||||||||||||||| Sbjct: 2551 catctccagcagcagcatcccgaagctgtacacgtcg 2515
>ref|XM_550648.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1867 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 522 tcttggccgtgatcatctccagcagcagcacgccgaagctgtacacgtcgct 573 ||||| |||||| ||||||||||| || ||||||||||||| ||||||||| Sbjct: 1346 tcttgcccgtgagcatctccagcatcacgacgccgaagctgttcacgtcgct 1295
>ref|NM_188775.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1041 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 538 ctccagcagcagcacgccgaagctgtacacgtcgctcttc 577 ||||||||||| ||||||| ||||||||||||||| |||| Sbjct: 783 ctccagcagcaccacgccgtagctgtacacgtcgcccttc 744
>ref|XM_475858.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2739 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 545 agcagcacgccgaagctgtacacgtcgctcttctccgtcagctg 588 |||| |||||||||||||||||| |||||||| ||||| ||||| Sbjct: 2369 agcaccacgccgaagctgtacacatcgctcttgtccgtgagctg 2326
>ref|NM_197350.1| Oryza sativa (japonica cultivar-group) putative receptor protein kinase (OSJNBa0076F20.2), mRNA Length = 1706 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 551 acgccgaagctgtacacgtcgctcttct 578 |||||||||||||||||||||||||||| Sbjct: 889 acgccgaagctgtacacgtcgctcttct 862
>ref|XM_476608.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1704 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 549 gcacgccgaagctgtacacgtcgctcttctccgtca 584 |||||||||||||||||||||||| |||||| |||| Sbjct: 1097 gcacgccgaagctgtacacgtcgcacttctcggtca 1062
>gb|AC129717.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0079H23, complete sequence Length = 191765 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 545 agcagcacgccgaagctgtacacgtcgctcttctccgtcagctg 588 |||| |||||||||||||||||| |||||||| ||||| ||||| Sbjct: 21562 agcaccacgccgaagctgtacacatcgctcttgtccgtgagctg 21519
>gb|AC135925.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0560C03, complete sequence Length = 177861 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 545 agcagcacgccgaagctgtacacgtcgctcttctccgtcagctg 588 |||| |||||||||||||||||| |||||||| ||||| ||||| Sbjct: 77990 agcaccacgccgaagctgtacacatcgctcttgtccgtgagctg 77947
>gb|AC007789.1| Oryza sativa BAC OSJNBa0049B20 genomic sequence, complete sequence Length = 182756 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 538 ctccagcagcagcacgccgaagctgtacacgtcgctcttc 577 ||||||||||| ||||||| ||||||||||||||| |||| Sbjct: 89789 ctccagcagcaccacgccgtagctgtacacgtcgcccttc 89828
>dbj|AP003074.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0004G10 Length = 150379 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 538 ctccagcagcagcacgccgaagctgtacacgtcgctcttc 577 ||||||||||| ||||||| ||||||||||||||| |||| Sbjct: 122327 ctccagcagcaccacgccgtagctgtacacgtcgcccttc 122366
>gb|AC025296.10| Oryza sativa chromosome 10 BAC OSJNBa0076F20 genomic sequence, complete sequence Length = 165394 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 551 acgccgaagctgtacacgtcgctcttct 578 |||||||||||||||||||||||||||| Sbjct: 8614 acgccgaagctgtacacgtcgctcttct 8641
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 551 acgccgaagctgtacacgtcgctcttct 578 |||||||||||||||||||||||||||| Sbjct: 19380748 acgccgaagctgtacacgtcgctcttct 19380775 Score = 44.1 bits (22), Expect = 0.56 Identities = 34/38 (89%) Strand = Plus / Plus Query: 535 catctccagcagcagcacgccgaagctgtacacgtcgc 572 ||||||||||| || ||| ||||||||| ||||||||| Sbjct: 20133554 catctccagcaacaccaccccgaagctgaacacgtcgc 20133591 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 551 acgccgaagctgtacacgtcgc 572 |||||||||||||||||||||| Sbjct: 16752661 acgccgaagctgtacacgtcgc 16752682 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 395 ccgcccagcgacgacggcga 414 |||||||||||||||||||| Sbjct: 10089140 ccgcccagcgacgacggcga 10089159
>gb|AF325198.1|AF325198 Triticum aestivum LRR14 (Lrr14), TAK14 (TAK14), and LRK14 (Lrk14) genes, complete cds; and unknown gene Length = 43606 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 535 catctccagcagcagcacgccgaagctgtacacgtc 570 ||||||||||||||||| ||||||||||||||||| Sbjct: 36352 catctccagcagcagcatcccgaagctgtacacgtc 36387
>dbj|AP002865.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0034C11 Length = 139399 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 538 ctccagcagcagcacgccgaagctgtacacgtcgctcttc 577 ||||||||||| ||||||| ||||||||||||||| |||| Sbjct: 43394 ctccagcagcaccacgccgtagctgtacacgtcgcccttc 43433
>dbj|AP004858.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1725_H08 Length = 155431 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 538 ctccagcagcagcacgccgaagctgtacacgtcgctcttc 577 ||||||||||| |||||||||| |||||||||||||||| Sbjct: 130597 ctccagcagcacgacgccgaagccgtacacgtcgctcttc 130636
>dbj|AP005055.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0684A08 Length = 137841 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 538 ctccagcagcagcacgccgaagctgtacacgtcgctcttc 577 ||||||||||| |||||||||| |||||||||||||||| Sbjct: 84819 ctccagcagcacgacgccgaagccgtacacgtcgctcttc 84858
>dbj|AP004806.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0710H01 Length = 187107 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 522 tcttggccgtgatcatctccagcagcagcacgccgaagctgtacacgtcgct 573 ||||| |||||| ||||||||||| || ||||||||||||| ||||||||| Sbjct: 116173 tcttgcccgtgagcatctccagcatcacgacgccgaagctgttcacgtcgct 116224
>dbj|AP006554.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0529C07 Length = 174011 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 522 tcttggccgtgatcatctccagcagcagcacgccgaagctgtacacgtcgct 573 ||||| |||||| ||||||||||| || ||||||||||||| ||||||||| Sbjct: 72579 tcttgcccgtgagcatctccagcatcacgacgccgaagctgttcacgtcgct 72630
