ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd22c22
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BC029142.1| Homo sapiens, clone IMAGE:5196881, mRNA 878 0.0
2gb|AF498268.1| Haynaldia villosa clone kong28 mRNA 858 0.0
3ref|XM_507550.1| PREDICTED Oryza sativa (japonica cultivar-group... 210 4e-51
4ref|XM_507549.1| PREDICTED Oryza sativa (japonica cultivar-group... 210 4e-51
5ref|XM_507051.2| PREDICTED Oryza sativa (japonica cultivar-group... 210 4e-51
6ref|XM_468415.1| Oryza sativa (japonica cultivar-group), mRNA 210 4e-51
7gb|AY346465.1| Oryza sativa (indica cultivar-group) putative bro... 210 4e-51
8dbj|AK104947.1| Oryza sativa (japonica cultivar-group) cDNA clon... 210 4e-51
9dbj|AK104525.1| Oryza sativa (japonica cultivar-group) cDNA clon... 210 4e-51
10dbj|AK104684.1| Oryza sativa (japonica cultivar-group) cDNA clon... 210 4e-51
11dbj|AK104103.1| Oryza sativa (japonica cultivar-group) cDNA clon... 210 4e-51
12dbj|AK071580.1| Oryza sativa (japonica cultivar-group) cDNA clon... 210 4e-51
13dbj|AK065134.1| Oryza sativa (japonica cultivar-group) cDNA clon... 210 4e-51
14gb|AY346466.1| Oryza sativa (indica cultivar-group) brown planth... 196 6e-47
15gb|AY112171.1| Zea mays CL11049_1 mRNA sequence 196 6e-47
16dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 86 2e-13
17dbj|AP004048.3| Oryza sativa (japonica cultivar-group) genomic D... 86 2e-13
18dbj|AP004028.3| Oryza sativa (japonica cultivar-group) genomic D... 86 2e-13
19dbj|AK068163.1| Oryza sativa (japonica cultivar-group) cDNA clon... 86 2e-13
20gb|AC130222.4| Mus musculus BAC clone RP23-18K19 from chromosome... 46 0.13
21gb|AC122227.4| Mus musculus BAC clone RP23-131H10 from chromosom... 46 0.13
22gb|AC037492.5|AC037492 Homo sapiens chromosome 8, clone RP11-38H... 44 0.53
23gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence 40 8.3
24gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 40 8.3
25gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, comp... 40 8.3
26ref|XM_841417.1| Trypanosoma brucei TREU927 hypothetical protein... 40 8.3
27emb|AL591793.1|SME591793 Sinorhizobium meliloti 1021 complete ch... 40 8.3
28gb|AC018738.4| Homo sapiens BAC clone RP11-419H23 from 2, comple... 40 8.3
29ref|XM_815829.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 8.3
30gb|CP000316.1| Polaromonas sp. JS666, complete genome 40 8.3
31emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 40 8.3
32gb|AC073576.23| Homo sapiens 12 BAC RP11-363M20 (Roswell Park Ca... 40 8.3
33gb|CP000249.1| Frankia sp. CcI3, complete genome 40 8.3
34gb|AF131950.1| Human papillomavirus candHPV85, complete genome 40 8.3
35gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 8.3
36gb|AC008750.9| Homo sapiens chromosome 19 clone CTD-2616J11, com... 40 8.3
37gb|AE004451.1| Pseudomonas aeruginosa PAO1, section 12 of 529 of... 40 8.3
38emb|AL355916.2|CNS05TD1 Human chromosome 14 DNA sequence BAC R-4... 40 8.3
39dbj|AP002347.3| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 8.3
40dbj|AP000790.4| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 8.3 
>gb|BC029142.1| Homo sapiens, clone IMAGE:5196881, mRNA
          Length = 1061

 Score =  878 bits (443), Expect = 0.0
 Identities = 540/567 (95%), Gaps = 4/567 (0%)
 Strand = Plus / Minus

                                                                       
Query: 9   cctggcgtgcttctttacaaggnaaaagctctcctaaatgctcccaggcatattttt-gc 67
           |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||
Sbjct: 866 cctggcgtgcttctttacaagg-aaaagctctcctaaatgctcccaggcttattttttgc 808

                                                                       
Query: 68  gatacaggctacaaacacttttacat-ctataggatctgcctgctactcaaaagtaccgc 126
           ||||||| || ||||||||||||||  ||||||||||||||||||||||||| |||||||
Sbjct: 807 gatacagactgcaaacacttttacagactataggatctgcctgctactcaaa-gtaccgc 749

                                                                       
Query: 127 ggacacacatatttacagatccacaagtaccgggcatgggctcctgcgcctctaaaactt 186
           ||||||||||||||||||||||||||||||||||||||| |||||||  |||||||||||
Sbjct: 748 ggacacacatatttacagatccacaagtaccgggcatggactcctgcatctctaaaactt 689

                                                                       
Query: 187 cagcatggcctccaacgcgcgaagaacgtcatcgcgggtaactatacctattacttgatt 246
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 cagcatggcctccaacgcgcgaagaacgtcatcgcgggtaactatacctattacttgatt 629

                                                                       
Query: 247 gtcctggtttactatcggtaatctgtggatcttcttcttgagcatcagagctgcggcatc 306
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 628 gtcctggtttactatcggtaatctgtggatcttcttcctgagcatcagagctgcggcatc 569

