ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd21o13
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1RL39_ORYSA (P51426) 60S ribosomal protein L39 109 2e-24
2RL39_MAIZE (P51425) 60S ribosomal protein L39 109 2e-24
3RL39_ARATH (P51424) 60S ribosomal protein L39 100 6e-22
4RL39_CANAL (Q96W55) 60S ribosomal protein L39 (L46) 93 1e-19
5RL39_ICTPU (Q90YS9) 60S ribosomal protein L39 91 5e-19
6RL39_CHICK (Q98TF5) 60S ribosomal protein L39 90 1e-18
7RL39_RAT (P62893) 60S ribosomal protein L39 90 1e-18
8RL39_MOUSE (P62892) 60S ribosomal protein L39 90 1e-18
9RL39_HUMAN (P62891) 60S ribosomal protein L39 90 1e-18
10RL39_SPOFR (Q962S4) 60S ribosomal protein L39 89 2e-18
11RL39_PLUXY (Q6F482) 60S ribosomal protein L39 89 2e-18
12RL39_DEBHA (Q6BHV8) 60S ribosomal protein L39 89 3e-18
13RL39_DROME (O16130) 60S ribosomal protein L39 (Ribosomal protein... 88 6e-18
14RL39_SCHPO (P05767) 60S ribosomal protein L39 (YL36) 87 1e-17
15RL39_ASHGO (Q758D8) 60S ribosomal protein L39 82 2e-16
16RL39_YEAST (P04650) 60S ribosomal protein L39 (L46) (YL40) 82 4e-16
17RL39L_HUMAN (Q96EH5) 60S ribosomal protein L39-like (L39-2) 82 4e-16
18RL39_KLUMA (P48536) 60S ribosomal protein L39 (L46) 79 3e-15
19RL39_KLULA (Q6CW22) 60S ribosomal protein L39 79 3e-15
20RL39_CAEEL (P52814) 60S ribosomal protein L39 78 6e-15
21RL39_PYRKO (Q5JGT6) 50S ribosomal protein L39e 53 2e-07
22RL39_PYRHO (P59473) 50S ribosomal protein L39e 53 2e-07
23RL39_ARCFU (O28212) 50S ribosomal protein L39e 52 3e-07
24RL39_PYRAB (Q9UYI8) 50S ribosomal protein L39e 52 4e-07
25RL39_AERPE (P59472) 50S ribosomal protein L39e 52 4e-07
26RL39_METTH (O27650) 50S ribosomal protein L39e 51 6e-07
27RL39_PYRFU (Q8U3S6) 50S ribosomal protein L39e 49 4e-06
28RL39_HALMA (P22452) 50S ribosomal protein L39e (Hl39e) (Hl46e) 48 5e-06
29RL39_ENCCU (Q8SQP8) 60S ribosomal protein L39 48 6e-06
30RL39_SULSO (Q980F9) 50S ribosomal protein L39e 47 8e-06
31RL39_SULAC (P13005) 50S ribosomal protein L39e (L46e) 47 8e-06
32RL39_HALSA (Q9HMM9) 50S ribosomal protein L39e 47 8e-06
33RL39_PICTO (Q6L2L2) 50S ribosomal protein L39e 46 2e-05
34RL39_METKA (Q8TUY3) 50S ribosomal protein L39e 45 3e-05
35RL39_SULTO (Q971I1) 50S ribosomal protein L39e 45 4e-05
36RL39_THEVO (Q97CU2) 50S ribosomal protein L39e 45 5e-05
37RL39_METJA (P54056) 50S ribosomal protein L39e 45 5e-05
38RL39_THEAC (Q9HM18) 50S ribosomal protein L39e 44 7e-05
39RL39_METAC (Q8TIN2) 50S ribosomal protein L39e 44 7e-05
40RL39_METMA (Q8PYQ5) 50S ribosomal protein L39e 42 3e-04
41RL39_METMP (Q6M0V9) 50S ribosomal protein L39e 41 8e-04
42RL39_PYRAE (Q8ZTX6) 50S ribosomal protein L39e 39 0.004
43PHYD_ARATH (P42497) Phytochrome D 30 1.8
44PPCK_STRCO (Q93JL5) Phosphoenolpyruvate carboxykinase [GTP] (EC ... 28 5.3
45Y045_METTH (O26151) UPF0103 protein MTH45 28 6.9
46TULP2_MOUSE (P46686) Tubby-related protein 2 (Tubby-like protein... 27 9.0
47Y2163_STRP8 (Q8NZ37) UPF0246 protein spyM18_2163 27 9.0
48Y1787_STRP6 (Q5X9J1) UPF0246 protein M6_Spy1787 27 9.0
49OPGG_RALSO (Q8XVC3) Glucans biosynthesis protein G precursor 27 9.0 
>RL39_ORYSA (P51426) 60S ribosomal protein L39|
          Length = 51

