ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd21o12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_191221.1| Oryza sativa (japonica cultivar-group), predic... 143 9e-31
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 143 9e-31
3dbj|AP003076.3| Oryza sativa (japonica cultivar-group) genomic D... 143 9e-31
4dbj|AK103775.1| Oryza sativa (japonica cultivar-group) cDNA clon... 143 9e-31
5dbj|AK102455.1| Oryza sativa (japonica cultivar-group) cDNA clon... 143 9e-31
6dbj|AK067731.1| Oryza sativa (japonica cultivar-group) cDNA clon... 143 9e-31
7dbj|AK064990.1| Oryza sativa (japonica cultivar-group) cDNA clon... 143 9e-31
8gb|AY108498.1| Zea mays PCO093951 mRNA sequence 121 3e-24
9ref|XM_475716.1| Oryza sativa (japonica cultivar-group), predic... 80 1e-11
10gb|AC130603.2| Oryza sativa (japonica cultivar-group) chromosome... 80 1e-11
11dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 80 1e-11
12dbj|AK072066.1| Oryza sativa (japonica cultivar-group) cDNA clon... 80 1e-11
13gb|AF483209.1| Solanum tuberosum putative trehalose synthase (St... 50 0.010
14gb|AC183492.1| Brassica oleracea Contig G, complete sequence 50 0.010
15ref|NM_100521.1| Arabidopsis thaliana ATTPS7; transferase, trans... 48 0.038
16gb|AC068143.4|T2D23 Sequence of BAC T2D23 from Arabidopsis thali... 48 0.038
17ref|NM_117886.2| Arabidopsis thaliana ATTPS5; transferase, trans... 44 0.60
18ref|NM_105697.2| Arabidopsis thaliana ATTPS8; transferase, trans... 44 0.60
19gb|AC102595.9| Mus musculus chromosome 10, clone RP23-360M11, co... 44 0.60
20gb|AC124704.4| Mus musculus BAC clone RP23-480H24 from chromosom... 44 0.60
21emb|Z97344.2|ATFCA9 Arabidopsis thaliana DNA chromosome 4, ESSA ... 44 0.60
22gb|AC163031.5| Mus musculus BAC clone RP24-146A18 from chromosom... 44 0.60
23emb|AL161547.2|ATCHRIV47 Arabidopsis thaliana DNA chromosome 4, ... 44 0.60
24dbj|AK221368.1| Arabidopsis thaliana mRNA for trehalose-6-phosph... 44 0.60
25gb|AC158599.7| Mus musculus 10 BAC RP23-122O12 (Roswell Park Can... 44 0.60
26emb|BX827855.1|CNS0A49N Arabidopsis thaliana Full-length cDNA Co... 44 0.60
27gb|BT005967.1| Arabidopsis thaliana At4g17770 gene, complete cds 44 0.60
28gb|AY089209.1| Arabidopsis thaliana clone 95947 mRNA, complete s... 44 0.60
29gb|AF155150.1| Arabidopsis thaliana trehalose-6-phosphate syntha... 44 0.60
30dbj|AK118703.1| Arabidopsis thaliana At4g17770 mRNA for putative... 44 0.60
31gb|AC003671.1|F17O7 Arabidopsis thaliana chromosome 1 BAC F17O7 ... 44 0.60
32gb|AC130677.12| Mus musculus chromosome 7, clone RP24-529F12, co... 42 2.4
33gb|AC123066.4| Mus musculus BAC clone RP23-262I13 from chromosom... 42 2.4
34gb|AC122242.2| Mus musculus BAC clone RP23-147P2 from chromosome... 42 2.4
35gb|AC132389.3| Mus musculus BAC clone RP23-448A4 from chromosome... 42 2.4
36emb|AL358949.16| Human DNA sequence from clone RP11-302K6 on chr... 42 2.4
37gb|AC102383.7| Mus musculus chromosome 1, clone RP24-312K8, comp... 42 2.4
38gb|AC151574.2| Mus musculus BAC clone RP23-430A4 from 7, complet... 42 2.4
39ref|NM_102235.2| Arabidopsis thaliana ATTPS9; transferase, trans... 40 9.3
40gb|AF412833.1| Danio rerio mismatch repair protein Msh2 (msh2) m... 40 9.3
41gb|AE017263.1| Mesoplasma florum L1 complete genome 40 9.3
42gb|AC161490.7| Mus musculus chromosome 7, clone RP23-307M23, com... 40 9.3
43gb|AC139240.4| Mus musculus BAC clone RP24-128J14 from chromosom... 40 9.3
44gb|AC132351.3| Mus musculus BAC clone RP24-95F24 from chromosome... 40 9.3
45gb|AC103810.5| Homo sapiens chromosome 17, clone RP11-927P21, co... 40 9.3
46emb|AL359438.19| Human DNA sequence from clone RP11-261A1 on chr... 40 9.3
47emb|Z97211.2|SPBC2F12 S.pombe chromosome II cosmid c2F12 40 9.3
48gb|AY096366.1| Arabidopsis thaliana putative trehalose 6-phospha... 40 9.3
49gb|AY072210.1| Arabidopsis thaliana putative trehalose 6-phospha... 40 9.3
50gb|AC159305.3| Mus musculus BAC clone RP23-205D10 from chromosom... 40 9.3
51emb|AL808125.11| Mouse DNA sequence from clone RP23-193L22 on ch... 40 9.3
52gb|DP000059.1| Carollia perspicillata target 117 genomic scaffold 40 9.3
53dbj|AK134020.1| Mus musculus adult male thymus cDNA, RIKEN full-... 40 9.3
54gb|AY075650.1| Arabidopsis thaliana At1g23880/T23E23_8 mRNA, com... 40 9.3
55gb|AC023136.6| Homo sapiens BAC clone RP11-497K21 from 4, comple... 40 9.3
56ref|XM_697605.1| PREDICTED: Danio rerio hypothetical protein LOC... 40 9.3
57dbj|AK048469.1| Mus musculus 16 days embryo head cDNA, RIKEN ful... 40 9.3
58gb|AC091132.16| Homo sapiens chromosome 17, clone RP11-798G7, co... 40 9.3
59gb|AC002423.3|AC002423 Genomic sequence for Arabidopsis thaliana... 40 9.3
60gb|AC092855.39| Mus musculus strain C57BL/6J chromosome 3 clone ... 40 9.3
61gb|AE014299.1| Shewanella oneidensis MR-1, complete genome 40 9.3
62gb|AC174446.2| Mus musculus BAC clone RP23-356N23 from chromosom... 40 9.3
63gb|AC003663.1|AC003663 Homo sapiens chromosome 17, clone HCIT87G... 40 9.3 
>ref|NM_191221.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2739