                                                                       
Query: 307 ggtcactgttttatcgcatgatagcgtgattgctggagatgtcatcacatctgcaatctt 366
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 ggtcactgttttatcgcatgatagcgtgattgctggagatgtcatcacatctgcaatctt 509

                                                                       
Query: 367 cgtccttgacccatgtgaagccctcgcgcgatcgctcttgacgacgaccccgacacatcg 426
           |||| ||| |||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct: 508 cgtctttggcccatgtgaagccctcacgtgatcgctcttgacgacgaccccgacacatcg 449

                                                                       
Query: 427 gcgggcgctgtcgacaaccgggaggcctgacacgagctggaagtgtccttcaacctccac 486
           |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 448 gcgggcactgtcgacaaccgggaggcctgacacgagctggaagtggccttcaacctccac 389

                                                                       
Query: 487 cagtgcctggtccgctgtggccatcagcacgggcgtcgacatggcctcgcgcaggagcgc 546
           ||| ||||| ||||||||| |||||||||||||||||||||||||||| |||||||| | 
Sbjct: 388 cagcgcctgctccgctgtgaccatcagcacgggcgtcgacatggcctcacgcaggagagg 329

                                      
Query: 547 ccctcggtgctgatcgccggcgtggga 573
           ||| || |||||||||||||| |||||
Sbjct: 328 cccccgctgctgatcgccggcatggga 302
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>gb|AF498268.1| Haynaldia villosa clone kong28 mRNA
          Length = 1474

 Score =  858 bits (433), Expect = 0.0
 Identities = 539/569 (94%), Gaps = 4/569 (0%)
 Strand = Plus / Plus

                                                                       
Query: 12  ggcgtgcttctttacaaggnaaaagctctcctaaatgctcccaggcatatttttgcgata 71
           ||||||||||||||||||| ||||||||||||||| | |||||||| |||||||||||||
Sbjct: 47  ggcgtgcttctttacaagg-aaaagctctcctaaaagttcccaggcttatttttgcgata 105

                                                                       
Query: 72  caggctacaaacacttttacat-ctataggatctgcctgctactcaaaagtaccgcggac 130
           |||||||||| ||||||||||  |||||| |||||||||||||||||||| |||||||||
Sbjct: 106 caggctacaa-cacttttacagactatag-atctgcctgctactcaaaagcaccgcggac 163

                                                                       
Query: 131 acacatatttacagatccacaagtaccgggcatgggctcctgcgcctctaaaacttcagc 190
           ||||||||||||||||||||||||||||||||||| |||||||  |||||||||||||||
Sbjct: 164 acacatatttacagatccacaagtaccgggcatggactcctgcatctctaaaacttcagc 223

                                                                       
Query: 191 atggcctccaacgcgcgaagaacgtcatcgcgggtaactatacctattacttgattgtcc 250
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 224 atggcctccaacgcgcgaagaacgtcgtcgcgggtaactatacctattacttgattgtcc 283

                                                                       
Query: 251 tggtttactatcggtaatctgtggatcttcttcttgagcatcagagctgcggcatcggtc 310
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 tggtttactatcggtaatctgtggatcttcttcttgagcatcagagctgcggcatcggtc 343

                                                                       
Query: 311 actgttttatcgcatgatagcgtgattgctggagatgtcatcacatctgcaatcttcgtc 370
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 actgttttatcgcatgatagcgtgattgctggagatgtcatcacatctgcaatcttcgtc 403

                                                                       
Query: 371 cttgacccatgtgaagccctcgcgcgatcgctcttgacgacgaccccgacacatcggcgg 430
            ||| |||||||||||||||||||| ||||||||| |||||||||||||| |||| ||| 
Sbjct: 404 tttggcccatgtgaagccctcgcgcaatcgctcttcacgacgaccccgacgcatctgcga 463

                                                                       
Query: 431 gcgctgtcgacaaccgggaggcctgacacgagctggaagtgtccttcaacctccaccagt 490
           ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| 
Sbjct: 464 gcgctgtcgacaaccgggaggcctgacacgagctgaaagtggccttcaacctccaccagc 523

                                                                       
Query: 491 gcctggtccgctgtggccatcagcacgggcgtcgacatggcctcgcgcaggagcgcccct 550
           ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| ||| 
Sbjct: 524 gcctgctccgctgtgaccatcagcacgggcgtcgacatggcctcgcgcaggagcggcccc 583

                                        
Query: 551 cggtgctgatcgccggcgtgggaaggtgg 579
           || ||||||||| | ||||||||||||||
Sbjct: 584 cgctgctgatcggcagcgtgggaaggtgg 612
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>ref|XM_507550.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1136_C12.20-2
           mRNA
          Length = 916

 Score =  210 bits (106), Expect = 4e-51
 Identities = 202/234 (86%)
 Strand = Plus / Minus

                                                                       
Query: 177 tctaaaacttcagcatggcctccaacgcgcgaagaacgtcatcgcgggtaactataccta 236
           |||||| || ||||| ||| |||||| |||||||||||||| | ||||||||||||||||
Sbjct: 690 tctaaacctccagcagggcttccaactcgcgaagaacgtcagcacgggtaactataccta 631

                                                                       
Query: 237 ttacttgattgtcctggtttactatcggtaatctgtggatcttcttcttgagcatcagag 296
           | |||||  ||||||| ||||| || ||||||||||||||||||||||| ||||||||||
Sbjct: 630 tcacttgtctgtcctgatttacaattggtaatctgtggatcttcttctttagcatcagag 571