 Score =  109 bits (272), Expect = 2e-24
 Identities = 49/51 (96%), Positives = 50/51 (98%)
 Frame = -1

Query: 356 MPSHKTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 204
           MPSHKTFRIK+KLAKK RQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF
Sbjct: 1   MPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 51
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>RL39_MAIZE (P51425) 60S ribosomal protein L39|
          Length = 51

 Score =  109 bits (272), Expect = 2e-24
 Identities = 49/51 (96%), Positives = 50/51 (98%)
 Frame = -1

Query: 356 MPSHKTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 204
           MPSHKTFRIK+KLAKK RQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF
Sbjct: 1   MPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 51
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>RL39_ARATH (P51424) 60S ribosomal protein L39|
          Length = 51

 Score =  100 bits (250), Expect = 6e-22
 Identities = 44/51 (86%), Positives = 48/51 (94%)
 Frame = -1

Query: 356 MPSHKTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 204
           MPSHK+F IK+KL KK RQNRPIP+WIR+RTDNTIRYNAKRRHWRRTKLGF
Sbjct: 1   MPSHKSFMIKKKLGKKMRQNRPIPHWIRLRTDNTIRYNAKRRHWRRTKLGF 51
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>RL39_CANAL (Q96W55) 60S ribosomal protein L39 (L46)|
          Length = 51

 Score = 93.2 bits (230), Expect = 1e-19
 Identities = 41/50 (82%), Positives = 45/50 (90%)
 Frame = -1

Query: 356 MPSHKTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLG 207
           MPS K+FR KQKLAK Q+QNRP+P WIR+RTDN IRYNAKRRHWRRTKLG
Sbjct: 1   MPSQKSFRTKQKLAKAQKQNRPLPQWIRLRTDNKIRYNAKRRHWRRTKLG 50
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>RL39_ICTPU (Q90YS9) 60S ribosomal protein L39|
          Length = 51

 Score = 91.3 bits (225), Expect = 5e-19
 Identities = 41/50 (82%), Positives = 45/50 (90%)
 Frame = -1

Query: 356 MPSHKTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLG 207
           M SHKTFRIK+ LAKKQ+QNRPIP WIRM+T N IRYN+KRRHWRRTKLG
Sbjct: 1   MASHKTFRIKRFLAKKQKQNRPIPQWIRMKTGNKIRYNSKRRHWRRTKLG 50
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>RL39_CHICK (Q98TF5) 60S ribosomal protein L39|
          Length = 51

 Score = 90.1 bits (222), Expect = 1e-18
 Identities = 40/50 (80%), Positives = 45/50 (90%)
 Frame = -1

Query: 356 MPSHKTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLG 207
           M SHKTF+IK+ LAKKQ+QNRPIP WIRM+T N IRYN+KRRHWRRTKLG
Sbjct: 1   MSSHKTFKIKRFLAKKQKQNRPIPQWIRMKTGNKIRYNSKRRHWRRTKLG 50
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>RL39_RAT (P62893) 60S ribosomal protein L39|
          Length = 50

 Score = 89.7 bits (221), Expect = 1e-18
 Identities = 40/48 (83%), Positives = 44/48 (91%)
 Frame = -1

Query: 350 SHKTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLG 207
           SHKTFRIK+ LAKKQ+QNRPIP WIRM+T N IRYN+KRRHWRRTKLG
Sbjct: 2   SHKTFRIKRFLAKKQKQNRPIPQWIRMKTGNKIRYNSKRRHWRRTKLG 49
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>RL39_MOUSE (P62892) 60S ribosomal protein L39|
          Length = 50

 Score = 89.7 bits (221), Expect = 1e-18
 Identities = 40/48 (83%), Positives = 44/48 (91%)
 Frame = -1