 Score =  143 bits (72), Expect = 9e-31
 Identities = 114/128 (89%)
 Strand = Plus / Minus

                                                                        
Query: 551  gcatccgccagcgcactcagcatggtggccacttcaaacgtatcatccaagtagaatttt 610
            ||||| ||||| || |||||||||||| ||||||||||||||||||||| ||| ||||| 
Sbjct: 2621 gcatctgccagtgcgctcagcatggtgaccacttcaaacgtatcatccaggtaaaatttg 2562

                                                                        
Query: 611  gctttgcttggtttttgtcccacagtgcatgcaaacaatggtgttttgggggcaaccata 670
            || ||||||||||||||||||||||||||||||||||||| ||| || |  |||||||||
Sbjct: 2561 gccttgcttggtttttgtcccacagtgcatgcaaacaatgatgtgtttgtagcaaccata 2502

                    
Query: 671  cccctttt 678
            ||| ||||
Sbjct: 2501 cccttttt 2494
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  143 bits (72), Expect = 9e-31
 Identities = 114/128 (89%)
 Strand = Plus / Plus

                                                                            
Query: 551      gcatccgccagcgcactcagcatggtggccacttcaaacgtatcatccaagtagaatttt 610
                ||||| ||||| || |||||||||||| ||||||||||||||||||||| ||| ||||| 
Sbjct: 31367270 gcatctgccagtgcgctcagcatggtgaccacttcaaacgtatcatccaggtaaaatttg 31367329

                                                                            
Query: 611      gctttgcttggtttttgtcccacagtgcatgcaaacaatggtgttttgggggcaaccata 670
                || ||||||||||||||||||||||||||||||||||||| ||| || |  |||||||||
Sbjct: 31367330 gccttgcttggtttttgtcccacagtgcatgcaaacaatgatgtgtttgtagcaaccata 31367389

                        
Query: 671      cccctttt 678
                ||| ||||
Sbjct: 31367390 cccttttt 31367397
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>dbj|AP003076.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0481E12
          Length = 161563

 Score =  143 bits (72), Expect = 9e-31
 Identities = 114/128 (89%)
 Strand = Plus / Plus