                                                                       
Query: 297 ctgcggcatcggtcactgttttatcgcatgatagcgtgattgctggagatgtcatcacat 356
           |||| |||||  | |||||||| ||  ||| ||| ||||| |||||||| |||||||| |
Sbjct: 570 ctgccgcatccattactgttttgtcagatggtagagtgatggctggagaggtcatcactt 511

                                                                 
Query: 357 ctgcaatcttcgtccttgacccatgtgaagccctcgcgcgatcgctcttgacga 410
           |||||||||||||| |||||||||| |||||||| || || || ||||||||||
Sbjct: 510 ctgcaatcttcgtctttgacccatgagaagccctggcccggtcactcttgacga 457
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>ref|XM_507549.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1136_C12.20-2
           mRNA
          Length = 1002

 Score =  210 bits (106), Expect = 4e-51
 Identities = 202/234 (86%)
 Strand = Plus / Minus

                                                                       
Query: 177 tctaaaacttcagcatggcctccaacgcgcgaagaacgtcatcgcgggtaactataccta 236
           |||||| || ||||| ||| |||||| |||||||||||||| | ||||||||||||||||
Sbjct: 690 tctaaacctccagcagggcttccaactcgcgaagaacgtcagcacgggtaactataccta 631

                                                                       
Query: 237 ttacttgattgtcctggtttactatcggtaatctgtggatcttcttcttgagcatcagag 296
           | |||||  ||||||| ||||| || ||||||||||||||||||||||| ||||||||||
Sbjct: 630 tcacttgtctgtcctgatttacaattggtaatctgtggatcttcttctttagcatcagag 571

                                                                       
Query: 297 ctgcggcatcggtcactgttttatcgcatgatagcgtgattgctggagatgtcatcacat 356
           |||| |||||  | |||||||| ||  ||| ||| ||||| |||||||| |||||||| |
Sbjct: 570 ctgccgcatccattactgttttgtcagatggtagagtgatggctggagaggtcatcactt 511

                                                                 
Query: 357 ctgcaatcttcgtccttgacccatgtgaagccctcgcgcgatcgctcttgacga 410
           |||||||||||||| |||||||||| |||||||| || || || ||||||||||
Sbjct: 510 ctgcaatcttcgtctttgacccatgagaagccctggcccggtcactcttgacga 457
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>ref|XM_507051.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1136_C12.20-2
           mRNA
          Length = 956

 Score =  210 bits (106), Expect = 4e-51
 Identities = 202/234 (86%)
 Strand = Plus / Minus

                                                                       
Query: 177 tctaaaacttcagcatggcctccaacgcgcgaagaacgtcatcgcgggtaactataccta 236
           |||||| || ||||| ||| |||||| |||||||||||||| | ||||||||||||||||
Sbjct: 696 tctaaacctccagcagggcttccaactcgcgaagaacgtcagcacgggtaactataccta 637

                                                                       
Query: 237 ttacttgattgtcctggtttactatcggtaatctgtggatcttcttcttgagcatcagag 296
           | |||||  ||||||| ||||| || ||||||||||||||||||||||| ||||||||||
Sbjct: 636 tcacttgtctgtcctgatttacaattggtaatctgtggatcttcttctttagcatcagag 577

                                                                       
Query: 297 ctgcggcatcggtcactgttttatcgcatgatagcgtgattgctggagatgtcatcacat 356
           |||| |||||  | |||||||| ||  ||| ||| ||||| |||||||| |||||||| |
Sbjct: 576 ctgccgcatccattactgttttgtcagatggtagagtgatggctggagaggtcatcactt 517

                                                                 
Query: 357 ctgcaatcttcgtccttgacccatgtgaagccctcgcgcgatcgctcttgacga 410
           |||||||||||||| |||||||||| |||||||| || || || ||||||||||
Sbjct: 516 ctgcaatcttcgtctttgacccatgagaagccctggcccggtcactcttgacga 463
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>ref|XM_468415.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 833

 Score =  210 bits (106), Expect = 4e-51
 Identities = 202/234 (86%)
 Strand = Plus / Minus

                                                                       
Query: 177 tctaaaacttcagcatggcctccaacgcgcgaagaacgtcatcgcgggtaactataccta 236
           |||||| || ||||| ||| |||||| |||||||||||||| | ||||||||||||||||
Sbjct: 682 tctaaacctccagcagggcttccaactcgcgaagaacgtcagcacgggtaactataccta 623

                                                                       
Query: 237 ttacttgattgtcctggtttactatcggtaatctgtggatcttcttcttgagcatcagag 296
           | |||||  ||||||| ||||| || ||||||||||||||||||||||| ||||||||||
Sbjct: 622 tcacttgtctgtcctgatttacaattggtaatctgtggatcttcttctttagcatcagag 563

                                                                       
Query: 297 ctgcggcatcggtcactgttttatcgcatgatagcgtgattgctggagatgtcatcacat 356
           |||| |||||  | |||||||| ||  ||| ||| ||||| |||||||| |||||||| |
Sbjct: 562 ctgccgcatccattactgttttgtcagatggtagagtgatggctggagaggtcatcactt 503

                                                                 
Query: 357 ctgcaatcttcgtccttgacccatgtgaagccctcgcgcgatcgctcttgacga 410
           |||||||||||||| |||||||||| |||||||| || || || ||||||||||
Sbjct: 502 ctgcaatcttcgtctttgacccatgagaagccctggcccggtcactcttgacga 449
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>gb|AY346465.1| Oryza sativa (indica cultivar-group) putative brown planthopper
            susceptibility protein Hd002A mRNA, complete cds
          Length = 1265

