>SRYB_DROME (P07665) Serendipity locus protein beta|
          Length = 356

 Score = 31.2 bits (69), Expect = 0.63
 Identities = 24/85 (28%), Positives = 36/85 (42%), Gaps = 3/85 (3%)
 Frame = -2

Query: 343 PSHNAVGGPASQLPKRKPLSEEEIEAIMQGGVF*YCFPTSCTFSGAPISPMPCSIRNRFA 164
           P+   V   A + P+R+P  E+E E  M+  +    F  S      P   MP S    F 
Sbjct: 112 PAFKIVQATALKEPERQPGEEDECEEFMKEEMLDEEFQFS-----EPDDSMPSSEEEFFT 166

Query: 163 QE---PCYLWNSCFWSPELTNRHTR 98
           +    PC++    F S E+  RH +
Sbjct: 167 ETTEIPCHICGEMFSSQEVLERHIK 191

>PERM_MOUSE (P11247) Myeloperoxidase precursor (EC 1.11.1.7) (MPO) [Contains:|
           Myeloperoxidase light chain; Myeloperoxidase heavy
           chain]
          Length = 718

 Score = 30.8 bits (68), Expect = 0.83
 Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
 Frame = -2

Query: 190 PCSIRNRFAQEPCYLWNSCFWS--PELTNRHTRF 95
           PC + NR A+ PC+L      S  PELT+ HT F
Sbjct: 360 PCLLTNRSARIPCFLAGDMRSSEMPELTSMHTLF 393

>COAT_GMDNV (Q90125) Coat protein VP1 (Structural protein VP1) [Contains: Coat|
           protein VP (Structural protein VP2); Coat protein VP3
           (Structural protein VP3); Coat protein VP4 (Structural
           protein VP4)]
          Length = 811

 Score = 30.8 bits (68), Expect = 0.83
 Identities = 32/127 (25%), Positives = 54/127 (42%), Gaps = 3/127 (2%)
 Frame = +3

Query: 6   FGKDGAPTHTSHVQRSPFLVSH--MYAGNNSGNRVWRLVSSGDQKQEFHK*HGSCAKRLR 179
           FG  G   H   V    FL ++  MY   N G   W  ++   Q+ +    +  C   + 
Sbjct: 570 FGNAGNYPH-HQVSSFTFLQNYYCMYQQTNQGTGGWPCLAEHLQQFDSKTVNNQCLIDVT 628

Query: 180 MLHGIGLIGAPLKVQLVGKQYQKTPPCMIASISSSESGLRL-GSCEAGPPTAL*EGAGGT 356
               +GLI +PL  +++G+      P +  +IS  ++ + + G+    PP A    A  T
Sbjct: 629 YKPKMGLIKSPLNYKIIGQ------PTVKGTISVGDNLVNMRGAVVTNPPEATQNVAEST 682

Query: 357 SDLKR*F 377
            +L R F
Sbjct: 683 HNLTRNF 689

>SYMM_FUGRU (Q90YI3) Methionyl-tRNA synthetase, mitochondrial precursor (EC|
           6.1.1.10) (Methionine--tRNA ligase 2) (Mitochondrial
           methionine--tRNA ligase) (MtMetRS)
          Length = 590

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +1

Query: 37  HMFSVHHFWLVTCMQGIIQETGCGGW 114
           H  +V HFW V C +G+I +    GW
Sbjct: 139 HHRAVQHFWSVLCSKGLIYKGSYEGW 164

>YBJD_ECOLI (P75828) Hypothetical protein ybjD|
          Length = 552

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 5/76 (6%)
 Frame = +2

Query: 161 LCKTVTNAARHRAYWRSTKGAAGGEAISEDTALHDSFN----LFLREWFAL-GKL*SWPS 325
           +C+ V  ++R  A+     G +  +  S   + H  FN    LF R W  + G+  +W  
Sbjct: 336 VCRLVRESSRVAAWRLGPSGLSTED--SRRISFHIRFNRPSSLFARCWLLVEGETETWVI 393

Query: 326 NSIMRRCGWHI*SKAV 373
           N + R+CG H  ++ +
Sbjct: 394 NELARQCGHHFDAEGI 409

>PITX1_DROME (O18400) Pituitary homeobox 1 homolog (D-PTX1)|
          Length = 509

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 3/52 (5%)
 Frame = +3

Query: 156 GSCAKRLRMLHGIGLIGAPLKVQLVGKQYQ---KTPPCMIASISSSESGLRL 302
           GS    L     +G +GAP         Y       PCM +S+SSS + LRL
Sbjct: 416 GSMGSSLSNTSNVGAVGAPCPYTTPANPYMYRSAAEPCMSSSMSSSIATLRL 467