Query: 350 SHKTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLG 207
           SHKTFRIK+ LAKKQ+QNRPIP WIRM+T N IRYN+KRRHWRRTKLG
Sbjct: 2   SHKTFRIKRFLAKKQKQNRPIPQWIRMKTGNKIRYNSKRRHWRRTKLG 49
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>RL39_HUMAN (P62891) 60S ribosomal protein L39|
          Length = 50

 Score = 89.7 bits (221), Expect = 1e-18
 Identities = 40/48 (83%), Positives = 44/48 (91%)
 Frame = -1

Query: 350 SHKTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLG 207
           SHKTFRIK+ LAKKQ+QNRPIP WIRM+T N IRYN+KRRHWRRTKLG
Sbjct: 2   SHKTFRIKRFLAKKQKQNRPIPQWIRMKTGNKIRYNSKRRHWRRTKLG 49
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>RL39_SPOFR (Q962S4) 60S ribosomal protein L39|
          Length = 51

 Score = 89.4 bits (220), Expect = 2e-18
 Identities = 40/49 (81%), Positives = 44/49 (89%)
 Frame = -1

Query: 356 MPSHKTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKL 210
           M +HKTF IK+KLAKK +QNRPIP W+RMRT NTIRYNAKRRHWRRTKL
Sbjct: 1   MSAHKTFIIKRKLAKKLKQNRPIPQWVRMRTGNTIRYNAKRRHWRRTKL 49
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>RL39_PLUXY (Q6F482) 60S ribosomal protein L39|
          Length = 51

 Score = 89.4 bits (220), Expect = 2e-18
 Identities = 40/49 (81%), Positives = 44/49 (89%)
 Frame = -1

Query: 356 MPSHKTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKL 210
           M +HKTF IK+KLAKK +QNRPIP W+RMRT NTIRYNAKRRHWRRTKL
Sbjct: 1   MSAHKTFIIKRKLAKKLKQNRPIPQWVRMRTGNTIRYNAKRRHWRRTKL 49
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>RL39_DEBHA (Q6BHV8) 60S ribosomal protein L39|
          Length = 51

 Score = 89.0 bits (219), Expect = 3e-18
 Identities = 39/49 (79%), Positives = 44/49 (89%)
 Frame = -1

Query: 356 MPSHKTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKL 210
           MPS K+FR KQKLAK Q+QNRP+P WIR+R+ NTIRYNAKRRHWRRTKL
Sbjct: 1   MPSQKSFRTKQKLAKAQKQNRPLPQWIRLRSGNTIRYNAKRRHWRRTKL 49
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>RL39_DROME (O16130) 60S ribosomal protein L39 (Ribosomal protein 46)|
          Length = 51

 Score = 87.8 bits (216), Expect = 6e-18
 Identities = 38/49 (77%), Positives = 44/49 (89%)
 Frame = -1

Query: 356 MPSHKTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKL 210
           M +HK+FRIKQKLAKK +QNR +P W+R+RT NTIRYNAKRRHWRRTKL
Sbjct: 1   MAAHKSFRIKQKLAKKLKQNRSVPQWVRLRTGNTIRYNAKRRHWRRTKL 49
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>RL39_SCHPO (P05767) 60S ribosomal protein L39 (YL36)|
          Length = 50

 Score = 87.0 bits (214), Expect = 1e-17
 Identities = 38/48 (79%), Positives = 41/48 (85%)
 Frame = -1

Query: 353 PSHKTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKL 210
           PSHK+FR KQKLAK  RQNRPIP WIR+RT NT+ YN KRRHWRRTKL
Sbjct: 1   PSHKSFRTKQKLAKAARQNRPIPQWIRLRTGNTVHYNMKRRHWRRTKL 48
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>RL39_ASHGO (Q758D8) 60S ribosomal protein L39|
          Length = 50

 Score = 82.4 bits (202), Expect = 2e-16
 Identities = 34/46 (73%), Positives = 42/46 (91%)
 Frame = -1

Query: 344 KTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLG 207
           K+F+IKQKLAK + QNRP+P W R++T+NTIRYNAKRRHWRRTK+G
Sbjct: 4   KSFKIKQKLAKAKNQNRPLPQWFRLKTNNTIRYNAKRRHWRRTKMG 49
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>RL39_YEAST (P04650) 60S ribosomal protein L39 (L46) (YL40)|
          Length = 50

 Score = 81.6 bits (200), Expect = 4e-16
 Identities = 34/47 (72%), Positives = 44/47 (93%)
 Frame = -1