 Score =  210 bits (106), Expect = 4e-51
 Identities = 202/234 (86%)
 Strand = Plus / Minus

                                                                        
Query: 177  tctaaaacttcagcatggcctccaacgcgcgaagaacgtcatcgcgggtaactataccta 236
            |||||| || ||||| ||| |||||| |||||||||||||| | ||||||||||||||||
Sbjct: 1114 tctaaacctccagcagggcttccaactcgcgaagaacgtcagcacgggtaactataccta 1055

                                                                        
Query: 237  ttacttgattgtcctggtttactatcggtaatctgtggatcttcttcttgagcatcagag 296
            | |||||  ||||||| ||||| || ||||||||||||||||||||||| ||||||||||
Sbjct: 1054 tcacttgtctgtcctgatttacaattggtaatctgtggatcttcttctttagcatcagag 995

                                                                        
Query: 297  ctgcggcatcggtcactgttttatcgcatgatagcgtgattgctggagatgtcatcacat 356
            |||| |||||  | |||||||| ||  ||| ||| ||||| |||||||| |||||||| |
Sbjct: 994  ctgccgcatccattactgttttgtcagatggtagagtgatggctggagaggtcatcactt 935

                                                                  
Query: 357  ctgcaatcttcgtccttgacccatgtgaagccctcgcgcgatcgctcttgacga 410
            |||||||||||||| |||||||||| |||||||| || || || ||||||||||
Sbjct: 934  ctgcaatcttcgtctttgacccatgagaagccctggcccggtcactcttgacga 881
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>dbj|AK104947.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-108-G08, full
           insert sequence
          Length = 833

 Score =  210 bits (106), Expect = 4e-51
 Identities = 202/234 (86%)
 Strand = Plus / Minus

                                                                       
Query: 177 tctaaaacttcagcatggcctccaacgcgcgaagaacgtcatcgcgggtaactataccta 236
           |||||| || ||||| ||| |||||| |||||||||||||| | ||||||||||||||||
Sbjct: 682 tctaaacctccagcagggcttccaactcgcgaagaacgtcagcacgggtaactataccta 623

                                                                       
Query: 237 ttacttgattgtcctggtttactatcggtaatctgtggatcttcttcttgagcatcagag 296
           | |||||  ||||||| ||||| || ||||||||||||||||||||||| ||||||||||
Sbjct: 622 tcacttgtctgtcctgatttacaattggtaatctgtggatcttcttctttagcatcagag 563

                                                                       
Query: 297 ctgcggcatcggtcactgttttatcgcatgatagcgtgattgctggagatgtcatcacat 356
           |||| |||||  | |||||||| ||  ||| ||| ||||| |||||||| |||||||| |
Sbjct: 562 ctgccgcatccattactgttttgtcagatggtagagtgatggctggagaggtcatcactt 503

                                                                 
Query: 357 ctgcaatcttcgtccttgacccatgtgaagccctcgcgcgatcgctcttgacga 410
           |||||||||||||| |||||||||| |||||||| || || || ||||||||||
Sbjct: 502 ctgcaatcttcgtctttgacccatgagaagccctggcccggtcactcttgacga 449
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>dbj|AK104525.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-H03, full
           insert sequence
          Length = 994

 Score =  210 bits (106), Expect = 4e-51
 Identities = 202/234 (86%)
 Strand = Plus / Minus

                                                                       
Query: 177 tctaaaacttcagcatggcctccaacgcgcgaagaacgtcatcgcgggtaactataccta 236
           |||||| || ||||| ||| |||||| |||||||||||||| | ||||||||||||||||
Sbjct: 682 tctaaacctccagcagggcttccaactcgcgaagaacgtcagcacgggtaactataccta 623

                                                                       
Query: 237 ttacttgattgtcctggtttactatcggtaatctgtggatcttcttcttgagcatcagag 296
           | |||||  ||||||| ||||| || ||||||||||||||||||||||| ||||||||||
Sbjct: 622 tcacttgtctgtcctgatttacaattggtaatctgtggatcttcttctttagcatcagag 563

                                                                       
Query: 297 ctgcggcatcggtcactgttttatcgcatgatagcgtgattgctggagatgtcatcacat 356
           |||| |||||  | |||||||| ||  ||| ||| ||||| |||||||| |||||||| |
Sbjct: 562 ctgccgcatccattactgttttgtcagatggtagagtgatggctggagaggtcatcactt 503

                                                                 
Query: 357 ctgcaatcttcgtccttgacccatgtgaagccctcgcgcgatcgctcttgacga 410
           |||||||||||||| |||||||||| |||||||| || || || ||||||||||
Sbjct: 502 ctgcaatcttcgtctttgacccatgagaagccctggcccggtcactcttgacga 449
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>dbj|AK104684.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-B10, full
           insert sequence
          Length = 916

 Score =  210 bits (106), Expect = 4e-51
 Identities = 202/234 (86%)
 Strand = Plus / Minus

                                                                       
Query: 177 tctaaaacttcagcatggcctccaacgcgcgaagaacgtcatcgcgggtaactataccta 236
           |||||| || ||||| ||| |||||| |||||||||||||| | ||||||||||||||||
Sbjct: 690 tctaaacctccagcagggcttccaactcgcgaagaacgtcagcacgggtaactataccta 631