                                                                          
Query: 551    gcatccgccagcgcactcagcatggtggccacttcaaacgtatcatccaagtagaatttt 610
              ||||| ||||| || |||||||||||| ||||||||||||||||||||| ||| ||||| 
Sbjct: 121553 gcatctgccagtgcgctcagcatggtgaccacttcaaacgtatcatccaggtaaaatttg 121612

                                                                          
Query: 611    gctttgcttggtttttgtcccacagtgcatgcaaacaatggtgttttgggggcaaccata 670
              || ||||||||||||||||||||||||||||||||||||| ||| || |  |||||||||
Sbjct: 121613 gccttgcttggtttttgtcccacagtgcatgcaaacaatgatgtgtttgtagcaaccata 121672

                      
Query: 671    cccctttt 678
              ||| ||||
Sbjct: 121673 cccttttt 121680
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>dbj|AK103775.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033143P14, full
            insert sequence
          Length = 3039

 Score =  143 bits (72), Expect = 9e-31
 Identities = 114/128 (89%)
 Strand = Plus / Minus

                                                                        
Query: 551  gcatccgccagcgcactcagcatggtggccacttcaaacgtatcatccaagtagaatttt 610
            ||||| ||||| || |||||||||||| ||||||||||||||||||||| ||| ||||| 
Sbjct: 2854 gcatctgccagtgcgctcagcatggtgaccacttcaaacgtatcatccaggtaaaatttg 2795

                                                                        
Query: 611  gctttgcttggtttttgtcccacagtgcatgcaaacaatggtgttttgggggcaaccata 670
            || ||||||||||||||||||||||||||||||||||||| ||| || |  |||||||||
Sbjct: 2794 gccttgcttggtttttgtcccacagtgcatgcaaacaatgatgtgtttgtagcaaccata 2735

                    
Query: 671  cccctttt 678
            ||| ||||
Sbjct: 2734 cccttttt 2727
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>dbj|AK102455.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033094A19, full
            insert sequence
          Length = 3876

 Score =  143 bits (72), Expect = 9e-31
 Identities = 114/128 (89%)
 Strand = Plus / Minus

                                                                        
Query: 551  gcatccgccagcgcactcagcatggtggccacttcaaacgtatcatccaagtagaatttt 610
            ||||| ||||| || |||||||||||| ||||||||||||||||||||| ||| ||||| 
Sbjct: 2867 gcatctgccagtgcgctcagcatggtgaccacttcaaacgtatcatccaggtaaaatttg 2808

                                                                        
Query: 611  gctttgcttggtttttgtcccacagtgcatgcaaacaatggtgttttgggggcaaccata 670
            || ||||||||||||||||||||||||||||||||||||| ||| || |  |||||||||
Sbjct: 2807 gccttgcttggtttttgtcccacagtgcatgcaaacaatgatgtgtttgtagcaaccata 2748

                    
Query: 671  cccctttt 678
            ||| ||||
Sbjct: 2747 cccttttt 2740
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>dbj|AK067731.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116P06, full
            insert sequence
          Length = 3432

 Score =  143 bits (72), Expect = 9e-31
 Identities = 114/128 (89%)
 Strand = Plus / Minus

                                                                        
Query: 551  gcatccgccagcgcactcagcatggtggccacttcaaacgtatcatccaagtagaatttt 610
            ||||| ||||| || |||||||||||| ||||||||||||||||||||| ||| ||||| 
Sbjct: 2867 gcatctgccagtgcgctcagcatggtgaccacttcaaacgtatcatccaggtaaaatttg 2808

                                                                        
Query: 611  gctttgcttggtttttgtcccacagtgcatgcaaacaatggtgttttgggggcaaccata 670
            || ||||||||||||||||||||||||||||||||||||| ||| || |  |||||||||
Sbjct: 2807 gccttgcttggtttttgtcccacagtgcatgcaaacaatgatgtgtttgtagcaaccata 2748

                    
Query: 671  cccctttt 678
            ||| ||||
Sbjct: 2747 cccttttt 2740
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>dbj|AK064990.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001D09, full
            insert sequence
          Length = 3272

 Score =  143 bits (72), Expect = 9e-31
 Identities = 114/128 (89%)
 Strand = Plus / Minus

                                                                        
Query: 551  gcatccgccagcgcactcagcatggtggccacttcaaacgtatcatccaagtagaatttt 610
            ||||| ||||| || |||||||||||| ||||||||||||||||||||| ||| ||||| 
Sbjct: 2867 gcatctgccagtgcgctcagcatggtgaccacttcaaacgtatcatccaggtaaaatttg 2808