Query: 350 SHKTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKL 210
           + K+FRIKQK+AK ++QNRP+P WIR+RT+NTIRYNAKRR+WRRTK+
Sbjct: 2   AQKSFRIKQKMAKAKKQNRPLPQWIRLRTNNTIRYNAKRRNWRRTKM 48
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>RL39L_HUMAN (Q96EH5) 60S ribosomal protein L39-like (L39-2)|
          Length = 50

 Score = 81.6 bits (200), Expect = 4e-16
 Identities = 36/48 (75%), Positives = 42/48 (87%)
 Frame = -1

Query: 350 SHKTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLG 207
           SHKTF IK+ LAKKQ+QNRPIP WI+M+  + IRYN+KRRHWRRTKLG
Sbjct: 2   SHKTFTIKRFLAKKQKQNRPIPQWIQMKPGSKIRYNSKRRHWRRTKLG 49
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>RL39_KLUMA (P48536) 60S ribosomal protein L39 (L46)|
          Length = 50

 Score = 79.0 bits (193), Expect = 3e-15
 Identities = 34/45 (75%), Positives = 40/45 (88%)
 Frame = -1

Query: 344 KTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKL 210
           K+F IKQKLAK + QNRP+P W R++T+NTIRYNAKRRHWRRTKL
Sbjct: 4   KSFIIKQKLAKAKNQNRPLPQWFRLKTNNTIRYNAKRRHWRRTKL 48
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>RL39_KLULA (Q6CW22) 60S ribosomal protein L39|
          Length = 50

 Score = 78.6 bits (192), Expect = 3e-15
 Identities = 34/46 (73%), Positives = 40/46 (86%)
 Frame = -1

Query: 344 KTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLG 207
           K+F IKQKLAK + QNRP+P W R++T+N IRYNAKRRHWRRTKLG
Sbjct: 4   KSFIIKQKLAKAKNQNRPLPQWYRLKTNNKIRYNAKRRHWRRTKLG 49
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>RL39_CAEEL (P52814) 60S ribosomal protein L39|
          Length = 51

 Score = 77.8 bits (190), Expect = 6e-15
 Identities = 34/49 (69%), Positives = 42/49 (85%)
 Frame = -1

Query: 356 MPSHKTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKL 210
           M + K   IK+KLAKKQ+QNRP+P W+RM+T NT++YNAKRRHWRRTKL
Sbjct: 1   MSALKKSFIKRKLAKKQKQNRPMPQWVRMKTGNTMKYNAKRRHWRRTKL 49
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>RL39_PYRKO (Q5JGT6) 50S ribosomal protein L39e|
          Length = 51

 Score = 53.1 bits (126), Expect = 2e-07
 Identities = 23/49 (46%), Positives = 33/49 (67%)
 Frame = -1

Query: 356 MPSHKTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKL 210
           M  +K F  K +LAK  +QNR +P W+ ++T+  +  + KRRHWRRTKL
Sbjct: 1   MARNKPFAKKLRLAKAAKQNRRVPVWVIVKTNRKVITHPKRRHWRRTKL 49
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>RL39_PYRHO (P59473) 50S ribosomal protein L39e|
          Length = 51

 Score = 52.8 bits (125), Expect = 2e-07
 Identities = 23/49 (46%), Positives = 32/49 (65%)
 Frame = -1

Query: 356 MPSHKTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKL 210
           M  +K    K +LAK  +QNR +P W+ +RT+  +  + KRRHWRRTKL
Sbjct: 1   MARNKPLAKKLRLAKAMKQNRRVPVWVIVRTNRRVLTHPKRRHWRRTKL 49
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>RL39_ARCFU (O28212) 50S ribosomal protein L39e|
          Length = 50

 Score = 52.0 bits (123), Expect = 3e-07
 Identities = 22/45 (48%), Positives = 32/45 (71%)
 Frame = -1

Query: 344 KTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKL 210
           KT  +K++LAK  +QNR  P WI ++T  ++  + KRRHWRR+KL
Sbjct: 4   KTVGVKKRLAKAYKQNRRAPVWITVKTKRSVFGSPKRRHWRRSKL 48
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>RL39_PYRAB (Q9UYI8) 50S ribosomal protein L39e|
          Length = 51

 Score = 51.6 bits (122), Expect = 4e-07
 Identities = 22/49 (44%), Positives = 32/49 (65%)
 Frame = -1