                                                                       
Query: 237 ttacttgattgtcctggtttactatcggtaatctgtggatcttcttcttgagcatcagag 296
           | |||||  ||||||| ||||| || ||||||||||||||||||||||| ||||||||||
Sbjct: 630 tcacttgtctgtcctgatttacaattggtaatctgtggatcttcttctttagcatcagag 571

                                                                       
Query: 297 ctgcggcatcggtcactgttttatcgcatgatagcgtgattgctggagatgtcatcacat 356
           |||| |||||  | |||||||| ||  ||| ||| ||||| |||||||| |||||||| |
Sbjct: 570 ctgccgcatccattactgttttgtcagatggtagagtgatggctggagaggtcatcactt 511

                                                                 
Query: 357 ctgcaatcttcgtccttgacccatgtgaagccctcgcgcgatcgctcttgacga 410
           |||||||||||||| |||||||||| |||||||| || || || ||||||||||
Sbjct: 510 ctgcaatcttcgtctttgacccatgagaagccctggcccggtcactcttgacga 457
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>dbj|AK104103.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-B08, full
           insert sequence
          Length = 1002

 Score =  210 bits (106), Expect = 4e-51
 Identities = 202/234 (86%)
 Strand = Plus / Minus

                                                                       
Query: 177 tctaaaacttcagcatggcctccaacgcgcgaagaacgtcatcgcgggtaactataccta 236
           |||||| || ||||| ||| |||||| |||||||||||||| | ||||||||||||||||
Sbjct: 690 tctaaacctccagcagggcttccaactcgcgaagaacgtcagcacgggtaactataccta 631

                                                                       
Query: 237 ttacttgattgtcctggtttactatcggtaatctgtggatcttcttcttgagcatcagag 296
           | |||||  ||||||| ||||| || ||||||||||||||||||||||| ||||||||||
Sbjct: 630 tcacttgtctgtcctgatttacaattggtaatctgtggatcttcttctttagcatcagag 571

                                                                       
Query: 297 ctgcggcatcggtcactgttttatcgcatgatagcgtgattgctggagatgtcatcacat 356
           |||| |||||  | |||||||| ||  ||| ||| ||||| |||||||| |||||||| |
Sbjct: 570 ctgccgcatccattactgttttgtcagatggtagagtgatggctggagaggtcatcactt 511

                                                                 
Query: 357 ctgcaatcttcgtccttgacccatgtgaagccctcgcgcgatcgctcttgacga 410
           |||||||||||||| |||||||||| |||||||| || || || ||||||||||
Sbjct: 510 ctgcaatcttcgtctttgacccatgagaagccctggcccggtcactcttgacga 457
to top
>dbj|AK071580.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023106O04, full
           insert sequence
          Length = 1514

 Score =  210 bits (106), Expect = 4e-51
 Identities = 202/234 (86%)
 Strand = Plus / Minus

                                                                       
Query: 177 tctaaaacttcagcatggcctccaacgcgcgaagaacgtcatcgcgggtaactataccta 236
           |||||| || ||||| ||| |||||| |||||||||||||| | ||||||||||||||||
Sbjct: 683 tctaaacctccagcagggcttccaactcgcgaagaacgtcagcacgggtaactataccta 624

                                                                       
Query: 237 ttacttgattgtcctggtttactatcggtaatctgtggatcttcttcttgagcatcagag 296
           | |||||  ||||||| ||||| || ||||||||||||||||||||||| ||||||||||
Sbjct: 623 tcacttgtctgtcctgatttacaattggtaatctgtggatcttcttctttagcatcagag 564

                                                                       
Query: 297 ctgcggcatcggtcactgttttatcgcatgatagcgtgattgctggagatgtcatcacat 356
           |||| |||||  | |||||||| ||  ||| ||| ||||| |||||||| |||||||| |
Sbjct: 563 ctgccgcatccattactgttttgtcagatggtagagtgatggctggagaggtcatcactt 504

                                                                 
Query: 357 ctgcaatcttcgtccttgacccatgtgaagccctcgcgcgatcgctcttgacga 410
           |||||||||||||| |||||||||| |||||||| || || || ||||||||||
Sbjct: 503 ctgcaatcttcgtctttgacccatgagaagccctggcccggtcactcttgacga 450
to top
>dbj|AK065134.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001P24, full
           insert sequence
          Length = 955

 Score =  210 bits (106), Expect = 4e-51
 Identities = 202/234 (86%)
 Strand = Plus / Minus

                                                                       
Query: 177 tctaaaacttcagcatggcctccaacgcgcgaagaacgtcatcgcgggtaactataccta 236
           |||||| || ||||| ||| |||||| |||||||||||||| | ||||||||||||||||
Sbjct: 695 tctaaacctccagcagggcttccaactcgcgaagaacgtcagcacgggtaactataccta 636

                                                                       
Query: 237 ttacttgattgtcctggtttactatcggtaatctgtggatcttcttcttgagcatcagag 296
           | |||||  ||||||| ||||| || ||||||||||||||||||||||| ||||||||||
Sbjct: 635 tcacttgtctgtcctgatttacaattggtaatctgtggatcttcttctttagcatcagag 576

                                                                       
Query: 297 ctgcggcatcggtcactgttttatcgcatgatagcgtgattgctggagatgtcatcacat 356
           |||| |||||  | |||||||| ||  ||| ||| ||||| |||||||| |||||||| |
Sbjct: 575 ctgccgcatccattactgttttgtcagatggtagagtgatggctggagaggtcatcactt 516