                                                                        
Query: 611  gctttgcttggtttttgtcccacagtgcatgcaaacaatggtgttttgggggcaaccata 670
            || ||||||||||||||||||||||||||||||||||||| ||| || |  |||||||||
Sbjct: 2807 gccttgcttggtttttgtcccacagtgcatgcaaacaatgatgtgtttgtagcaaccata 2748

                    
Query: 671  cccctttt 678
            ||| ||||
Sbjct: 2747 cccttttt 2740
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>gb|AY108498.1| Zea mays PCO093951 mRNA sequence
          Length = 1981

 Score =  121 bits (61), Expect = 3e-24
 Identities = 94/105 (89%)
 Strand = Plus / Minus

                                                                        
Query: 566  ctcagcatggtggccacttcaaacgtatcatccaagtagaattttgctttgcttggtttt 625
            |||||||| | | |||||||||| ||||| |||| ||||||||| |||||||||||||||
Sbjct: 1219 ctcagcatagcgaccacttcaaatgtatcgtccaggtagaatttggctttgcttggtttt 1160

                                                         
Query: 626  tgtcccacagtgcatgcaaacaatggtgttttgggggcaaccata 670
            ||||||||||||||||||||||||| |||| | || |||||||||
Sbjct: 1159 tgtcccacagtgcatgcaaacaatgatgttcttggagcaaccata 1115
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>ref|XM_475716.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2700

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 97/116 (83%)
 Strand = Plus / Minus

                                                                        
Query: 551  gcatccgccagcgcactcagcatggtggccacttcaaacgtatcatccaagtagaatttt 610
            ||||||||||| | ||||| ||||||| | |||||||| |||||||||| ||| ||  | 
Sbjct: 2585 gcatccgccagtgaactcaacatggtgacgacttcaaatgtatcatccaggtaaaaccta 2526

                                                                    
Query: 611  gctttgcttggtttttgtcccacagtgcatgcaaacaatggtgttttgggggcaac 666
            ||||||||||| || || |||||||| |||||||||| ||| ||||| || |||||
Sbjct: 2525 gctttgcttggcttctggcccacagtacatgcaaacagtggagtttttggtgcaac 2470
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>gb|AC130603.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1130G10,
             complete sequence
          Length = 143073

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 97/116 (83%)
 Strand = Plus / Minus

                                                                         
Query: 551   gcatccgccagcgcactcagcatggtggccacttcaaacgtatcatccaagtagaatttt 610
             ||||||||||| | ||||| ||||||| | |||||||| |||||||||| ||| ||  | 
Sbjct: 85714 gcatccgccagtgaactcaacatggtgacgacttcaaatgtatcatccaggtaaaaccta 85655

                                                                     
Query: 611   gctttgcttggtttttgtcccacagtgcatgcaaacaatggtgttttgggggcaac 666
             ||||||||||| || || |||||||| |||||||||| ||| ||||| || |||||
Sbjct: 85654 gctttgcttggcttctggcccacagtacatgcaaacagtggagtttttggtgcaac 85599
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 97/116 (83%)
 Strand = Plus / Minus

                                                                            
Query: 551      gcatccgccagcgcactcagcatggtggccacttcaaacgtatcatccaagtagaatttt 610
                ||||||||||| | ||||| ||||||| | |||||||| |||||||||| ||| ||  | 
Sbjct: 25445353 gcatccgccagtgaactcaacatggtgacgacttcaaatgtatcatccaggtaaaaccta 25445294

                                                                        
Query: 611      gctttgcttggtttttgtcccacagtgcatgcaaacaatggtgttttgggggcaac 666
                ||||||||||| || || |||||||| |||||||||| ||| ||||| || |||||
Sbjct: 25445293 gctttgcttggcttctggcccacagtacatgcaaacagtggagtttttggtgcaac 25445238
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>dbj|AK072066.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013110H22, full
            insert sequence
          Length = 3498

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 97/116 (83%)
 Strand = Plus / Minus

                                                                        
Query: 551  gcatccgccagcgcactcagcatggtggccacttcaaacgtatcatccaagtagaatttt 610
            ||||||||||| | ||||| ||||||| | |||||||| |||||||||| ||| ||  | 
Sbjct: 2760 gcatccgccagtgaactcaacatggtgacgacttcaaatgtatcatccaggtaaaaccta 2701