>dbj|AP003622.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0633E08 Length = 136471 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 536 atctccagcagcagcacgccgaagctgtacacgtcgctcttctc 579 |||||||| |||| ||| ||| |||||||||||||||||||||| Sbjct: 48642 atctccaggagcaccaccccgtagctgtacacgtcgctcttctc 48685
>dbj|AP004991.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0016O19 Length = 169120 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 538 ctccagcagcagcacgccgaagctgtacacgtcgctcttctccgtcag 585 ||||||||| | |||||||||||||||||||||||| || ||||||| Sbjct: 74985 ctccagcagaacgacgccgaagctgtacacgtcgctcctcgccgtcag 75032
>dbj|AK109679.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-145-C06, full insert sequence Length = 1950 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 522 tcttggccgtgatcatctccagcagcagcacgccgaagctgtacacgtcgct 573 ||||| |||||| ||||||||||| || ||||||||||||| ||||||||| Sbjct: 324 tcttgcccgtgagcatctccagcatcacgacgccgaagctgttcacgtcgct 375
>dbj|AK109607.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-137-F09, full insert sequence Length = 1608 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 538 ctccagcagcagcacgccgaagctgtacacgtcgctcttctccgtcag 585 ||||||||| | |||||||||||||||||||||||| || ||||||| Sbjct: 939 ctccagcagaacgacgccgaagctgtacacgtcgctcctcgccgtcag 892
>dbj|AK108649.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-148-C04, full insert sequence Length = 1707 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 536 atctccagcagcagcacgccgaagctgtacacgtcg 571 ||||||||||||| || ||||||||||||||||||| Sbjct: 1131 atctccagcagcaccatgccgaagctgtacacgtcg 1096
>dbj|AK108437.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-143-B06, full insert sequence Length = 933 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 538 ctccagcagcagcacgccgaagctgtacacgtcgctcttctccgtcag 585 ||||||||| | |||||||||||||||||||||||| || ||||||| Sbjct: 612 ctccagcagaacgacgccgaagctgtacacgtcgctcctcgccgtcag 659
>dbj|AK106925.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-B09, full insert sequence Length = 1867 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 522 tcttggccgtgatcatctccagcagcagcacgccgaagctgtacacgtcgct 573 ||||| |||||| ||||||||||| || ||||||||||||| ||||||||| Sbjct: 1346 tcttgcccgtgagcatctccagcatcacgacgccgaagctgttcacgtcgct 1295
>dbj|AK101039.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033000K11, full insert sequence Length = 3685 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 536 atctccagcagcagcacgccgaagctgtacacgtcgctcttctc 579 |||||||| |||| ||| ||| |||||||||||||||||||||| Sbjct: 3143 atctccaggagcaccaccccgtagctgtacacgtcgctcttctc 3100
>dbj|AK065614.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013026J11, full insert sequence Length = 1586 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 538 ctccagcagcagcacgccgaagctgtacacgtcgctcttc 577 ||||||||||| ||||||| ||||||||||||||| |||| Sbjct: 1071 ctccagcagcaccacgccgtagctgtacacgtcgcccttc 1032
>dbj|AK062501.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-104-A11, full insert sequence Length = 567 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 536 atctccagcagcagcacgccgaagctgtacacgtcgctcttctc 579 |||||||| |||| ||| ||| |||||||||||||||||||||| Sbjct: 415 atctccaggagcaccaccccgtagctgtacacgtcgctcttctc 458
>gb|U78762.1|TAU78762 Triticum aestivum receptor-like kinase ARK1AS (ARK1AS) gene, complete cds Length = 2744 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 535 catctccagcagcagcacgccgaagctgtacacgtc 570 ||||||||||||||||| ||||||||||||||||| Sbjct: 2187 catctccagcagcagcatcccgaagctgtacacgtc 2152
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 551 acgccgaagctgtacacgtcgctcttct 578 |||||||||||||||||||||||||||| Sbjct: 19392024 acgccgaagctgtacacgtcgctcttct 19392051 Score = 44.1 bits (22), Expect = 0.56 Identities = 34/38 (89%) Strand = Plus / Plus Query: 535 catctccagcagcagcacgccgaagctgtacacgtcgc 572 ||||||||||| || ||| ||||||||| ||||||||| Sbjct: 20144830 catctccagcaacaccaccccgaagctgaacacgtcgc 20144867 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 551 acgccgaagctgtacacgtcgc 572 |||||||||||||||||||||| Sbjct: 16761701 acgccgaagctgtacacgtcgc 16761722 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 395 ccgcccagcgacgacggcga 414 |||||||||||||||||||| Sbjct: 10095179 ccgcccagcgacgacggcga 10095198
>emb|AL732378.3|CNS08C91 Oryza sativa chromosome 12, . BAC OSJNBa0063N15 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 109222 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 536 atctccagcagcagcacgccgaagctgtacacgtcg 571 ||||||||||||| || ||||||||||||||||||| Sbjct: 88764 atctccagcagcaccatgccgaagctgtacacgtcg 88729
>emb|BX664710.2|CNS09SC0 Oryza sativa chromosome 12, . PAC P0243A04 of chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 78611 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 536 atctccagcagcagcacgccgaagctgtacacgtcg 571 ||||||||||||| || ||||||||||||||||||| Sbjct: 54144 atctccagcagcaccatgccgaagctgtacacgtcg 54179
>ref|XM_476051.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3372 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 530 gtgatcatctccagcagcagcacgccgaagctgtacacgtcgctctt 576 ||||||||||| || |||| ||| ||||||||||||||||| ||||| Sbjct: 2936 gtgatcatctcgagtagcaccacaccgaagctgtacacgtcactctt 2890