                                                                 
Query: 357 ctgcaatcttcgtccttgacccatgtgaagccctcgcgcgatcgctcttgacga 410
           |||||||||||||| |||||||||| |||||||| || || || ||||||||||
Sbjct: 515 ctgcaatcttcgtctttgacccatgagaagccctggcccggtcactcttgacga 462
to top
>gb|AY346466.1| Oryza sativa (indica cultivar-group) brown planthopper-induced
           resistance protein 1 (Bi1) mRNA, complete cds
          Length = 1098

 Score =  196 bits (99), Expect = 6e-47
 Identities = 202/235 (85%), Gaps = 1/235 (0%)
 Strand = Plus / Minus

                                                                       
Query: 177 tctaaaacttcagcatggcctccaacgcgcgaagaacgtcatcgcgggtaactataccta 236
           |||||| || ||||| ||| |||||| |||||||||||||| | ||||||||||||||||
Sbjct: 949 tctaaacctccagcagggcttccaactcgcgaagaacgtcagcacgggtaactataccta 890

                                                                       
Query: 237 ttacttgattgtcctggtttactatcggtaatctgtggatc-ttcttcttgagcatcaga 295
           | |||||  ||||||| ||||| || ||||||||||||||| |||||||| |||||||||
Sbjct: 889 tcacttgtctgtcctgatttacaattggtaatctgtggatccttcttctttagcatcaga 830

                                                                       
Query: 296 gctgcggcatcggtcactgttttatcgcatgatagcgtgattgctggagatgtcatcaca 355
           ||||| |||||  | |||||||| ||  ||| ||| ||||| |||||||| |||||||| 
Sbjct: 829 gctgccgcatccattactgttttgtcagatggtagagtgatggctggagaggtcatcact 770

                                                                  
Query: 356 tctgcaatcttcgtccttgacccatgtgaagccctcgcgcgatcgctcttgacga 410
           ||||||||||||||| |||||||||| |||||||| || || || ||||||||||
Sbjct: 769 tctgcaatcttcgtctttgacccatgagaagccctggcccggtcactcttgacga 715
to top
>gb|AY112171.1| Zea mays CL11049_1 mRNA sequence
          Length = 803

 Score =  196 bits (99), Expect = 6e-47
 Identities = 301/370 (81%)
 Strand = Plus / Minus

                                                                       
Query: 178 ctaaaacttcagcatggcctccaacgcgcgaagaacgtcatcgcgggtaactatacctat 237
           ||||| ||||| |||| | |||||| |||||||||| ||| |||||||||||||||||||
Sbjct: 594 ctaaatcttcaacatgccttccaacacgcgaagaacatcagcgcgggtaactatacctat 535

                                                                       
Query: 238 tacttgattgtcctggtttactatcggtaatctgtggatcttcttcttgagcatcagagc 297
           |||      |||||||||||| |  ||||||||||||||||||||||||||||| ||| |
Sbjct: 534 tacnnnnncgtcctggtttacaactggtaatctgtggatcttcttcttgagcatgagaac 475

                                                                       
Query: 298 tgcggcatcggtcactgttttatcgcatgatagcgtgattgctggagatgtcatcacatc 357
            || |||||  |||| ||||| ||  | ||||| ||||| ||||||||||||||||| ||
Sbjct: 474 agcagcatccatcacggttttgtcagacgatagtgtgatagctggagatgtcatcacttc 415

                                                                       
Query: 358 tgcaatcttcgtccttgacccatgtgaagccctcgcgcgatcgctcttgacgacgacccc 417
            |  ||||||||| | |||||||| || || || || || ||| |||||||||  |||||
Sbjct: 414 cgatatcttcgtcttggacccatgagaggctcttgcccggtcgttcttgacgatcacccc 355

                                                                       
Query: 418 gacacatcggcgggcgctgtcgacaaccgggaggcctgacacgagctggaagtgtccttc 477
           ||| |||| | || |||||||||| ||||| || || ||||||  || |||||| |  ||
Sbjct: 354 gacgcatctgaggccgctgtcgacgaccggaagccccgacacggcctcgaagtggcactc 295

                                                                       
Query: 478 aacctccaccagtgcctggtccgctgtggccatcagcacgggcgtcgacatggcctcgcg 537
            || ||| |||| | |||||| |||||||||| ||||||||| || ||||||| ||||| 
Sbjct: 294 gacgtcctccagggtctggtctgctgtggccaccagcacgggtgtggacatggtctcgct 235

                     
Query: 538 caggagcgcc 547
           ||||||||||
Sbjct: 234 caggagcgcc 225
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 67/75 (89%)
 Strand = Plus / Minus

                                                                            
Query: 232      acctattacttgattgtcctggtttactatcggtaatctgtggatcttcttcttgagcat 291
                |||||| |||||  ||||||| ||||| || ||||||||||||||||||||||| |||||
Sbjct: 35111790 acctatcacttgtctgtcctgatttacaattggtaatctgtggatcttcttctttagcat 35111731

                               
Query: 292      cagagctgcggcatc 306
                ||||||||| |||||
Sbjct: 35111730 cagagctgccgcatc 35111716



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Minus

                                                                           
Query: 177      tctaaaacttcagcatggcctccaacgcgcgaagaacgtcatcgcgggtaactatacct 235
                |||||| || ||||| ||| |||||| |||||||||||||| | |||||||||||||||
Sbjct: 35111977 tctaaacctccagcagggcttccaactcgcgaagaacgtcagcacgggtaactatacct 35111919