                                                                    
Query: 611  gctttgcttggtttttgtcccacagtgcatgcaaacaatggtgttttgggggcaac 666
            ||||||||||| || || |||||||| |||||||||| ||| ||||| || |||||
Sbjct: 2700 gctttgcttggcttctggcccacagtacatgcaaacagtggagtttttggtgcaac 2645
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>gb|AF483209.1| Solanum tuberosum putative trehalose synthase (StTS1) gene, exons 1
            through 4 and complete cds
          Length = 8590

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                 
Query: 593  tcatccaagtagaattttgctttgcttggtttttgtcccacagtgcatgcaaa 645
            |||||||||||  | ||||||||||| ||||||||||| || ||||| |||||
Sbjct: 7207 tcatccaagtaatactttgctttgctaggtttttgtccaactgtgcaagcaaa 7155
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>gb|AC183492.1| Brassica oleracea Contig G, complete sequence
          Length = 236640

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                  
Query: 593   tcatccaagtagaattttgctttgcttggtttttgtcccacagtgcatgcaaa 645
             |||||||| ||| |||| ||||| |||||||||||||| || ||||| |||||
Sbjct: 77267 tcatccaaatagtatttagcttttcttggtttttgtcctacggtgcaagcaaa 77215
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>ref|NM_100521.1| Arabidopsis thaliana ATTPS7; transferase, transferring glycosyl
            groups / trehalose-phosphatase AT1G06410 (ATTPS7) mRNA,
            complete cds
          Length = 3053

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                    
Query: 590  gtatcatccaagtagaattttgctttgcttggtttttgtcccacagtgcatgcaaa 645
            ||||| ||||||||| |||| || |||||||| ||||| || || |||||||||||
Sbjct: 2468 gtatcgtccaagtagtatttagccttgcttggcttttgcccaactgtgcatgcaaa 2413
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>gb|AC068143.4|T2D23 Sequence of BAC T2D23 from Arabidopsis thaliana chromosome 1, complete
             sequence
          Length = 41039

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                     
Query: 590   gtatcatccaagtagaattttgctttgcttggtttttgtcccacagtgcatgcaaa 645
             ||||| ||||||||| |||| || |||||||| ||||| || || |||||||||||
Sbjct: 36096 gtatcgtccaagtagtatttagccttgcttggcttttgcccaactgtgcatgcaaa 36041
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>ref|NM_117886.2| Arabidopsis thaliana ATTPS5; transferase, transferring glycosyl
            groups / trehalose-phosphatase AT4G17770 (ATTPS5) mRNA,
            complete cds
          Length = 3052

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                              
Query: 606  attttgctttgcttggtttttgtcccacagtgca 639
            |||||||||||||||| |||||||| || |||||
Sbjct: 2763 attttgctttgcttggcttttgtccaacggtgca 2730
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>ref|NM_105697.2| Arabidopsis thaliana ATTPS8; transferase, transferring glycosyl
            groups AT1G70290 (ATTPS8) mRNA, complete cds
          Length = 3017

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                              
Query: 596  tccaagtagaattttgctttgcttggtttttgtcccacagtgcatgcaaa 645
            |||||| || |||| |||||||||||||||  ||| || |||||||||||
Sbjct: 2705 tccaagaagtatttagctttgcttggttttcttccaaccgtgcatgcaaa 2656
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>gb|AC102595.9| Mus musculus chromosome 10, clone RP23-360M11, complete sequence
          Length = 223843

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 174   tactagagaaggaaaaggttta 195
             ||||||||||||||||||||||
Sbjct: 52432 tactagagaaggaaaaggttta 52411
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>gb|AC124704.4| Mus musculus BAC clone RP23-480H24 from chromosome 6, complete
            sequence
          Length = 185099

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 617  cttggtttttgtcccacagtgc 638
            ||||||||||||||||||||||
Sbjct: 7105 cttggtttttgtcccacagtgc 7084
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>emb|Z97344.2|ATFCA9 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 9
          Length = 81835

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                               
Query: 606   attttgctttgcttggtttttgtcccacagtgca 639
             |||||||||||||||| |||||||| || |||||
Sbjct: 45302 attttgctttgcttggcttttgtccaacggtgca 45269
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>gb|AC163031.5| Mus musculus BAC clone RP24-146A18 from chromosome 6, complete
            sequence
          Length = 149473

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 617  cttggtttttgtcccacagtgc 638
            ||||||||||||||||||||||
Sbjct: 6162 cttggtttttgtcccacagtgc 6183
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>emb|AL161547.2|ATCHRIV47 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 47
          Length = 198067