>ref|NM_124355.1| Arabidopsis thaliana ATP binding / protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase AT5G49770 mRNA, complete cds Length = 2841 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 563 tacacgtcgctcttctccgtcagctgctgcgtcatgtagtactcagg 609 ||||| |||||||||||||||| || | |||||||||||||||||| Sbjct: 2456 tacacatcgctcttctccgtcaattgattcgtcatgtagtactcagg 2410
>ref|NM_187694.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2028 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 545 agcagcacgccgaagctgtacacgtcg 571 ||||||||||||||||||||||||||| Sbjct: 1709 agcagcacgccgaagctgtacacgtcg 1683
>ref|XM_468446.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1543 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 536 atctccagcagcagcacgccgaagctgtacacgtcgctc 574 |||||||||||||||||||||||| ||| ||||||||| Sbjct: 1096 atctccagcagcagcacgccgaaggagtagacgtcgctc 1058
>ref|XM_507058.1| PREDICTED Oryza sativa (japonica cultivar-group), P0474F11.23 mRNA Length = 1630 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 536 atctccagcagcagcacgccgaagctgtacacgtcgctc 574 |||||||||||||||||||||||| ||| ||||||||| Sbjct: 1118 atctccagcagcagcacgccgaaggagtagacgtcgctc 1080
>ref|NM_189481.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1404 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 535 catctccagcagcagcacgccgaagctgtacacgtcgctcttc 577 |||||||| || || ||| |||||||||||||||||||||||| Sbjct: 1017 catctccaccatcaccaccccgaagctgtacacgtcgctcttc 975
>gb|AF474072.1| Hordeum vulgare sp. vulgare cultivar Morex BAC clone 773k14, complete sequence Length = 113510 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 531 tgatcatctccagcagcagcacgccgaagctgtac 565 |||| |||||||||| ||||||||||||||||||| Sbjct: 2462 tgatgatctccagcaccagcacgccgaagctgtac 2496
>gb|AC087553.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0685E10, complete sequence Length = 156772 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 530 gtgatcatctccagcagcagcacgccgaagctgtacacgtcgctctt 576 ||||||||||| || |||| ||| ||||||||||||||||| ||||| Sbjct: 3413 gtgatcatctcgagtagcaccacaccgaagctgtacacgtcactctt 3367
>gb|AC165175.2| Zea mays clone ZMMBBb-136N21, complete sequence Length = 129274 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 538 ctccagcagcagcacgccgaagctgtacacgtcgctctt 576 |||||| |||| |||||||||||||||||||||||||| Sbjct: 36856 ctccaggagcacgacgccgaagctgtacacgtcgctctt 36894
>gb|AC105364.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1743A09, complete sequence Length = 146568 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 545 agcagcacgccgaagctgtacacgtcg 571 ||||||||||||||||||||||||||| Sbjct: 86231 agcagcacgccgaagctgtacacgtcg 86205
>gb|AC084817.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0419C04, complete sequence Length = 136713 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 530 gtgatcatctccagcagcagcacgccgaagctgtacacgtcgctctt 576 ||||||||||| || |||| ||| ||||||||||||||||| ||||| Sbjct: 91628 gtgatcatctcgagtagcaccacaccgaagctgtacacgtcactctt 91582
>dbj|AP003298.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0698H10 Length = 153449 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 535 catctccagcagcagcacgccgaagctgtacacgtcgctcttc 577 |||||||| || || ||| |||||||||||||||||||||||| Sbjct: 75127 catctccaccatcaccaccccgaagctgtacacgtcgctcttc 75169
>dbj|AP003277.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0518C01 Length = 173555 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 535 catctccagcagcagcacgccgaagctgtacacgtcgctcttc 577 |||||||| || || ||| |||||||||||||||||||||||| Sbjct: 167982 catctccaccatcaccaccccgaagctgtacacgtcgctcttc 168024
>dbj|AP005091.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1104_G11 Length = 140093 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 536 atctccagcagcagcacgccgaagctgtacacgtc 570 |||||||| |||| ||||||||||||||||||||| Sbjct: 65384 atctccagtagcaccacgccgaagctgtacacgtc 65350
>dbj|AP004020.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1119_A01 Length = 108727 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 536 atctccagcagcagcacgccgaagctgtacacgtcgctc 574 |||||||||||||||||||||||| ||| ||||||||| Sbjct: 32633 atctccagcagcagcacgccgaaggagtagacgtcgctc 32671
>dbj|AP004688.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0036C11 Length = 137995 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 536 atctccagcagcagcacgccgaagctgtacacgtc 570 ||||| ||||||||||||||||||||| ||||||| Sbjct: 10902 atctctagcagcagcacgccgaagctgaacacgtc 10868
>dbj|AP005421.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0435D08 Length = 148912 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 528 ccgtgatcatctccagcagcagcacgccgaagctgtacacgtc 570 |||||| |||||| || |||| ||||||||||||||||||||| Sbjct: 107290 ccgtgagcatctcgaggagcaccacgccgaagctgtacacgtc 107332
>dbj|AP005321.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0650H04 Length = 134533 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 528 ccgtgatcatctccagcagcagcacgccgaagctgtacacgtc 570 |||||| |||||| || |||| ||||||||||||||||||||| Sbjct: 56087 ccgtgagcatctcgaggagcaccacgccgaagctgtacacgtc 56129
>dbj|AP004878.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0474F11 Length = 139544 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 536 atctccagcagcagcacgccgaagctgtacacgtcgctc 574 |||||||||||||||||||||||| ||| ||||||||| Sbjct: 94349 atctccagcagcagcacgccgaaggagtagacgtcgctc 94387