Query: 356 MPSHKTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKL 210
           M  +K    K +LAK  +QNR +P W+ ++T+  +  + KRRHWRRTKL
Sbjct: 1   MARNKPLAKKLRLAKAMKQNRRVPVWVIVKTNRRVLTHPKRRHWRRTKL 49
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>RL39_AERPE (P59472) 50S ribosomal protein L39e|
          Length = 51

 Score = 51.6 bits (122), Expect = 4e-07
 Identities = 23/49 (46%), Positives = 31/49 (63%)
 Frame = -1

Query: 356 MPSHKTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKL 210
           M  +K    K +LA+  + NR IP W+ +RT   IR+N  RRHWRR+KL
Sbjct: 1   MARNKPLGRKLRLARALKSNRAIPVWVVIRTSRRIRFNLLRRHWRRSKL 49
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>RL39_METTH (O27650) 50S ribosomal protein L39e|
          Length = 51

 Score = 51.2 bits (121), Expect = 6e-07
 Identities = 22/49 (44%), Positives = 32/49 (65%)
 Frame = -1

Query: 356 MPSHKTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKL 210
           M  +K    K ++AK  RQNR +P W+ ++T+  +R + K RHWRRTKL
Sbjct: 1   MSRNKHVARKLRMAKANRQNRRVPAWVMVKTNYRVRSHPKMRHWRRTKL 49
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>RL39_PYRFU (Q8U3S6) 50S ribosomal protein L39e|
          Length = 51

 Score = 48.5 bits (114), Expect = 4e-06
 Identities = 21/49 (42%), Positives = 32/49 (65%)
 Frame = -1

Query: 356 MPSHKTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKL 210
           M  +K    K +LAK  +QNR +P W+ ++T+  +  + KRR+WRRTKL
Sbjct: 1   MARNKPLAKKLRLAKALKQNRRVPVWVIVKTNRRVLTHPKRRYWRRTKL 49
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>RL39_HALMA (P22452) 50S ribosomal protein L39e (Hl39e) (Hl46e)|
          Length = 49

 Score = 48.1 bits (113), Expect = 5e-06
 Identities = 19/42 (45%), Positives = 28/42 (66%)
 Frame = -1

Query: 344 KTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRR 219
           K+   K++LAK   QN  +P W+ ++TD  ++ N KRRHWRR
Sbjct: 3   KSKATKKRLAKLDNQNSRVPAWVMLKTDREVQRNHKRRHWRR 44
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>RL39_ENCCU (Q8SQP8) 60S ribosomal protein L39|
          Length = 52

 Score = 47.8 bits (112), Expect = 6e-06
 Identities = 22/49 (44%), Positives = 29/49 (59%)
 Frame = -1

Query: 356 MPSHKTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKL 210
           M S KT  +K +L +  ++NR IP W RM  ++   YN  RRHWR  KL
Sbjct: 1   MGSRKTALVKTRLMRALKRNREIPAWKRMMKEHKGEYNRARRHWRSKKL 49
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>RL39_SULSO (Q980F9) 50S ribosomal protein L39e|
          Length = 51

 Score = 47.4 bits (111), Expect = 8e-06
 Identities = 22/49 (44%), Positives = 29/49 (59%)
 Frame = -1

Query: 356 MPSHKTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKL 210
           M  +K    K +LAK  + N PIP WI ++T   +RYN  RR+WRR  L
Sbjct: 1   MSRNKPVAKKFRLAKALKANSPIPIWIVLKTRGRVRYNPLRRNWRRNDL 49
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>RL39_SULAC (P13005) 50S ribosomal protein L39e (L46e)|
          Length = 50

 Score = 47.4 bits (111), Expect = 8e-06
 Identities = 20/46 (43%), Positives = 29/46 (63%)
 Frame = -1

Query: 347 HKTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKL 210
           HK+   K +L K  ++N PIP W+ ++T   IR+N  RR+WRR  L
Sbjct: 3   HKSLGKKLRLGKALKRNSPIPAWVIIKTQAEIRFNPLRRNWRRNNL 48
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>RL39_HALSA (Q9HMM9) 50S ribosomal protein L39e|
          Length = 49

 Score = 47.4 bits (111), Expect = 8e-06
 Identities = 18/37 (48%), Positives = 28/37 (75%)
 Frame = -1