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 57/66 (86%)
 Strand = Plus / Minus

                                                                            
Query: 311      actgttttatcgcatgatagcgtgattgctggagatgtcatcacatctgcaatcttcgtc 370
                |||||||| ||  ||| ||| ||||| |||||||| |||||||| |||||||||||||||
Sbjct: 35111621 actgttttgtcagatggtagagtgatggctggagaggtcatcacttctgcaatcttcgtc 35111562

                      
Query: 371      cttgac 376
                 |||||
Sbjct: 35111561 tttgac 35111556
to top
>dbj|AP004048.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OJ1202_E07
          Length = 145014

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 67/75 (89%)
 Strand = Plus / Minus

                                                                        
Query: 232  acctattacttgattgtcctggtttactatcggtaatctgtggatcttcttcttgagcat 291
            |||||| |||||  ||||||| ||||| || ||||||||||||||||||||||| |||||
Sbjct: 7146 acctatcacttgtctgtcctgatttacaattggtaatctgtggatcttcttctttagcat 7087

                           
Query: 292  cagagctgcggcatc 306
            ||||||||| |||||
Sbjct: 7086 cagagctgccgcatc 7072



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Minus

                                                                       
Query: 177  tctaaaacttcagcatggcctccaacgcgcgaagaacgtcatcgcgggtaactatacct 235
            |||||| || ||||| ||| |||||| |||||||||||||| | |||||||||||||||
Sbjct: 7333 tctaaacctccagcagggcttccaactcgcgaagaacgtcagcacgggtaactatacct 7275



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 57/66 (86%)
 Strand = Plus / Minus

                                                                        
Query: 311  actgttttatcgcatgatagcgtgattgctggagatgtcatcacatctgcaatcttcgtc 370
            |||||||| ||  ||| ||| ||||| |||||||| |||||||| |||||||||||||||
Sbjct: 6977 actgttttgtcagatggtagagtgatggctggagaggtcatcacttctgcaatcttcgtc 6918

                  
Query: 371  cttgac 376
             |||||
Sbjct: 6917 tttgac 6912
to top
>dbj|AP004028.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1136_C12
          Length = 103973

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 67/75 (89%)
 Strand = Plus / Minus

                                                                         
Query: 232   acctattacttgattgtcctggtttactatcggtaatctgtggatcttcttcttgagcat 291
             |||||| |||||  ||||||| ||||| || ||||||||||||||||||||||| |||||
Sbjct: 84953 acctatcacttgtctgtcctgatttacaattggtaatctgtggatcttcttctttagcat 84894

                            
Query: 292   cagagctgcggcatc 306
             ||||||||| |||||
Sbjct: 84893 cagagctgccgcatc 84879



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Minus

                                                                        
Query: 177   tctaaaacttcagcatggcctccaacgcgcgaagaacgtcatcgcgggtaactatacct 235
             |||||| || ||||| ||| |||||| |||||||||||||| | |||||||||||||||
Sbjct: 85140 tctaaacctccagcagggcttccaactcgcgaagaacgtcagcacgggtaactatacct 85082



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 57/66 (86%)
 Strand = Plus / Minus

                                                                         
Query: 311   actgttttatcgcatgatagcgtgattgctggagatgtcatcacatctgcaatcttcgtc 370
             |||||||| ||  ||| ||| ||||| |||||||| |||||||| |||||||||||||||
Sbjct: 84784 actgttttgtcagatggtagagtgatggctggagaggtcatcacttctgcaatcttcgtc 84725

                   
Query: 371   cttgac 376
              |||||
Sbjct: 84724 tttgac 84719
to top
>dbj|AK068163.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013135B04, full
            insert sequence
          Length = 4217

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 67/75 (89%)
 Strand = Plus / Plus

                                                                        
Query: 232  acctattacttgattgtcctggtttactatcggtaatctgtggatcttcttcttgagcat 291
            |||||| |||||  ||||||| ||||| || ||||||||||||||||||||||| |||||
Sbjct: 2400 acctatcacttgtctgtcctgatttacaattggtaatctgtggatcttcttctttagcat 2459

                           
Query: 292  cagagctgcggcatc 306
            ||||||||| |||||
Sbjct: 2460 cagagctgccgcatc 2474



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Plus

                                                                       
Query: 177  tctaaaacttcagcatggcctccaacgcgcgaagaacgtcatcgcgggtaactatacct 235
            |||||| || ||||| ||| |||||| |||||||||||||| | |||||||||||||||
Sbjct: 2213 tctaaacctccagcagggcttccaactcgcgaagaacgtcagcacgggtaactatacct 2271



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 57/66 (86%)
 Strand = Plus / Plus

                                                                        
Query: 311  actgttttatcgcatgatagcgtgattgctggagatgtcatcacatctgcaatcttcgtc 370
            |||||||| ||  ||| ||| ||||| |||||||| |||||||| |||||||||||||||
Sbjct: 2569 actgttttgtcagatggtagagtgatggctggagaggtcatcacttctgcaatcttcgtc 2628

                  
Query: 371  cttgac 376
             |||||
Sbjct: 2629 tttgac 2634
to top
>gb|AC130222.4| Mus musculus BAC clone RP23-18K19 from chromosome 12, complete sequence
          Length = 218608

