Clone Name | rbasd22d13 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | CG146_ARATH (Q93VG8) UPF0326 protein At4g17486 | 219 | 8e-57 | 2 | CG146_PONPY (Q5R456) UPF0326 protein CGI-146 homolog | 120 | 4e-27 | 3 | CG146_MOUSE (Q9D291) UPF0326 protein CGI-146 homolog | 120 | 4e-27 | 4 | CG146_HUMAN (Q9BSY9) UPF0326 protein CGI-146 | 120 | 4e-27 | 5 | HAG1_SCHPO (Q8X1T0) UPF0326 protein hag1 | 102 | 1e-21 | 6 | HEX1_VIBFU (P96155) Beta-hexosaminidase (EC 3.2.1.52) (N-acetyl-... | 31 | 4.1 | 7 | LIPA_MYCPA (P61197) Lipoyl synthase (EC 2.8.1.-) (Lipoic acid sy... | 30 | 5.3 | 8 | GLGB_FELCA (Q6T308) 1,4-alpha-glucan branching enzyme (EC 2.4.1.... | 30 | 9.1 |
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>CG146_ARATH (Q93VG8) UPF0326 protein At4g17486| Length = 224 Score = 219 bits (557), Expect = 8e-57 Identities = 90/158 (56%), Positives = 128/158 (81%), Gaps = 1/158 (0%) Frame = -1 Query: 669 PVVLNVYDLTPLNNYVHWCGLGIFHSAVEVHGSEYSFGAHDLPTSGVFEVEPKSCPGFLY 490 PV LNVYDLTP+NNY++W G+GIFHS +E H EY +GAH+ PTSGV+EVEP++CPGF++ Sbjct: 27 PVYLNVYDLTPVNNYLYWFGIGIFHSGIEAHNLEYCYGAHEYPTSGVYEVEPRNCPGFIF 86 Query: 489 RSSIFIGRTSLHPLEFRDFIQRMASEYHGDTYHLISKNCNHFTDDLSTRLTGKPIPGWVN 310 R S+ +G TS+ +FR ++++++ +YHGDTYHLI+KNCNHFT+++ +LTGKPIPGW+N Sbjct: 87 RRSVLLGTTSMSRSDFRSYMEKLSRKYHGDTYHLIAKNCNHFTEEVCLQLTGKPIPGWIN 146 Query: 309 RLAKLGAFCNCLLPESMRLESTET-KNLTDYHFSDDSN 199 RLA++G+FCNCLLPES++L + ++ D+SN Sbjct: 147 RLARVGSFCNCLLPESIQLTAVSALPERLEFSDEDESN 184
>CG146_PONPY (Q5R456) UPF0326 protein CGI-146 homolog| Length = 194 Score = 120 bits (301), Expect = 4e-27 Identities = 60/159 (37%), Positives = 91/159 (57%), Gaps = 11/159 (6%) Frame = -1 Query: 666 VVLNVYDLTPLNNYVHWCGLGIFHSAVEVHGSEYSFGAHDLPTSGVFEVEPKSCPG---- 499 VVLNVYD+ +N Y G+G+FHS +EV+G E+++G H P SG+FE+ P + Sbjct: 7 VVLNVYDMYWMNEYTSSIGIGVFHSGIEVYGREFAYGGHPYPFSGIFEISPGNASELGET 66 Query: 498 FLYRSSIFIGRTSLHPLEFRDFIQRMASEYHGDTYHLISKNCNHFTDDLSTRLTGKPIPG 319 F ++ ++ +G T + ++ + EY G+ YHL+ KNCNHF+ LS L GK IP Sbjct: 67 FKFKEAVVLGSTDFLEDDIEKIVEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPR 126 Query: 318 WVNRLAKLGA---FCNCLLPES----MRLESTETKNLTD 223 W+NRLA + F LP+ L+S+ ++ L D Sbjct: 127 WINRLAYFSSCIPFLQSCLPKEWLTPAALQSSVSQELQD 165
>CG146_MOUSE (Q9D291) UPF0326 protein CGI-146 homolog| Length = 194 Score = 120 bits (301), Expect = 4e-27 Identities = 60/159 (37%), Positives = 91/159 (57%), Gaps = 11/159 (6%) Frame = -1 Query: 666 VVLNVYDLTPLNNYVHWCGLGIFHSAVEVHGSEYSFGAHDLPTSGVFEVEPKSCPG---- 499 VVLNVYD+ +N Y G+G+FHS +EV+G E+++G H P SG+FE+ P + Sbjct: 7 VVLNVYDMYWMNEYTSSIGIGVFHSGIEVYGREFAYGGHPYPFSGIFEISPGNASELGET 66 Query: 498 FLYRSSIFIGRTSLHPLEFRDFIQRMASEYHGDTYHLISKNCNHFTDDLSTRLTGKPIPG 319 F ++ ++ +G T + ++ + EY G+ YHL+ KNCNHF+ LS L GK IP Sbjct: 67 FKFKEAVVLGSTDFLEDDIEKIVEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPR 126 Query: 318 WVNRLAKLGA---FCNCLLPES----MRLESTETKNLTD 223 W+NRLA + F LP+ L+S+ ++ L D Sbjct: 127 WINRLAYFSSCIPFLQSCLPKEWLTPAALQSSVSQELQD 165