>dbj|AB025613.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K2I5 Length = 71807 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 563 tacacgtcgctcttctccgtcagctgctgcgtcatgtagtactcagg 609 ||||| |||||||||||||||| || | |||||||||||||||||| Sbjct: 63887 tacacatcgctcttctccgtcaattgattcgtcatgtagtactcagg 63841 Score = 44.1 bits (22), Expect = 0.56 Identities = 40/46 (86%) Strand = Plus / Minus Query: 569 tcgctcttctccgtcagctgctgcgtcatgtagtactcagggtcca 614 ||||||||||| |||| || | |||||||||||||||||| |||| Sbjct: 69676 tcgctcttctctgtcaattgattcgtcatgtagtactcaggatcca 69631 Score = 40.1 bits (20), Expect = 8.7 Identities = 38/44 (86%) Strand = Plus / Minus Query: 563 tacacgtcgctcttctccgtcagctgctgcgtcatgtagtactc 606 ||||| |||||||||||||| | || | ||||||||||||||| Sbjct: 57642 tacacatcgctcttctccgttaattgattcgtcatgtagtactc 57599
>dbj|AK112048.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-D12, full insert sequence Length = 1630 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 536 atctccagcagcagcacgccgaagctgtacacgtcgctc 574 |||||||||||||||||||||||| ||| ||||||||| Sbjct: 1118 atctccagcagcagcacgccgaaggagtagacgtcgctc 1080
>dbj|AK105608.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-B02, full insert sequence Length = 1743 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 536 atctccagcagcagcacgccgaagctgtacacgtc 570 ||||| ||||||||||||||||||||| ||||||| Sbjct: 1060 atctctagcagcagcacgccgaagctgaacacgtc 1026
>dbj|AK099147.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023055C13, full insert sequence Length = 1545 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 536 atctccagcagcagcacgccgaagctgtacacgtcgctc 574 |||||||||||||||||||||||| ||| ||||||||| Sbjct: 1097 atctccagcagcagcacgccgaaggagtagacgtcgctc 1059
>dbj|AK070591.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023055M11, full insert sequence Length = 1566 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 545 agcagcacgccgaagctgtacacgtcg 571 ||||||||||||||||||||||||||| Sbjct: 890 agcagcacgccgaagctgtacacgtcg 864
>dbj|AK069969.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023038O14, full insert sequence Length = 1691 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 536 atctccagcagcagcacgccgaagctgtacacgtc 570 ||||| ||||||||||||||||||||| ||||||| Sbjct: 1002 atctctagcagcagcacgccgaagctgaacacgtc 968
>dbj|AK069546.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023023F24, full insert sequence Length = 1841 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 535 catctccagcagcagcacgccgaagctgtacacgtcgctcttc 577 |||||||| || || ||| |||||||||||||||||||||||| Sbjct: 1188 catctccaccatcaccaccccgaagctgtacacgtcgctcttc 1146
>dbj|AK065199.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002E20, full insert sequence Length = 2451 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 545 agcagcacgccgaagctgtacacgtcg 571 ||||||||||||||||||||||||||| Sbjct: 1840 agcagcacgccgaagctgtacacgtcg 1814
>dbj|AK061811.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-A12, full insert sequence Length = 1123 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 545 agcagcacgccgaagctgtacacgtcg 571 ||||||||||||||||||||||||||| Sbjct: 515 agcagcacgccgaagctgtacacgtcg 489
>ref|NM_112860.1| Arabidopsis thaliana ATP binding / protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase AT3G19700 mRNA, complete cds Length = 3460 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 554 ccgaagctgtacacgtcgctcttctc 579 |||||||||||||||||||||||||| Sbjct: 2639 ccgaagctgtacacgtcgctcttctc 2614
>ref|NM_124356.1| Arabidopsis thaliana ATP binding / kinase/ protein serine/threonine kinase AT5G49780 mRNA, complete cds Length = 3021 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Minus Query: 569 tcgctcttctccgtcagctgctgcgtcatgtagtactcagggtccaggtaccccattgtg 628 ||||||||||| |||| || | |||||||||||||||||| |||| ||| ||||| || Sbjct: 2597 tcgctcttctctgtcaattgattcgtcatgtagtactcaggatccaagtagcccatagtt 2538 Query: 629 cccttgactt 638 ||||| |||| Sbjct: 2537 cccttcactt 2528
>ref|XM_475974.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2100 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 554 ccgaagctgtacacgtcgctcttctccgtc 583 ||||||||||||||||||| |||||||||| Sbjct: 1262 ccgaagctgtacacgtcgcccttctccgtc 1233
>ref|XM_474170.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1236 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 554 ccgaagctgtacacgtcgctcttctccgtc 583 ||||||||||||||||||| |||||||||| Sbjct: 803 ccgaagctgtacacgtcgcacttctccgtc 774
>ref|XM_470602.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3006 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 554 ccgaagctgtacacgtcgctcttctc 579 |||||||||||||||||||||||||| Sbjct: 2618 ccgaagctgtacacgtcgctcttctc 2593
>ref|XM_468538.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1865 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 538 ctccagcagcagcacgccgaagctgtacacgtcg 571 |||||| || |||||||||||||||||||||||| Sbjct: 1144 ctccaggaggagcacgccgaagctgtacacgtcg 1111
>ref|XM_470172.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1173 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 528 ccgtgatcatctccagcagcagcacgccgaagctgtacacgtcgctcttc 577 |||||| || ||| ||||||| ||||||||||| ||||||||| |||||| Sbjct: 832 ccgtgagcagctcaagcagcaccacgccgaagcagtacacgtcactcttc 783
>ref|XM_478647.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2583 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 538 ctccagcagcagcacgccgaagctgtacacgtcg 571 |||||||| |||||||||||||||| |||||||| Sbjct: 2193 ctccagcaccagcacgccgaagctgaacacgtcg 2160
>ref|XM_477081.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3138 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 536 atctccagcagcagcacgccgaagctgtacacgt 569 ||||||||||||| ||| |||||||||||||||| Sbjct: 2882 atctccagcagcaccaccccgaagctgtacacgt 2849