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                               
Query: 606   attttgctttgcttggtttttgtcccacagtgca 639
             |||||||||||||||| |||||||| || |||||
Sbjct: 40314 attttgctttgcttggcttttgtccaacggtgca 40281
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>dbj|AK221368.1| Arabidopsis thaliana mRNA for trehalose-6-phosphate synthase like
           protein, complete cds, clone: RAFL25-34-L01
          Length = 633

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 606 attttgctttgcttggtttttgtcccacagtgca 639
           |||||||||||||||| |||||||| || |||||
Sbjct: 429 attttgctttgcttggcttttgtccaacggtgca 396
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>gb|AC158599.7| Mus musculus 10 BAC RP23-122O12 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 191825

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 174    tactagagaaggaaaaggttta 195
              ||||||||||||||||||||||
Sbjct: 163916 tactagagaaggaaaaggttta 163895
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>emb|BX827855.1|CNS0A49N Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH27ZF11 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 2749

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                              
Query: 606  attttgctttgcttggtttttgtcccacagtgca 639
            |||||||||||||||| |||||||| || |||||
Sbjct: 2574 attttgctttgcttggcttttgtccaacggtgca 2541
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>gb|BT005967.1| Arabidopsis thaliana At4g17770 gene, complete cds
          Length = 2589

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                              
Query: 606  attttgctttgcttggtttttgtcccacagtgca 639
            |||||||||||||||| |||||||| || |||||
Sbjct: 2470 attttgctttgcttggcttttgtccaacggtgca 2437
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>gb|AY089209.1| Arabidopsis thaliana clone 95947 mRNA, complete sequence
          Length = 2957

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                              
Query: 606  attttgctttgcttggtttttgtcccacagtgca 639
            |||||||||||||||| |||||||| || |||||
Sbjct: 2762 attttgctttgcttggcttttgtccaacggtgca 2729
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>gb|AF155150.1| Arabidopsis thaliana trehalose-6-phosphate synthase 2 (TPS2) mRNA,
            complete cds
          Length = 2481

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                              
Query: 596  tccaagtagaattttgctttgcttggtttttgtcccacagtgcatgcaaa 645
            |||||| || |||| |||||||||||||||  ||| || |||||||||||
Sbjct: 2375 tccaagaagtatttagctttgcttggttttcttccaaccgtgcatgcaaa 2326
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>dbj|AK118703.1| Arabidopsis thaliana At4g17770 mRNA for putative
            trehalose-6-phosphate synthase, complete cds, clone:
            RAFL19-96-N16
          Length = 2774

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                              
Query: 606  attttgctttgcttggtttttgtcccacagtgca 639
            |||||||||||||||| |||||||| || |||||
Sbjct: 2571 attttgctttgcttggcttttgtccaacggtgca 2538
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>gb|AC003671.1|F17O7 Arabidopsis thaliana chromosome 1 BAC F17O7 complete sequence
          Length = 92128

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                               
Query: 596   tccaagtagaattttgctttgcttggtttttgtcccacagtgcatgcaaa 645
             |||||| || |||| |||||||||||||||  ||| || |||||||||||
Sbjct: 83224 tccaagaagtatttagctttgcttggttttcttccaaccgtgcatgcaaa 83175
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>gb|AC130677.12| Mus musculus chromosome 7, clone RP24-529F12, complete sequence
          Length = 166181

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 174   tactagagaaggaaaaggttt 194
             |||||||||||||||||||||
Sbjct: 17320 tactagagaaggaaaaggttt 17300
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>gb|AC123066.4| Mus musculus BAC clone RP23-262I13 from chromosome 19, complete
             sequence
          Length = 206333

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 608   tttgctttgcttggtttttgt 628
             |||||||||||||||||||||
Sbjct: 10447 tttgctttgcttggtttttgt 10427
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>gb|AC122242.2| Mus musculus BAC clone RP23-147P2 from chromosome 13, complete sequence
          Length = 208096

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 606    attttgctttgcttggttttt 626
              |||||||||||||||||||||
Sbjct: 164530 attttgctttgcttggttttt 164510
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>gb|AC132389.3| Mus musculus BAC clone RP23-448A4 from chromosome 19, complete sequence
          Length = 165998

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 608   tttgctttgcttggtttttgt 628
             |||||||||||||||||||||
Sbjct: 33451 tttgctttgcttggtttttgt 33471
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>emb|AL358949.16| Human DNA sequence from clone RP11-302K6 on chromosome 10 Contains
            part of the gene for VPS10 domain receptor protein SORCS
            3 (SORCS3), complete sequence
          Length = 166563