>PERM_HUMAN (P05164) Myeloperoxidase precursor (EC 1.11.1.7) (MPO) [Contains:|
           89 kDa myeloperoxidase; 84 kDa myeloperoxidase;
           Myeloperoxidase light chain; Myeloperoxidase heavy
           chain]
          Length = 745

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
 Frame = -2

Query: 190 PCSIRNRFAQEPCYLWNSCFWS--PELTNRHT 101
           PC + NR A+ PC+L      S  PELT+ HT
Sbjct: 386 PCLLTNRSARIPCFLAGDTRSSEMPELTSMHT 417

>COBQ_DEIRA (Q9RZU9) Cobyric acid synthase|
          Length = 474

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 19/51 (37%), Positives = 22/51 (43%)
 Frame = +3

Query: 162 CAKRLRMLHGIGLIGAPLKVQLVGKQYQKTPPCMIASISSSESGLRLGSCE 314
           CA   RML   GL  AP K Q +      TPP       SS  GL +G  +
Sbjct: 15  CAALCRMLSDEGLRVAPFKAQNMSNNAGVTPP------ESSAPGLEMGRAQ 59

>ANK2_HUMAN (Q01484) Ankyrin-2 (Brain ankyrin) (Ankyrin-B) (Ankyrin,|
            nonerythroid)
          Length = 3924

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 14/55 (25%), Positives = 24/55 (43%)
 Frame = -2

Query: 319  PASQLPKRKPLSEEEIEAIMQGGVF*YCFPTSCTFSGAPISPMPCSIRNRFAQEP 155
            P  + P R  L    +E  M+ G+F   FP     +   +     S+R+R  ++P
Sbjct: 2426 PLKESPCRDSLESSPVEPKMKAGIFPSHFPLPAAVAKTELLTEVASVRSRLLRDP 2480

>SYMM_NEUCR (Q9C2H9) Probable methionyl-tRNA synthetase, mitochondrial (EC|
           6.1.1.10) (Methionine--tRNA ligase) (MetRS)
          Length = 622

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +1

Query: 37  HMFSVHHFWLVTCMQGIIQETGCGGW 114
           H+ +V HFWL+   +G+I E    GW
Sbjct: 157 HVEAVKHFWLLLKEKGLIYEAKHEGW 182

>PERE_MOUSE (P49290) Eosinophil peroxidase precursor (EC 1.11.1.7) (EPO)|
           [Contains: Eosinophil peroxidase light chain; Eosinophil
           peroxidase heavy chain]
          Length = 716

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
 Frame = -2

Query: 190 PCSIRNRFAQEPCYLWNSCFWS--PELTNRHTRF 95
           PC + NR A+ PC+L      S  P+LT  HT F
Sbjct: 359 PCLLTNRSARIPCFLAGDTRSSETPKLTALHTLF 392

>YOS1_SCHPO (P87319) Hypothetical protein C21C3.01c in chromosome II|
          Length = 3011

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -2

Query: 172  RFAQEPCYLWNSCFWSPELTNRHTR 98
            + +   CYLW+S F+  E+ + H R
Sbjct: 2306 KLSSSDCYLWSSSFYIEEIGSTHVR 2330

>PP2A_TOBAC (Q9XGH7) Serine/threonine-protein phosphatase PP2A catalytic|
           subunit (EC 3.1.3.16)
          Length = 312

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = -2

Query: 355 VPPAPSHNAVGGPASQLPKRKPLSEEEIEAIMQ 257
           VP + SH  +    +QL + KPLSE+E+  + +
Sbjct: 4   VPSSASHGNLDEQIAQLMQCKPLSEQEVRGLCE 36

>ARGB_MORPR (Q9K4Z5) Acetylglutamate kinase (EC 2.7.2.8) (NAG kinase) (AGK)|
           (N-acetyl-L-glutamate 5-phosphotransferase)
          Length = 264

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 13/25 (52%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
 Frame = +3

Query: 264 IASISSSESGL-RLGSCEAGPPTAL 335
           IA+++ S +GL  +G CEAG PT L
Sbjct: 115 IATVTQSTAGLGAVGECEAGDPTLL 139


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,463,540
Number of Sequences: 219361
Number of extensions: 1423114
Number of successful extensions: 3814
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3710
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3813
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 1396778976
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)