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 470   tgtccttcaacctccaccagtgc 492
             |||||||||||||||||||||||
Sbjct: 45611 tgtccttcaacctccaccagtgc 45589
to top
>gb|AC122227.4| Mus musculus BAC clone RP23-131H10 from chromosome 12, complete sequence
          Length = 208332

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 470    tgtccttcaacctccaccagtgc 492
              |||||||||||||||||||||||
Sbjct: 193011 tgtccttcaacctccaccagtgc 192989
to top
>gb|AC037492.5|AC037492 Homo sapiens chromosome 8, clone RP11-38H17, complete sequence
          Length = 168278

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 80     aaacacttttacatctatagga 101
              ||||||||||||||||||||||
Sbjct: 101167 aaacacttttacatctatagga 101188
to top
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 551     cggtgctgatcgccggcgtg 570
               ||||||||||||||||||||
Sbjct: 2707464 cggtgctgatcgccggcgtg 2707445
to top
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 422     catcggcgggcgctgtcgac 441
               ||||||||||||||||||||
Sbjct: 1917126 catcggcgggcgctgtcgac 1917145
to top
>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome
          Length = 5928787

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 483     ccaccagtgcctggtccgct 502
               ||||||||||||||||||||
Sbjct: 3853662 ccaccagtgcctggtccgct 3853643
to top
>ref|XM_841417.1| Trypanosoma brucei TREU927 hypothetical protein (Tb927.1.4760)
            partial mRNA
          Length = 3087

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 268  tctgtggatcttcttcttga 287
            ||||||||||||||||||||
Sbjct: 1378 tctgtggatcttcttcttga 1397
to top
>emb|AL591793.1|SME591793 Sinorhizobium meliloti 1021 complete chromosome; segment 12/12
          Length = 273785

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 546    cccctcggtgctgatcgccg 565
              ||||||||||||||||||||
Sbjct: 131917 cccctcggtgctgatcgccg 131898
to top
>gb|AC018738.4| Homo sapiens BAC clone RP11-419H23 from 2, complete sequence
          Length = 178530

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 279    tcttcttgagcatcagagct 298
              ||||||||||||||||||||
Sbjct: 171536 tcttcttgagcatcagagct 171517
to top
>ref|XM_815829.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053504153.290) partial mRNA
          Length = 1866

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 526  catggcctcgcgcaggagcg 545
            ||||||||||||||||||||
Sbjct: 1590 catggcctcgcgcaggagcg 1571
to top
>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 511     cagcacgggcgtcgacatggcctcgcgc 538
               |||||| |||| ||||||||||||||||
Sbjct: 2872530 cagcactggcgacgacatggcctcgcgc 2872557
to top
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete
             sequence
          Length = 3173005

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 422   catcggcgggcgctgtcgac 441
             ||||||||||||||||||||
Sbjct: 75837 catcggcgggcgctgtcgac 75856
to top
>gb|AC073576.23| Homo sapiens 12 BAC RP11-363M20 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 180309

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 466    gaagtgtccttcaacctcca 485
              ||||||||||||||||||||
Sbjct: 146928 gaagtgtccttcaacctcca 146909
to top
>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 422     catcggcgggcgctgtcgac 441
               ||||||||||||||||||||
Sbjct: 2567233 catcggcgggcgctgtcgac 2567252
to top
>gb|AF131950.1| Human papillomavirus candHPV85, complete genome
          Length = 7812

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 63   tttgcgatacaggctacaaa 82
            ||||||||||||||||||||
Sbjct: 3734 tttgcgatacaggctacaaa 3753
to top
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 553     gtgctgatcgccggcgtggg 572
               ||||||||||||||||||||
Sbjct: 3041412 gtgctgatcgccggcgtggg 3041393
to top
>gb|AC008750.9| Homo sapiens chromosome 19 clone CTD-2616J11, complete sequence
          Length = 143045

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 36    gctctcctaaatgctcccag 55
             ||||||||||||||||||||
Sbjct: 76812 gctctcctaaatgctcccag 76793
to top
>gb|AE004451.1| Pseudomonas aeruginosa PAO1, section 12 of 529 of the complete genome
          Length = 10700

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 193  ggcctccaacgcgcgaagaacgtcatcg 220
            ||||| ||| ||||||||||||||||||
Sbjct: 2227 ggcctgcaaggcgcgaagaacgtcatcg 2200
to top
>emb|AL355916.2|CNS05TD1 Human chromosome 14 DNA sequence BAC R-47I22 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 178484

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 466    gaagtgtccttcaacctcca 485
              ||||||||||||||||||||
Sbjct: 135650 gaagtgtccttcaacctcca 135631
to top
>dbj|AP002347.3| Homo sapiens genomic DNA, chromosome 11q, clone:CTD-2514A21, complete
              sequence
          Length = 130977

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 133    acatatttacagatccacaa 152
              ||||||||||||||||||||
Sbjct: 119986 acatatttacagatccacaa 119967
to top
>dbj|AP000790.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-736I10, complete
             sequence
          Length = 176944

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 133   acatatttacagatccacaa 152
             ||||||||||||||||||||
Sbjct: 30122 acatatttacagatccacaa 30103


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,248,988
Number of Sequences: 3902068
Number of extensions: 4248988
Number of successful extensions: 68445
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 68027
Number of HSP's gapped (non-prelim): 410
length of query: 610
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 587
effective length of database: 17,143,297,704
effective search space: 10063115752248
effective search space used: 10063115752248
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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