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 607  ttttgctttgcttggtttttg 627
            |||||||||||||||||||||
Sbjct: 6409 ttttgctttgcttggtttttg 6389
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>gb|AC102383.7| Mus musculus chromosome 1, clone RP24-312K8, complete sequence
          Length = 142805

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 608   tttgctttgcttggtttttgt 628
             |||||||||||||||||||||
Sbjct: 91807 tttgctttgcttggtttttgt 91827
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>gb|AC151574.2| Mus musculus BAC clone RP23-430A4 from 7, complete sequence
          Length = 219246

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 174    tactagagaaggaaaaggttt 194
              |||||||||||||||||||||
Sbjct: 175379 tactagagaaggaaaaggttt 175359
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>ref|NM_102235.2| Arabidopsis thaliana ATTPS9; transferase, transferring glycosyl
            groups / trehalose-phosphatase AT1G23870 (ATTPS9) mRNA,
            complete cds
          Length = 2973

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                    
Query: 606  attttgctttgcttggtttttgtcccacagtgcatgcaaa 645
            |||| |||||||||||||||  |||||| ||||| |||||
Sbjct: 2689 atttggctttgcttggttttcttcccaccgtgcaggcaaa 2650
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>gb|AF412833.1| Danio rerio mismatch repair protein Msh2 (msh2) mRNA, complete cds
          Length = 3012

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 258 aaaagattgcaatgtcttgc 277
           ||||||||||||||||||||
Sbjct: 802 aaaagattgcaatgtcttgc 821
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>gb|AE017263.1| Mesoplasma florum L1 complete genome
          Length = 793224

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 186    aaaaggtttaagagaaagtt 205
              ||||||||||||||||||||
Sbjct: 536876 aaaaggtttaagagaaagtt 536857
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>gb|AC161490.7| Mus musculus chromosome 7, clone RP23-307M23, complete sequence
          Length = 169596

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 186    aaaaggtttaagagaaagttccaa 209
              ||||| ||||||||||||||||||
Sbjct: 110303 aaaagttttaagagaaagttccaa 110280
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>gb|AC139240.4| Mus musculus BAC clone RP24-128J14 from chromosome 18, complete sequence
          Length = 173054

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 82     ttgaatttccatgtgcagtg 101
              ||||||||||||||||||||
Sbjct: 105498 ttgaatttccatgtgcagtg 105517
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>gb|AC132351.3| Mus musculus BAC clone RP24-95F24 from chromosome 18, complete sequence
          Length = 186726

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 82     ttgaatttccatgtgcagtg 101
              ||||||||||||||||||||
Sbjct: 175106 ttgaatttccatgtgcagtg 175087
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>gb|AC103810.5| Homo sapiens chromosome 17, clone RP11-927P21, complete sequence
          Length = 203192

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 613    tttgcttggtttttgtccca 632
              ||||||||||||||||||||
Sbjct: 131917 tttgcttggtttttgtccca 131936
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>emb|AL359438.19| Human DNA sequence from clone RP11-261A1 on chromosome 13 Contains a
             legumain (LGMN) (PRSC1) pseudogene, complete sequence
          Length = 166490

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 485   atatcaaatgaggacataga 504
             ||||||||||||||||||||
Sbjct: 16579 atatcaaatgaggacataga 16598
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>emb|Z97211.2|SPBC2F12 S.pombe chromosome II cosmid c2F12
          Length = 38012

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 245   tgcgttttgcagcaaaagat 264
             ||||||||||||||||||||
Sbjct: 21299 tgcgttttgcagcaaaagat 21318
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>gb|AY096366.1| Arabidopsis thaliana putative trehalose 6-phosphate synthase
            (At1g23870) mRNA, complete cds
          Length = 2635

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                    
Query: 606  attttgctttgcttggtttttgtcccacagtgcatgcaaa 645
            |||| |||||||||||||||  |||||| ||||| |||||
Sbjct: 2470 atttggctttgcttggttttcttcccaccgtgcaggcaaa 2431
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>gb|AY072210.1| Arabidopsis thaliana putative trehalose 6-phosphate synthase
            (At1g23870) mRNA, complete cds
          Length = 2987

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                    
Query: 606  attttgctttgcttggtttttgtcccacagtgcatgcaaa 645
            |||| |||||||||||||||  |||||| ||||| |||||
Sbjct: 2690 atttggctttgcttggttttcttcccaccgtgcaggcaaa 2651
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>gb|AC159305.3| Mus musculus BAC clone RP23-205D10 from chromosome 6, complete
            sequence
          Length = 209064