Query: 329 KQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRR 219
           K++LAK +RQN  +P W+ M+T+  ++ N KRR+WRR
Sbjct: 8   KKRLAKLERQNSRVPAWVMMKTNRDVQRNPKRRNWRR 44
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>RL39_PICTO (Q6L2L2) 50S ribosomal protein L39e|
          Length = 51

 Score = 46.2 bits (108), Expect = 2e-05
 Identities = 19/49 (38%), Positives = 30/49 (61%)
 Frame = -1

Query: 356 MPSHKTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKL 210
           M  +K   +K +L K  + NR +P W+ ++TD  +  N KRR+WRR+ L
Sbjct: 1   MARNKPLGLKIRLMKAVKSNRRVPGWVMVKTDRRVTQNYKRRNWRRSNL 49
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>RL39_METKA (Q8TUY3) 50S ribosomal protein L39e|
          Length = 51

 Score = 45.4 bits (106), Expect = 3e-05
 Identities = 19/40 (47%), Positives = 27/40 (67%)
 Frame = -1

Query: 329 KQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKL 210
           K ++AK  +QNR +P W+  +T   +  N KRRHWRR+KL
Sbjct: 10  KLRMAKAIKQNRRVPPWVVAKTGGRVIDNPKRRHWRRSKL 49
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>RL39_SULTO (Q971I1) 50S ribosomal protein L39e|
          Length = 51

 Score = 45.1 bits (105), Expect = 4e-05
 Identities = 19/49 (38%), Positives = 28/49 (57%)
 Frame = -1

Query: 356 MPSHKTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKL 210
           M  +K    K +LA+  + N P+P W+ ++T+   RYN  RR WRR  L
Sbjct: 1   MSKNKPLGRKLRLARALKSNSPVPAWVIIKTNGKFRYNFHRRDWRRNDL 49
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>RL39_THEVO (Q97CU2) 50S ribosomal protein L39e|
          Length = 51

 Score = 44.7 bits (104), Expect = 5e-05
 Identities = 21/49 (42%), Positives = 28/49 (57%)
 Frame = -1

Query: 356 MPSHKTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKL 210
           M  +K    K +L KK +QNR +P W+ MRT   +  N  RR+WRR  L
Sbjct: 1   MSRNKELGRKIRLMKKVKQNRRVPGWVMMRTARKVTQNPLRRNWRRGNL 49
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>RL39_METJA (P54056) 50S ribosomal protein L39e|
          Length = 51

 Score = 44.7 bits (104), Expect = 5e-05
 Identities = 20/49 (40%), Positives = 32/49 (65%)
 Frame = -1

Query: 356 MPSHKTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKL 210
           M S+K    K +LAK  +QNR +P ++ ++T   +R++ K R+WRR KL
Sbjct: 1   MGSNKPLGKKVRLAKALKQNRRVPLFVIVKTRGRVRFHPKMRYWRRKKL 49
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>RL39_THEAC (Q9HM18) 50S ribosomal protein L39e|
          Length = 51

 Score = 44.3 bits (103), Expect = 7e-05
 Identities = 21/49 (42%), Positives = 28/49 (57%)
 Frame = -1

Query: 356 MPSHKTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKL 210
           M  +K    K +L KK +QNR +P W+ MRT   +  N  RR+WRR  L
Sbjct: 1   MSRNKELGRKIRLMKKIKQNRRVPGWVMMRTARKVTQNPLRRNWRRGSL 49
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>RL39_METAC (Q8TIN2) 50S ribosomal protein L39e|
          Length = 51

 Score = 44.3 bits (103), Expect = 7e-05
 Identities = 18/47 (38%), Positives = 29/47 (61%)
 Frame = -1

Query: 350 SHKTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKL 210
           SH     K++LAK  +QN  +P W+ ++T+  +  + +RRHWRR  L
Sbjct: 2   SHNMKGQKKRLAKAHKQNTRVPVWVIVKTNRKVVSHPRRRHWRRRSL 48
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>RL39_METMA (Q8PYQ5) 50S ribosomal protein L39e|
          Length = 51

 Score = 42.4 bits (98), Expect = 3e-04
 Identities = 18/47 (38%), Positives = 28/47 (59%)
 Frame = -1

Query: 350 SHKTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKL 210
           SH     K++LAK  +QN  +P W  ++T+  +  + +RRHWRR  L
Sbjct: 2   SHNMKGQKKRLAKAHKQNSRVPVWAIVKTNRKVVSHPRRRHWRRGSL 48
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>RL39_METMP (Q6M0V9) 50S ribosomal protein L39e|
          Length = 51