>gb|AC145383.3| Oryza sativa chromosome 3 BAC OSJNBa0038E17 genomic sequence, complete sequence Length = 141691 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 551 acgccgaagctgtacacgtcgctctt 576 |||||||||||||||||||||||||| Sbjct: 61883 acgccgaagctgtacacgtcgctctt 61908 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 551 acgccgaagctgtacacgtcgctctt 576 |||||||||||||||||||||||||| Sbjct: 23395 acgccgaagctgtacacgtcgctctt 23420
>gb|AC137608.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0009C07, complete sequence Length = 148731 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 554 ccgaagctgtacacgtcgctcttctccgtc 583 ||||||||||||||||||| |||||||||| Sbjct: 89913 ccgaagctgtacacgtcgcccttctccgtc 89884
>gb|DQ177499.1| Triticum aestivum wall-associated kinase-like 2 (WAKL2) mRNA, complete cds, alternatively spliced Length = 2375 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 551 acgccgaagctgtacacgtcgctcttctccgtcagctg 588 |||||||||||||| |||||||||||||| || ||||| Sbjct: 1987 acgccgaagctgtaaacgtcgctcttctcggtgagctg 1950
>emb|AL606446.1|OSJN00016 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0022F16, complete sequence Length = 119535 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 554 ccgaagctgtacacgtcgctcttctccgtc 583 ||||||||||||||||||| |||||||||| Sbjct: 100333 ccgaagctgtacacgtcgcacttctccgtc 100304 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Minus Query: 547 cagcacgccgaagctgtacacgtcgc 572 ||||| |||||||||||||||||||| Sbjct: 107583 cagcatgccgaagctgtacacgtcgc 107558 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 551 acgccgaagctgtacacgtcg 571 ||||||||||||||||||||| Sbjct: 89279 acgccgaagctgtacacgtcg 89259 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 551 acgccgaagctgtacacgtcg 571 ||||||||||||||||||||| Sbjct: 79766 acgccgaagctgtacacgtcg 79786
>emb|AL732379.5|CNS08C92 Oryza sativa chromosome 3, . BAC OSJNBa0025B02 of library OSJNBa from chromosome 3 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 136470 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 551 acgccgaagctgtacacgtcgctctt 576 |||||||||||||||||||||||||| Sbjct: 117647 acgccgaagctgtacacgtcgctctt 117672 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 551 acgccgaagctgtacacgtcgctctt 576 |||||||||||||||||||||||||| Sbjct: 79255 acgccgaagctgtacacgtcgctctt 79280
>gb|AC099732.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1203D03, complete sequence Length = 82352 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 554 ccgaagctgtacacgtcgctcttctc 579 |||||||||||||||||||||||||| Sbjct: 51201 ccgaagctgtacacgtcgctcttctc 51176
>gb|AC098693.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1004C08, complete sequence Length = 133090 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 528 ccgtgatcatctccagcagcagcacgccgaagctgtacacgtcgctcttc 577 |||||| || ||| ||||||| ||||||||||| ||||||||| |||||| Sbjct: 79338 ccgtgagcagctcaagcagcaccacgccgaagcagtacacgtcactcttc 79387
>dbj|AK221242.1| Arabidopsis thaliana mRNA for receptor protein kinase-like, complete cds, clone: RAFL24-01-J08 Length = 3127 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Minus Query: 569 tcgctcttctccgtcagctgctgcgtcatgtagtactcagggtccaggtaccccattgtg 628 ||||||||||| |||| || | |||||||||||||||||| |||| ||| ||||| || Sbjct: 2607 tcgctcttctctgtcaattgattcgtcatgtagtactcaggatccaagtagcccatagtt 2548 Query: 629 cccttgactt 638 ||||| |||| Sbjct: 2547 cccttcactt 2538
>dbj|AP004401.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0534A03 Length = 153170 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 538 ctccagcagcagcacgccgaagctgtacacgtcg 571 |||||||| |||||||||||||||| |||||||| Sbjct: 110581 ctccagcaccagcacgccgaagctgaacacgtcg 110614
>dbj|AP003943.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1119_B04 Length = 151721 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 536 atctccagcagcagcacgccgaagctgtacacgt 569 ||||||||||||| ||| |||||||||||||||| Sbjct: 113898 atctccagcagcaccaccccgaagctgtacacgt 113931
>dbj|AP005412.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0050G13 Length = 150685 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 554 ccgaagctgtacacgtcgctcttctc 579 |||||||||||||||||||||||||| Sbjct: 85518 ccgaagctgtacacgtcgctcttctc 85543
>dbj|AP004043.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1124_D06 Length = 102239 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 538 ctccagcagcagcacgccgaagctgtacacgtcg 571 |||||| || |||||||||||||||||||||||| Sbjct: 85541 ctccaggaggagcacgccgaagctgtacacgtcg 85574
>dbj|AP000417.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MMB12 Length = 73977 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 554 ccgaagctgtacacgtcgctcttctc 579 |||||||||||||||||||||||||| Sbjct: 53206 ccgaagctgtacacgtcgctcttctc 53181
>dbj|AK121286.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023108P09, full insert sequence Length = 3313 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 554 ccgaagctgtacacgtcgctcttctc 579 |||||||||||||||||||||||||| Sbjct: 2670 ccgaagctgtacacgtcgctcttctc 2645
>dbj|AK111823.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023048C13, full insert sequence Length = 3430 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 536 atctccagcagcagcacgccgaagctgtacacgt 569 ||||||||||||| ||| |||||||||||||||| Sbjct: 2669 atctccagcagcaccaccccgaagctgtacacgt 2636
>emb|AJ234733.1|HVU234733 Hordeum vulgare genomic DNA fragment; clone MWG2041.rev Length = 367 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 538 ctccagcagcagcacgccgaagctgtacacgtcg 571 |||||||| || |||||||||||||||||||||| Sbjct: 172 ctccagcaccaccacgccgaagctgtacacgtcg 205
