ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd21o02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1BIRC6_HUMAN (Q9NR09) Baculoviral IAP repeat-containing protein 6... 61 2e-09

>BIRC6_HUMAN (Q9NR09) Baculoviral IAP repeat-containing protein 6|
            (Ubiquitin-conjugating BIR-domain enzyme apollon)
          Length = 4829

 Score = 61.2 bits (147), Expect = 2e-09
 Identities = 34/105 (32%), Positives = 50/105 (47%), Gaps = 1/105 (0%)
 Frame = -1

Query: 553  LNTWTGRGNEVWDPXXXXXXXXXXXXXXXXLNEKPYFNEAGYEXQVGTVEGEKNALPYNE 374
            LNTW GR  E W+P                L  +PYFNE GYE   GT  G +++  Y+ 
Sbjct: 4642 LNTWHGRPEEKWNPQTSSFLQVLVSVQSLILVAEPYFNEPGYERSRGTPSGTQSSREYDG 4701

Query: 373  XTYXXSVK-SMLYILRRPPMNFEDFVKSHFCKRGHXILKACEAYL 242
                 +VK +ML  +R P   F++ +  HF  +   I+  CE ++
Sbjct: 4702 NIRQATVKWAMLEQIRNPSPCFKEVIHKHFYLKRVEIMAQCEEWI 4746


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,657,860
Number of Sequences: 219361
Number of extensions: 1272336
Number of successful extensions: 2526
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2468
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2524
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4488201198
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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