 Score = 40.8 bits (94), Expect = 8e-04
 Identities = 19/49 (38%), Positives = 28/49 (57%)
 Frame = -1

Query: 356 MPSHKTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKL 210
           M  +K    K +LAK  +QNR +P +   RT  +++ + K RHWRR  L
Sbjct: 1   MAGNKPLGKKIRLAKALKQNRRVPMFAIARTKGSVKQHPKMRHWRRKNL 49
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>RL39_PYRAE (Q8ZTX6) 50S ribosomal protein L39e|
          Length = 51

 Score = 38.5 bits (88), Expect = 0.004
 Identities = 18/49 (36%), Positives = 26/49 (53%)
 Frame = -1

Query: 356 MPSHKTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKL 210
           M  +K    K +LA   + NR  P W+ ++T   +  +  RRHWRR KL
Sbjct: 1   MARNKPLGKKLRLAAAFKXNRNPPVWVVVKTKRRVTRSPARRHWRRVKL 49
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>PHYD_ARATH (P42497) Phytochrome D|
          Length = 1164

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 16/59 (27%), Positives = 24/59 (40%)
 Frame = -1

Query: 296 RPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF*AGDEDDGSRRCRREKGLGYLGFIMSRC 120
           R   +W R  T+  I++   + H           D+DDG R   R     +L  + SRC
Sbjct: 551 RDFLFWFRSHTEKEIKWGGAKHH---------PEDKDDGQRMNPRSSFQTFLEVVKSRC 600
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>PPCK_STRCO (Q93JL5) Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32) (PEP|
           carboxykinase) (Phosphoenolpyruvate carboxylase) (PEPCK)
          Length = 609

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = -3

Query: 189 GRWLPSLPTGEGSRVPRVYYVSLFLKD 109
           G W+      + S++P++YYV+ F KD
Sbjct: 482 GHWVDVAKDKDQSKLPKIYYVNWFRKD 508
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>Y045_METTH (O26151) UPF0103 protein MTH45|
          Length = 277

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
 Frame = +3

Query: 198 CLESELGAAPVPALGVVP--DGVVGPHA 275
           C E ELG   +PA+G +    GV+ PHA
Sbjct: 26  CFEHELGPGTLPAVGSMRRIKGVIAPHA 53
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>TULP2_MOUSE (P46686) Tubby-related protein 2 (Tubby-like protein 2) (P4-6|
           protein) (Fragment)
          Length = 564

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = -1

Query: 329 KQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRR 231
           +Q   KKQR+ R  P  ++   D T+R+   RR
Sbjct: 43  RQLFEKKQRRKRQEPLMVQANPDATLRHRRPRR 75
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>Y2163_STRP8 (Q8NZ37) UPF0246 protein spyM18_2163|
          Length = 243

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 7/52 (13%)
 Frame = -1

Query: 344 KTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKR-------RHWRRTKL 210
           K++RIK++ AKK++Q      W  M +  ++ Y A +       RH +R KL
Sbjct: 44  KSYRIKEEAAKKEQQR-----WQDMASQQSLAYPAYQLFNGLMYRHIKRDKL 90
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>Y1787_STRP6 (Q5X9J1) UPF0246 protein M6_Spy1787|
          Length = 243

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 7/52 (13%)
 Frame = -1

Query: 344 KTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKR-------RHWRRTKL 210
           K++RIK++ AKK++Q      W  M +  ++ Y A +       RH +R KL
Sbjct: 44  KSYRIKEEAAKKEQQR-----WQDMASQQSLAYPAYQLFNGLMYRHIKRDKL 90
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>OPGG_RALSO (Q8XVC3) Glucans biosynthesis protein G precursor|
          Length = 504

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
 Frame = -1

Query: 326 QKLAKKQRQNRP--IPYWIR-MRTDN--TIRYNAKRRHWRRTKLGF*AGDEDDGS 177
           ++LA K  Q  P  +P+ +R +R D    IR+ + + +WRR KL F  G   +GS
Sbjct: 29  KQLAAKPYQAPPDTLPHELRELRYDQYREIRFKSDQAYWRRDKLPFELGFFHEGS 83


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,545,224
Number of Sequences: 219361
Number of extensions: 645064
Number of successful extensions: 1683
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 1642
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1683
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 1365190992
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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