>dbj|AK109138.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-155-E06, full insert sequence Length = 906 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 528 ccgtgatcatctccagcagcagcacgccgaagctgtacacgtcgctcttc 577 |||||| || ||| ||||||| ||||||||||| ||||||||| |||||| Sbjct: 431 ccgtgagcagctcaagcagcaccacgccgaagcagtacacgtcactcttc 382
>dbj|AK107091.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-H01, full insert sequence Length = 2265 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 554 ccgaagctgtacacgtcgctcttctccgtc 583 ||||||||||||||||||| |||||||||| Sbjct: 1322 ccgaagctgtacacgtcgcccttctccgtc 1293
>dbj|AK103700.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033136L05, full insert sequence Length = 2565 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 554 ccgaagctgtacacgtcgctcttctccgtc 583 ||||||||||||||||||| |||||||||| Sbjct: 1921 ccgaagctgtacacgtcgcacttctccgtc 1892
>dbj|AK101172.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033028O18, full insert sequence Length = 1857 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 538 ctccagcagcagcacgccgaagctgtacacgtcg 571 |||||| || |||||||||||||||||||||||| Sbjct: 1136 ctccaggaggagcacgccgaagctgtacacgtcg 1103
>gb|AY111660.1| Zea mays CL50517_1 mRNA sequence Length = 600 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 536 atctccagcagcagcacgccgaagctgtacacgt 569 ||||||||||||| ||| |||||||||||||||| Sbjct: 420 atctccagcagcaccaccccgaagctgtacacgt 453
>dbj|AP005126.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0041B22 Length = 142446 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 538 ctccagcagcagcacgccgaagctgtacacgtcg 571 |||||||| |||||||||||||||| |||||||| Sbjct: 7074 ctccagcaccagcacgccgaagctgaacacgtcg 7107
>emb|AL606685.3|OSJN00090 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0071I13, complete sequence Length = 152264 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 554 ccgaagctgtacacgtcgctcttctccgtc 583 ||||||||||||||||||| |||||||||| Sbjct: 30643 ccgaagctgtacacgtcgcacttctccgtc 30614 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Minus Query: 547 cagcacgccgaagctgtacacgtcgc 572 ||||| |||||||||||||||||||| Sbjct: 37893 cagcatgccgaagctgtacacgtcgc 37868 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 551 acgccgaagctgtacacgtcg 571 ||||||||||||||||||||| Sbjct: 19589 acgccgaagctgtacacgtcg 19569 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 551 acgccgaagctgtacacgtcg 571 ||||||||||||||||||||| Sbjct: 10076 acgccgaagctgtacacgtcg 10096
>ref|XM_550065.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2291 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Minus Query: 535 catctccagcagcagcacgccgaagctgtacacgtcg 571 ||||||||||||||||| ||| |||||||||||||| Sbjct: 1664 catctccagcagcagcatcccgtagctgtacacgtcg 1628
>gb|AC136217.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0030I14, complete sequence Length = 159035 Score = 50.1 bits (25), Expect = 0.009 Identities = 43/49 (87%) Strand = Plus / Plus Query: 528 ccgtgatcatctccagcagcagcacgccgaagctgtacacgtcgctctt 576 |||| |||| ||||||||||| ||| || |||||||| ||||||||||| Sbjct: 105819 ccgttatcagctccagcagcaccaccccaaagctgtaaacgtcgctctt 105867
>ref|XM_471176.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3408 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Minus Query: 538 ctccagcagcagcacgccgaagctgtacacgtcgctcttctccgt 582 |||||||| || ||| ||| |||||||||||||||| |||||||| Sbjct: 2982 ctccagcaccaccaccccgtagctgtacacgtcgcttttctccgt 2938
>ref|NM_187384.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3825 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 559 gctgtacacgtcgctcttctccgtc 583 ||||||||||||||||||||||||| Sbjct: 3516 gctgtacacgtcgctcttctccgtc 3492
>gb|AC119747.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1293G11, from chromosome 3, complete sequence Length = 147806 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Minus Query: 578 tccgtcagctgctgcgtcatgtagtactcagggtccaggta 618 |||||||||||||||||| || ||||||| ||||| ||||| Sbjct: 49386 tccgtcagctgctgcgtcttgaagtactccgggtcgaggta 49346
>gb|AY083681.1| Avena sativa clone OP14 receptor kinase gene cluster, complete sequence Length = 13990 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 535 catctccagcagcagcacgccgaagctgtacacgtcg 571 ||||||||||||||||| || ||||||||||||||| Sbjct: 1456 catctccagcagcagcatcccaaagctgtacacgtcg 1492
>gb|AY083679.1| Avena sativa clone OP10rc receptor kinase gene cluster, complete sequence Length = 12232 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 535 catctccagcagcagcacgccgaagctgtacacgtcg 571 ||||||||||||||||| || ||||||||||||||| Sbjct: 1534 catctccagcagcagcatcccaaagctgtacacgtcg 1570
>gb|AF325196.1|AF325196 Triticum aestivum PST19 (Pst19), LRR19 (Lrr19), TAK19-1 (Tak19-1), and LRK19 (Lrk19) genes, complete cds Length = 35872 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 535 catctccagcagcagcacgccgaagctgtacacgtcg 571 |||||||||||||| || |||||||||||||||||| Sbjct: 35193 catctccagcagcaacatcccgaagctgtacacgtcg 35229 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 535 catctccagcagcagcacgccgaagctgtacac 567 |||||||||||||| || |||||||||||||| Sbjct: 25930 catctccagcagcaacatcccgaagctgtacac 25962
>dbj|AP004006.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1197_D06 Length = 103844 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 559 gctgtacacgtcgctcttctccgtc 583 ||||||||||||||||||||||||| Sbjct: 60176 gctgtacacgtcgctcttctccgtc 60200