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 108  ctagaatcccaagtgcccat 127
            ||||||||||||||||||||
Sbjct: 1836 ctagaatcccaagtgcccat 1855
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>emb|AL808125.11| Mouse DNA sequence from clone RP23-193L22 on chromosome 2, complete
              sequence
          Length = 236619

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 146    cacttgccttccaggaagct 165
              ||||||||||||||||||||
Sbjct: 162910 cacttgccttccaggaagct 162891
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>gb|DP000059.1| Carollia perspicillata target 117 genomic scaffold
          Length = 359132

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 170    gttttactagagaaggaaaaggtt 193
              ||||||||||| ||||||||||||
Sbjct: 275799 gttttactagaaaaggaaaaggtt 275776
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>dbj|AK134020.1| Mus musculus adult male thymus cDNA, RIKEN full-length enriched
            library, clone:5830408J16 product:unclassifiable, full
            insert sequence
          Length = 2208

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 108  ctagaatcccaagtgcccat 127
            ||||||||||||||||||||
Sbjct: 1228 ctagaatcccaagtgcccat 1209
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>gb|AY075650.1| Arabidopsis thaliana At1g23880/T23E23_8 mRNA, complete cds
          Length = 2780

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 606 attttgctttgcttggtttttgtcccacagtgcatgcaaa 645
           |||| |||||||||||||||  |||||| ||||| |||||
Sbjct: 281 atttggctttgcttggttttcttcccaccgtgcaggcaaa 242
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>gb|AC023136.6| Homo sapiens BAC clone RP11-497K21 from 4, complete sequence
          Length = 185593

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 484    aatatcaaatgaggacatag 503
              ||||||||||||||||||||
Sbjct: 110853 aatatcaaatgaggacatag 110872
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>ref|XM_697605.1| PREDICTED: Danio rerio hypothetical protein LOC555149 (LOC555149),
           mRNA
          Length = 3052

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 258 aaaagattgcaatgtcttgc 277
           ||||||||||||||||||||
Sbjct: 828 aaaagattgcaatgtcttgc 847
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>dbj|AK048469.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched
            library, clone:C130063H01 product:unclassifiable, full
            insert sequence
          Length = 4683

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 146  cacttgccttccaggaagct 165
            ||||||||||||||||||||
Sbjct: 3943 cacttgccttccaggaagct 3962
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>gb|AC091132.16| Homo sapiens chromosome 17, clone RP11-798G7, complete sequence
          Length = 207611

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 613    tttgcttggtttttgtccca 632
              ||||||||||||||||||||
Sbjct: 107343 tttgcttggtttttgtccca 107362
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>gb|AC002423.3|AC002423 Genomic sequence for Arabidopsis thaliana BAC T23E23, complete
            sequence
          Length = 99254

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                    
Query: 606  attttgctttgcttggtttttgtcccacagtgcatgcaaa 645
            |||| |||||||||||||||  |||||| ||||| |||||
Sbjct: 9851 atttggctttgcttggttttcttcccaccgtgcaggcaaa 9812
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>gb|AC092855.39| Mus musculus strain C57BL/6J chromosome 3 clone rp23-49o17, complete
              sequence
          Length = 249205

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 608    tttgctttgcttggtttttg 627
              ||||||||||||||||||||
Sbjct: 148382 tttgctttgcttggtttttg 148401
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>gb|AE014299.1| Shewanella oneidensis MR-1, complete genome
          Length = 4969803

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 252    tgcagcaaaagattgcaatg 271
              ||||||||||||||||||||
Sbjct: 224238 tgcagcaaaagattgcaatg 224219
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>gb|AC174446.2| Mus musculus BAC clone RP23-356N23 from chromosome 6, complete sequence
          Length = 193034

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 108   ctagaatcccaagtgcccat 127
             ||||||||||||||||||||
Sbjct: 86289 ctagaatcccaagtgcccat 86270
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>gb|AC003663.1|AC003663 Homo sapiens chromosome 17, clone HCIT87G17, complete sequence
          Length = 132070

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 613   tttgcttggtttttgtccca 632
             ||||||||||||||||||||
Sbjct: 11424 tttgcttggtttttgtccca 11443


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,376,064
Number of Sequences: 3902068
Number of extensions: 5376064
Number of successful extensions: 123138
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 122930
Number of HSP's gapped (non-prelim): 208
length of query: 681
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 658
effective length of database: 17,143,297,704
effective search space: 11280289889232
effective search space used: 11280289889232
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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