>CG146_HUMAN (Q9BSY9) UPF0326 protein CGI-146| Length = 194 Score = 120 bits (301), Expect = 4e-27 Identities = 60/159 (37%), Positives = 91/159 (57%), Gaps = 11/159 (6%) Frame = -1 Query: 666 VVLNVYDLTPLNNYVHWCGLGIFHSAVEVHGSEYSFGAHDLPTSGVFEVEPKSCPG---- 499 VVLNVYD+ +N Y G+G+FHS +EV+G E+++G H P SG+FE+ P + Sbjct: 7 VVLNVYDMYWMNEYTSSIGIGVFHSGIEVYGREFAYGGHPYPFSGIFEISPGNASELGET 66 Query: 498 FLYRSSIFIGRTSLHPLEFRDFIQRMASEYHGDTYHLISKNCNHFTDDLSTRLTGKPIPG 319 F ++ ++ +G T + ++ + EY G+ YHL+ KNCNHF+ LS L GK IP Sbjct: 67 FKFKEAVVLGSTDFLEDDIEKIVEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPR 126 Query: 318 WVNRLAKLGA---FCNCLLPES----MRLESTETKNLTD 223 W+NRLA + F LP+ L+S+ ++ L D Sbjct: 127 WINRLAYFSSCIPFLQSCLPKEWLTPAALQSSVSQELQD 165
>HAG1_SCHPO (Q8X1T0) UPF0326 protein hag1| Length = 201 Score = 102 bits (253), Expect = 1e-21 Identities = 60/169 (35%), Positives = 94/169 (55%), Gaps = 9/169 (5%) Frame = -1 Query: 666 VVLNVYDL---TPLNNYVHWCGLGIFHSAVEVHGSEYSFGAHDLPTS-GVFEVEPKS-CP 502 V +NVYDL +P+N GLGI+H+ + + G EY+FGAH++P S GVF P+ Sbjct: 3 VYINVYDLMPDSPVNKLAWTLGLGIYHTGLVLEGKEYAFGAHEIPGSTGVFATMPRPPLE 62 Query: 501 GFLYRSSIFIGRTSLHPLEFRDFIQRMASEYHGDTYHLISKNCNHFTDDLSTRLTGKPIP 322 G +R SI + +L + + R++ E+ G +Y L+ +NCNHFT+ + LTG PIP Sbjct: 63 GCRWRCSIALPNCTLPKPDVDRILIRLSQEFTGLSYSLLERNCNHFTNAAAIELTGSPIP 122 Query: 321 GWVNRLAKLG----AFCNCLLPESMRLESTETKNLTDYHFSDDSNLTIN 187 ++NR++++G N LL KN +D S DS+ ++ Sbjct: 123 SFLNRISRIGLAFPTITNALLQHGQ-------KNTSDVDDSSDSSSDVD 164
>HEX1_VIBFU (P96155) Beta-hexosaminidase (EC 3.2.1.52)| (N-acetyl-beta-glucosaminidase) (Beta-N-acetylhexosaminidase) Length = 611 Score = 30.8 bits (68), Expect = 4.1 Identities = 22/76 (28%), Positives = 32/76 (42%) Frame = -1 Query: 513 KSCPGFLYRSSIFIGRTSLHPLEFRDFIQRMASEYHGDTYHLISKNCNHFTDDLSTRLTG 334 K P F YR + HPLE + + Y +T+H H TDD R+ Sbjct: 255 KDAPRFKYRGMMLDCARHFHPLERVKRLINQLAHYKFNTFHW------HLTDDEGWRIEI 308 Query: 333 KPIPGWVNRLAKLGAF 286 K +P +L +GA+ Sbjct: 309 KSLP----QLTDIGAW 320
>LIPA_MYCPA (P61197) Lipoyl synthase (EC 2.8.1.-) (Lipoic acid synthase)| (Lipoate synthase) (Lipoyl-acyl-carrier protein synthase) (Sulfur insertion protein lipA) (Lip-syn) Length = 307 Score = 30.4 bits (67), Expect = 5.3 Identities = 14/30 (46%), Positives = 17/30 (56%) Frame = -3 Query: 652 VRPHAAKQLRPLVRARHLPLRRRSPWIRVQ 563 V P K LR VR P+ R+ PWIRV+ Sbjct: 3 VAPEGRKLLRLEVRNAETPIERKPPWIRVR 32
>GLGB_FELCA (Q6T308) 1,4-alpha-glucan branching enzyme (EC 2.4.1.18) (Glycogen| branching enzyme) (Brancher enzyme) Length = 699 Score = 29.6 bits (65), Expect = 9.1 Identities = 12/30 (40%), Positives = 18/30 (60%) Frame = +2 Query: 293 PSLASRLTQPGIGFPVNLVLRSSVKWLQFL 382 P+L S ++Q G+GF L + KW+Q L Sbjct: 415 PALCSPISQGGVGFDYRLAMAIPDKWIQLL 444 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 93,253,748 Number of Sequences: 219361 Number of extensions: 1886334 Number of successful extensions: 4487 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 4359 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4483 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6882837918 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)