>dbj|AP004259.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0005E02 Length = 89380 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 559 gctgtacacgtcgctcttctccgtc 583 ||||||||||||||||||||||||| Sbjct: 87664 gctgtacacgtcgctcttctccgtc 87688
>dbj|AK121779.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033093K02, full insert sequence Length = 4116 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Minus Query: 538 ctccagcagcagcacgccgaagctgtacacgtcgctcttctccgt 582 |||||||| || ||| ||| |||||||||||||||| |||||||| Sbjct: 3355 ctccagcaccaccaccccgtagctgtacacgtcgcttttctccgt 3311
>dbj|AK112081.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-H09, full insert sequence Length = 3835 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Minus Query: 538 ctccagcagcagcacgccgaagctgtacacgtcgctcttctccgt 582 |||||||| || ||| ||| |||||||||||||||| |||||||| Sbjct: 3066 ctccagcaccaccaccccgtagctgtacacgtcgcttttctccgt 3022
>dbj|AK110482.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-167-A07, full insert sequence Length = 2291 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Minus Query: 535 catctccagcagcagcacgccgaagctgtacacgtcg 571 ||||||||||||||||| ||| |||||||||||||| Sbjct: 1664 catctccagcagcagcatcccgtagctgtacacgtcg 1628
>dbj|AK105735.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-H11, full insert sequence Length = 2291 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Minus Query: 578 tccgtcagctgctgcgtcatgtagtactcagggtccaggta 618 |||||||||||||||||| || ||||||| ||||| ||||| Sbjct: 1686 tccgtcagctgctgcgtcttgaagtactccgggtcgaggta 1646
>dbj|AK102524.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033096A14, full insert sequence Length = 2725 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Minus Query: 578 tccgtcagctgctgcgtcatgtagtactcagggtccaggta 618 |||||||||||||||||| || ||||||| ||||| ||||| Sbjct: 2135 tccgtcagctgctgcgtcttgaagtactccgggtcgaggta 2095
>gb|AY109753.1| Zea mays CL12097_1 mRNA sequence Length = 1300 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Minus Query: 538 ctccagcagcagcacgccgaagctgtacacgtc 570 ||||||||| | ||||||||||||||||||||| Sbjct: 517 ctccagcaggaccacgccgaagctgtacacgtc 485
>gb|AY105142.1| Zea mays PCO126160 mRNA sequence Length = 763 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Minus Query: 545 agcagcacgccgaagctgtacacgtcgctcttctccgtcag 585 |||| |||||||||||| |||||||||||||| ||||||| Sbjct: 415 agcaccacgccgaagctccacacgtcgctcttcgccgtcag 375
>emb|AL662985.3|OSJN00189 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0095H06, complete sequence Length = 126447 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Minus Query: 538 ctccagcagcagcacgccgaagctgtacacgtcgctcttctccgt 582 |||||||| || ||| ||| |||||||||||||||| |||||||| Sbjct: 41844 ctccagcaccaccaccccgtagctgtacacgtcgcttttctccgt 41800
>emb|AL731784.3|CNS08C88 Oryza sativa chromosome 12, . BAC OSJNBa0016C14 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 162261 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 551 acgccgaagctgtacacgtcgctcttctc 579 |||||||||||||| |||||||||||||| Sbjct: 129864 acgccgaagctgtagacgtcgctcttctc 129836
>gb|AC144455.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0086G17, complete sequence Length = 134631 Score = 50.1 bits (25), Expect = 0.009 Identities = 43/49 (87%) Strand = Plus / Plus Query: 528 ccgtgatcatctccagcagcagcacgccgaagctgtacacgtcgctctt 576 |||| |||| ||||||||||| ||| || |||||||| ||||||||||| Sbjct: 42064 ccgttatcagctccagcagcaccaccccaaagctgtaaacgtcgctctt 42112
>ref|NM_124354.2| Arabidopsis thaliana kinase AT5G49760 mRNA, complete cds Length = 3416 Score = 48.1 bits (24), Expect = 0.036 Identities = 63/76 (82%) Strand = Plus / Minus Query: 563 tacacgtcgctcttctccgtcagctgctgcgtcatgtagtactcagggtccaggtacccc 622 ||||| |||||||||||||| | || | ||||||||||||||| || |||| ||| ||| Sbjct: 2754 tacacatcgctcttctccgttaattgattcgtcatgtagtactctggatccaagtagccc 2695 Query: 623 attgtgcccttgactt 638 || || || ||||||| Sbjct: 2694 atggttcctttgactt 2679
>ref|XM_482068.1| Oryza sativa (japonica cultivar-group), mRNA Length = 927 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Minus Query: 551 acgccgaagctgtacacgtcgctc 574 |||||||||||||||||||||||| Sbjct: 632 acgccgaagctgtacacgtcgctc 609
>ref|NM_187624.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1404 Score = 48.1 bits (24), Expect = 0.036 Identities = 33/36 (91%) Strand = Plus / Minus Query: 538 ctccagcagcagcacgccgaagctgtacacgtcgct 573 ||||| ||||||||||||||||||||| | |||||| Sbjct: 1071 ctccatcagcagcacgccgaagctgtagatgtcgct 1036
>ref|NM_192557.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1485 Score = 48.1 bits (24), Expect = 0.036 Identities = 39/44 (88%) Strand = Plus / Minus Query: 533 atcatctccagcagcagcacgccgaagctgtacacgtcgctctt 576 ||||||||||| |||| ||| || |||||||||||||| ||||| Sbjct: 1031 atcatctccagtagcaccactccaaagctgtacacgtcactctt 988
>ref|XM_479008.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3330 Score = 48.1 bits (24), Expect = 0.036 Identities = 27/28 (96%) Strand = Plus / Minus Query: 545 agcagcacgccgaagctgtacacgtcgc 572 |||||||||||| ||||||||||||||| Sbjct: 3071 agcagcacgccgtagctgtacacgtcgc 3044
>gb|AC148822.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0036K13 map near R3342S, complete sequence Length = 135684 Score = 48.1 bits (24), Expect = 0.036 Identities = 39/44 (88%) Strand = Plus / Minus Query: 539 tccagcagcagcacgccgaagctgtacacgtcgctcttctccgt 582 |||||||||| || || || ||||||||||||||||||||||| Sbjct: 92037 tccagcagcacgactccaaaactgtacacgtcgctcttctccgt 91994 Score = 48.1 bits (24), Expect = 0.036 Identities = 39/44 (88%) Strand = Plus / Minus Query: 539 tccagcagcagcacgccgaagctgtacacgtcgctcttctccgt 582 ||||| |||| ||| || || ||||||||||||||||||||||| Sbjct: 60379 tccaggagcaccactccaaaactgtacacgtcgctcttctccgt 60336
>gb|AC104473.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1626B05, complete sequence Length = 127946 Score = 48.1 bits (24), Expect = 0.036 Identities = 33/36 (91%) Strand = Plus / Plus Query: 538 ctccagcagcagcacgccgaagctgtacacgtcgct 573 ||||| ||||||||||||||||||||| | |||||| Sbjct: 117886 ctccatcagcagcacgccgaagctgtagatgtcgct 117921
>gb|BT006486.1| Arabidopsis thaliana At5g49760 gene, complete cds Length = 2862 Score = 48.1 bits (24), Expect = 0.036 Identities = 63/76 (82%) Strand = Plus / Minus Query: 563 tacacgtcgctcttctccgtcagctgctgcgtcatgtagtactcagggtccaggtacccc 622 ||||| |||||||||||||| | || | ||||||||||||||| || |||| ||| ||| Sbjct: 2447 tacacatcgctcttctccgttaattgattcgtcatgtagtactctggatccaagtagccc 2388 Query: 623 attgtgcccttgactt 638 || || || ||||||| Sbjct: 2387 atggttcctttgactt 2372
>gb|AY224427.1| Oryza sativa (japonica cultivar-group) isolate 20474 receptor kinase-like protein mRNA, complete cds Length = 1170 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Minus Query: 551 acgccgaagctgtacacgtcgctc 574 |||||||||||||||||||||||| Sbjct: 875 acgccgaagctgtacacgtcgctc 852
>emb|BX829494.1|CNS09ZX2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB17ZC04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1321 Score = 48.1 bits (24), Expect = 0.036 Identities = 63/76 (82%) Strand = Plus / Minus Query: 563 tacacgtcgctcttctccgtcagctgctgcgtcatgtagtactcagggtccaggtacccc 622 ||||| |||||||||||||| | || | ||||||||||||||| || |||| ||| ||| Sbjct: 833 tacacatcgctcttctccgttaattgattcgtcatgtagtactctggatccaagtagccc 774 Query: 623 attgtgcccttgactt 638 || || || ||||||| Sbjct: 773 atggttcctttgactt 758
>dbj|AP003300.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0700A11 Length = 136321 Score = 48.1 bits (24), Expect = 0.036 Identities = 39/44 (88%) Strand = Plus / Plus Query: 533 atcatctccagcagcagcacgccgaagctgtacacgtcgctctt 576 ||||||||||| |||| ||| || |||||||||||||| ||||| Sbjct: 119401 atcatctccagtagcaccactccaaagctgtacacgtcactctt 119444
>dbj|AP003915.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1579_C03 Length = 122851 Score = 48.1 bits (24), Expect = 0.036 Identities = 27/28 (96%) Strand = Plus / Plus Query: 545 agcagcacgccgaagctgtacacgtcgc 572 |||||||||||| ||||||||||||||| Sbjct: 28095 agcagcacgccgtagctgtacacgtcgc 28122
>dbj|AP004275.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0453E05 Length = 137364 Score = 48.1 bits (24), Expect = 0.036 Identities = 27/28 (96%) Strand = Plus / Plus Query: 545 agcagcacgccgaagctgtacacgtcgc 572 |||||||||||| ||||||||||||||| Sbjct: 106453 agcagcacgccgtagctgtacacgtcgc 106480
>emb|AL928757.3|CNS08CBU Oryza sativa chromosome 12, . BAC OSJNBb0046O08 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 101075 Score = 48.1 bits (24), Expect = 0.036 Identities = 30/32 (93%) Strand = Plus / Minus Query: 536 atctccagcagcagcacgccgaagctgtacac 567 |||||||| |||| |||||||||||||||||| Sbjct: 42680 atctccaggagcaccacgccgaagctgtacac 42649
>dbj|AK117123.1| Arabidopsis thaliana At5g49760 mRNA for putative receptor protein kinase, complete cds, clone: RAFL16-66-A16 Length = 3417 Score = 48.1 bits (24), Expect = 0.036 Identities = 63/76 (82%) Strand = Plus / Minus Query: 563 tacacgtcgctcttctccgtcagctgctgcgtcatgtagtactcagggtccaggtacccc 622 ||||| |||||||||||||| | || | ||||||||||||||| || |||| ||| ||| Sbjct: 2754 tacacatcgctcttctccgttaattgattcgtcatgtagtactctggatccaagtagccc 2695 Query: 623 attgtgcccttgactt 638 || || || ||||||| Sbjct: 2694 atggttcctttgactt 2679
>dbj|AK121769.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033092C05, full insert sequence Length = 2612 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Minus Query: 548 agcacgccgaagctgtacacgtcg 571 |||||||||||||||||||||||| Sbjct: 2032 agcacgccgaagctgtacacgtcg 2009
>dbj|AK120815.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023014N07, full insert sequence Length = 3856 Score = 48.1 bits (24), Expect = 0.036 Identities = 27/28 (96%) Strand = Plus / Minus Query: 545 agcagcacgccgaagctgtacacgtcgc 572 |||||||||||| ||||||||||||||| Sbjct: 3273 agcagcacgccgtagctgtacacgtcgc 3246
>dbj|AK119897.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-180-C07, full insert sequence Length = 3732 Score = 48.1 bits (24), Expect = 0.036 Identities = 27/28 (96%) Strand = Plus / Minus Query: 545 agcagcacgccgaagctgtacacgtcgc 572 |||||||||||| ||||||||||||||| Sbjct: 3231 agcagcacgccgtagctgtacacgtcgc 3204
>dbj|AK109461.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-C09, full insert sequence Length = 3605 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Minus Query: 548 agcacgccgaagctgtacacgtcg 571 |||||||||||||||||||||||| Sbjct: 2907 agcacgccgaagctgtacacgtcg 2884 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,453,958 Number of Sequences: 3902068 Number of extensions: 5453958 Number of successful extensions: 135999 Number of sequences better than 10.0: 547 Number of HSP's better than 10.0 without gapping: 601 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 125964 Number of HSP's gapped (non-prelim): 10029 length of query: 638 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 615 effective length of database: 17,143,297,704 effective search space: 10543128087960 effective search space used: 10543128087960 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
